CmoCh06G011690 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G011690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNA repair and recombination protein RadA
Location	Cmo_Chr06 : 8962585 .. 8967187 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCGTCTTTTCACAACTGGTAAAAAAAGAAACAGTTTTTGAAAGGGGTCTTTCTCCAAATTCAAAACATTTAGAGGCTATTTTTCTAAAATTACCCCTGCGCGCGCCGTAGAAACCTCACTCCTTTCATTTTATCGGCGATAGCCGATAGTGTTACTCGGAGATACGGAGAGAAACCAGATATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGGTATCATCACTTTCCTTTTCTTTTGATTGAACTTCCTGTTCAACATCTGTTTTCGCTTTAAATTCTTAGGTTTTCCGTTTTCTTTGGATTTTTATTCATATGTCATCGTTCTGTGTGTGTTCTTGTTTTTTTTACCACTGGTGTAATATAATCCGACGCACGAGTTTGTTTAAAGGAGGTTGAAATTAGCCATTTCAGATCATTCGACCACTAGGATGAATTTTATAAGAGAAAAAACATTCGGAAATTTCGAAGAGAACGAGAAATAGGAAACGACTCTTCGAGCCTTGAATTGTGGTAATGAATGAATATATTGTGATAATCAATCCGTAATCTCCTGAGTAGATCTTTTGACTTATGACTGTTGTTAATTTGAATTTCTGTGGCATAAATATAAAAAAGACTCAATGGATTAGATTAGATTTATGTTGAATTTTGGACCTCAAGGAATTTTATGACTCCGTAGGTTCCTGTTGGAATTTATTAAACAGTTTTAATGACCAGAACTAGCTGCAGCATTGGTTCATTCTTCCTTTTGCTATATTTCAAGGCTAGATAATTTGAAATGTTTTCATGCTTGCATGCATACATCTTGTTATTATTGGTCCTTCAATTTGAACCACCTTCTCTGGCAGTGATTTAGAATTGAGTATGAGATTTTAATCAATCAATCTTTTCTGTCTCGAAAGGTTCTATTTCAGCTTCAATCTTCTCAACGTCCCTTGTTTAAACAAGCAAACAATGTAAATTCCTTTGATCTTAAATAATGATGGGACGGAAGCATGAATTTTTCTTCATTATCAGTAACCCAAAAATCCACTCACTTCAGCTTATTTGCGGTAATAGTTTTTCTTGAGAAGTAGCTTGTCTCAGGGTTTTCTTTTCTTGTTATCACGAAATGATAAATCTTGTGTATTTCTCTTCATTTCATCTATTTACTTATTTTCACCCTTTTCTGTTCAATTTCATCGGTCCTGTTACTTTAGTTTTCACTTTCATTGTCTGTGAATGTTGAGGGTTGCTAACAAGCCGTCTCATGTGATTCAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTACAGTTTCCTCTTTGCGTAGCTTATTTATTGAAAGCAACAGTAAGAAGAAAACTGTGAACTGTGTGACTTATGAAATAAAAAATAAGGTGCACGTGATTTGTTTTTTAATGCCATCCCTTTGTTGGATCTGGAAGTTTCTTCATTAAAGATGAGTACTTCATAGTTTGCTCAAAATAGATGTAGTTATCTAAATGAATAGACAAAATTGGCTCTTTTCTTTCTTTTTTTCTTCATTTTTAATGACAATTTTTTCATATGTATGTTCCTTTTTATGAAGTTTCAACTGTGTTTTAGATAAAAAAAATAAAACTGCTACTGTTAACTTATTCACAGAGTGGTTTACTTCCATTAATTGGTTATGATGTATTTGTGTGTATCATGTTTCTTCTGCCAAGCAATTTCTTCCTTATTGAATCATCTCATTAGTTCCAATCTTCTCAAAGATCAAAAATACTTTATCAAAAGTGCAGGTATCTTATGGTATACCTTGATATGTTCATTTACTATCACATAGTTGTTTAATAGATTAATGTACTATTGATTGGTGGTTATCCTTTTTTTGGTCTGTTTAAAATACTTCCACATCTAATTACTTCATTATTTTCTAATTATTATTAATATATCGTGGAACCAGCTCTGATCAATCCATGTAATTTCAAATATCTATTTTGGAATTCTTATCTAGGACAGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTTAGTGATTGTTATTCTCTCTGGTCAGTTGCATTATTACGTGTAATGAATACATTATATTCTCCCCTTTATTTTCTGAAGAAACATGCACGTTAGAATGGAATGTCAACTCATGTTCTCGATTGAAATATCTTAATCTCGCCCTTTTTTGTTTGAATGTCAACTCATGTTTTATTATTATGCTTTTAGTAGAGATATAATCATTTTATTTATTTATTTTTGCCAGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGTATGGATTTTTGTTGTATGTTTCTCTCCCAGTGTGAAAATTATTCTTTGTCATACAGAAATAAAATGACATAATGTTTATTTTGCATCGAGTAACAGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGGTAGGTTTCCATTCCAGATTTTGCTTCCAATGCTTTTGAAATTTTTTCTAGCAATCTATATTTGCAATCTAGTTAGGAACATGGCTTTCCTTGATGTTTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTAGGTAGAATTTTCTTTAACTCTTTAAACTATTATCACTGTCTAGGAAAAGAATTCAGATACGTGTAGTTCTCTTGTCGTTCGAGTTTCTTGTATTACATTGCTTAATCGTTAATGATGCTGCTTGGAAGCTTTCTTCTTTTGTCTCAAGTAAATTGTTGTTTTTCTTGATTTGGATATTTCTAACCAAAAAGTTATCTGAATTACAATTTTTTTTCCTAGATCTTCTTTGTTGGCCTTCAGTTCAAGTATTTTGATAATTACTGATTATTTCTTTGCAGGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTAAGAATCAGTTATCTCATTATAATGTTTCAAACTAACATATATGGTAGAGTGTCAACTTAAATTGACATAAGTAGTGATTTACAAAGTTGAATGTGTCTCAACTTTATTAGCAAGCATGGACACTTTAAACTAGCACATTGAATAAGTTATATATATATATATATATATATATATACACACACACACACAGACAATTTGACTCGTGGGAATAACAAAAATCAGTGTATTTGACTAATAAACTTCGAATTGCTCGATATCATGTCACATTTAGAACGTGTTGAAATATTTTGAATTCTCAATACATTTTTTCTAATACAAGATTCAGCATGATACAAGTAAATCATTTAAATGGATGAGAAATCCATATCTTTGAAGAAGATATTTTTCTTCCTATGCCCCTTTCATATCATGTCAATATCCTGAATTTGCATCTATACTCAACCAATGCTGAGAGAAACACACATATGCTTGGTTGTGTCACTTTACCGTTTTTATTTTACGTATCATTTTCCTCCTAATTTCTTGTTTCATTCATGCTAGTAGTGACTAATTTGTTCTATTGTTTTTCCCCCGTCTTTGTTGCTTTTTTCTCCTCTTTTCTCCAACTCTTCGGCAGGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTATGTCATTTTTAAGTCTCCTCTTATCTTCCACTGTTAAAAATCATTGTTGATCTGTCACTTGTTGCACCCCCTTGGATGTCTTTAAGCATTCTGATTCCATTGAGTTGATTAGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACGCCTTTAAAACTCACATGAATTCATGTTGTTCTCTCATGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGTCCCTTTTTGTTGAAAGATGCGTATATTTATGTTCTTGCTGCCGTTGGAATCTTTTTCATAAATTTTTTCTTTAGCCG

