Cucsa.252100 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.252100
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Bushy growth protein
Location	scaffold02229 : 1096900 .. 1102791 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTAGGGTTTAGAAATGGTTTAAACGCCAATTGGCGATCACATTTCTTTAGGATCGAATCGCTCTCAATCCTACACCCCTTGTCTGGAAGCGCCAATGATTTATCTTTGAAACCTCATATCCCCTACTGATATCTTCTAAATTCAATCGCCAACCCTTATAATTTTTTTTTAAATTCCTACAAAATTAAGAGAGTCGGTTACGGATTTCACCATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATGTGAGTTCTTTCTCTCTTTCAACTCCATCTATCAATTCTTCTTCTTTTCATTTATTTCTCTTTCTTTATGTTTTCAATCTCTATCGAAGTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGGTAATTCATTACCTTGCTCCTACTTCTTATGTTTTTTTTCTTTTTTCTTTTAAAGCAATGTTGAGTCATGTGTAGGAGAATAGCTTATGCTTTTGATTTTTGAGTTTAAGGTTTTCTTTTTTCTCCCCAAACATATGCTTTTTGACATGGAAAAACTGAATTAATCACTTGCCCTTGCCCGCTGTGTTGCTGATACTATAGTGAAAGACTTTGCGAATTGAATTAATCCTCCATTGTGCTTCTTCGTTTTGGTATAGTATTTAGGCCTCAAATCGGTGTTTTTGAAAGTGCTTAAATGGCACACTAAAAGAACTTATAAGCGTGAGGCCTAAGTTTGTTCTCTAGTAAAATTAAAGTTAGATTAGATTACATGTTTGGTCTATGAACTTTTAGGTTTGTCTTTTGTGTGTAATAGAAACTTAACCATAAACTTAAATAAGTACTTGACAAATTTTTTACCTTTCAATTTTTTTTTTGAAATATAGGTCTATGATGTATGTGAGATTTTTTTAAAGAACTTTTTTTTTATAATTCACGGATCTACTAAACGAAAAATTGAACTTTGTGTCTTACGAGCCATTAGATGTTCAATTTCGTATACGTTATGTGAATTTTGAATAATGTAATAAAAGTCATAGGACCTATTAGATATGAACTTAGAAGCTCAAGGACTTGTTAGACAAAAAATTGAAAGTTTTGAAACCTATTAGATACTTTTGAAAGTTTAGAGATTAAAAGTGTAACTTTAAACTCGTACATACAAAAAGTAGTATTATGAATGATAAGATATTGAAAAATTTAAGAAATTAGAGTTCTTTTTTGGGTAAGAGATAAGAGTTGTGGAGAAAAATAAATATTTTCTTAAAGAATATCTGTTAGTTTCTTCTTCTTTGAAGGATTTAAAAAGAAATTAAAAACAACGATCTTCATGCACTGAGGGGCCTGGGCGTACTTCATTAATATTTAATGGTGTCTTGCTTGAAGCGCCTAGGATTTTTAAGGCACTGCTCGAAATAATATTTCTGTAGGTATAAGAATTAACCACATCCGCCATTATTTTCATAGCCGGCCCACCAATCTTCAAAGTGGTTTCGTCCAAAGACAACATGAGTTCTTAAGGTCACGTTTTATAACAATTGTTTTTTATTTTTGAAAATTGTACTTGTTTCTCACAACTTCTATACATAGTCATCATCTTTCTTAAGAAAATATTTGAAGTCTTAACCAGATTCCAAAAACAAAAACAAGTTTTTAAAAAACTATCTTTCTTAAAATTTGGAAGTATAACAAAACAAAGAAACTCATAGGTGAAAGTAGTGTTTATTTATTTAATTTTAAAGAACGAAATACCAAATGGTTATCAAACAAGGCCCAATTTTTTTACCATGAGAGCTTGAGTCTAGGAGTATAGAGGTTATCTTAGTACATTCCAAAACCATAGGCACCTTTGTGGCTTAGATTGAAAATGCCTGTTTTGCACTTTTGATAATATATTCAATATCATCATCATAATTTATGTTTATTCTAGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAAGTAAGGACAATAGTCATCCGAACCTCCATCTCTCATTCTTCATGGATTTGAATGGTCAGCGTCAGCCTAAACCATGTTTCCTTTACATATTAAAAACAAAACAATGAAGTTTTGGAGAAGTGTTGAACAAAACACTGAAATCTTTGTTCTTTTTATTAATATTTCTGAATTAAAAAATAACAGCTTAAACTTTAGCTTTATACTAAGGATAGTCATAAGGGCATTAGGTGACGTATTACCTTTACAGCTGGTTGCCCAAAACTTGAAATTTCTACATTTCAGCTGCAATTTGAAGACTTAAAGCACAGTCAGCTAACTAATAGTAACCAGTACAGATGCTAAATAAATACATCAAATTCCCTCCTCCTAATAAAAACTCGTCCTCGAGTTTTACGCTGAAATTTGCGGCTGGTTGGGTGGAAAATATTCAAAGATATCGGCTATGTTGAAGATATGATTGATATGTATGTGATCCTGTAAATCAATCTCGTATGCATTGTTCCCGAGTTTCTTTACTATTCAATAAGGTTTTATCTTTTTTGGCTGTAATTTACTGTATTTTCCAGCTGGAAGTCTTGCCTTTTGAAGGTATATCATGACTAGATCTTCTTCTTTAAATTCTTTGAATCTTCTACGTTTGTCGGCTTGTTATAGCCTTCATTCATCTACTCTAGTTGATATACTACATTTTTGTGCAATTTTGCTATCCTTTCCACCATGTTCTCGGCTTTCATGCTAAGATCAACATTAGAAGTAATATTAGCAAGGTCATCAGTTAATCTAGGTAATTTATTGTAACAATCTCAAATGGTGACTTCCCTGTTGATCTATTCTTCATATGATTGTAGGCGAACTTGGCTTGTGCTAAGACGAGGTCCCATTGTTTAGTTTTGTTTCCCCCGATTCATCTTATGAGGTTGGCTGGGGTTCTATTGGTGACTTTGGTTTGACCATACCCCTTTTGAGTTCTTGGAAGTCCTAGGATGTGAGTTGTAGGTTGGTTAATCGGGATGTGACTAAGGCGTTCACACCCACCTCTAATTGGCAAGCCACTTGTTCCAATGTGAGTTGTAGGTTGGTTAATCGGGCATTCATCTCTCCCACTGCCACTTCAACGGCCAACAGTCGTCTGGTTGAAGTCCTCAGGGAAAGAGTCTCTGGTTCCAAGGGTTGCTCGTCGACACCCTTTCCTTTATTGGCGTTGGTTGGGTTCCTTCCCACCATGAGTCCCTTCTTCAAGAGCTCTGATACCGAGTTGATGAAGTCTTGGAGAAGTGTTGGAACAAAACACTGAAATCTTTAATCTCTTATTAAAATTTCTGAATTAGAAAATAACAGCCTAAACCCTTACAACCGGTTGGCCAAAGCTTTTATACTAAGGATAGTCATAAGGGCAGTAGGTGACTTATCACCTTTACAACCGGTTGGCCAAAACTAGAAATTACTAATTCCAGCAGCAACTTAAAGACTTAAAGCACAGTCAGCTAACCAATATTAACCAATACAGATGCTAACTAAATACATTACAAAACCTTCAAACTTAAATCAATACCTTTAATCAAATCTTGATCTGCCATCAAATTCACTCATATATTTTCTTTGGTTTTTGCTTATCAGTCACAGCTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGGTTTGTCTTGTTGGCGTTTTGGTATCGATCTCTTGATTACTTCCTCCCTTTATCATTATTCTACAGCTTGATGCCACATAACTCAATTCTGTTTCTTTCCCAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGTAAAGTCGAACGTACTCTTGATACATTTGACTGGAACATATATATTTATTAAGCTTACTTGTGCATTATGATATGCCTTTTAGGACTTGAACAACTATGAGAGCGATCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGAGTAAGTGAAGTACAATTGAATTTGTAAATGTACAAAATAATAGAACCTTTTGTTCCAAGTAATTTGGTTTCTTCAGTCATGAAAAGGCATGTACTTTAAAGGGATGGATTGTCAATGAGCTATTTCCATCTAGTGCCCTCCTGTATGTGTTTTTCTCCAACTGTTTGATACAATGAGAATTTCATTTATTTTTGTGAGGTAGCCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGGTTTGTTTTTCCTTTTCCAAATGACTATATATATATTCTCTAGTTCTGTTAGAAATCTGAATGATTTATTTCATGACTGCATCTTCATGTGTCCATGTTCCAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCAGTAAGGTATCAATTTAGATATTCTAAACTGTGCATTGTTTCTTGTTTTCTTTGTAATCAGCTGCGTTGCAGCGAGACTAAATGTTTACCCTTTGATCGTGCCTTTCTCTGTTTGCAACAGTAAAACTGGAGGTGCTTCAGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGTTAGTCTATTCCCTATTTATCTATTTATTATTATTATTATTTTGGAATGATTAGTCTATCCCTTGTTGCTTATGGATTTTCCTTTTATTTTCTCTCTCTTATCTAACCTAAGAAGTATATGGTATATAATTCGTACATGATTATTTAATACTGCCAGTTATGTTTGTTTCCTGGTATCGTGTGTCTTTATCTTCAAGAGAGAGAAACCCATGGTTTTTCAACTTCAACCTAGAAGTTTAGGGTGTTTTTGGTTCTTGGGAATCATAAGGTGCTCATGTGAATGACAACTTATCTCAATTTTGAAAAAGATTCCCACATTTATGAGATATCTAGACATGCTGAGATGTCTTTCATATGCAGGTATCTCATTTCCATAACACTTAGTGCGGTTATGGGTATCTATATTTTGGGCAAAAAGAAAAAGTTATAATTTGTTCCTTGTGCCCTGCTTTCATTTTTTCATAAGATTAGAGCATACTTTTTTAATTTTAATTTTTTTAGGTAGTAGTTTATATTTATTATCAATGTTCTTTCTGTTACTGGTGAATCTAGACTATTTTATTTTCCAGAATCGGATAATTCACACCCCTATCTTAATGCCATTTACACTTATTATCTATTCTCAAGTTTTATTTTAGAAGTTGGTTAAAAAGTACATTAGCCAATGGCTTGTAAAGTTATAAAAATTTGATGCTAATGACAGTATACACTTAAATGCAAAACAGGAAAAGGAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACAGCTCGATAATATACTCTTGGTTGATGTTGATCTTATCGCTTCTATCGTCAAACAAGGTTGGCTTTCTTAGTGGAGGTAAATTATTCAACATGGAGTGGAACTGTTCTTGACGGTTTAACACATCAATTAACATTTACTTAATGCCCCCAAGTTAAAGGCTTTTAGAGCTATTCTTCATAGAGTATATAACCTATAGAGCAGATTCTACTCAAGTAAGGTCGAAGCAGGGATATCAATTCTGATACTAAAGTGTTCATAGGGTAGATATTTTGACTATGTAGAGTGGTAACTTCTGATATGAGTTCTTCCCATTCTTATTTGTTGCTTTTGGTAACATACTCTCGTAACCATACAAATGAAGTAAAGATATTCATATATGCCAAAAGTTGTTTGTTTC

