ClCG05G002360 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G002360
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRad51 DNA recombination/repair protein
LocationCG_Chr05 : 2257646 .. 2262635 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGGTATTATTTCTCTCCATCTCTCATCAACGAACTTCCTCTTCAACTTCTCGTTTCGCTTTTAATTCTATGGTTTTCTGTTTGTTCTCGATCTTTGTACTTGTGTCGTTTCTATACATTTGTATGTGTCTTTTCCGCTTTTATGATATAATTCGACGCACGAGTTTTTTTATCAAGGAGTTTGAAATTAGAAAAGACTCGGATGAACTTTCATTGCAGGAAAGTTTAACCTCTTAAGAGATTTTTTTAGGAGAAGAAACATTCGGCAATCCTGAACAGAACTTGAAATAGAAAACGACCATACGAGTCTCAAATTGTGGTAACAATTGACTACTTGTAATGATCAGACAGTAATCTATTGTAATTAAATCATTTGACTGTCTTAATGATGTTAATTGCAACGATTGTTAAATGATTATCGAACTCCTGTGAATTGGGTTACAGTTGTGTTGAGTTTCGGACGAAAATTAGTTTTATATCCCTGTATGTTCCTGTTGGAAGTAATCAAATAGTTTTGATGACCAAAACTATATACAGCATTGGTTCATTCTTCTTTTTACTATATCTTTTAAGGTTAGGTATTTGAAAGGAATTTATTTCTCAACATCCCTCGTTAAAACAAACAAATATTGTAGCATTTCTTTGATCTTAAATTTTGATTGGACGGAAGCATGGCTTTTTCTTCATTATTAGTAACCCAAAAATTCACGCACTTCTGCTTATTTGCAGTAACAATTTTTCTTCAGAATGAGCTTGTCTCGGGCTTTTTCCTGTTATCATGCTGCGGTTTATATTACGTGTATTTCTCTTAATTTTATCTATTTACTTATTTCTTTCCTGCTCAATTTCATCGATCTTGTTATTTTGGTTTATACATTAAATCCTTGTCTTTGGATGTTGAGGGTTTCTAACAAGCCTTCTCATGTGATTCAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTACATTTTCCTCTTTCATAGTTTATTTTTGAAAGGGAAAGAAAGAAGAAAACTGTGAACTGTGTGACTTATGGAATCATGCGTATGGTGCATATGGTTTGTTTAAATGTCATCACTTTGTTGGTTCTGAAATTTCTTCTTCAAAGATGAGTACTTCTTAATTTACTCCGAATAAACGTAGATGACTCAAGAAATAGACAAAACTGGTTCTTATCTTTCTTTCCTTTTTTAGTTTTTAATTTTTTAATGACAATTTCTTGTAGGTATGTTCCATTTAAATGAAGCTTCCACTGTGTTTTATATCAATAATAAATTTTTTATTGTTAACTTATCCTGTAGTGGTTTATTTCCATAAATTGGTAATGATATATTTGTGCACATCTGGTTTCTTCTAAGCAATCTTTTTTCATATTGAACCAATGTTATGAATTTCTATCCATCACCTCAATGTGTATGGAAAATACTTTATCAAAAGTGTAAATATCTTATGATATACCTTGATGGGCTCATTTACTATGAGTTAGCTGTTTTAAATATTGATGTTGATGTGCTCATTGATGTATATCTTTTTTGTTTGTCTGTTTAAATTACTTTCATATTTTATTATTTTCTAATCATTATTAATATATCGTCAAGTTAGTTTTGATCAATAGATGTAATTTCAAATATCTGATTTGATTTCTTATCTTGTACAGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTTAGTGAGCATCATCCTTTCTTCTGGCCAGCTGCATTATTATGTATATTGCTACATTGTTTTCTCCCCTTTACTTTTAAAGAATATTGCACAATATTTATATATAGTCAACTTATGTTCTATTACTATGCTTCTAGCAATATGAGCATTTAAGATAATCTCTTTATTTATACCAGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGTATGAATTTTTGTTATATGTTTCTTTCCCAGTATGAAAATGGTTCTTTGTTGTTTAGAAATAAAATGTCACGATCTTTGTTTGTATTGAGTAACAGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGGTAGGTTCCCTTTCAGATTTTGCTCCTGGTTCTTTTCGACAATTTTGCTAGTGATCTATAAATGCAACCTAATTAGGGATATGGCTTTCCTTGATTTGTAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTATGTAGATTTTTCTTTTAACTCTTAATTCAGTGTCTAGGCAAATAATTCGGATGTGTAGTTCCCTCGTATTTCAAGTTTATCTTGTATTACATTACTTAATGATGCCATGTTATTTGGAAGCTTTCTTCTTTTGTCTGGAGTACGTTGTTGCTTTTCTTGATTTGGATACTTATAACCAAGTTTTTTCTGAATTAAATGTTTTTTTTTCTTCATCTTGTTTGTCGGCCTTGAGTTCTGAGTGTTCTGAAAATTACCGATCATTTCTTTGCAGGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTAAGAATCAATCATTTCTCATTATAATGTTTCAAACTTATTCATTTGTATGATGGGGTATCAACTTAAATTGATATGAGCAAGAGCTGCTAGCCTGCTTTATAGTTAATTGTAAAAAACGTCATCTTCCTTGCATCTTCCTTGCAGTTGATGAGTTCCACTGACCTCTATTTGGTTGATATGCAAAGAAAATTCACTGCACTTGAATGTGTCTAAACTTTAAGCTAGAATATTGAGTAAGTTTTATAAATAAAATCTGGCTCATGGAAATAACAAAAACCACCGTATTTGATTAATAAACTTAGAATTTATGAACCTCACATTACATTTGAAACATTTAGAAATATTAGCTTTTGAACTCCCGATTCAGTTTTTTAACATAAGGTTCAGCATGATATATGTAAATCATTTAAATGGATGAGAAATTCATTTATTTGAAGAAAATATATTTAAGCAGATAATTTTCTTCCTATGCTCCTTCCATATCATGTCAATATTCTGAATGTGCATCTTTTACTTTTCAACCAACTAAGAGATGCATATATGCTTGGTTGTCACTACCGGTTTTATTTTACATGACTTTCACTGTCCTTTGTTATATGTCAACTGCCTTATGTTCTTACATTCCATTTAGGATCAGGAATAGGTGTAATTAGACCTGTTTTTTTACATATCTCTAGTTATTTAGGGGCCAGGACAAAGGGTCGTGATCCTGCAAAGGTGAACTAATACAAAAACACGTCCTCAATTCATACTAGAAGTCCACTTCAGTCATTTGAGTCTTTGACAACCACTCTCTCCTGGGAAACTCCTTGTTCTATGATTGATTTGACCATTTTCTTTAGCGGAAGCTGAAAACAGTTATCATTTTCCTTCTAATTTATTTTATACTTTCTTGTTTCATTCTTGCTGAAAACAGTTATCATTTTCCTTCTAATTTATTTTATACTTTCTTGTTTCATTCATGCTCGTAGTAACTTTAATTGTTGGGTTTTACTTTTATTCCAATGTTTTCCCCCTGCCTTAGTTGTTTTCTTTTCCCTCTATTCTCCAACCCTGTGGCAGGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTATGTCCTTTTAAGTCACCCCTTACCTTACACTGTTGAAAATCATTGTTGATGTGTTACTTGTTGCACTCCCTTGGATGTCTTTAAGCATTATGATTCCATTGAACTGATTAGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAAGATTTGAAACGCCTTTAAAGCTCGCATGAATTCCTCTTGTTCTCACGCTTCATCTTATTTAAGCATGCATAGTTGAATTACTTGGATATGGGAAATTGAAAATTGCCCTTTTTTGTTAAATAGCTGCTCACATTTATTTTCTTGCCGTCAGCTGGAATCTTTTTCATGGTTCCCCCCTCTATATAGTTTATAAAGTAATCATTTAGTTATATTAATACCTCTTCTTTTTAGAAAAATGAAAGTTTGGTTATTGATAATGTTGTTTTTAGCCCAAATAATTCTCGTGATTTGAAATACTCTGTTGGTCATTTTGATACTAAGTTTAGGTGAGTTAGGCTTTGTTTCATAACTATTTGATAACCATCTAGGTTTTGGTTGATTTGAAAATAAAGTATATAAATACTACTTCGACAGATGTTTTTCTTTGTTTTGTTAG