mRNA sequence

TTCGTCTTTTCACAACTGGTAAAAAAAGAAACAGTTTTTGAAAGGGGTCTTTCTCCAAATTCAAAACATTTAGAGGCTATTTTTCTAAAATTACCCCTGCGCGCGCCGTAGAAACCTCACTCCTTTCATTTTATCGGCGATAGCCGATAGTGTTACTCGGAGATACGGAGAGAAACCAGATATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAAAGATTTGAAACGCCTTTAAAACTCACATGAATTCATGTTGTTCTCTCATGCTTCATCTAATTTAAGTATGGAATTATCTGAATGGTTCTTGGTTCTTTCTATGATATGGGAAATTGAAAGTTGTCCCTTTTTGTTGAAAGATGCGTATATTTATGTTCTTGCTGCCGTTGGAATCTTTTTCATAAATTTTTTCTTTAGCCG

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTGCCGATATCCGCTACGCTTCGAGGTAAACTGATTTCAGCAGGCTATACTACTCTCTCCTCTCTTGCTTCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGAACAATGAAGCTTTCGAAGTTCTTAAATTTGCATCACATGGCAGTAGGCTGGACAGGCCAGACGGGAGTGGTGCTATTGTTAACGGTGCAGAGACTGCTTGGGATATGCTCCACAAAGAGCAGTTACTGCCACGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGGATTAATAGCAGTGAGGTTACGGAAATTGGTGGGGTACCGGGTATAGGTAAAACACAGCTTGGGATTCAACTTGCCGTAAATGTTCAAATTCCAGGTGCATTTGGTGGCTTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCTGTGCAGATTGCTGAAGCATGTATAGAAGATATGACAGATTACAGTGTCTTAGTAAAAAAGAATGCAACGCCTCATCAAGTTCAAATCCAACCAAAAGATATCTTGGAAAACATATTTTACTTTCGTGTCTGCAGCTATACAGAGCAAATTGCCCTAGTAAATTATCTGGACAAGTTCATTACGGAGCACAAAGATGTTAAGGTTATCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGACGACTTGGCTCTCAGGACACGGTTACTCAGTGAAATGGCTCTTAAGTTAATGAAGCTGGCCAAGAAGTTTAATTCGGCCGTTGTTCTATTGAATCAGGTCACCACTAAGTTCGCCGAAGGTTCATTCCAATTGACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAACCGGATCATTTTATATTGGAATGGCGATGAAAGGTACGCGTATCTTGAAAAATCGCCCTCTCTTCGATCTGCATCGGCACCTTATTCTGTGACTTGTAGAGGCATTAGAAATTCTACATCAAGTAATAAGAGAACCAAAATGATCTAA

Homology

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BLAST of CmoCh06G011690 vs. Swiss-Prot
Match: RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2)

HSP 1 Score: 508.4 bits (1308), Expect = 6.0e-143
Identity = 254/346 (73.41%), Postives = 305/346 (88.15%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I+  EAFE+LK A+      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSCC-- 81

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
             +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLDN+LGGGI+  +VTEIGGVPGIGKT
Sbjct: 82  --NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           Q+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVERA+QIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
            +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KFI+E+KDVKV+IVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS+SS+KR KM+
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

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BLAST of CmoCh06G011690 vs. Swiss-Prot
Match: RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.6e-71
Identity = 149/349 (42.69%), Postives = 225/349 (64.47%), Query Frame = 1


Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  PDGSGAIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 121
           P  +GA V G + TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 181
           QL +QLAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +  + +       
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHL--HLIAGTHKDE 183

Query: 182 PHQVQIQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQ 241
            HQ  ++    ++IL +I+YFR   YTE +A V  L  F++ H  V+++I+D +   FR 
Sbjct: 184 EHQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

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BLAST of CmoCh06G011690 vs. Swiss-Prot
Match: RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.1e-69
Identity = 146/346 (42.20%), Postives = 222/346 (64.16%), Query Frame = 1


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSG 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  -AIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
            ++ N   TA ++L +E     I T C+ LDN+LGGGI   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +     L+    T  + Q
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHLH----LIAGTHTEEEHQ 188

Query: 187 IQPKD-----ILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 246
              KD     IL +I+YFR   YTE +A V  L  F+++H  V+++I+D + F FR + +
Sbjct: 189 KALKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLE 248

Query: 247 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 306
           DL+LRTRLL+ +A +++ LA     AV+L NQ+TTK  +    L  ALG+SW H+ T R+
Sbjct: 249 DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRL 308

Query: 307 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS--TSSNKRTK 345
           I +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 IFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

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BLAST of CmoCh06G011690 vs. Swiss-Prot
Match: RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.5e-66
Identity = 140/334 (41.92%), Postives = 208/334 (62.28%), Query Frame = 1


Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSG 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+        ++P  +G
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRECLTNKPRYAG 77

Query: 67  AIVNGAE-TAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQ 126
              +  + TA ++L +E     I T C+ LD++LGGG+   + TEI G PG+GKTQL +Q
Sbjct: 78  TSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQ 137

Query: 127 LAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQ 186
           LAV+VQIP  FGG+ G+AV+IDTEGSFMV+R V +A ACI+ +    +  K     H+  
Sbjct: 138 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHRKA 197

Query: 187 IQP---KDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 246
           ++     +IL +I+YFR   YTE +A V  L  F++EH  V+++IVD + F FR + DDL
Sbjct: 198 LEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDL 257

Query: 247 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA     AV+L NQ+TTK       L  ALG+SW H+ T R+I 
Sbjct: 258 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLIF 317

Query: 307 YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 HWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

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BLAST of CmoCh06G011690 vs. Swiss-Prot
Match: RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-51
Identity = 107/250 (42.80%), Postives = 160/250 (64.00%), Query Frame = 1


Query: 88  ITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYID 147
           I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GG+ GKA+YID
Sbjct: 64  IITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYID 123

Query: 148 TEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQI 207
           TEGS+  +R  ++A   +  +    VL+K   T        + +L +I+Y+RV  Y E I
Sbjct: 124 TEGSYSCQRVREMATHLVNHLE--CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEII 183

