CmaCh06G015930 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G015930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Bushy growth protein
Location	Cma_Chr06 : 9933714 .. 9937585 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAGGCAAAGGGGCCAAGACGAGGGAAGCGCACTGCCGTCGTTCCGAAAGCTACATAACCAGAACGCTCGAAACACACACAACGGGAGAGTCGATCAACCATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGAATGTGAGTTCTTTTATCTCTTTCGACTTTAACATTGTTCGTTTCATTGATTCCTCTTTCTTATGGCTTTATATTTGGTTTAATGTTCCCAATCATTATCAAAGTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATAGAAATCGATGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTACTGGTAATTTCGTTTATTTATATCGCTCATGCCTGTTAATGTTTCCTTTCCAATCAATGATGTTTGATGTGTAGCGTAGTTTCAGCTCTTGACCGTTCGAATTTAGGGTTTTTTTGTCCCTAAATTTATGATTTCTGACTTGGAAGACTGAATTAATCCCTGTTTTACCGATGATATTGGCGTATTGTTGATTTTTTAATGAAAAACTTGCATACTTCATTTAGTTTTTATATACGAGTTTAATGTCTTCCATGAACTTTTAATTATGTACATAATAAATATATTAAATCTAAAAGATATTGAATAGGTCAAGAATTCAAAGTTCAAAGACTATTAGACACAAAATGGAAGTTTTGGGACATATTGTTAAATTTAGAGATCTATGTTAGACACAAGCTTGAACATTCAAGGGCTTGGCTTGTGATTTTAGCTAAAGTTTATGCGATATAAAATAGTATTTATGACTAAGATATATACTGTCCATCATTGATATTACTTGTTTTCTCATCATTCTTTTCTCTACAATGAGTATTATGGTTCTGAAAAGAACATCTAAATTCTTATGCAAATTCCGAAAAAAAAAAAAAAAACAAGTTTTTGAAAACTACATTTTTAGTTTTCAAAACTCCACTAGGTTTTTGAAAACATTGGTAAAATGTAGGTAACAAAACAAGAAATTCATAGAGGCTTAATTTTCAAAAATTAAAAACAAAAAACCAAATAGTTATCGAAAAGGGTCTAAGTTATTTAGTTTTTAACATGGGAACTTGAACCTAGGAATTCAGTGGTTATCTTAAAACATCCCAAAACCATAGGCACCCTTGAAGGTTAACTTGAAAATGTGTTTTTTGCTCTTGTGATAGTATCTCCAATTGCATGATTATATCTTATGTATACTCTAGATCCAGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAAGTAAGAACAATGGTTATCCGAACCTTCCTCTCCCATTCTTCAGGATTTGAATTGTCAGCCTAAACCATGTTCTTTTAGTAATAAGAACAATTTTTTTTTTTTAACTTACATGAATTTTGTAATTAAATATTGACATGCCATCAAATTTAATTATGTTTACTCTTGGCTTTTGCTTATTAGTCACAACTTACAGAGTTCAGATCCTTTGAAGGTCAAGACATGTATACTGGTGAAAAGATTATTACAATCAAGGTTTGTCTAATTGGCATTGCAATACCAATCTCTTGCAACCTCCTCCCTTTATCATTATCTTACAGCTAGATGCCAAATAATGCAATTCTTTCTCTTTTTCAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGTAAAGTTGAACATACTCTTGATACATTTGACTGGAAAAAATGTTTATTAAGCTTACTTGTGCAAACTGATATGTCTTTTAGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGAGTAAGCAAAAATCAATTGAATTTGAAAATATACAAAATAAATTTTTTTGTACATGTAAATTGGTTCCTTTGGTGATGAAAAGGCAGCATCTCACTTTGAAGGGATGGATTGTCAATGAGTTATTTTCACCTAAAGTCTCCTGTAATTGTTTGTTTTTCCAACTATTGGATACCATGAGAATTTCATTTATTTTTGTGAGGTAGCCTGCAATCGCTGTTGCAATACGAGAGCAGCTTTATGAGGTTTGTTTTTTCTTACCTGTTAAGCCTCCCTTTCGTAAGGACAATACTTTTTACAGTTCTGTTCACAATCTGAATGCTTTATTTCATCACTGCATCTTCATTGTGTCTATGTTCCAGCAGATAGCCGTGCAGAACGTTGTTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGGTATATTCATTCAAACTCGTGCGTTGTTCCTCATTCTCTTTTGTAATTGGGACTTGGAATGAAACTAAATATTCACCTTTACTCATTTGTCTTTTGCAATTGTGCTTCTTTATCTGTTTGGTGCAACAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGTGAGTATTATTTTATTAATTTTTTTGAGTAATTACTTTATTCCCTGTTACCATTTTCCTAATATCATACGTTTTATTCTAATTTTTTAGGTTGTAGTCTGTGTTTATTATTAATGTTCTTTCTTTCTAAAATGCATATCTTAAACTTATCTATTCTCAAGTTTTAATATAAAAAATATTCAAAATATAAGGTCACTTGACATGCACTCTTTCGAACAATCTATACAAGCTAATGCACTTGGAGCTTAGATCATTATTCTTTTGGCTGTCGTGGTTTTTATACCATTTTCATTTGTCAGGGTCGGTGAACTTCGTTTGGGAGTGATCTTTTTTTTTTTCTTTTTCTTTTCGTTTTTCTAAATTTAAAAATTAACTCATGCTGTTAGTGTATTTCTAATATTCGTTGCAGATAACTTGTAAAATTCTAAAAAATTGATGCTTATGGTAGTGTACACTAAAATGCAACAGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAATATGTTGCAAGTAGTTGAGAATATCACTCGTATCGTCATGAACAGTGTCGACTTTTCCAGTGGAGGTAAATTATTCAACCCAGATGAAGTTCGTAGGCAATTGTTCTTGCTATCTCAACACATACTTAGAGTTCTTTAACTTCCTAAGTTAAAAGCTTTCGAATCGATTCTTCATCGACTGTACGTAATCCTTGTCTAGCTCTTAAGCAGGGACATGAACTCTCTGATAAGTTCATATGGTAGATCTTTTGACAAGTTTTACTGTATTGGCATGGACTATATCTCACTAGAGAAGGGTAGACCTTCTGAAATGAGTTTTCATTCTATTTCTTGCCTTTGATTTCATAGTCAAAATCAGAACCATTCAAGAAGTGTTGAATGACTCATTAAGAAGGATTACTCTGTTCCATGTAGCTGATAAGTGAAAAGTTCATTTGATAGAATCATCTGTGGGCTTTTTCCACAATGCTCCATTTTCCTCTTTGGAAGTTGGGATATGGGTTGTGGCAGGCTTTGGTGATACCATTCCATAGCAGGGTCCAAGAGAAACTCTCTTAACTCTTAGATATGGTTGAAAATTTTATGATGACTCTCTGGGATGAATTTGGTTTCACCTCCACTTCATGTGTTTGCAAACTAGTTCGATAGAGGACTATTTAGAGATTTGGAGGTCAATGCGAGTGAGGTTGAAGTTGATTATGAGGTTGTCGTTAAAGTCAATTGAGTTCGGCA

