Bhi01G000176 (gene) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATCCTATGAAAATTTCCCTCAATTTTAACGTAAACAATTTAGGCGGCAGTAGCTCTGTGCGCACGAGGAAACTCCACTCCTTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCGATCTCCGCCACGCTGCGTGGTAAACTGATTTCATCAGGCTATACTACTCTCTCCTCTCTCGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGGTATCATCGCTCTCCTTCTCGCACCAACGATCTTCTTCTTCAACTTCTATTTTCGCTTCAAAATTTCAAATTCTATGGTTTGCCGTTTGTTCTCGATCTTTGTACACGTGTCGTTTTTCTATATTTGTGTGTCTTTTCTACTTGTATGATCTAATCCGATGCATGGGTTTTTTTTATCAAGGAAGTTGAAATTAGAAAAGACACGGATGAATTTTCATTGCATGAAAGTTTAACCTCTTAAGCAAATTTTTTAGGAGAAGAAACATTCGGCGATTCTGAACAGGACTTGAAATAGGAAACAACCATTAGAGTTTCAAATTGTGGTAATAAAGGAATACTTGTAATATCAAACACAATCTTCTGAGATTAGATCCTTTGACTGTCTTAATGATGTTAATTGCAACTATTGTTACATGATTCTCAGACTTGTGGACTGGATTAGATTTGTGTTGAGTTTCGGACGAAAATTAATTTTATATACGTGTATGTTCCTGTTGGAATTAATCAAACAGTTTTGATGACCAAAACTATATAGCATTGGTTAGTTCTTCGTTCCTTTTACTATATTTTTAAGGCTAGGTATTTCAAAAGTTGTTATTGTTGGTCCTTCTAAATTAAAGAGGATGTTTCTTCAACTTTAACTACCTTCTCTGATTGTGTTTTAGTATTTAGTAAGAAATGTCAAGCAGTCAATCTTTTCTGCCTCAAAAGGAAGTTATTTGGACTTTGAATCTTCTCGACCTCCCTTGTTAAATCAAACAAATAATGTAGCATTTCTTTGATCTTAAATTATGATTGGACAGAAACATGGCTTTTTCTTCATTATTAGTAACCCAAGACTCACGCACTTTAGCTTATTTGCAGTAACAAATTTTCTTTAGAATGACCTTGTCTCGGGGGGGTTTGCCCGTTATCGTGCTGTAATTTATATTATGTGTTTCTATTGATTTTATCTATTTACTTATACCTTTCCTACTCGATTTAATCGATCTTGTTATTTTAGTTTTTACTTTGAATCCTTGTCTTTGGATGTTGAGGGTTTCTAACAAGCCTTCTTTTGTGATTTAGAACTGGAAATCTCGAACAATGAAGCTTTTGAAGTTCTCAAGTTTGCGTCACATGGTAGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTACATTTTCCTCTTTGCTTAGTTTATTTTTTGAAAGGAAAGAAAGAAGAAAACTGTGAACTGTATGACTTATGGAATCAAGCATATGCTGCATATGGTTTGTTTCAAATGTCATCACTTTATTTGATCTGAAATTTCTTCTTCTAAGATGAGTATTTATTTTACTCCAAATAAACGTAGATAACTCGAGGAATAGACAAAACTGGCTCTTTTCTTTCATTTGTTTTTTCTTTTTCTTTTTTGTTTTTTTAATTTTTTTTTAATTTTTTTTAAGTGACAATTTCTCATAGGTATGTTCCATTTAAATGAAACTTCAACTGTGTTTTATATAAATAATATATTTCTTTTAATTTCTAACTTATCCTATAGTGGCTTACTTCCATAAATTGGTAATGATATATTTGTGCGCATCTGGTTTCTTCTGCAAAGGAATTTTTTTCCTTATTGAACCAATGTTATGAGTTTCTATCTATTATCCCCTGAATTTATATGGAAAATTGTTTATCGAAAGTGTAAATATCTTATGATATACCTTGATGTGCTCATTTACAATGGATTAGCTGCTTTAAAAGTTAATATAGATGTACTATCGGTCAACTCATTGATGTATATCTTTTTTGTATGTCTTTACATTACTTCCATATTTAATTATTTTCTAATTGTAATTATATTATCGTCAAGTTAGTTCTGATCAATACATGTAATTTCAAATATCTAATTTGATTTCTTATCTTGTACAGGTGCGGAGACAGCTTGGGACATGCTCCACAAAGAGCAGTTCATTTCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATCGGTTTGTGAGCATTATCCTTTCTTCTGGTCAGCTGTATTTTTATGTATATTGAGTACATTGTTTTGTCCCCTTTACTTAAAGAATAATGCACATTATTTTTTATTTATAATATAATGTCAACTCATGTTCTGTTACTATTCTTCTAGCAATATGAGCATTTAAAAAAAATCTCTTTCTTTATGCCAGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGGATTTTTGTTATATGTTTCTTTCCCAGTATGAAAATGTTTCTTTATTGGTAAGAAATAAAATGTCTCGATCTTTGCTTGCATTGAGTAACAGGATTCAACTTGCTGTAAATGTCCAAATTCCAGGCGCATTTGGTGGCGTAGGTGGAAAAGCAGTTTATATAGGTAAGTTCCCTTCCAGATTTTGCTCCCGGTTCTTTTAGACATTTTTGCTAGCAATCTATAATTGCAATCTAGTCAGAGACGTGGCTTTCCTTGATTTCTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGACTACAGTATCTTACTAAAGAAGAATGCAATACCGCATCAAATTCAAATGGAACCAAAAGATATCTTGAAAAACATATATTATTTTCGTGTCTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTAAGTAGATCTTTCGTTCTCTTAAAATTTTTGTCAGTGTCTAGTCAAATAATACGGATATGTATAGTTCCCTCGTCTTTCAAGTTTATCTTGTATTACATTACTAAAGGATGCCATGTTACTTGGAAGCTTTATTCTTTTGTCTGGAGTACGTTGTTGCTTTTCTTGATTTGGATATTTATAACCAATTTTTTTTTCTGAATTAAATGATTTTTTTTGTTTTTTTTACATCTTGTTTGTCGGCCTTCAGTTTGAGTATTTTGAAAATTACTGATTATTTCTTTGCAGGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCCCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTAAGAATCAATCATTATTATAATGTTTCAAACTGACTCGTATATATGATGGGGTATCAACTTAGTATTAAATTGATATGAATAGGAGCTGCTTTATAGTTAATTGTCAAAAGCGTCATCTTCCTTGCAGTTGATGAGTTCCACTGACCTCCATTTGGTTGATAAGCAAAGAAAATCCACTGGCCTTGAATGTGTATTTAACTTTAAGCTAGGATATTGAATAAGTTATATATATATATAAAAGCAATGACTTTCATTGAGAGAAAAATGAAAGAATATAAGGACATACAAAAAGCCAAGCTCACAAAATCCCCTTCTCTTGAGAAAGTAAAAAATTTGCTTAAAGAATCATTACAAAATGTCTTCGAAATCAAAGTCCAAAGGGAAATATGAAACTTCATCAAGGTCCAAACATCACCGGGATCCCTTTCCATCCCATATCCCCACAAAACTCTTAACTCTGTTGTTTCTCTTCCAAAGGGAAAGTGAAGTTTTATATATACAATTTGGCTCGGGGAAATAACAGAAATCACTGTATTTGATTAATAAACTTTGAATTTCTGAACATCACATTACATTTGAAACGTTTAGAAATATTTGCTTTTTACATTTTTTTAACATAAGGTTCAGCATGATATATGTAAATCATTTAAATGGATGAAAAATTCATCTATTTGAATTTTGAAGAAAATATATTTAAGTAGATAATGTTCTTCCCTATGCTCCTTCAATATCATGTCAATATTCTGAATGTGAATCTTTTGTACTTTCTTGTTTAATTCATGCTACTAGTAACTTTAATTGTTGCATCTTACTTCTAATCTAATGTTTTCCCCCTGCCTTTGCTGCTCCTTTGTCCTTTTTTCTCCAACCCCGTGGCAGGTCGTTCTATTTAATCAGGTGACAACTAAGTTCGCTGAAGGTTCATTTCAATTAACTCTTGCTTTGGGTATGTCCTTTTAAGTCACCCCTTACCTTCCTCTGTTAAAAATCATTGTTGACATTATCCTTTTAAGCGTTATGATTCCTTTGAACTAATTAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACAGCGATGAAAGATACGCATATCTTGAGAAGTCGCCCTCTCTTCGATCTGCATCAGCACCTTATTCTGTGACTTTTAGAGGCATCAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATGTAAGATTTGAAATGCCTTTAAAGCTCACATGAATTCCTCTTGTTCTCACGCTTCATC TTATCCTATGAAAATTTCCCTCAATTTTAACGTAAACAATTTAGGCGGCAGTAGCTCTGTGCGCACGAGGAAACTCCACTCCTTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCGATCTCCGCCACGCTGCGTGGTAAACTGATTTCATCAGGCTATACTACTCTCTCCTCTCTCGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTTGAAGTTCTCAAGTTTGCGTCACATGGTAGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTGCGGAGACAGCTTGGGACATGCTCCACAAAGAGCAGTTCATTTCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATCGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAACTTGCTGTAAATGTCCAAATTCCAGGCGCATTTGGTGGCGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGACTACAGTATCTTACTAAAGAAGAATGCAATACCGCATCAAATTCAAATGGAACCAAAAGATATCTTGAAAAACATATATTATTTTCGTGTCTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCCCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTCGTTCTATTTAATCAGGTGACAACTAAGTTCGCTGAAGGTTCATTTCAATTAACTCTTGCTTTGGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACAGCGATGAAAGATACGCATATCTTGAGAAGTCGCCCTCTCTTCGATCTGCATCAGCACCTTATTCTGTGACTTTTAGAGGCATCAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATGTAAGATTTGAAATGCCTTTAAAGCTCACATGAATTCCTCTTGTTCTCACGCTTCATC