Query: 208 ALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAV 267
           +L++ L  F+ ++KDVK+I+VDS+T+ FR +F D+ LRTR L  +A  LM +A ++N AV
Sbjct: 184 SLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAV 243

Query: 268 VLLNQVTTKFAEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAP 327
           V++NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S   P
Sbjct: 244 VVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSCFTP 303

Query: 328 YSVTCRGIRN 336
           + +   GIR+
Sbjct: 304 FDIVEYGIRD 311

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BLAST of CmoCh06G011690 vs. TrEMBL
Match: A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 3.6e-179
Identity = 321/346 (92.77%), Postives = 335/346 (96.82%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF+VLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]

BLAST of CmoCh06G011690 vs. TrEMBL
Match: D7U7X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.2e-147
Identity = 267/346 (77.17%), Postives = 309/346 (89.31%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           ME+ RLPISA+ RGKLISAGYT+LSSL+S+SPS LA++L+IS+NEA E+L+  S GSRLD
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           +PDGS AIVNGA+TAWDMLH+E+ L  ITTSC DLD++LGGGI   EVTEIGGVPGIGKT
Sbjct: 61  KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  +GGLGGKA+YIDTEGSFM+ER++QIAEACIEDM+  S  ++K+  
Sbjct: 121 QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+ QPKD L+NIFYFRVCSYTEQIA++NYLDKFI+EHKDV V+I+DSVTFHFRQ+FD
Sbjct: 181 SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLMKLAKKF+ AVVLLNQVTTK  EGSFQLTLALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSLRSASAPYSVT +GIR +TS  KR K++
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346

[Close]

BLAST of CmoCh06G011690 vs. TrEMBL
Match: W9RJ62_9ROSA (DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 5.2e-146
Identity = 262/346 (75.72%), Postives = 307/346 (88.73%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISA+ RGKLI AGYTTLSSL+S+SPSDLAREL ++N+EA E+LK AS  SRLD
Sbjct: 1   MEVGRLPISASQRGKLIRAGYTTLSSLSSLSPSDLARELNVTNSEALEILKVASLNSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DG  AI NGA+TAWDMLH+EQLL RITTSCADLDN+LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  RTDGGHAIFNGAQTAWDMLHEEQLLRRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP   GGLGGKAVYIDTEGSFMVERA+QIAEA + DM +Y+ L++K   
Sbjct: 121 QLGIQLAVNVQIPVDLGGLGGKAVYIDTEGSFMVERALQIAEASVLDMVEYNDLLRKEHR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV ++P D+LE+I+YFR+CSYTEQ+A+++YLDKFI+ HKDVK++IVDSVTFHFRQ+F+
Sbjct: 181 KCQVNLKPNDLLESIYYFRICSYTEQMAVISYLDKFISAHKDVKIVIVDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLM LAK +N AVV+ NQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMNLAKTYNLAVVIFNQVTTKYMEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGD+RYA+++KSPSLRSASAP+SVT +GIRNS S++KR K++
Sbjct: 301 ILYWNGDDRYAFIDKSPSLRSASAPFSVTGKGIRNSASNHKRIKLM 346

[Close]

BLAST of CmoCh06G011690 vs. TrEMBL
Match: A0A061E1X4_THECC (RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.6e-142
Identity = 259/348 (74.43%), Postives = 305/348 (87.64%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSR-- 60
           ME+ RLPISA+ RGKLISAGYTTLSSL+S+S SDLARE ++S +EA ++LKFASH     
Sbjct: 1   MEIWRLPISASQRGKLISAGYTTLSSLSSISSSDLARESKVSESEALDILKFASHSHSGG 60

Query: 61  LDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIG 120
            +   G+ +I  GA+ AWDMLH+E+ L  ITTS ADLDN+LGGGI+  EVTEIGGVPGIG
Sbjct: 61  WEMSSGNCSIFEGAQNAWDMLHEEESLVHITTSSADLDNILGGGIHCKEVTEIGGVPGIG 120

Query: 121 KTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKN 180
           KTQLGIQ+AVNVQIP  FGGLGGKA+YIDTEGSFMVERA+QIAEACIEDM++Y+  ++K+
Sbjct: 121 KTQLGIQIAVNVQIPHGFGGLGGKAIYIDTEGSFMVERALQIAEACIEDMSEYNRFIRKD 180

Query: 181 ATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQN 240
               ++++QPKDIL NIFYFR+CSYTEQIAL+NYLDKFI+EHKDVKV++VDSVTFHFRQ+
Sbjct: 181 FQACEIRMQPKDILGNIFYFRICSYTEQIALINYLDKFISEHKDVKVVVVDSVTFHFRQD 240