mRNA sequence

AAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAGGCAAAGGGGCCAAGACGAGGGAAGCGCACTGCCGTCGTTCCGAAAGCTACATAACCAGAACGCTCGAAACACACACAACGGGAGAGTCGATCAACCATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGAATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATAGAAATCGATGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTACTGATCCAGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAGTTCAGATCCTTTGAAGGTCAAGACATGTATACTGGTGAAAAGATTATTACAATCAAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATCGCTGTTGCAATACGAGAGCAGCTTTATGAGATAGCCGTGCAGAACGTTGTTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAATATGTTGCAAGTAGTTGAGAATATCACTCGTATCGTCATGAACAGTGTCGACTTTTCCAGTGGAGGTAAATTATTCAACCCAGATGAAGTTCGTAGGCAATTGTTCTTGCTATCTCAACACATACTTAGAGTTCTTTAACTTCCTAAGTTAAAAGCTTTCGAATCGATTCTTCATCGACTGTACGTAATCCTTGTCTAGCTCTTAAGCAGGGACATGAACTCTCTGATAAGTTCATATGGTAGATCTTTTGACAAGTTTTACTGTATTGGCATGGACTATATCTCACTAGAGAAGGGTAGACCTTCTGAAATGAGTTTTCATTCTATTTCTTGCCTTTGATTTCATAGTCAAAATCAGAACCATTCAAGAAGTGTTGAATGACTCATTAAGAAGGATTACTCTGTTCCATGTAGCTGATAAGTGAAAAGTTCATTTGATAGAATCATCTGTGGGCTTTTTCCACAATGCTCCATTTTCCTCTTTGGAAGTTGGGATATGGGTTGTGGCAGGCTTTGGTGATACCATTCCATAGCAGGGTCCAAGAGAAACTCTCTTAACTCTTAGATATGGTTGAAAATTTTATGATGACTCTCTGGGATGAATTTGGTTTCACCTCCACTTCATGTGTTTGCAAACTAGTTCGATAGAGGACTATTTAGAGATTTGGAGGTCAATGCGAGTGAGGTTGAAGTTGATTATGAGGTTGTCGTTAAAGTCAATTGAGTTCGGCA

Coding sequence (CDS)

ATGAAATCTTCGGCCTCAGCTAACTCAAAATCTCCTTTCAAGTTCAGAATTCCGACGGCGGAGAATCTAGTGCCAATTCGCTTAGATATAGAAATCGATGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTACTGATCCAGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAGGATTTAAAGCTTCCCCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAGTTCAGATCCTTTGAAGGTCAAGACATGTATACTGGTGAAAAGATTATTACAATCAAGCTTGATCTTCGAGTAAACAATACGCTCATAAGGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTCTGCAAAGATTTGGGTATTGAAGACCCTGAAGTAGGACCTGCAATCGCTGTTGCAATACGAGAGCAGCTTTATGAGATAGCCGTGCAGAACGTTGTTTCAGCAAGAGAAAGCAGACTGAGCAAGAAGGGCCGCCGAGGGTTTGAGCATGTTTCAGCAAGTAAAACTGGAGGTGCTTCGGTGGACTTGATGAAGTTATTTGGTCATCGATCAAGTGCTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTTGATCTTCTATCCAACGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGGGCTGCTCGATAA

Protein sequence

MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRGFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR

Homology

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BLAST of CmaCh06G015930 vs. Swiss-Prot
Match: BSH_ARATH (Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BSH PE=1 SV=2)

HSP 1 Score: 385.2 bits (988), Expect = 5.3e-106
Identity = 188/240 (78.33%), Postives = 216/240 (90.00%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKRTV
Sbjct: 1   MKGLVSTGWKGPVKFRMPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+V SARESRLSKKGRRG
Sbjct: 121 NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            +H SASK  G S+DLMKLF  +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Sbjct: 181 SDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR 240

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BLAST of CmaCh06G015930 vs. Swiss-Prot
Match: SNF5_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus tropicalis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.9e-19
Identity = 56/139 (40.29%), Postives = 85/139 (61.15%), Query Frame = 1


Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQ 79
           +E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+
Sbjct: 176 SEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIR 235

Query: 80  SQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDL 139
            Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +L
Sbjct: 236 QQIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 295

Query: 140 GIEDPEVGPAIAVAIREQL 158
           G+   E    IA +IR QL
Sbjct: 296 GL-GGEFVTTIAYSIRGQL 312

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BLAST of CmaCh06G015930 vs. Swiss-Prot
Match: SNF5_DANRE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A OS=Danio rerio GN=smarcb1a PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 1


Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P  F+  IA +I+ 
Sbjct: 172 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLSPLTFVPAIASAIRQ 231

Query: 81  QLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLG 140
           Q+  + +    D    +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +LG
Sbjct: 232 QIESYPTDSILDEQMDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 291

Query: 141 IEDPEVGPAIAVAIREQL 158
           +   E    IA +IR QL
Sbjct: 292 L-GGEFVTTIAYSIRGQL 307

[Close]

BLAST of CmaCh06G015930 vs. Swiss-Prot
Match: SNF5_XENLA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Xenopus laevis GN=smarcb1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19
Identity = 56/138 (40.58%), Postives = 84/138 (60.87%), Query Frame = 1