ATGGAGGTCGGGAGGTTACCGATCTCCGCCACGCTGCGTGGTAAACTGATTTCATCAGGCTATACTACTCTCTCCTCTCTCGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTTGAAGTTCTCAAGTTTGCGTCACATGGTAGTGGGCTGGACAGGTCAGACGGGAGTGGTGCTATTGTTAATGGTGCGGAGACAGCTTGGGACATGCTCCACAAAGAGCAGTTCATTTCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATCGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAACTTGCTGTAAATGTCCAAATTCCAGGCGCATTTGGTGGCGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGACTACAGTATCTTACTAAAGAAGAATGCAATACCGCATCAAATTCAAATGGAACCAAAAGATATCTTGAAAAACATATATTATTTTCGTGTCTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCCCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTCGTTCTATTTAATCAGGTGACAACTAAGTTCGCTGAAGGTTCATTTCAATTAACTCTTGCTTTGGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACAGCGATGAAAGATACGCATATCTTGAGAAGTCGCCCTCTCTTCGATCTGCATCAGCACCTTATTCTGTGA MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSGLDRSDGSGAIVNGAETAWDMLHKEQFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSILLKKNAIPHQIQMEPKDILKNIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALAGHTLARIGSFYIGTAMKDTHILRSRPLFDLHQHLIL
BLAST of Bhi01G000176 vs. TAIR10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C) HSP 1 Score: 387.5 bits (994), Expect = 8.1e-108 Identity = 203/312 (65.06%), Postives = 249/312 (79.81%), Query Frame = 0
BLAST of Bhi01G000176 vs. TAIR10
Match: AT3G22880.1 (DNA repair (Rad51) family protein) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-24 Identity = 85/233 (36.48%), Postives = 121/233 (51.93%), Query Frame = 0
BLAST of Bhi01G000176 vs. TAIR10
Match: AT5G20850.1 (RAS associated with diabetes protein 51) HSP 1 Score: 92.0 bits (227), Expect = 7.0e-19 Identity = 79/265 (29.81%), Postives = 127/265 (47.92%), Query Frame = 0
BLAST of Bhi01G000176 vs. TAIR10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3)) HSP 1 Score: 89.7 bits (221), Expect = 3.5e-18 Identity = 67/212 (31.60%), Postives = 107/212 (50.47%), Query Frame = 0
BLAST of Bhi01G000176 vs. TAIR10
Match: AT2G28560.1 (DNA repair (Rad51) family protein) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-09 Identity = 59/274 (21.53%), Postives = 110/274 (40.15%), Query Frame = 0
BLAST of Bhi01G000176 vs. Swiss-Prot
Match: sp|Q8GXF0|RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=RAD51C PE=1 SV=2) HSP 1 Score: 401.7 bits (1031), Expect = 7.5e-111 Identity = 203/288 (70.49%), Postives = 250/288 (86.81%), Query Frame = 0
BLAST of Bhi01G000176 vs. Swiss-Prot
Match: sp|Q8R2J9|RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus OX=10029 GN=RAD51C PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 9.0e-56 Identity = 128/291 (43.99%), Postives = 185/291 (63.57%), Query Frame = 0
BLAST of Bhi01G000176 vs. Swiss-Prot
Match: sp|Q924H5|RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus OX=10090 GN=Rad51c PE=2 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 6.5e-54 Identity = 122/286 (42.66%), Postives = 183/286 (63.99%), Query Frame = 0
BLAST of Bhi01G000176 vs. Swiss-Prot