Query: 241 FDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTN 300
           FDD+ALRTR+LS MALKLMKLAKKF+ AVVLLNQVTTK  EGSFQL LALGDSWSH+CTN
Sbjct: 241 FDDMALRTRVLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLALALGDSWSHTCTN 300

Query: 301 RIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           RI+LYWNG+ERYAY++KSPSLRSASA YSVT RGIRNS+SS KR KM+
Sbjct: 301 RIVLYWNGNERYAYIDKSPSLRSASAAYSVTRRGIRNSSSSCKRIKMM 348

[Close]

BLAST of CmoCh06G011690 vs. TrEMBL
Match: M5X6P1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007713mg PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 2.1e-142
Identity = 262/358 (73.18%), Postives = 304/358 (84.92%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISA+ RGKLISAGYTTL+SL+S+S SDLAR+L+I  +EAFE+LK ASH  RLD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTTLASLSSLSSSDLARDLKIPESEAFEILKVASHDCRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           +PD S  I  GA+TAW+MLH+EQL PRITTSCADLDN+LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  QPDKSNGIFTGAQTAWEMLHEEQLFPRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  FGGLGGKAVYIDTEGSFMVERA+QIAEA + DM+ Y+ L+ K   
Sbjct: 121 QLGIQLAVNVQIPVDFGGLGGKAVYIDTEGSFMVERALQIAEASVVDMSHYNELLWKELR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+IQP DIL+NIFYFR+CSYTEQIAL+N+LDKFI EHKDVK++I+DSVTFHFRQ+F+
Sbjct: 181 TCQVEIQPTDILKNIFYFRICSYTEQIALINHLDKFILEHKDVKIVIIDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA------------VVLLNQVTTKFAEGSFQLTLAL 300
           DLALRTRLL  MALKLM LA K+N A            VV+ NQVTTK  EGSFQL+LAL
Sbjct: 241 DLALRTRLLGGMALKLMNLANKYNLAVSNMIASYSLWQVVIFNQVTTKHKEGSFQLSLAL 300

Query: 301 GDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           GDSWSH CTNR+ILYWNGDER A+++KSPSL+SASAP+SVT +GIRNS S++KR K++
Sbjct: 301 GDSWSHCCTNRVILYWNGDERNAHIDKSPSLKSASAPFSVTRKGIRNSASNHKRIKLM 358

[Close]

BLAST of CmoCh06G011690 vs. TAIR10
Match: AT2G45280.2 (AT2G45280.2 RAS associated with diabetes protein 51C)

HSP 1 Score: 494.2 bits (1271), Expect = 6.6e-140
Identity = 254/370 (68.65%), Postives = 304/370 (82.16%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISNNEAFEVLKFASHGSRLDRPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLD 120
               I+  EAFE+LK A+        +GS +++NGA+ AWDMLH+E+ LPRITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSCC----NGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVER 180
           N+LGGGI+  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GGLGGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 AVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKF 240
           A+QIAEAC+EDM +Y+  + K+   +QVQ++P+DILENIFYFRVCSYTEQIALVN+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVIIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTK 300
           I+E+KDVKV+IVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKF+ AVVLLNQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT RG+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]

BLAST of CmoCh06G011690 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-29
Identity = 98/277 (35.38%), Postives = 142/277 (51.26%), Query Frame = 1


Query: 68  IVN-GAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQL 127
           IVN G  T  D L K + + +ITT C  LD+LLGGGI +S +TE  G    GKTQL   L
Sbjct: 87  IVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTL 146

Query: 128 AVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQI 187
            V  Q+P    G  GK  YIDTEG+F  +R V IAE                    +  +
Sbjct: 147 CVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGM 206

Query: 188 QPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNF---DDLA 247
            P  +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA
Sbjct: 207 DPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELA 266

Query: 248 LRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSF---QLTLALGDSWSHSCTNRI 307
            R + L++M  +L+K+A++FN AV + NQV      G F       A G   +H+ T R+
Sbjct: 267 DRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRL 326

Query: 308 IL-YWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNS 337
           +     GD R   +  +P+L  A A + +T  GI ++
Sbjct: 327 LFRKGKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]

BLAST of CmoCh06G011690 vs. TAIR10
Match: AT5G20850.1 (AT5G20850.1 RAS associated with diabetes protein 51)

HSP 1 Score: 105.1 bits (261), Expect = 8.6e-23
Identity = 96/328 (29.27%), Postives = 153/328 (46.65%), Query Frame = 1