mRNA sequence

TTTCACTTTCTTCCTGGCGATAGTCGATAGTGTCACTTCGAGATCCAGAGAGGAACCAAAAATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAAGATTTGAAACGCCTTTAAAGCTCGCATGAATTCCTCTTGTTCTCACGCTTCATCTTATTTAAGCATGCATAGTTGAATTACTTGGATATGGGAAATTGAAAATTGCCCTTTTTTGTTAAATAGCTGCTCACATTTATTTTCTTGCCGTCAGCTGGAATCTTTTTCATGGTTCCCCCCTCTATATAGTTTATAAAGTAATCATTTAGTTATATTAATACCTCTTCTTTTTAGAAAAATGAAAGTTTGGTTATTGATAATGTTGTTTTTAGCCCAAATAATTCTCGTGATTTGAAATACTCTGTTGGTCATTTTGATACTAAGTTTAGGTGAGTTAGGCTTTGTTTCATAACTATTTGATAACCATCTAGGTTTTGGTTGATTTGAAAATAAAGTATATAAATACTACTTCGACAGATGTTTTTCTTTGTTTTGTTAG

Coding sequence (CDS)

ATGGAGGTCGGGAGGTTACCCATCTCCGCCACGCTGCGAGGTAAACTGATTTCAGCCGGCTATACTACTCTCTCCTCTCTCGCATCCGTCTCTCCTTCCGACCTTGCTCGAGAACTGGAAATCTCGGACAATGAAGCTTTTGAAGTTCTCAAGTTTGGATCACATGGTAGTGGGCTGGACAGGTCAGTCAGGAGCAGTGCTATTGTTGATGGTGCAGAGACTGCTTGGGATTTGCTCCACAAAGAGAAGTTCATTTCTCGTATTACCACATCTTGTGCAGATTTAGATAACCTTCTTGGTGGAGGAGTTAATAGCAGTGAAGTTACGGAAATTGGTGGAGTACCGGGCATAGGTAAAACACAGCTTGGGATTCAGCTTGCTGTAAATGTTCAAATTCCAGGTGCATTTGGGGGTGTAGGTGGAAAAGCAGTTTATATAGATACAGAAGGGAGCTTTATGGTGGAGCGTGCCTTGCAGATTGCTGAAGCATGTATAGAAGATATGTCAGATTACAGTGTCTTACTAAAGAAGAATGCCATACCTCATCAAATTCAAATCGAATCAAAAGATATCTTGGAAAACATATATTATTTTCGTGTGTGCAGCTATACAGAGCAAATTGCTTTAATAAATTATCTGGACAAGTTCATTACTGAGCACAAAGATGTTAAGGTTGTCATAGTTGATAGTGTGACATTCCATTTCCGCCAAAATTTTGATGACTTGGCCCTCCGGACACGGTTGCTCAGTGAAATGGCTCTTAAGTTGATGAAGCTGGCCAAGAAGTTTAGTTTGGCTGTTGTTCTATTTAATCAGGTGACCACTAAGTTCGCCGAAGGTTCATTCCAATTAACTCTTGCATTGGGTGATAGCTGGTCACACTCTTGCACGAATCGGATCATTTTATATTGGAACGGCGATGAAAGGTACGCATATCTTGAAAAGTCACCCTCTCTTCAATCTGCCTCGGCACCTTATTCTGTGACTTGTAAAGGCATTAGAAATTCTACATCAAGTAACAAGAGAACCAAAATGATGTAA

Protein sequence

MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM
Homology
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BLAST of ClCG05G002360 vs. Swiss-Prot
Match: RA51C_ARATH (DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2)

HSP 1 Score: 500.4 bits (1287), Expect = 1.6e-140
Identity = 245/346 (70.81%), Postives = 299/346 (86.42%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR+  I++ EAFE+LK  +      
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSC--- 81

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
               S ++++GA+ AWD+LH+E+ + RITTSC+DLDN+LGGG++  +VTEIGGVPGIGKT
Sbjct: 82  -CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 141

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           Q+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVERALQIAEAC+EDM +Y+  + K+  
Sbjct: 142 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 201

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
            +Q+Q++ +DILENI+YFRVCSYTEQIAL+N+L+KFI+E+KDVKVVIVDS+TFHFRQ++D
Sbjct: 202 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD 261

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLA RTR+LSEMALK MKLAKKFSLAVVL NQVTTKF+EGSFQL LALGDSWSHSCTNR+
Sbjct: 262 DLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRV 321

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL SASA Y+VT +G+RNS+SS+KR KMM
Sbjct: 322 ILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNSSSSSKRVKMM 363

[Close]
BLAST of ClCG05G002360 vs. Swiss-Prot
Match: RA51C_CRIGR (DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 7.2e-72
Identity = 151/349 (43.27%), Postives = 222/349 (63.61%), Query Frame = 1 

Query: 2   EVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDR 61
           E+   P+S T+R KL++AG+ T   +  V PS+L++E+ IS  EA E L+     S  D+
Sbjct: 4   ELVSFPLSPTVRVKLVAAGFQTAEDVLGVKPSELSKEVGISKEEALETLQIVRRESLTDK 63

Query: 62  SVRSSAIVDGAE-TAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 121
              + A V G + TA +LL +E     I T C+ LDN+LGGG+   + TE+ GVPG+GKT
Sbjct: 64  PRCAGASVAGKKYTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKT 123

Query: 122 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 181
           QL +QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +   +   K    
Sbjct: 124 QLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVTLANACIQHLHLIAGTHKDEE- 183

Query: 182 PHQIQIES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQ 241
            HQ  +E    ++IL +IYYFR   YTE +A +  L  F++ H  V++VI+D +   FR 
Sbjct: 184 -HQKALEGFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSNHSKVQLVIIDGIALPFRH 243

Query: 242 NFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCT 301
           + DDL+LRTRLL+ +A +++ LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T
Sbjct: 244 DLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAAT 303

Query: 302 NRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS--TSSNKRTK 345
            R+I +W   +R+A L KSPS + ++ P+ +T +G R++  T+S+ +T+
Sbjct: 304 IRLIFHWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAAVTASSSQTE 350

[Close]
BLAST of ClCG05G002360 vs. Swiss-Prot
Match: RA51C_MOUSE (DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.0e-69
Identity = 142/344 (41.28%), Postives = 220/344 (63.95%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRS-VRS 66
           P+S  +RGKL++AG+ T   +  V PS+L++E+ IS  EA E L+        ++     
Sbjct: 9   PLSPAVRGKLVAAGFQTAEDVLEVKPSELSKEVGISKEEALETLQILRRECLTNKPRCAG 68

Query: 67  SAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQ 126
           +++ +   TA +LL +E     I T C+ LDN+LGGG+   + TE+ GVPG+GKTQL +Q
Sbjct: 69  TSVANEKCTALELLEQEHTQGFIITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQ 128

Query: 127 LAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQ 186
           LAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +  + +        HQ  
Sbjct: 129 LAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVSLATACIQHL--HLIAGTHTEEEHQKA 188

Query: 187 IES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDL 246
           ++    ++IL +IYYFR   YTE +A +  L  F+++H  V++VI+D + F FR + +DL
Sbjct: 189 LKDFTLENILSHIYYFRCHDYTELLAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLEDL 248

Query: 247 ALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRIIL 306
           +LRTRLL+ +A +++ LA    LAV+L NQ+TTK  +    L  ALG+SW H+ T R+I 
Sbjct: 249 SLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDKNQALLVPALGESWGHAATIRLIF 308

Query: 307 YWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS--TSSNKRTK 345
           +W   +R+A L KSPS + ++ P+ +T +G R++  T+++ +T+
Sbjct: 309 HWEQKQRFATLYKSPSQKESTIPFQITPQGFRDAVVTAASSQTE 350

[Close]
BLAST of ClCG05G002360 vs. Swiss-Prot
Match: RA51C_HUMAN (DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 9.1e-67
Identity = 145/335 (43.28%), Postives = 205/335 (61.19%), Query Frame = 1 

Query: 7   PISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSS 66
           P+S  +R KL+SAG+ T   L  V PS+L++E+ IS  EA E L+       L    R +
Sbjct: 18  PLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQI-IRRECLTNKPRYA 77

Query: 67  AIVDGAE--TAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGI 126
              +  +  TA +LL +E     I T C+ LD++LGGGV   + TEI G PG+GKTQL +
Sbjct: 78  GTSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCM 137

Query: 127 QLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQI 186
           QLAV+VQIP  FGGV G+AV+IDTEGSFMV+R + +A ACI+ +    +  K     H+ 
Sbjct: 138 QLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQ--LIAEKHKGEEHRK 197

Query: 187 QIES---KDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDD 246
            +E     +IL +IYYFR   YTE +A +  L  F++EH  V++VIVD + F FR + DD
Sbjct: 198 ALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDD 257

Query: 247 LALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRII 306
           L+LRTRLL+ +A +++ LA    LAV+L NQ+TTK       L  ALG+SW H+ T R+I
Sbjct: 258 LSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 317

Query: 307 LYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 337
            +W+  +R A L KSPS +  +  + +  +G R++
Sbjct: 318 FHWDRKQRLATLYKSPSQKECTVLFQIKPQGFRDT 349

[Close]
BLAST of ClCG05G002360 vs. Swiss-Prot
Match: RA51C_DICDI (DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 8.8e-54
Identity = 109/253 (43.08%), Postives = 161/253 (63.64%), Query Frame = 1 