Query: 21  ENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQS 80
           E LVPIRLD+EIDGQ+ +DAFTWN  +      +FA+    DL L P AF+  IA +I+ 
Sbjct: 177 EVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQ 236

Query: 81  QLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDLG 140
           Q+  + +    +  + +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +LG
Sbjct: 237 QIESYPTDSILEDQSDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELG 296

Query: 141 IEDPEVGPAIAVAIREQL 158
           +   E    IA +IR QL
Sbjct: 297 L-GGEFVTTIAYSIRGQL 312

[Close]

BLAST of CmaCh06G015930 vs. Swiss-Prot
Match: SNF5_TETFL (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 OS=Tetraodon fluviatilis GN=smarcb1 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 55/139 (39.57%), Postives = 84/139 (60.43%), Query Frame = 1


Query: 20  AENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQ 79
           +E LVPIRLD+EI+GQ+ +DAFTWN  +      +FA+    DL L P AF+  I  +I+
Sbjct: 171 SEVLVPIRLDMEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIPSAIR 230

Query: 80  SQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNYESDPEEFSRTFCKDL 139
            Q+  + +    +  T +++I IKL++ V N  + DQF WD++  E+ PE+F+   C +L
Sbjct: 231 QQIESYPTDAILEEQTDQRVI-IKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSEL 290

Query: 140 GIEDPEVGPAIAVAIREQL 158
           G +  E    IA +IR QL
Sbjct: 291 G-QGGEFVTTIAYSIRGQL 307

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BLAST of CmaCh06G015930 vs. TrEMBL
Match: A0A0A0L868_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.3e-122
Identity = 224/240 (93.33%), Postives = 232/240 (96.67%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNV SARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of CmaCh06G015930 vs. TrEMBL
Match: D7T6B3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.6e-109
Identity = 195/240 (81.25%), Postives = 222/240 (92.50%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +SK+P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NN+ESDPEEF+RTFCKDLG+EDPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            EH+ ASK  G ++DLMKLFG++SS +RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

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BLAST of CmaCh06G015930 vs. TrEMBL
Match: A0A068UT17_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.8e-108
Identity = 191/237 (80.59%), Postives = 222/237 (93.67%), Query Frame = 1


Query: 4   SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDL 63
           S   +S++P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNP+DPDSEVVVFAKRTVKDL
Sbjct: 5   STWGSSRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDL 64

Query: 64  KLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNY 123
           KLPPAFITQIAQSIQSQLTEFRS+EGQDMYTGE+++ IKLDLRVN+TLI+DQFLWDLNN+
Sbjct: 65  KLPPAFITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNF 124

Query: 124 ESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRGFEH 183
           ESDPEEF+RTFCKD+GIEDPEVGPAIA+AIREQLYEIAVQ+V SA+ESR+ KKGR+GFEH
Sbjct: 125 ESDPEEFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEH 184

Query: 184 VSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 241
           +  SK GG +VDL+K FG++SS +RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 185 IPISKAGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

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BLAST of CmaCh06G015930 vs. TrEMBL
Match: A0A022R7Z0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012763mg PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 1.5e-107
Identity = 194/241 (80.50%), Postives = 220/241 (91.29%), Query Frame = 1


Query: 1   MKS-SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRT 60
           MKS S    +K+P KFRIPTAENLVPIRLDIEIDGQRF+DAFTWNP+DPDSEV +FAKRT
Sbjct: 1   MKSHSPWGTAKNPVKFRIPTAENLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVALFAKRT 60

Query: 61  VKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD 120
            KD KLPPAFITQIAQSIQ+QLT+FRS+EGQDMYTGEKI+ IKLDLRVN+TLI+D FLWD
Sbjct: 61  AKDSKLPPAFITQIAQSIQTQLTDFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDNFLWD 120

Query: 121 LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRR 180
           LNN+ESDPEEF++TFCKD+GI DPEVGPAIA++IREQLYEIAVQNV SARESR++KKGRR
Sbjct: 121 LNNFESDPEEFAKTFCKDMGIVDPEVGPAIAISIREQLYEIAVQNVTSARESRMNKKGRR 180

Query: 181 GFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAA 240
           G EH+ ASK  G +VDL KLFG++SS VRKRK+WD+YEPIVDLLSNEEVDALEAKEER A
Sbjct: 181 GLEHIQASKNAGNAVDLFKLFGNKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERMA 240

[Close]

BLAST of CmaCh06G015930 vs. TrEMBL
Match: A0A067JYY0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19103 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.3e-107
Identity = 191/240 (79.58%), Postives = 219/240 (91.25%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +S++P KFR+PTAENLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRT 
Sbjct: 1   MKGLPSTSSRAPVKFRMPTAENLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTA 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAF+ QIAQSIQ+QLTEFRS+EGQDMYTGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFVMQIAQSIQTQLTEFRSYEGQDMYTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NN++SDPE+F+RTFCKDL IEDPEVGPA+A AIREQLYEIA+Q+V +ARESRLSKKGRRG
Sbjct: 121 NNFDSDPEDFARTFCKDLDIEDPEVGPAVAFAIREQLYEIAIQSVATARESRLSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            E++ A K GG +VDLMKLF ++ S +RKRK+WD+YEPIVDLLSNEEVDALEA+EER AR
Sbjct: 181 AEYIPAIKAGGTAVDLMKLFSNKYSVIRKRKEWDVYEPIVDLLSNEEVDALEAREERNAR 240

[Close]

BLAST of CmaCh06G015930 vs. TAIR10
Match: AT3G17590.2 (AT3G17590.2 transcription regulatory protein SNF5, putative (BSH))

HSP 1 Score: 381.3 bits (978), Expect = 4.3e-106
Identity = 189/242 (78.10%), Postives = 216/242 (89.26%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKR 60
           MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNP+DPD+EVV+FAKR
Sbjct: 1   MKGLVSTGWKGPVKFRIYRPTAENLVPIRLDIQFEGQRYKDAFTWNPSDPDNEVVIFAKR 60

Query: 61  TVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLW 120
           TVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKII IKLDLRVN+TLI+DQFLW
Sbjct: 61  TVKDLKLPYAFVTQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLW 120

Query: 121 DLNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGR 180
           DLNN+ESDPEEF+RT CKDLG+EDPEVGPA+A AIREQLYEIA+Q+V SARESRLSKKGR
Sbjct: 121 DLNNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIAIQSVASARESRLSKKGR 180

Query: 181 RGFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERA 240
           RG +H SASK  G S+DLMKLF  +SS VRKRKD D+YEP+VDLL++EEVDALEA+EER 
Sbjct: 181 RGSDHGSASKASGLSMDLMKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERH 240

[Close]

BLAST of CmaCh06G015930 vs. NCBI nr
Match: gi|449459804|ref|XP_004147636.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis sativus])

HSP 1 Score: 447.2 bits (1149), Expect = 1.8e-122
Identity = 224/240 (93.33%), Postives = 232/240 (96.67%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNTLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNV SARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR 240

[Close]

BLAST of CmaCh06G015930 vs. NCBI nr
Match: gi|659077056|ref|XP_008439008.1| (PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo])

HSP 1 Score: 446.0 bits (1146), Expect = 4.0e-122
Identity = 223/240 (92.92%), Postives = 232/240 (96.67%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII IKLDLRVNNT+I+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLDLRVNNTIIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NNYESDPEEFSRT CKDLGI+DPEVGPAIAVAIREQLYEIAVQNV SARESR+SKKGRRG
Sbjct: 121 NNYESDPEEFSRTLCKDLGIDDPEVGPAIAVAIREQLYEIAVQNVASARESRMSKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
           FEHV  SKTGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Sbjct: 181 FEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERIAR 240

[Close]

BLAST of CmaCh06G015930 vs. NCBI nr
Match: gi|225432226|ref|XP_002270283.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera])

HSP 1 Score: 403.7 bits (1036), Expect = 2.3e-109
Identity = 195/240 (81.25%), Postives = 222/240 (92.50%), Query Frame = 1


Query: 1   MKSSASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTV 60
           MK   S +SK+P KFR+PTA+NLVPIRLDIEIDG RFKDAFTWNP+DPDSEVVVFAKRTV
Sbjct: 1   MKPLPSTSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 61  KDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDL 120
           KDLKLPPAFITQIAQSIQSQL EFRSFEGQDM TGEKI+ IKLDLRVN+TLI+DQFLWDL
Sbjct: 61  KDLKLPPAFITQIAQSIQSQLAEFRSFEGQDMQTGEKIVPIKLDLRVNHTLIKDQFLWDL 120

Query: 121 NNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRG 180
           NN+ESDPEEF+RTFCKDLG+EDPEVGPAIAVAIREQLYEIA+Q+V SARE+R+SKKGRRG
Sbjct: 121 NNFESDPEEFARTFCKDLGVEDPEVGPAIAVAIREQLYEIAIQSVTSARETRISKKGRRG 180

Query: 181 FEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 240
            EH+ ASK  G ++DLMKLFG++SS +RKR++WD+YEPIVD+LSNEEVD LEA+E+R AR
Sbjct: 181 AEHIPASKASGTALDLMKLFGNKSSIIRKRREWDVYEPIVDILSNEEVDVLEAREDRNAR 240

[Close]

BLAST of CmaCh06G015930 vs. NCBI nr
Match: gi|661884808|emb|CDP11571.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 400.2 bits (1027), Expect = 2.5e-108
Identity = 191/237 (80.59%), Postives = 222/237 (93.67%), Query Frame = 1


Query: 4   SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRTVKDL 63
           S   +S++P KFRIPT++NL+PIRLDIEIDGQRF+DAFTWNP+DPDSEVVVFAKRTVKDL
Sbjct: 5   STWGSSRNPVKFRIPTSDNLLPIRLDIEIDGQRFRDAFTWNPSDPDSEVVVFAKRTVKDL 64

Query: 64  KLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWDLNNY 123
           KLPPAFITQIAQSIQSQLTEFRS+EGQDMYTGE+++ IKLDLRVN+TLI+DQFLWDLNN+
Sbjct: 65  KLPPAFITQIAQSIQSQLTEFRSYEGQDMYTGERVVPIKLDLRVNHTLIKDQFLWDLNNF 124

Query: 124 ESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRRGFEH 183
           ESDPEEF+RTFCKD+GIEDPEVGPAIA+AIREQLYEIAVQ+V SA+ESR+ KKGR+GFEH
Sbjct: 125 ESDPEEFARTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQSVASAKESRMIKKGRKGFEH 184

Query: 184 VSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAAR 241
           +  SK GG +VDL+K FG++SS +RKRK+WD++EPIVDLLSNEEVDALEA EER AR
Sbjct: 185 IPISKAGGIAVDLVKSFGNKSSVIRKRKEWDVFEPIVDLLSNEEVDALEATEERNAR 241

[Close]

BLAST of CmaCh06G015930 vs. NCBI nr
Match: gi|747080793|ref|XP_011087659.1| (PREDICTED: chromatin structure-remodeling complex protein BSH [Sesamum indicum])

HSP 1 Score: 398.3 bits (1022), Expect = 9.6e-108
Identity = 193/241 (80.08%), Postives = 221/241 (91.70%), Query Frame = 1


Query: 1   MKS-SASANSKSPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPTDPDSEVVVFAKRT 60
           MKS S    +K+P KFRIPTA+NLVPIRLDIEIDGQR +DAF WNP+DPDSE+VVFAKRT
Sbjct: 1   MKSHSPWGTAKNPVKFRIPTADNLVPIRLDIEIDGQRCRDAFIWNPSDPDSEIVVFAKRT 60

Query: 61  VKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIITIKLDLRVNNTLIRDQFLWD 120
           VKDLKLPPAF+TQIAQSIQ+QL+EFRS+EGQDMYTGEK++ IKLD+RVN+TLI+D FLWD
Sbjct: 61  VKDLKLPPAFVTQIAQSIQTQLSEFRSYEGQDMYTGEKVVPIKLDIRVNHTLIKDHFLWD 120

Query: 121 LNNYESDPEEFSRTFCKDLGIEDPEVGPAIAVAIREQLYEIAVQNVVSARESRLSKKGRR 180
           LNN+ESDPEEF++TFCKD+GIEDPEVGPAIA+AIREQLYEIAVQNV S RESR++KKGRR
Sbjct: 121 LNNFESDPEEFAKTFCKDMGIEDPEVGPAIAIAIREQLYEIAVQNVTSIRESRINKKGRR 180