Query: 15  KLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRPDGSGAIVNGAET 74
           KL  AG  T+  +A     DL +   IS+ +  ++++ AS             +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVEAASK-----------LVPLGFTS 102

Query: 75  AWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  +  + Q + +IT+   +LD +L GGI +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPKDILEN 194
             GG  GKA+YID EG+F  +R +QIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFNSAVVLLNQVTTKFAEGSF-----QLTLALGDSWSHSCTNRIIL-YWN 314
               L KLA +F  AVV+ NQV  +  +GS      Q     G+  +H+ T R+ L    
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATTTRLALRKGR 337

Query: 315 GDERYAYLEKSPSLRSASAPYSVTCRGI 334
            +ER   +  SP L  A A + ++  G+
Sbjct: 343 AEERICKVISSPCLPEAEARFQISTEGV 337

[Close]

BLAST of CmoCh06G011690 vs. TAIR10
Match: AT5G57450.1 (AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 68/212 (32.08%), Postives = 108/212 (50.94%), Query Frame = 1


Query: 70  NGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQLGIQLAVN 129
           NG     ++L +     ++TT C  LD  L GGI+   +TEI    G GKTQL +QL++ 
Sbjct: 3   NGKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLC 62

Query: 130 VQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPHQVQIQPK 189
            Q+P + GGL G ++Y+ +E  F   R  Q++       ++ S+    N  P        
Sbjct: 63  TQLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP-------- 122

Query: 190 DILENIFYFRVCSYTEQIALVNYLDKFITEHK---DVKVIIVDSVTFHFRQNFD----DL 249
              +++F   V S      ++  +D F+   K    +K+I++DSV   FR  FD    DL
Sbjct: 123 --CDHVFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDL 182

Query: 250 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVT 275
             R+ L  +++ KL +LA KF+ A+V+ NQVT
Sbjct: 183 KKRSSLFFKISGKLKQLASKFDLAIVITNQVT 202

[Close]

BLAST of CmoCh06G011690 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 81/352 (23.01%), Postives = 142/352 (40.34%), Query Frame = 1


Query: 3   VGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLDRP 62
           +G + +   +     +    T     S++  +L   L++   E    + F S  +     
Sbjct: 6   IGEMGLHTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEATSPPCQ 65

Query: 63  DGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKTQL 122
                +    E        E L   + T    LD+ L GGI    +TE+ G PGIGK+Q 
Sbjct: 66  SARSLLEKKVEN-------EHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQF 125

Query: 123 GIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNATPH 182
            ++LA++   P A+GGL G+ +YID E  F   R +++      ++              
Sbjct: 126 CMKLALSASFPVAYGGLDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------F 185

Query: 183 QVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFDDL 242
            ++   +++   I   R  S       +  L   I +++ VK++++DS+T          
Sbjct: 186 HLKGMAQEMAGRILVLRPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPG 245

Query: 243 ALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTT----KFAEGSFQ--------------- 302
           A R   L      L  LA+     +V+ NQV +    + ++ SFQ               
Sbjct: 246 AQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYD 305

Query: 303 --LTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGI 334
             L  ALG +W+H+ T R++L     +R   + KSP     + P+ +T  GI
Sbjct: 306 SHLVAALGINWAHAVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]

BLAST of CmoCh06G011690 vs. NCBI nr
Match: gi|449432271|ref|XP_004133923.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 635.6 bits (1638), Expect = 5.2e-179
Identity = 321/346 (92.77%), Postives = 335/346 (96.82%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF+VLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]

BLAST of CmoCh06G011690 vs. NCBI nr
Match: gi|659075500|ref|XP_008438178.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 634.8 bits (1636), Expect = 8.8e-179
Identity = 321/346 (92.77%), Postives = 337/346 (97.40%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]

BLAST of CmoCh06G011690 vs. NCBI nr
Match: gi|659075498|ref|XP_008438177.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 1.1e-176
Identity = 321/353 (90.93%), Postives = 337/353 (95.47%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEISNNEAFEVLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R +GSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYIDTEGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PK+ILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSA-------VVLLNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKF+ A       VVL NQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           HSCTNRIILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRNSTSSNKRTKM+
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]

BLAST of CmoCh06G011690 vs. NCBI nr
Match: gi|778677460|ref|XP_011650791.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 626.3 bits (1614), Expect = 3.1e-176
Identity = 319/346 (92.20%), Postives = 333/346 (96.24%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEISNNEAF+VLK ASHG  LD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           R DGSGAIVNGAETAWDMLHKEQ +PRITTSCADLDNLLGGGIN SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIPGAFGG+GGKAVYI  EGSFMVERA+QIAEACIEDM+DYSVL+KKNA 
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
           PHQ+QI+PKDILENIFYFRVCSYTEQIAL+NYLDKFITEHKDVKV+IVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKF+ AVVL NQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAYLEKSPSL+SASAPYSVTCRGIRN TSSNKRTKM+
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 344