Query: 86  SRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVY 145
           + I T C+++D +L GG    ++TEI GVPGIGKT +  QL VN  IP   GGV GKA+Y
Sbjct: 62  NNIITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIY 121

Query: 146 IDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKD-ILENIYYFRVCSYT 205
           IDTEGS+  +R  ++A   +  +     +L KN +     I + + +L +IYY+RV  Y 
Sbjct: 122 IDTEGSYSCQRVREMATHLVNHLE---CVLLKNPMTQTTYIPTVETVLNSIYYYRVYHYI 181

Query: 206 EQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFS 265
           E I+LI+ L  F+ ++KDVK+++VDS+T+ FR +F D+ LRTR L  +A  LM +A +++
Sbjct: 182 EIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGLRTRSLLSLAQNLMNIATRYN 241

Query: 266 LAVVLFNQVTTKFAEGSFQLTLA--LGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSA 325
           LAVV+ NQVTTK +    +  L   LG+SW+H CT R++L+W   +R+ +L KSPS +S 
Sbjct: 242 LAVVVMNQVTTKISPNQKESILVPYLGESWTHICTYRMVLFWKQKQRFCHLYKSPSFKSC 301

Query: 326 SAPYSVTCKGIRN 336
             P+ +   GIR+
Sbjct: 302 FTPFDIVEYGIRD 311

[Close]
BLAST of ClCG05G002360 vs. TrEMBL
Match: A0A0A0L3U2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1)

HSP 1 Score: 641.3 bits (1653), Expect = 6.6e-181
Identity = 326/346 (94.22%), Postives = 335/346 (96.82%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360 vs. TrEMBL
Match: D7U7X0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 1.3e-144
Identity = 262/346 (75.72%), Postives = 304/346 (87.86%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME+ RLPISA+ RGKLISAGYT+LSSL+S+SPS LA++L+ISDNEA E+L+  S GS LD
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           +   S AIV+GA+TAWD+LH+E+ +  ITTSC DLD++LGGG+   EVTEIGGVPGIGKT
Sbjct: 61  KPDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP  +GG+GGKA+YIDTEGSFM+ER+LQIAEACIEDMS  S  L+K+  
Sbjct: 121 QLGIQLAVNVQIPVNYGGLGGKAIYIDTEGSFMLERSLQIAEACIEDMSGNSDFLQKDFQ 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q++ + KD L+NI+YFRVCSYTEQIA+INYLDKFI+EHKDV VVI+DSVTFHFRQ+FD
Sbjct: 181 SCQVKAQPKDFLQNIFYFRVCSYTEQIAMINYLDKFISEHKDVNVVIIDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLMKLAKKFSLAVVL NQVTTK  EGSFQLTLALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLTLALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL+SASAPYSVT KGIR +TS  KR K+M
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPYSVTGKGIRTATSKCKRIKIM 346

[Close]
BLAST of ClCG05G002360 vs. TrEMBL
Match: A0A061E1X4_THECC (RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 5.4e-143
Identity = 257/348 (73.85%), Postives = 306/348 (87.93%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHG--SG 60
           ME+ RLPISA+ RGKLISAGYTTLSSL+S+S SDLARE ++S++EA ++LKF SH    G
Sbjct: 1   MEIWRLPISASQRGKLISAGYTTLSSLSSISSSDLARESKVSESEALDILKFASHSHSGG 60

Query: 61  LDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIG 120
            + S  + +I +GA+ AWD+LH+E+ +  ITTS ADLDN+LGGG++  EVTEIGGVPGIG
Sbjct: 61  WEMSSGNCSIFEGAQNAWDMLHEEESLVHITTSSADLDNILGGGIHCKEVTEIGGVPGIG 120

Query: 121 KTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKN 180
           KTQLGIQ+AVNVQIP  FGG+GGKA+YIDTEGSFMVERALQIAEACIEDMS+Y+  ++K+
Sbjct: 121 KTQLGIQIAVNVQIPHGFGGLGGKAIYIDTEGSFMVERALQIAEACIEDMSEYNRFIRKD 180

Query: 181 AIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQN 240
               +I+++ KDIL NI+YFR+CSYTEQIALINYLDKFI+EHKDVKVV+VDSVTFHFRQ+
Sbjct: 181 FQACEIRMQPKDILGNIFYFRICSYTEQIALINYLDKFISEHKDVKVVVVDSVTFHFRQD 240

Query: 241 FDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTN 300
           FDD+ALRTR+LS MALKLMKLAKKFSLAVVL NQVTTK  EGSFQL LALGDSWSH+CTN
Sbjct: 241 FDDMALRTRVLSGMALKLMKLAKKFSLAVVLLNQVTTKHTEGSFQLALALGDSWSHTCTN 300

Query: 301 RIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           RI+LYWNG+ERYAY++KSPSL+SASA YSVT +GIRNS+SS KR KMM
Sbjct: 301 RIVLYWNGNERYAYIDKSPSLRSASAAYSVTRRGIRNSSSSCKRIKMM 348

[Close]
BLAST of ClCG05G002360 vs. TrEMBL
Match: W9RJ62_9ROSA (DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 7.1e-143
Identity = 255/346 (73.70%), Postives = 304/346 (87.86%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISA+ RGKLI AGYTTLSSL+S+SPSDLAREL ++++EA E+LK  S  S LD
Sbjct: 1   MEVGRLPISASQRGKLIRAGYTTLSSLSSLSPSDLARELNVTNSEALEILKVASLNSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           R+    AI +GA+TAWD+LH+E+ + RITTSCADLDN+LGGG+N  EVTEIGGVPGIGKT
Sbjct: 61  RTDGGHAIFNGAQTAWDMLHEEQLLRRITTSCADLDNILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP   GG+GGKAVYIDTEGSFMVERALQIAEA + DM +Y+ LL+K   
Sbjct: 121 QLGIQLAVNVQIPVDLGGLGGKAVYIDTEGSFMVERALQIAEASVLDMVEYNDLLRKEHR 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q+ ++  D+LE+IYYFR+CSYTEQ+A+I+YLDKFI+ HKDVK+VIVDSVTFHFRQ+F+
Sbjct: 181 KCQVNLKPNDLLESIYYFRICSYTEQMAVISYLDKFISAHKDVKIVIVDSVTFHFRQDFE 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLS MALKLM LAK ++LAVV+FNQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLSGMALKLMNLAKTYNLAVVIFNQVTTKYMEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGD+RYA+++KSPSL+SASAP+SVT KGIRNS S++KR K+M
Sbjct: 301 ILYWNGDDRYAFIDKSPSLRSASAPFSVTGKGIRNSASNHKRIKLM 346