mRNA sequence

TCCGTAGGGTTTAGAAATGGTTTAAACGCCAATTGGCGATCACATTTCTTTAGGATCGAATCGCTCTCAATCCTACACCCCTTGTCTGGAAGCGCCAATGATTTATCTTTGAAACCTCATATCCCCTACTGATATCTTCTAAATTCAATCGCCAACCCTTATAATTTTTTTTTAAATTCCTACAAAATTAAGAGAGTCGGTTACGGATTTCACCATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAATCACAGCTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGCGATCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGACCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCAGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGGAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACAGCTCGATAATATACTCTTGGTTGATGTTGATCTTATCGCTTCTATCGTCAAACAAGGTTGGCTTTCTTAGTGGAGGTAAATTATTCAACATGGAGTGGAACTGTTCTTGACGGTTTAACACATCAATTAACATTTACTTAATGCCCCCAAGTTAAAGGCTTTTAGAGCTATTCTTCATAGAGtatataacctatagagcagattctactcaagtaaggtcgAAGCAGGGATATCAATTCTGATACTAAAGTGTTCATAGGGTAGATATTTTGACTATGTAGAGTGGTAACTTCTGATATGAGTTCTTCCCATTCTTATTTGTTGCTTTTGGTAACATACTCTCGTAACCATACAAATGAAGTAAAGATATTCATATATGCCAAAAGTTGTTTGTTTC

Coding sequence (CDS)

ATGAAAGCTTCCGCCTCGCCTCATTCAAAAGCTCCATTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTCCCAATTCGTTTGGACATTGAAATTGACGGTCAGAGGTTCAAAGATGCTTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAACTTCCTCCGGCATTTATAACACAAATTGCACAATCCATTCAATCACAGCTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAAATCATTCCAATCAAGCTTGATCTTCGAGTGAACAATACACTCATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGCGATCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGCATTGACGACCCTGAAGTTGGACCTGCAATTGCTGTTGCCATTAGAGAACAGCTCTATGAGATAGCAGTGCAAAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGTCGCCGAGGGTTTGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCAGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGGAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGACAGCTCGATAA

Protein sequence

MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR*

Homology

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BLAST of Cucsa.252100 vs. Swiss-Prot
Match: BSH_ARATH (Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BSH PE=1 SV=2)

HSP 1 Score: 388.7 bits (997), Expect = 4.8e-107
Identity = 189/240 (78.75%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RTLCKDLG++DPEVGPA+A AIREQLYEIA+Q+VASARESR+SKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            +H   SK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Sbjct: 181 SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR 240

[Close]

BLAST of Cucsa.252100 vs. Swiss-Prot
Match: SNF5_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 5.8e-20
Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = 1


Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 164 HDPAVIHENAAQSEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 223

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 224 LAFVPAIASAIRQQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 283

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 284 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 312

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BLAST of Cucsa.252100 vs. Swiss-Prot
Match: SNF5_DANRE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A OS=Danio rerio GN=smarcb1a PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.9e-20
Identity = 59/151 (39.07%), Postives = 86/151 (56.95%), Query Frame = 1


Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 159 HDPAVIHENASQQEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSP 218

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
             F+  IA +I+ Q+  + +    D    +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 219 LTFVPAIASAIRQQIESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 278

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 279 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 307

[Close]

BLAST of Cucsa.252100 vs. Swiss-Prot
Match: SNF5_XENLA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.9e-20
Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 1


Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 164 HDPAVIHENAAQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 223

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  IA +I+ Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 224 LAFVPAIASAIRQQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 283

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG+   E    IA +IR QL
Sbjct: 284 PEKFALKLCSELGLGG-EFVTTIAYSIRGQL 312

[Close]

BLAST of Cucsa.252100 vs. Swiss-Prot
Match: SNF5_TETFL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Tetraodon fluviatilis GN=smarcb1 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.9e-19
Identity = 58/151 (38.41%), Postives = 87/151 (57.62%), Query Frame = 1


Query: 8   HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP 67
           H  A        +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P
Sbjct: 159 HDPAVIHENASQSEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNP 218

Query: 68  -AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESD 127
            AF+  I  +I+ Q+  + +    +  T +++I IKL++ V N  + DQF WD++  E+ 
Sbjct: 219 LAFVPAIPSAIRQQIESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENS 278

Query: 128 PEEFSRTLCKDLGIDDPEVGPAIAVAIREQL 158
           PE+F+  LC +LG    E    IA +IR QL
Sbjct: 279 PEKFALKLCSELG-QGGEFVTTIAYSIRGQL 307

[Close]

BLAST of Cucsa.252100 vs. TrEMBL
Match: A0A0A0L868_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of Cucsa.252100 vs. TrEMBL
Match: A0A068UT17_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.5e-112
Identity = 196/232 (84.48%), Postives = 223/232 (96.12%), Query Frame = 1


Query: 9   SKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 68
           S+ P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNPSDPDSEVVVFAKRTVKDLKLPPA
Sbjct: 10  SRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 69

Query: 69  FITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPE 128
           FITQIAQSIQSQLTEFRS+EGQDMYTGE+++PIKLDLRVN+TLIKDQFLWDLNN+ESDPE
Sbjct: 70  FITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNFESDPE 129

Query: 129 EFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK 188
           EF+RT CKD+GI+DPEVGPAIA+AIREQLYEIAVQ+VASA+ESRM KKGR+GFEH+P+SK
Sbjct: 130 EFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEHIPISK 189

Query: 189 TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 241
            GG +VDLVK FG++SSV+RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 190 AGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

[Close]

BLAST of Cucsa.252100 vs. TrEMBL
Match: D7T6B3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-110
Identity = 195/240 (81.25%), Postives = 221/240 (92.08%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S  SK P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+PIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RT CKDLG++DPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            EH+P SK  G ++DL+KLFG++SS++RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

[Close]

BLAST of Cucsa.252100 vs. TrEMBL
Match: A0A0B2SIX3_GLYSO (Chromatin structure-remodeling complex protein BSH OS=Glycine soja GN=glysoja_023592 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 7.2e-110
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   + P KFR+PTAENLVPIRLDIEI+GQR+KDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQL+EFRS+EGQDMY GEKI+PIKLDLRVN+TL+KDQFLWDL
Sbjct: 61  KDLKLPPAFVTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+R  CKD GI+DPEVGPAIA AIREQLYEIA+Q+V SARESRMSKKGRRG
Sbjct: 121 NNFESDPEEFARIFCKDTGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            E+ PVSK G A+VDLVKLFG +SSVVRKRK+WD+YEPIVDLLSNEEVDALEAKEER  R
Sbjct: 181 AEYTPVSKGGAAAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 240

[Close]

BLAST of Cucsa.252100 vs. TrEMBL
Match: D7RJ53_SOYBN (SNF5 OS=Glycine max GN=SNF5 PE=2 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 7.2e-110
Identity = 199/240 (82.92%), Postives = 219/240 (91.25%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   + P KFR+PTAENLVPIRLDIEI+GQR+KDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQL+EFRS+EGQDMY GEKI+PIKLDLRVN+TL+KDQFLWDL
Sbjct: 61  KDLKLPPAFVTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+R  CKD GI+DPEVGPAIA AIREQLYEIA+Q+V SARESRMSKKGRRG
Sbjct: 121 NNFESDPEEFARIFCKDTGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            E+ PVSK G A+VDLVKLFG +SSVVRKRK+WD+YEPIVDLLSNEEVDALEAKEER  R
Sbjct: 181 AEYTPVSKGGAAAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 240

[Close]

BLAST of Cucsa.252100 vs. TAIR10
Match: AT3G17590.2 (AT3G17590.2 transcription regulatory protein SNF5, putative (BSH))

HSP 1 Score: 384.8 bits (987), Expect = 3.9e-107
Identity = 190/242 (78.51%), Postives = 218/242 (90.08%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKR 60
           MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKR
Sbjct: 1   MKGLVSTGWKGPVKFRIYRPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKR 60

Query: 61  TVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLW 120
           TVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIPIKLDLRVN+TLIKDQFLW
Sbjct: 61  TVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLW 120

Query: 121 DLNNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGR 180
           DLNN+ESDPEEF+RTLCKDLG++DPEVGPA+A AIREQLYEIA+Q+VASARESR+SKKGR
Sbjct: 121 DLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGR 180

Query: 181 RGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERT 240
           RG +H   SK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER 
Sbjct: 181 RGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERH 240

[Close]

BLAST of Cucsa.252100 vs. NCBI nr
Match: gi|449459804|ref|XP_004147636.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis sativus])

HSP 1 Score: 477.2 bits (1227), Expect = 1.6e-131
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of Cucsa.252100 vs. NCBI nr
Match: gi|659077056|ref|XP_008439008.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-130
Identity = 238/240 (99.17%), Postives = 239/240 (99.58%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNT+IKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
           FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]

BLAST of Cucsa.252100 vs. NCBI nr
Match: gi|661884808|emb|CDP11571.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 412.1 bits (1058), Expect = 6.5e-112
Identity = 196/232 (84.48%), Postives = 223/232 (96.12%), Query Frame = 1


Query: 9   SKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 68
           S+ P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNPSDPDSEVVVFAKRTVKDLKLPPA
Sbjct: 10  SRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDLKLPPA 69

Query: 69  FITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDLNNYESDPE 128
           FITQIAQSIQSQLTEFRS+EGQDMYTGE+++PIKLDLRVN+TLIKDQFLWDLNN+ESDPE
Sbjct: 70  FITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNFESDPE 129

Query: 129 EFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK 188
           EF+RT CKD+GI+DPEVGPAIA+AIREQLYEIAVQ+VASA+ESRM KKGR+GFEH+P+SK
Sbjct: 130 EFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEHIPISK 189

Query: 189 TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 241
            GG +VDLVK FG++SSV+RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 190 AGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

[Close]

BLAST of Cucsa.252100 vs. NCBI nr
Match: gi|225432226|ref|XP_002270283.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera])

HSP 1 Score: 406.8 bits (1044), Expect = 2.7e-110
Identity = 195/240 (81.25%), Postives = 221/240 (92.08%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S  SK P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+PIKLDLRVN+TLIKDQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+RT CKDLG++DPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            EH+P SK  G ++DL+KLFG++SS++RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

[Close]

BLAST of Cucsa.252100 vs. NCBI nr
Match: gi|951002249|ref|XP_014507288.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Vigna radiata var. radiata])

HSP 1 Score: 404.8 bits (1039), Expect = 1.0e-109
Identity = 198/240 (82.50%), Postives = 218/240 (90.83%), Query Frame = 1


Query: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60
           MK   S   + P KFR+PTAENLVPIRLDIEIDGQR+KDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1   MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120
           KDLKLPPAF+TQIAQSIQSQL EFRS+EGQDMY GEKI+PIKLDLRVN+TL+KDQFLWDL
Sbjct: 61  KDLKLPPAFVTQIAQSIQSQLLEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180
           NN+ESDPEEF+R  CKD+GI+DPEVGPAIA AIREQLYEIA+Q+V SARESRMSKKGRRG
Sbjct: 121 NNFESDPEEFARIFCKDMGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG 180

Query: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240
            E+ P+SK G  +VDLVKLFG +SSVVRKRK+WD+YEPIVDLLSNEEVDALEAKEER  R
Sbjct: 181 AEYTPISKGGAVAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 240

The following BLAST results are available for this feature:

BLAST of Cucsa.252100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BSH_ARATH	4.8e-107	78.75	Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BS...	[more]
SNF5_XENTR	5.8e-20	39.07	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_DANRE	9.9e-20	39.07	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_XENLA	9.9e-20	39.07	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_TETFL	4.9e-19	38.41	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of Cucsa.252100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L868_CUCSA	1.1e-131	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1	[more]
A0A068UT17_COFCA	4.5e-112	84.48	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1	[more]
D7T6B3_VITVI	1.9e-110	81.25	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=...	[more]
A0A0B2SIX3_GLYSO	7.2e-110	82.92	Chromatin structure-remodeling complex protein BSH OS=Glycine soja GN=glysoja_02...	[more]
D7RJ53_SOYBN	7.2e-110	82.92	SNF5 OS=Glycine max GN=SNF5 PE=2 SV=1	[more]

BLAST of Cucsa.252100 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17590.2	3.9e-107	78.51	transcription regulatory protein SNF5, putative (BSH)	[more]

BLAST of Cucsa.252100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459804\|ref\|XP_004147636.1\|	1.6e-131	100.00	PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi...	[more]
gi\|659077056\|ref\|XP_008439008.1\|	1.4e-130	99.17	PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi...	[more]
gi\|661884808\|emb\|CDP11571.1\|	6.5e-112	84.48	unnamed protein product [Coffea canephora]	[more]
gi\|225432226\|ref\|XP_002270283.1\|	2.7e-110	81.25	PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera]	[more]
gi\|951002249\|ref\|XP_014507288.1\|	1.0e-109	82.50	PREDICTED: chromatin structure-remodeling complex protein BSH [Vigna radiata var...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006939	SNF5

Vocabulary: **Cellular Component**
Term	Definition
GO:0000228	nuclear chromosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006338	chromatin remodeling

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000228	nuclear chromosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.252100.1	Cucsa.252100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006939	SNF5/SMARCB1/INI1	PANTHER	PTHR10019	SNF5	coord: 1..240 score: 1.4E
IPR006939	SNF5/SMARCB1/INI1	PFAM	PF04855	SNF5	coord: 100..240 score: 9.9E-18coord: 20..86 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.252100	Cla021836	Watermelon (97103) v1	cgywmB479
Cucsa.252100	Csa3G171220	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.252100	MELO3C006760	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.252100	ClCG05G006940	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.252100	CSPI03G15440	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.252100	CmaCh14G015520	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.252100	CmaCh06G015930	Cucurbita maxima (Rimu)	cgycmaB0727
Cucsa.252100	CmoCh14G015880	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.252100	CmoCh06G015880	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.252100	Lsi05G013780	Bottle gourd (USVL1VR-Ls)	cgylsiB416
Cucsa.252100	Cp4.1LG03g12080	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.252100	Cp4.1LG08g05440	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.252100	MELO3C006760.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.252100	CsaV3_3G015610	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.252100	Cla97C05G088590	Watermelon (97103) v2	cgywmbB452
Cucsa.252100	Bhi01G000832	Wax gourd	cgywgoB522
Cucsa.252100	Carg19590	Silver-seed gourd	carcgyB0329
Cucsa.252100	Carg25662	Silver-seed gourd	carcgyB0833

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None