Query: 181 GFEHVSASKTGGASVDLMKLFGHRSSAVRKRKDWDIYEPIVDLLSNEEVDALEAKEERAA 240
           GFEH+ ASK  G +VDL KLFG++SS VRKRK+WD+YEPIVDLLSNEEVDALEAKEER  
Sbjct: 181 GFEHIQASKASGNAVDLFKLFGNKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNT 240

The following BLAST results are available for this feature:

BLAST of CmaCh06G015930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BSH_ARATH	5.3e-106	78.33	Chromatin structure-remodeling complex protein BSH OS=Arabidopsis thaliana GN=BS...	[more]
SNF5_XENTR	2.9e-19	40.29	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_DANRE	3.8e-19	40.58	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_XENLA	3.8e-19	40.58	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]
SNF5_TETFL	1.1e-18	39.57	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of CmaCh06G015930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L868_CUCSA	1.3e-122	93.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171220 PE=4 SV=1	[more]
D7T6B3_VITVI	1.6e-109	81.25	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01060 PE=4 SV=...	[more]
A0A068UT17_COFCA	1.8e-108	80.59	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033899001 PE=4 SV=1	[more]
A0A022R7Z0_ERYGU	1.5e-107	80.50	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012763mg PE=4 SV=1	[more]
A0A067JYY0_JATCU	4.3e-107	79.58	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19103 PE=4 SV=1	[more]

BLAST of CmaCh06G015930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17590.2	4.3e-106	78.10	transcription regulatory protein SNF5, putative (BSH)	[more]

BLAST of CmaCh06G015930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459804\|ref\|XP_004147636.1\|	1.8e-122	93.33	PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi...	[more]
gi\|659077056\|ref\|XP_008439008.1\|	4.0e-122	92.92	PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumi...	[more]
gi\|225432226\|ref\|XP_002270283.1\|	2.3e-109	81.25	PREDICTED: chromatin structure-remodeling complex protein BSH [Vitis vinifera]	[more]
gi\|661884808\|emb\|CDP11571.1\|	2.5e-108	80.59	unnamed protein product [Coffea canephora]	[more]
gi\|747080793\|ref\|XP_011087659.1\|	9.6e-108	80.08	PREDICTED: chromatin structure-remodeling complex protein BSH [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006939	SNF5

Vocabulary: **Cellular Component**
Term	Definition
GO:0000228	nuclear chromosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006338	chromatin remodeling

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0043044	ATP-dependent chromatin remodeling
biological_process	GO:0006281	DNA repair
biological_process	GO:0006337	nucleosome disassembly
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0000228	nuclear chromosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015930.1	CmaCh06G015930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006939	SNF5/SMARCB1/INI1	PANTHER	PTHR10019	SNF5	coord: 1..240 score: 2.7E
IPR006939	SNF5/SMARCB1/INI1	PFAM	PF04855	SNF5	coord: 20..86 score: 1.9E-18coord: 99..240 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G015930	Cucsa.252100	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G015930	Cla021836	Watermelon (97103) v1	cmawmB798
CmaCh06G015930	Csa3G171220	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G015930	MELO3C006760	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G015930	ClCG05G006940	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G015930	CSPI03G15440	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G015930	CmoCh06G015880	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G015930	CmoCh14G015880	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G015930	Lsi05G013780	Bottle gourd (USVL1VR-Ls)	cmalsiB765
CmaCh06G015930	Cp4.1LG03g12080	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G015930	Cp4.1LG08g05440	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G015930	MELO3C006760.2	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G015930	CsaV3_3G015610	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G015930	Cla97C05G088590	Watermelon (97103) v2	cmawmbB856
CmaCh06G015930	Bhi01G000832	Wax gourd	cmawgoB1006
CmaCh06G015930	CsGy3G015510	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G015930	Carg25662	Silver-seed gourd	carcmaB1036
CmaCh06G015930	Carg19590	Silver-seed gourd	carcmaB0393

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G015930	CmaCh14G015520	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:

None