[Close]
BLAST of ClCG05G002360 vs. TrEMBL
Match: A0A0D2PCX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G162800 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.0e-142
Identity = 252/346 (72.83%), Postives = 303/346 (87.57%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           ME+ RLPISA+ RGKLIS+GYT+LSSL+S+S SDLAREL++S++EA  +LK  SH  G +
Sbjct: 1   MEIWRLPISASQRGKLISSGYTSLSSLSSISSSDLARELKVSESEAMNILKVASHSRGSE 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
            S  S +IV+GA++AWD+LH E+ +  ITTS ADLDN+LGGG++  EVTEIGGVPGIGKT
Sbjct: 61  TSNASCSIVEGAQSAWDMLHDEESLMHITTSSADLDNILGGGIHCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQ+AVNVQIP  FGG+GGKA+YIDTEGSFMVERA QIAEACIEDMS+Y+  L+K+  
Sbjct: 121 QLGIQIAVNVQIPNDFGGLGGKAIYIDTEGSFMVERAFQIAEACIEDMSEYNRFLRKDFQ 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             +I++  +DILENI+YFR+CSYTEQIALINYLDKF++EHKDVKV++VDSVTFHFRQ+FD
Sbjct: 181 ECKIKMLPQDILENIFYFRICSYTEQIALINYLDKFLSEHKDVKVIVVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           D+ALRTR+LS MALKLM LAK+FSLAVVL NQVTTK  E SFQL LALGDSWSH+CTNRI
Sbjct: 241 DMALRTRVLSGMALKLMNLAKRFSLAVVLLNQVTTKHTEASFQLALALGDSWSHTCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           +LYWNG+ERYAY++KSPSL+SASA YSVT +GIRNS+SS KR KMM
Sbjct: 301 VLYWNGNERYAYIDKSPSLRSASAAYSVTARGIRNSSSSCKRIKMM 346

[Close]
BLAST of ClCG05G002360 vs. TAIR10
Match: AT2G45280.2 (AT2G45280.2 RAS associated with diabetes protein 51C)

HSP 1 Score: 486.1 bits (1250), Expect = 1.8e-137
Identity = 245/370 (66.22%), Postives = 298/370 (80.54%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLAR----------------------- 60
           ME  RLP+S ++RGKLISAGYT LSS+ASVS SDLAR                       
Sbjct: 22  MEAWRLPLSPSIRGKLISAGYTCLSSIASVSSSDLARGKFLLYPNLRRLESVARFSLIST 81

Query: 61  -ELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLD 120
               I++ EAFE+LK  +          S ++++GA+ AWD+LH+E+ + RITTSC+DLD
Sbjct: 82  DNANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLD 141

Query: 121 NLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVER 180
           N+LGGG++  +VTEIGGVPGIGKTQ+GIQL+VNVQIP   GG+GGKA+YIDTEGSFMVER
Sbjct: 142 NILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVER 201

Query: 181 ALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIYYFRVCSYTEQIALINYLDKF 240
           ALQIAEAC+EDM +Y+  + K+   +Q+Q++ +DILENI+YFRVCSYTEQIAL+N+L+KF
Sbjct: 202 ALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKF 261

Query: 241 ITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTK 300
           I+E+KDVKVVIVDS+TFHFRQ++DDLA RTR+LSEMALK MKLAKKFSLAVVL NQVTTK
Sbjct: 262 ISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTK 321

Query: 301 FAEGSFQLTLALGDSWSHSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 347
           F+EGSFQL LALGDSWSHSCTNR+ILYWNGDERYAY++KSPSL SASA Y+VT +G+RNS
Sbjct: 322 FSEGSFQLALALGDSWSHSCTNRVILYWNGDERYAYIDKSPSLPSASASYTVTSRGLRNS 381

[Close]
BLAST of ClCG05G002360 vs. TAIR10
Match: AT3G22880.1 (AT3G22880.1 DNA repair (Rad51) family protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-29
Identity = 92/273 (33.70%), Postives = 138/273 (50.55%), Query Frame = 1 

Query: 71  GAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNV 130
           G  T  D L K K + +ITT C  LD+LLGGG+ +S +TE  G    GKTQL   L V  
Sbjct: 91  GYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAITEAFGEFRSGKTQLAHTLCVTT 150

Query: 131 QIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKD 190
           Q+P    G  GK  YIDTEG+F  +R + IAE                    +  ++   
Sbjct: 151 QLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPGA 210

Query: 191 ILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNF---DDLALRTR 250
           +L+NI Y R  +Y  Q  L+  L   ++E +  +++IVDS+   FR +F    +LA R +
Sbjct: 211 VLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRILIVDSIIALFRVDFTGRGELADRQQ 270

Query: 251 LLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSF---QLTLALGDSWSHSCTNRIIL-Y 310
            L++M  +L+K+A++F++AV + NQV      G F       A G   +H+ T R++   
Sbjct: 271 KLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFRK 330

Query: 311 WNGDERYAYLEKSPSLQSASAPYSVTCKGIRNS 337
             GD R   +  +P+L  A A + +T  GI ++
Sbjct: 331 GKGDTRVCKVYDAPNLAEAEASFQITQGGIADA 342

[Close]
BLAST of ClCG05G002360 vs. TAIR10
Match: AT5G20850.1 (AT5G20850.1 RAS associated with diabetes protein 51)