Match: sp|O43502|RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens OX=9606 GN=RAD51C PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53 Identity = 126/286 (44.06%), Postives = 178/286 (62.24%), Query Frame = 0
BLAST of Bhi01G000176 vs. Swiss-Prot
Match: sp|Q54PJ7|RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum OX=44689 GN=rad51c PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.9e-38 Identity = 86/193 (44.56%), Postives = 125/193 (64.77%), Query Frame = 0
BLAST of Bhi01G000176 vs. TrEMBL
Match: tr|A0A0A0L3U2|A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126250 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 2.6e-148 Identity = 277/288 (96.18%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of Bhi01G000176 vs. TrEMBL
Match: tr|A0A1S3AWE4|A0A1S3AWE4_CUCME (DNA repair protein RAD51 homolog 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1) HSP 1 Score: 531.2 bits (1367), Expect = 1.7e-147 Identity = 276/288 (95.83%), Postives = 284/288 (98.61%), Query Frame = 0
BLAST of Bhi01G000176 vs. TrEMBL
Match: tr|A0A1S3AVR1|A0A1S3AVR1_CUCME (DNA repair protein RAD51 homolog 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 2.0e-145 Identity = 276/295 (93.56%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Bhi01G000176 vs. TrEMBL
Match: tr|A0A1S4DSI5|A0A1S4DSI5_CUCME (DNA repair protein RAD51 homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 1.6e-142 Identity = 274/295 (92.88%), Postives = 282/295 (95.59%), Query Frame = 0
BLAST of Bhi01G000176 vs. TrEMBL
Match: tr|A0A1S4DSG8|A0A1S4DSG8_CUCME (DNA repair protein RAD51 homolog 3 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103483364 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 2.0e-129 Identity = 253/295 (85.76%), Postives = 260/295 (88.14%), Query Frame = 0
BLAST of Bhi01G000176 vs. NCBI nr
Match: XP_004133923.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus] >KGN56610.1 hypothetical protein Csa_3G126250 [Cucumis sativus]) HSP 1 Score: 533.9 bits (1374), Expect = 3.9e-148 Identity = 277/288 (96.18%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of Bhi01G000176 vs. NCBI nr
Match: XP_008438178.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X3 [Cucumis melo]) HSP 1 Score: 531.2 bits (1367), Expect = 2.5e-147 Identity = 276/288 (95.83%), Postives = 284/288 (98.61%), Query Frame = 0
BLAST of Bhi01G000176 vs. NCBI nr
Match: XP_008438177.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo]) HSP 1 Score: 524.2 bits (1349), Expect = 3.1e-145 Identity = 276/295 (93.56%), Postives = 284/295 (96.27%), Query Frame = 0
BLAST of Bhi01G000176 vs. NCBI nr
Match: XP_011650791.1 (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 524.2 bits (1349), Expect = 3.1e-145 Identity = 275/288 (95.49%), Postives = 281/288 (97.57%), Query Frame = 0
BLAST of Bhi01G000176 vs. NCBI nr
Match: XP_022944720.1 (DNA repair protein RAD51 homolog 3 isoform X3 [Cucurbita moschata]) HSP 1 Score: 519.2 bits (1336), Expect = 9.9e-144 Identity = 265/288 (92.01%), Postives = 281/288 (97.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |