Cp4.1LG08g05440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g05440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBushy growth protein
LocationCp4.1LG08 : 835108 .. 839509 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATTTTAAATTATAAGAGCTAAATTGAAAAATTATCCACAACCACTCTCGCATTTAAAAAATATTTTTGAATTTTGCAGAAAATTGAAGAGAGAAAAAAAAAAAGAAAAAAAAGGCAAGGGGCCAAGACGGGGAAGCGCACTGCAGTCGTTCCGAAAGCTACATAACCAAAACGCTCGAAACATACACAACGGCAGAGTCGATCAACCATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGGATGTGAGTTCTTTTATCTCTTTCTACTTCATCATTGTTCGTTTCATTGATTCCTCTTTCTTATGGCTTTATATTTGGTTTAATGTTCCCAATCATTATCAAAGTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATCGAAATTGATGGTCAGAGATTCAAAGATGCCTTCACTTGGAACCCTACTGGTAATTTCGTTTATTTATATCGCTCATGCCTGTTAATGTTTCCTTTTCAATCAATGATGTTTGATGTGTAGCGTAGTTTCAGCTCTGACCGTTCGAATTTAGGGTTTTTTTGTCCCTAAATTTATGATTTCTGACTTGGAAGACTGAATTAATCCCTGTTTTACCGATGATATTGGCGTATTGTTGATTCTTTAGTGAAAAACTTGCATACTTCATTTAGTTTTTATGTACGAGTTTAATGTCTTCCATGAACTTTTAATTATGTACATAATAAATATATTAAATATAAAAAATATTGAATAGGTCAAGAATTCAAAGTTCAAAGACTATTAGACACAAAATGGAAGTTTTGGGACATATTTTTAAATTTAGAGATCTATGTTAGACACAAACTTGAACATTCAAGGGCTTGGCTTGTGATTTTAACTAAAGTTTATGCATATATATAAAATAGTATTTATGAATAAGATATTTAATGTCCAACCTTAACCTTAAGATTAATAGAGGTAAGAGTTCCATCATTGATATTACTTGTTTTCTCGTCATTCTTTTCTCTACAATGAGTTTTATGGTTCTTAAGAAAACATTTAAATTCTTATGCAAATTTCAAAACGTACCAAAACTTTTCGACAACGTTGTTTAGGGAGGTAAATGATTTTTTTGGATATGGCCTTAACGTACCACCCTTTCAAGAACGCAAAAGCCCTATTATGGAAAAACCTCATCATGGCTTTCTTTTGGAATCTGTGGAAAGAAAGAAATTAGAGAATATTTGCAGAAAAGACACAGACCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACGGTCTAATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAATTGGGAAGGTCTTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACCCATCAATGAAATTGTCTCTTATATATATAAAAAAATAATAATAATAATAAAATTTTTTGAAAACTACATTTTTAGTTTTCAAAACTCAGCTAGGTTTTTGAAAACACAGGTAAAAAGTAGGTAACAAAACTAGAAAACCCATAGAGGCTTAATTTTGAAAAACTAAAAACCAAAAACCAAATAGTTATCGAACAGGATCTAAGTTATTTAGGTTTTAACACGGGAGCTTGAACCTAGGGATTCAGTGGTTATCTTGAAACATCCCAAAACAGTAGGCACTCTTGAAGGTTAACTTGAAAATGTGTTTTTTGCTCTTGTGATAGTATCTCCAATTGCATGATTATATCTTATGTGTACTCTAGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAAGTAAGAACAATGGTTATCCGAACCTTCCTCTCCCATTCTTCAGGATTTCAATTGTCAGCCTAAACCATGTTTTCTAGTAATTAAGAGCAATTTTTGTTTTAACTTACATGAATTTTTGTAATGAAATATTGACATGCCATCAAATTTAATTATGTTTACTCTTGGCTTTTGCTTATTAGTCACAACTTACAGAATTCAGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTACAATCAAGGTTTGTCTAATTGGCATTGCAATACCAATCTCTTGACAACCTCCTCCCTTTATCATTATCTTACAGCTAGGTGCAAAATAATGCAATTCTTTTTCTTTTCCAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGTAAAGTTGAACATACTCTTGATACATTTGACTGGAAAAAATATTTATTAAGCTTACTTGTGCAAACTGATATGTCTTTTAGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCCGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGAGTAAGCAAAAATCAATTGAATTTGAAAATATACAAAATAAATTCTTTTGTACATGTAAATTGGTTCCGTTGGTGATGAAAAGGCAGCATCTCACTTCGAAGGGATGGATTGTCAATGAGTTATTTTCACCTAAAGTCTCCTGTAATTGTTTTTTTTCCCCCCAACTATTGGATACCATGAGAATTTCATTTATTTTTGTGAGGTAGCCTGCAATTGCTGTTGCGATTCGAGAGCAGCTTTATGAGGTTTGTTTTTTCTTACCTGTTAAGCCTCCCTTTCGTAAAGACAATACTTTTTACAGTTCTGTTCACAATCTGAATGATTTATTTCGTCACTGCATCTTCATTGTGTCTATGTTCCAGATAGCCGTGCAGAACGTTGCTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGGTATATTCATTCAAACTTGTGCGTTGTTCCTCATTCTCTTTTGTAATTGGGACTTGGAATGAAACTAAATATTCACCTTCACTCGTTTGTCTTTTGCAATTGTGCTTCTTTATCTGTTTGGTGCAACAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGTGAGTATTATTTTATTAATTTTTTTGAGTAATTACTTTATTCCCTGTTACCATTTTCCTAATATCATACGTTTTATTCTAATTTTTTAGCTTGTAGTTTGTGTTTATTATTAATGTTCTTTCTTTCTAAAATTTATATCTTAAACTTATCTATTCTCAAGTTTTAATATAAAAAATATTCAAAATACAAAGTCACTTGACATGCACTCTTTCGAACAATCTATACAAGTTAATGCACTTGGAGCTTAAATCATTATTCTTTTGGCTGTCTTGGTTTTTGTACCATTTTCATTTGTCAGGGTTGGTGAATTTCGATTGGGAGTGATCTTTTTTTTTTCTAAATTAAAAATTAACTCATGCTATTAGTGTATTTCTAATATTCGTTGCAGCTAACTTGTAAAATTATAAAAATTTGATGCTTATGGAAGTATGCACTAAAATGCAACAGGAAAAGAAAGGACTGGGACATCTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAACACGTTGCAAGTAGTTGAGAATATCACTCGTATCGTCATCGAACAGTGTCGACTTTTCCAGTGGAGGTAAATTATTCAACCCAGATGAAGTTCGTAGGCAATTGTTCTTGCTATCTTAACACATACTTAAGAGTTCTTTAACTTCCAAGTTAAAAGCTTTCGAATCGATTCTTCATCGACTGTACGTAATCCCTGTCTAGCTCTCAAGTAGGGACATGAACTCTCTGATAAGTTCACATGGTAGATCTTTTGACAAGTTTTACTGTATTGGCATGGACTATATCTCACTAGAGAAGGGTAGACCTTCTGAAATGAGTTTTCATTCTATTTCTTGCCTTTGATTTCATAATCAAAATCAGAACCATTCAAAAAGTGTTGAATGACTCATTAAGAAGGATTACACTGTTCCATTTAGCTGATAAGTGAAAAGTTCACTGATAGAATCATCTGGGCTTTTCCACAATGCTCCATTTTCCTCTTTGGAAGTTGGGATATGGGTTGTGGCTAGGCTTTGGTGATAACATTCCATAGCAGGGTCGAAGAGAAACTCTCTTACTTTTGGATATGGCTGAAAATTTTATTATGAGACTCTCTAGGATGGATTCGGTTTCACCTCCACTTCATGTGTTCGATAGAGGAGGACTATTTAGAGGTTTGGAGGTCAATGTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCTCCTCAAGGCTTTAAAACGCGTCTCTTAGGAGAAGGTTTCCACACCCTTATAAATGGTGATTTGTT

mRNA sequence

AAGATTTTAAATTATAAGAGCTAAATTGAAAAATTATCCACAACCACTCTCGCATTTAAAAAATATTTTTGAATTTTGCAGAAAATTGAAGAGAGAAAAAAAAAAAGAAAAAAAAGGCAAGGGGCCAAGACGGGGAAGCGCACTGCAGTCGTTCCGAAAGCTACATAACCAAAACGCTCGAAACATACACAACGGCAGAGTCGATCAACCATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATCGAAATTGATGGTCAGAGATTCAAAGATGCCTTCACTTGGAACCCTACTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTCAGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTACAATCAAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCCGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATTGCTGTTGCGATTCGAGAGCAGCTTTATGAGATAGCCGTGCAGAACGTTGCTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACTGGGACATCTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAACACGTTGCAAGTAGTTGAGAATATCACTCGTATCGTCATCGAACAGTGTCGACTTTTCCAGTGGAGGTAAATTATTCAACCCAGATGAAGTTCGTAGGCAATTGTTCTTGCTATCTTAACACATACTTAAGAGTTCTTTAACTTCCAAGTTAAAAGCTTTCGAATCGATTCTTCATCGACTGTACGTAATCCCTGTCTAGCTCTCAAGTAGGGACATGAACTCTCTGATAAGTTCACATGGTAGATCTTTTGACAAGTTTTACTGTATTGGCATGGACTATATCTCACTAGAGAAGGGTAGACCTTCTGAAATGAGTTTTCATTCTATTTCTTGCCTTTGATTTCATAATCAAAATCAGAACCATTCAAAAAGTGTTGAATGACTCATTAAGAAGGATTACACTGTTCCATTTAGCTGATAAGTGAAAAGTTCACTGATAGAATCATCTGGGCTTTTCCACAATGCTCCATTTTCCTCTTTGGAAGTTGGGATATGGGTTGTGGCTAGGCTTTGGTGATAACATTCCATAGCAGGGTCGAAGAGAAACTCTCTTACTTTTGGATATGGCTGAAAATTTTATTATGAGACTCTCTAGGATGGATTCGGTTTCACCTCCACTTCATGTGTTCGATAGAGGAGGACTATTTAGAGGTTTGGAGGTCAATGTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCTCCTCAAGGCTTTAAAACGCGTCTCTTAGGAGAAGGTTTCCACACCCTTATAAATGGTGATTTGTT

Coding sequence (CDS)

ATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATCGAAATTGATGGTCAGAGATTCAAAGATGCCTTCACTTGGAACCCTACTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTCAGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTACAATCAAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCCGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATTGCTGTTGCGATTCGAGAGCAGCTTTATGAGATAGCCGTGCAGAACGTTGCTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACTGGGACATCTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAA

Protein sequence

MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRGFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR
Homology
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BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match: BSH_ARATH (Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BSH PE=1 SV=2)

HSP 1 Score: 386.0 bits (990), Expect = 3.1e-106
Identity = 189/240 (78.75%), Postives = 217/240 (90.42%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+VASARESRLSKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            +H SASK  G S+DLMKLF  +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Sbjct: 181 SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match: SNF5_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-19
Identity = 56/139 (40.29%), Postives = 85/139 (61.15%), Query Frame = 1 

Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQ 79
           +E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+
Sbjct: 176 SEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIR 235

Query: 80  SQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDL 139
            Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +L
Sbjct: 236 QQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 295

Query: 140 GIEDPEVGPAIAVAIREQL 158
           G+   E    IA +IR QL
Sbjct: 296 GL-GGEFVTTIAYSIRGQL 312

[Close]
BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match: SNF5_DANRE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A OS=Danio rerio GN=smarcb1a PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 1 

Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P  F+  IA +I+ 
Sbjct: 172 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQ 231

Query: 81  QLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLG 140
           Q+  + +    D    +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +LG
Sbjct: 232 QIESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 291

Query: 141 IEDPEVGPAIAVAIREQL 158
           +   E    IA +IR QL
Sbjct: 292 L-GGEFVTTIAYSIRGQL 307

[Close]
BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match: SNF5_XENLA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 56/138 (40.58%), Postives = 84/138 (60.87%), Query Frame = 1 

Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+ 
Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236

Query: 81  QLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLG 140
           Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +LG
Sbjct: 237 QIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 296

Query: 141 IEDPEVGPAIAVAIREQL 158
           +   E    IA +IR QL
Sbjct: 297 L-GGEFVTTIAYSIRGQL 312

[Close]
BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match: SNF5_TETFL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Tetraodon fluviatilis GN=smarcb1 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 1 

Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQ 79
           +E LVPIRLD+EI+GQ+ +DAFTWN  +      +FA+    DL L P AF+  I  +I+
Sbjct: 171 SEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIR 230

Query: 80  SQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDL 139
            Q+  + +    +  T +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +L
Sbjct: 231 QQIESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 290

Query: 140 GIEDPEVGPAIAVAIREQL 158
           G +  E    IA +IR QL
Sbjct: 291 G-QGGEFVTTIAYSIRGQL 307

[Close]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match: A0A0A0L868_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 7.4e-123
Identity = 225/240 (93.75%), Postives = 233/240 (97.08%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNVASARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match: D7T6B3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.7e-109
Identity = 195/240 (81.25%), Postives = 222/240 (92.50%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +SK+P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NN+ESDPEEF+RTFCKDLG+EDPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            EH+ ASK  G ++DLMKLFG++SS +RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match: A0A068UT17_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.0e-108
Identity = 192/237 (81.01%), Postives = 223/237 (94.09%), Query Frame = 1 

Query: 4   SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDL 63
           S   +S++P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNP+DPDSEVVVFAKRTVKDL
Sbjct: 5   STWGSSRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDL 64

Query: 64  KLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNY 123
           KLPPAFITQIAQSIQSQLTEFRS+EGQDMYTGE+++ IKLDLRVN+TLI+DQFLWDLNN+
Sbjct: 65  KLPPAFITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNF 124

Query: 124 ESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRGFEH 183
           ESDPEEF+RTFCKD+GIEDPEVGPAIA+AIREQLYEIAVQ+VASA+ESR+ KKGR+GFEH
Sbjct: 125 ESDPEEFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEH 184

Query: 184 VSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 241
           +  SK GG +VDL+K FG++SS +RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 185 IPISKAGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

[Close]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match: A0A067JYY0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19103 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.5e-107
Identity = 192/240 (80.00%), Postives = 220/240 (91.67%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +S++P KFR+PTAENLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRT 
Sbjct: 1   MKGLPSTSSRAPVKFRMPTAENLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTA 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAF+ QIAQSIQ+QLTEFRS+EGQDMYTGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFVMQIAQSIQTQLTEFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NN++SDPE+F+RTFCKDL IEDPEVGPA+A AIREQLYEIA+Q+VA+ARESRLSKKGRRG
Sbjct: 121 NNFDSDPEDFARTFCKDLDIEDPEVGPAVAFAIREQLYEIAIQSVATARESRLSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            E++ A K GG +VDLMKLF ++ S +RKRK+WD+YEPIVDLLSNEEVDALEA+EER AR
Sbjct: 181 AEYIPAIKAGGTAVDLMKLFSNKYSVIRKRKEWDVYEPIVDLLSNEEVDALEAREERNAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match: A0A022R7Z0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012763mg PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 2.5e-107
Identity = 194/241 (80.50%), Postives = 220/241 (91.29%), Query Frame = 1 

Query: 1   MKS-SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRT 60
           MKS S    +K+P KFRIPTAENLVPIRLDIEIDGQRF+DAFTWNP+DPDSEV +FAKRT
Sbjct: 1   MKSHSPWGTAKNPVKFRIPTAENLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVALFAKRT 60

Query: 61  VKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD 120
            KD KLPPAFITQIAQSIQ+QLT+FRS+EGQDMYTGEKI+ IKLDLRVN+TLI+D FLWD
Sbjct: 61  AKDSKLPPAFITQIAQSIQTQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDNFLWD 120

Query: 121 LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRR 180
           LNN+ESDPEEF++TFCKD+GI DPEVGPAIA++IREQLYEIAVQNV SARESR++KKGRR
Sbjct: 121 LNNFESDPEEFAKTFCKDMGIVDPEVGPAIAISIREQLYEIAVQNVTSARESRMNKKGRR 180

Query: 181 GFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAA 240
           G EH+ ASK  G +VDL KLFG++SS VRKRK+WD+YEPIVDLLSNEEVDALEAKEER A
Sbjct: 181 GLEHIQASKNAGNAVDLFKLFGNKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERMA 240

[Close]
BLAST of Cp4.1LG08g05440 vs. TAIR10
Match: AT3G17590.2 (AT3G17590.2 transcription regulatory protein SNF5, putative (BSH))

HSP 1 Score: 382.1 bits (980), Expect = 2.5e-106
Identity = 190/242 (78.51%), Postives = 217/242 (89.67%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKR 60
           MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKR
Sbjct: 1   MKGLVSTGWKGPVKFRIYRPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKR 60

Query: 61  TVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW 120
           TVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII IKLDLRVN+TLI+DQFLW
Sbjct: 61  TVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLW 120

Query: 121 DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGR 180
           DLNN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+VASARESRLSKKGR
Sbjct: 121 DLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGR 180

Query: 181 RGFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERA 240
           RG +H SASK  G S+DLMKLF  +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER 
Sbjct: 181 RGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERH 240

[Close]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match: gi|449459804|ref|XP_004147636.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 225/240 (93.75%), Postives = 233/240 (97.08%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNVASARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match: gi|659077056|ref|XP_008439008.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo])

HSP 1 Score: 446.8 bits (1148), Expect = 2.4e-122
Identity = 224/240 (93.33%), Postives = 233/240 (97.08%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNT+I+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNVASARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match: gi|225432226|ref|XP_002270283.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera])

HSP 1 Score: 402.9 bits (1034), Expect = 3.9e-109
Identity = 195/240 (81.25%), Postives = 222/240 (92.50%), Query Frame = 1 

Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +SK+P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRG 180
           NN+ESDPEEF+RTFCKDLG+EDPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            EH+ ASK  G ++DLMKLFG++SS +RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

[Close]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match: gi|661884808|emb|CDP11571.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 401.0 bits (1029), Expect = 1.5e-108
Identity = 192/237 (81.01%), Postives = 223/237 (94.09%), Query Frame = 1 

Query: 4   SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDL 63
           S   +S++P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNP+DPDSEVVVFAKRTVKDL
Sbjct: 5   STWGSSRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDL 64

Query: 64  KLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNY 123
           KLPPAFITQIAQSIQSQLTEFRS+EGQDMYTGE+++ IKLDLRVN+TLI+DQFLWDLNN+
Sbjct: 65  KLPPAFITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNF 124

Query: 124 ESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRRGFEH 183
           ESDPEEF+RTFCKD+GIEDPEVGPAIA+AIREQLYEIAVQ+VASA+ESR+ KKGR+GFEH
Sbjct: 125 ESDPEEFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEH 184

Query: 184 VSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 241
           +  SK GG +VDL+K FG++SS +RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 185 IPISKAGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

[Close]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match: gi|747080793|ref|XP_011087659.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Sesamum indicum])

HSP 1 Score: 397.5 bits (1020), Expect = 1.6e-107
Identity = 193/241 (80.08%), Postives = 221/241 (91.70%), Query Frame = 1 

Query: 1   MKS-SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRT 60
           MKS S    +K+P KFRIPTA+NLVPIRLDIEIDGQR +DAF WNP+DPDSE+VVFAKRT
Sbjct: 1   MKSHSPWGTAKNPVKFRIPTADNLVPIRLDIEIDGQRCRDAFIWNPSDPDSEIVVFAKRT 60

Query: 61  VKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD 120
           VKDLKLPPAF+TQIAQSIQ+QL+EFRS+EGQDMYTGEK++ IKLD+RVN+TLI+D FLWD
Sbjct: 61  VKDLKLPPAFVTQIAQSIQTQLSEFRSYEGQDMYTGEKVVPIKLDIRVNHTLIKDHFLWD 120

Query: 121 LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVASARESRLSKKGRR 180
           LNN+ESDPEEF++TFCKD+GIEDPEVGPAIA+AIREQLYEIAVQNV S RESR++KKGRR
Sbjct: 121 LNNFESDPEEFAKTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQNVTSIRESRINKKGRR 180

Query: 181 GFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAA 240
           GFEH+ ASK  G +VDL KLFG++SS VRKRK+WD+YEPIVDLLSNEEVDALEAKEER  
Sbjct: 181 GFEHIQASKASGNAVDLFKLFGNKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNT 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g05440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BSH_ARATH3.1e-10678.75Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BS... [more]
SNF5_XENTR2.9e-1940.29SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
SNF5_DANRE3.8e-1940.58SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
SNF5_XENLA3.8e-1940.58SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
SNF5_TETFL1.1e-1839.57SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
BLAST of Cp4.1LG08g05440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L868_CUCSA7.4e-12393.75Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1[more]
D7T6B3_VITVI2.7e-10981.25Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=... [more]
A0A068UT17_COFCA1.0e-10881.01Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1[more]
A0A067JYY0_JATCU2.5e-10780.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19103 PE=4 SV=1[more]
A0A022R7Z0_ERYGU2.5e-10780.50Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012763mg PE=4 SV=1[more]
BLAST of Cp4.1LG08g05440 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17590.22.5e-10678.51 transcription regulatory protein SNF5, putative (BSH)[more]
BLAST of Cp4.1LG08g05440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449459804|ref|XP_004147636.1|1.1e-12293.75PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi... [more]
gi|659077056|ref|XP_008439008.1|2.4e-12293.33PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi... [more]
gi|225432226|ref|XP_002270283.1|3.9e-10981.25PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera][more]
gi|661884808|emb|CDP11571.1|1.5e-10881.01unnamed protein product [Coffea canephora][more]
gi|747080793|ref|XP_011087659.1|1.6e-10780.08PREDICTED: chromatin structure-remodeling complex protein BSH [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Vocabulary: Cellular Component
TermDefinition
GO:0000228nuclear chromosome
Vocabulary: INTERPRO
TermDefinition
IPR006939SNF5
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
biological_process GO:0043044 ATP-dependent chromatin remodeling
biological_process GO:0006281 DNA repair
biological_process GO:0006337 nucleosome disassembly
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0000228 nuclear chromosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g05440.1Cp4.1LG08g05440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006939SNF5/SMARCB1/INI1PANTHERPTHR10019SNF5coord: 1..240
score: 2.3E
IPR006939SNF5/SMARCB1/INI1PFAMPF04855SNF5coord: 99..240
score: 2.1E-18coord: 20..86
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g05440Cucsa.252100Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g05440CmaCh14G015520Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g05440CmaCh06G015930Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g05440CmoCh06G015880Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g05440CmoCh14G015880Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g05440Cla021836Watermelon (97103) v1cpewmB845
Cp4.1LG08g05440Csa3G171220Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g05440MELO3C006760Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g05440ClCG05G006940Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g05440CSPI03G15440Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g05440Lsi05G013780Bottle gourd (USVL1VR-Ls)cpelsiB715
Cp4.1LG08g05440MELO3C006760.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g05440CsaV3_3G015610Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g05440Bhi01G000832Wax gourdcpewgoB1110
Cp4.1LG08g05440CsGy3G015510Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g05440Carg25662Silver-seed gourdcarcpeB1043
Cp4.1LG08g05440Carg19590Silver-seed gourdcarcpeB0396
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g05440Cp4.1LG03g12080Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g05440Cucurbita maxima (Rimu)cmacpeB412
Cp4.1LG08g05440Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g05440Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g05440Watermelon (97103) v1cpewmB853
Cp4.1LG08g05440Melon (DHL92) v3.5.1cpemeB793