HSP 1 Score: 114.0 bits (284), Expect = 1.8e-25
Identity = 97/328 (29.57%), Postives = 153/328 (46.65%), Query Frame = 1 

Query: 15  KLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAET 74
           KL  AG  T+  +A     DL +   ISD +  ++++             S  +  G  +
Sbjct: 43  KLRDAGLCTVEGVAYTPRKDLLQIKGISDAKVDKIVE-----------AASKLVPLGFTS 102

Query: 75  AWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPG 134
           A  L  + + I +IT+   +LD +L GG+ +  +TE+ G    GKTQL   L V  Q+P 
Sbjct: 103 ASQLHAQRQEIIQITSGSRELDKVLEGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPM 162

Query: 135 AFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILEN 194
             GG  GKA+YID EG+F  +R LQIA+                    +  +   D+LEN
Sbjct: 163 DQGGGEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLEN 222

Query: 195 IYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD---DLALRTRLLSE 254
           + Y R  +   Q  L+      + E +   ++IVDS T  +R +F    +L+ R   L++
Sbjct: 223 VAYARAYNTDHQSRLLLEAASMMIETR-FALLIVDSATALYRTDFSGRGELSARQMHLAK 282

Query: 255 MALKLMKLAKKFSLAVVLFNQVTTKFAEGSF-----QLTLALGDSWSHSCTNRIIL-YWN 314
               L KLA +F +AVV+ NQV  +  +GS      Q     G+  +H+ T R+ L    
Sbjct: 283 FLRSLQKLADEFGVAVVITNQVVAQ-VDGSALFAGPQFKPIGGNIMAHATTTRLALRKGR 337

Query: 315 GDERYAYLEKSPSLQSASAPYSVTCKGI 334
            +ER   +  SP L  A A + ++ +G+
Sbjct: 343 AEERICKVISSPCLPEAEARFQISTEGV 337

[Close]
BLAST of ClCG05G002360 vs. TAIR10
Match: AT5G57450.1 (AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3))

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-20
Identity = 65/205 (31.71%), Postives = 104/205 (50.73%), Query Frame = 1 

Query: 77  DLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGAF 136
           +LL +     ++TT C  LD  L GG++   +TEI    G GKTQL +QL++  Q+P + 
Sbjct: 10  NLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISH 69

Query: 137 GGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENIY 196
           GG+ G ++Y+ +E  F   R  Q++       S+ S+    N  P           ++++
Sbjct: 70  GGLNGSSLYLHSEFPFPFRRLHQLSHTF--HQSNPSIYANYNDNP----------CDHVF 129

Query: 197 YFRVCSYTEQIALINYLDKFITEHK---DVKVVIVDSVTFHFRQNFD----DLALRTRLL 256
              V S      ++  +D F+   K    +K++++DSV   FR  FD    DL  R+ L 
Sbjct: 130 VQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLF 189

Query: 257 SEMALKLMKLAKKFSLAVVLFNQVT 275
            +++ KL +LA KF LA+V+ NQVT
Sbjct: 190 FKISGKLKQLASKFDLAIVITNQVT 202

[Close]
BLAST of ClCG05G002360 vs. TAIR10
Match: AT2G28560.1 (AT2G28560.1 DNA repair (Rad51) family protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-18
Identity = 85/339 (25.07%), Postives = 147/339 (43.36%), Query Frame = 1 

Query: 21  YTTLSSLASVSPSDLARE-LEISDNEAFEVLKFGSHGSGLDRSVRSSAIVDGAETAWDLL 80
           +T +S++ +      A++ L +++ E  E+L  G        S  S A     ++A  LL
Sbjct: 12  HTKISNIFAARNIITAKDALSMTEFELMELLDVGMKEIRSAISFISEATSPPCQSARSLL 71

Query: 81  HK----EKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKTQLGIQLAVNVQIPGA 140
            K    E     + T    LD+ L GG+    +TE+ G PGIGK+Q  ++LA++   P A
Sbjct: 72  EKKVENEHLSGHLPTHLKGLDDTLCGGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVA 131

Query: 141 FGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAIPHQIQIESKDILENI 200
           +GG+ G+ +YID E  F   R +++      ++               ++  ++++   I
Sbjct: 132 YGGLDGRVIYIDVESKFSSRRVIEMGLESFPEV-------------FHLKGMAQEMAGRI 191

Query: 201 YYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFDDLALRTRLLSEMALK 260
              R  S       I  L   I +++ VK++++DS+T          A R   L      
Sbjct: 192 LVLRPTSLANFTESIQELKNSILQNQ-VKLLVIDSMTALLSGENKPGAQRQPQLGWHISF 251

Query: 261 LMKLAKKFSLAVVLFNQVTT----KFAEGSFQ-----------------LTLALGDSWSH 320
           L  LA+   + +V+ NQV +    + ++ SFQ                 L  ALG +W+H
Sbjct: 252 LKSLAEFSRIPIVVTNQVRSQNRDETSQYSFQAKVKDEFKDNTKTYDSHLVAALGINWAH 311

Query: 321 SCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGI 334
           + T R++L     +R   + KSP     + P+ +T  GI
Sbjct: 312 AVTIRLVLEAKSGQRIIKVAKSPMSPPLAFPFHITSAGI 336

[Close]
BLAST of ClCG05G002360 vs. NCBI nr
Match: gi|659075500|ref|XP_008438178.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.2e-181
Identity = 327/346 (94.51%), Postives = 337/346 (97.40%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEIS+NEAFEVLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE K+ILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRNSTSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360 vs. NCBI nr
Match: gi|449432271|ref|XP_004133923.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 641.3 bits (1653), Expect = 9.4e-181
Identity = 326/346 (94.22%), Postives = 335/346 (96.82%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 346

[Close]
BLAST of ClCG05G002360 vs. NCBI nr
Match: gi|659075498|ref|XP_008438177.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 5.2e-179
Identity = 327/353 (92.63%), Postives = 337/353 (95.47%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPS+LARELEIS+NEAFEVLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSNLARELEISNNEAFEVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSEGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE K+ILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKNILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLA-------VVLFNQVTTKFAEGSFQLTLALGDSWS 300
           DLALRTRLLSEMALKLMKLAKKFSLA       VVLFNQVTTKFAEGSFQLTLALGDSWS
Sbjct: 241 DLALRTRLLSEMALKLMKLAKKFSLAVRINHLVVVLFNQVTTKFAEGSFQLTLALGDSWS 300

Query: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRNSTSSNKRTKMM
Sbjct: 301 HSCTNRIILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNSTSSNKRTKMM 353

[Close]
BLAST of ClCG05G002360 vs. NCBI nr
Match: gi|778677460|ref|XP_011650791.1| (PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 632.1 bits (1629), Expect = 5.7e-178
Identity = 324/346 (93.64%), Postives = 333/346 (96.24%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISATLRGKLIS+GYTTLSSLASVSPSDLARELEIS+NEAF+VLK  SHG GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           RS  S AIV+GAETAWD+LHKE+FI RITTSCADLDNLLGGG+N SEVTEIGGVPGIGKT
Sbjct: 61  RSDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIPGAFGGVGGKAVYI  EGSFMVERALQIAEACIEDMSDYSVLLKKNAI
Sbjct: 121 QLGIQLAVNVQIPGAFGGVGGKAVYI--EGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
           PHQIQIE KDILENI+YFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD
Sbjct: 181 PHQIQIEPKDILENIFYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLLSEMALK MKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI
Sbjct: 241 DLALRTRLLSEMALKFMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAYLEKSPSLQSASAPYSVTC+GIRN TSSNKRTKMM
Sbjct: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCRGIRNCTSSNKRTKMM 344

[Close]
BLAST of ClCG05G002360 vs. NCBI nr
Match: gi|1009142354|ref|XP_015888679.1| (PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 525.4 bits (1352), Expect = 7.5e-146
Identity = 258/346 (74.57%), Postives = 305/346 (88.15%), Query Frame = 1 

Query: 1   MEVGRLPISATLRGKLISAGYTTLSSLASVSPSDLARELEISDNEAFEVLKFGSHGSGLD 60
           MEVGRLPISA+ RGKLISAGYT+LSSL+S+SPSDLA++L I ++EA E+LK  S  S LD
Sbjct: 1   MEVGRLPISASQRGKLISAGYTSLSSLSSLSPSDLAKDLNIPESEALEILKVASLTSRLD 60

Query: 61  RSVRSSAIVDGAETAWDLLHKEKFISRITTSCADLDNLLGGGVNSSEVTEIGGVPGIGKT 120
           +   + A V+GA+TAWD+LH+E+   RITTSCAD+D +LGGG+N  EVTEIGGVPGIGKT
Sbjct: 61  KQDGNHAFVNGAQTAWDMLHEEQLFPRITTSCADMDEILGGGINCKEVTEIGGVPGIGKT 120

Query: 121 QLGIQLAVNVQIPGAFGGVGGKAVYIDTEGSFMVERALQIAEACIEDMSDYSVLLKKNAI 180
           QLGIQLAVNVQIP  +GG+GGKA+YIDTEGSFMVERA QIAEAC+ DMS+Y+ LL+K   
Sbjct: 121 QLGIQLAVNVQIPVEYGGLGGKAIYIDTEGSFMVERAQQIAEACVVDMSEYNDLLRKGNR 180

Query: 181 PHQIQIESKDILENIYYFRVCSYTEQIALINYLDKFITEHKDVKVVIVDSVTFHFRQNFD 240
             Q++I+  DILENI+YFR+CSYTEQIALINYLD+FI+EHKDVK+VIVDSVTFHFRQ+FD
Sbjct: 181 ACQVRIQPNDILENIFYFRICSYTEQIALINYLDRFISEHKDVKIVIVDSVTFHFRQDFD 240

Query: 241 DLALRTRLLSEMALKLMKLAKKFSLAVVLFNQVTTKFAEGSFQLTLALGDSWSHSCTNRI 300
           DLALRTRLL  MALKLM LA+ +SLAVV+FNQVTTK+ EGSFQL LALGDSWSHSCTNR+
Sbjct: 241 DLALRTRLLGGMALKLMNLARNYSLAVVIFNQVTTKYTEGSFQLALALGDSWSHSCTNRV 300

Query: 301 ILYWNGDERYAYLEKSPSLQSASAPYSVTCKGIRNSTSSNKRTKMM 347
           ILYWNGDERYAY++KSPSL+SASAP+SVT KGIRNS S++KR +MM
Sbjct: 301 ILYWNGDERYAYIDKSPSLRSASAPFSVTSKGIRNSASNHKRIRMM 346