[Close]

BLAST of CmoCh06G011690 vs. NCBI nr
Match: gi|1009142354|ref|XP_015888679.1| (PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 536.2 bits (1380), Expect = 4.3e-149
Identity = 265/346 (76.59%), Postives = 309/346 (89.31%), Query Frame = 1


Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISNNEAFEVLKFASHGSRLD 60
           MEVGRLPISA+ RGKLISAGYT+LSSL+S+SPSDLA++L I  +EA E+LK AS  SRLD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTSLSSLSSLSPSDLAKDLNIPESEALEILKVASLTSRLD 60

Query: 61  RPDGSGAIVNGAETAWDMLHKEQLLPRITTSCADLDNLLGGGINSSEVTEIGGVPGIGKT 120
           + DG+ A VNGA+TAWDMLH+EQL PRITTSCAD+D +LGGGIN  EVTEIGGVPGIGKT
Sbjct: 61  KQDGNHAFVNGAQTAWDMLHEEQLFPRITTSCADMDEILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGLGGKAVYIDTEGSFMVERAVQIAEACIEDMTDYSVLVKKNAT 180
           QLGIQLAVNVQIP  +GGLGGKA+YIDTEGSFMVERA QIAEAC+ DM++Y+ L++K   
Sbjct: 121 QLGIQLAVNVQIPVEYGGLGGKAIYIDTEGSFMVERAQQIAEACVVDMSEYNDLLRKGNR 180

Query: 181 PHQVQIQPKDILENIFYFRVCSYTEQIALVNYLDKFITEHKDVKVIIVDSVTFHFRQNFD 240
             QV+IQP DILENIFYFR+CSYTEQIAL+NYLD+FI+EHKDVK++IVDSVTFHFRQ+FD
Sbjct: 181 ACQVRIQPNDILENIFYFRICSYTEQIALINYLDRFISEHKDVKIVIVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFNSAVVLLNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLL  MALKLM LA+ ++ AVV+ NQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLGGMALKLMNLARNYSLAVVIFNQVTTKYTEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLRSASAPYSVTCRGIRNSTSSNKRTKMI 347
           ILYWNGDERYAY++KSPSLRSASAP+SVT +GIRNS S++KR +M+
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPFSVTSKGIRNSASNHKRIRMM 346

The following BLAST results are available for this feature:

BLAST of CmoCh06G011690 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RA51C_ARATH	6.0e-143	73.41	DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2	[more]
RA51C_CRIGR	1.6e-71	42.69	DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1	[more]
RA51C_MOUSE	1.1e-69	42.20	DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1	[more]
RA51C_HUMAN	4.5e-66	41.92	DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1	[more]
RA51C_DICDI	1.4e-51	42.80	DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV...	[more]

BLAST of CmoCh06G011690 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3U2_CUCSA	3.6e-179	92.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1	[more]
D7U7X0_VITVI	1.2e-147	77.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=...	[more]
W9RJ62_9ROSA	5.2e-146	75.72	DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 S...	[more]
A0A061E1X4_THECC	1.6e-142	74.43	RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 S...	[more]
M5X6P1_PRUPE	2.1e-142	73.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007713mg PE=4 SV=1	[more]

BLAST of CmoCh06G011690 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45280.2	6.6e-140	68.65	RAS associated with diabetes protein 51C	[more]
AT3G22880.1	4.7e-29	35.38	DNA repair (Rad51) family protein	[more]
AT5G20850.1	8.6e-23	29.27	RAS associated with diabetes protein 51	[more]
AT5G57450.1	1.5e-19	32.08	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT2G28560.1	1.2e-16	23.01	DNA repair (Rad51) family protein	[more]