The following BLAST results are available for this feature:
BLAST of ClCG05G002360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RA51C_ARATH1.6e-14070.81DNA repair protein RAD51 homolog 3 OS=Arabidopsis thaliana GN=RAD51C PE=1 SV=2[more]
RA51C_CRIGR7.2e-7243.27DNA repair protein RAD51 homolog 3 OS=Cricetulus griseus GN=RAD51C PE=2 SV=1[more]
RA51C_MOUSE2.0e-6941.28DNA repair protein RAD51 homolog 3 OS=Mus musculus GN=Rad51c PE=2 SV=1[more]
RA51C_HUMAN9.1e-6743.28DNA repair protein RAD51 homolog 3 OS=Homo sapiens GN=RAD51C PE=1 SV=1[more]
RA51C_DICDI8.8e-5443.08DNA repair protein RAD51 homolog 3 OS=Dictyostelium discoideum GN=rad51c PE=3 SV... [more]
BLAST of ClCG05G002360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3U2_CUCSA6.6e-18194.22Uncharacterized protein OS=Cucumis sativus GN=Csa_3G126250 PE=4 SV=1[more]
D7U7X0_VITVI1.3e-14475.72Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00380 PE=4 SV=... [more]
A0A061E1X4_THECC5.4e-14373.85RAS associated with diabetes protein 51C OS=Theobroma cacao GN=TCM_005534 PE=4 S... [more]
W9RJ62_9ROSA7.1e-14373.70DNA repair protein RAD51-3-like protein OS=Morus notabilis GN=L484_025583 PE=4 S... [more]
A0A0D2PCX2_GOSRA6.0e-14272.83Uncharacterized protein OS=Gossypium raimondii GN=B456_004G162800 PE=4 SV=1[more]
BLAST of ClCG05G002360 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45280.21.8e-13766.22 RAS associated with diabetes protein 51C[more]
AT3G22880.14.7e-2933.70 DNA repair (Rad51) family protein[more]
AT5G20850.11.8e-2529.57 RAS associated with diabetes protein 51[more]
AT5G57450.18.9e-2031.71 homolog of X-ray repair cross complementing 3 (XRCC3)[more]
AT2G28560.11.7e-1825.07 DNA repair (Rad51) family protein[more]
BLAST of ClCG05G002360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075500|ref|XP_008438178.1|4.2e-18194.51PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis melo][more]
gi|449432271|ref|XP_004133923.1|9.4e-18194.22PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis sativus][more]
gi|659075498|ref|XP_008438177.1|5.2e-17992.63PREDICTED: DNA repair protein RAD51 homolog 3 isoform X1 [Cucumis melo][more]
gi|778677460|ref|XP_011650791.1|5.7e-17893.64PREDICTED: DNA repair protein RAD51 homolog 3 isoform X2 [Cucumis sativus][more]
gi|1009142354|ref|XP_015888679.1|7.5e-14674.57PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR016467DNA_recomb/repair_RecA-like
IPR020588RecA_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
GO:0008094DNA-dependent ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0007141 male meiosis I
biological_process GO:0007143 female meiotic division
biological_process GO:0045003 double-strand break repair via synthesis-dependent strand annealing
biological_process GO:0042148 strand invasion
biological_process GO:0010212 response to ionizing radiation
biological_process GO:0002949 tRNA threonylcarbamoyladenosine modification
biological_process GO:0006312 mitotic recombination
biological_process GO:0000730 DNA recombinase assembly
biological_process GO:0016444 somatic cell DNA recombination
biological_process GO:0070192 chromosome organization involved in meiotic cell cycle
biological_process GO:0006308 DNA catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0000794 condensed nuclear chromosome
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0000400 four-way junction DNA binding
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0000150 recombinase activity
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0008094 DNA-dependent ATPase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004520 endodeoxyribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G002360.1ClCG05G002360.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51, C-terminalPFAMPF08423Rad51coord: 72..335
score: 3.6
IPR016467DNA recombination and repair protein, RecA-likePIRPIRSF005856Rad51coord: 1..339
score: 1.6
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROFILEPS50162RECA_2coord: 84..273
score: 54
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 85..335
score: 9.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 86..334
score: 2.38
NoneNo IPR availableGENE3DG3DSA:1.10.150.20coord: 8..47
score: 4.
NoneNo IPR availablePANTHERPTHR22942RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBERcoord: 1..342
score: 7.1E
NoneNo IPR availablePANTHERPTHR22942:SF14DNA REPAIR PROTEIN RAD51 HOMOLOG 3coord: 1..342
score: 7.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G002360Csa3G126250Cucumber (Chinese Long) v2cuwcgB222
ClCG05G002360MELO3C006201Melon (DHL92) v3.5.1mewcgB427
ClCG05G002360Cla021319Watermelon (97103) v1wcgwmB286
ClCG05G002360Cla97C05G082870Watermelon (97103) v2wcgwmbB229
ClCG05G002360Bhi01G000176Wax gourdwcgwgoB442
ClCG05G002360CSPI03G09670Wild cucumber (PI 183967)cpiwcgB226
ClCG05G002360Cucsa.257540Cucumber (Gy14) v1cgywcgB451
ClCG05G002360CmaCh06G011430Cucurbita maxima (Rimu)cmawcgB737
ClCG05G002360CmoCh06G011690Cucurbita moschata (Rifu)cmowcgB743
ClCG05G002360Lsi05G019490Bottle gourd (USVL1VR-Ls)lsiwcgB335
ClCG05G002360Cp4.1LG08g02080Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G002360CsGy3G009760Cucumber (Gy14) v2cgybwcgB203
ClCG05G002360MELO3C006201.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G002360Carg06375Silver-seed gourdcarwcgB0935
ClCG05G002360CsaV3_3G009800Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G002360Wax gourdwcgwgoB416
ClCG05G002360Wax gourdwcgwgoB428
ClCG05G002360Watermelon (Charleston Gray)wcgwcgB156
ClCG05G002360Cucumber (Gy14) v1cgywcgB617
ClCG05G002360Cucurbita maxima (Rimu)cmawcgB233
ClCG05G002360Cucurbita maxima (Rimu)cmawcgB319
ClCG05G002360Cucurbita moschata (Rifu)cmowcgB219
ClCG05G002360Cucurbita moschata (Rifu)cmowcgB315
ClCG05G002360Wild cucumber (PI 183967)cpiwcgB494
ClCG05G002360Cucumber (Chinese Long) v2cuwcgB470
ClCG05G002360Melon (DHL92) v3.5.1mewcgB122
ClCG05G002360Watermelon (97103) v1wcgwmB309
ClCG05G002360Cucurbita pepo (Zucchini)cpewcgB138
ClCG05G002360Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G002360Bottle gourd (USVL1VR-Ls)lsiwcgB022
ClCG05G002360Cucumber (Gy14) v2cgybwcgB431
ClCG05G002360Melon (DHL92) v3.6.1medwcgB117
ClCG05G002360Silver-seed gourdcarwcgB0220
ClCG05G002360Silver-seed gourdcarwcgB0602
ClCG05G002360Cucumber (Chinese Long) v3cucwcgB490
ClCG05G002360Watermelon (97103) v2wcgwmbB234