BLAST of CmoCh06G011690 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432271\|ref\|XP_004133923.1\|	5.2e-179	92.77	PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus]	[more]
gi\|659075500\|ref\|XP_008438178.1\|	8.8e-179	92.77	PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo]	[more]
gi\|659075498\|ref\|XP_008438177.1\|	1.1e-176	90.93	PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo]	[more]
gi\|778677460\|ref\|XP_011650791.1\|	3.1e-176	92.20	PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus]	[more]
gi\|1009142354\|ref\|XP_015888679.1\|	4.3e-149	76.59	PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010995	DNA_repair_Rad51/TF_NusA_a-hlx
IPR013632	DNA_recomb/repair_Rad51_C
IPR016467	DNA_recomb/repair_RecA-like
IPR020588	RecA_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0003677	DNA binding
GO:0005524	ATP binding
GO:0008094	DNA-dependent ATPase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045003	double-strand break repair via synthesis-dependent strand annealing
biological_process	GO:0006281	DNA repair
biological_process	GO:0007143	female meiotic division
biological_process	GO:0007141	male meiosis I
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0016444	somatic cell DNA recombination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G011690.1	CmoCh06G011690.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	unknown	SSF47794	Rad51 N-terminal domain-like	coord: 6..54 score: 7.2
IPR013632	DNA recombination and repair protein Rad51, C-terminal	PFAM	PF08423	Rad51	coord: 71..335 score: 8.9
IPR016467	DNA recombination and repair protein, RecA-like	PIR	PIRSF005856	Rad51	coord: 1..339 score: 5.4
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROFILE	PS50162	RECA_2	coord: 84..273 score: 56
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 86..335 score: 2.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 86..334 score: 5.49
None	No IPR available	GENE3D	G3DSA:1.10.150.20		coord: 8..51 score: 3.
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 1..342 score: 3.2E
None	No IPR available	PANTHER	PTHR22942:SF14	DNA REPAIR PROTEIN RAD51 HOMOLOG 3	coord: 1..342 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G011690	Cucsa.257540	Cucumber (Gy14) v1	cgycmoB0718
CmoCh06G011690	CmaCh06G011430	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G011690	Cla021319	Watermelon (97103) v1	cmowmB793
CmoCh06G011690	Csa3G126250	Cucumber (Chinese Long) v2	cmocuB806
CmoCh06G011690	MELO3C006201	Melon (DHL92) v3.5.1	cmomeB755
CmoCh06G011690	ClCG05G002360	Watermelon (Charleston Gray)	cmowcgB743
CmoCh06G011690	CSPI03G09670	Wild cucumber (PI 183967)	cmocpiB814
CmoCh06G011690	Lsi05G019490	Bottle gourd (USVL1VR-Ls)	cmolsiB757
CmoCh06G011690	Cp4.1LG08g02080	Cucurbita pepo (Zucchini)	cmocpeB796
CmoCh06G011690	MELO3C006201.2	Melon (DHL92) v3.6.1	cmomedB857
CmoCh06G011690	CsaV3_3G009800	Cucumber (Chinese Long) v3	cmocucB0953
CmoCh06G011690	Cla97C05G082870	Watermelon (97103) v2	cmowmbB833
CmoCh06G011690	Bhi01G000176	Wax gourd	cmowgoB1014
CmoCh06G011690	CsGy3G009760	Cucumber (Gy14) v2	cgybcmoB401
CmoCh06G011690	Carg06375	Silver-seed gourd	carcmoB1288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G011690	Watermelon (97103) v2	cmowmbB836
CmoCh06G011690	Wax gourd	cmowgoB1001
CmoCh06G011690	Cucurbita moschata (Rifu)	cmocmoB224
CmoCh06G011690	Cucurbita moschata (Rifu)	cmocmoB308
CmoCh06G011690	Cucumber (Gy14) v1	cgycmoB1007
CmoCh06G011690	Cucurbita maxima (Rimu)	cmacmoB271
CmoCh06G011690	Cucurbita maxima (Rimu)	cmacmoB362
CmoCh06G011690	Wild cucumber (PI 183967)	cmocpiB839
CmoCh06G011690	Cucumber (Chinese Long) v2	cmocuB829
CmoCh06G011690	Melon (DHL92) v3.5.1	cmomeB740
CmoCh06G011690	Watermelon (Charleston Gray)	cmowcgB745
CmoCh06G011690	Watermelon (97103) v1	cmowmB801
CmoCh06G011690	Cucurbita pepo (Zucchini)	cmocpeB765
CmoCh06G011690	Cucurbita pepo (Zucchini)	cmocpeB778
CmoCh06G011690	Cucurbita pepo (Zucchini)	cmocpeB787
CmoCh06G011690	Bottle gourd (USVL1VR-Ls)	cmolsiB735
CmoCh06G011690	Cucumber (Gy14) v2	cgybcmoB834
CmoCh06G011690	Melon (DHL92) v3.6.1	cmomedB842
CmoCh06G011690	Silver-seed gourd	carcmoB0322
CmoCh06G011690	Silver-seed gourd	carcmoB0852
CmoCh06G011690	Cucumber (Chinese Long) v3	cmocucB0980