Cucsa.238510 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.238510
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	RING-finger ubiquitin ligase
Location	scaffold02023 : 1067140 .. 1072041 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGGCAGCAGCGAGCGAGAGAGTCGAAGAAGAAAGAAATCTCGATATTGAGAGAGGGGGAAGTTTTATTCTTGTTGAATTCATAGCTTTCAATTCATCGCCTTCAATTCGCCAACGCAAAATTCCCCTCCTTAAAATGCGCAATCTCGATTTAGCTTGGAATCCCAATTCTCTGTGTACGTGATTTTTACCAAAAAGGCGCATGTATATAATTTCCACATATTCTTATTTCTCCCAATTCCGGACTTCCAGGTTTCTCTCTCCTTCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCTTCTCCCTCCACTTTACTCTTCTCTCAAGGTACTTCCCTCTTTCCAACTATTCTCTATGTTCCTGTGGACCCCCTTTCGATGATCGCCCCATTTTTTtGTTCTTTATTGGGTTTCTGATTCTTTTCATGATTTATGCGTATTTCTTGTCCGATCGTCTTTTTGTTGAGTTTTTTCTCATGGGGTTGTCGTATAATTTGAATAGTTTGTTTTGTTTTTATTGTTCTGTATGGTTGTATTCCTTATTCTTCAATGGGTACATTGGATGAGTCGTGTATGTTCTCGACGATGATGATCAGCTTGGTTTGGTATTCATGTTTTGATGGTATCTCGTTCCCTCATCATTTAAGGAAaGAATCCTTGTTTTCAGAGGTGACCCAGAAAAaGAAAAGGTCAATTTGGTGAGATGGATGGGTTATTTTGACCAAAGACTGGCATTTGATTAATTTTTtGCTGTTTCAATAATTTTTtCTTTCATTGTTGTGATTCTTGTGGTTTTGGATTGCTGCCGACAAATTATTGTACCTTTAAATAATAGTGGTTGTTGGCTTAATATATGATTTAGTAAGAACTGTCATTTGACTTGTGTTCTAGGTGATGACATTAGCATTCATCACAGTTGGTCTGAGGATAATTCCTTCGGATCCTCATTTCATTAACCTTACTGAATAGAGGCTGCTAATTTTACAGGTGAAAATCACTGTTTAAAAGATCCAGTTTATTCAACTTGAAGAGGGAGGGTACTGGTTCGTGGAGGCAATAGTACTTCTGCGAGCTTATGTCCTCTCGTCTTCGTTTTCCTTCAGAATCACTGGCCGAGATCTTTCCATTTGAATGCAATTGAACATCTAAATTGGTGTATCTGTTGACTTAGGAATCTGCTGGGTTGGTAATCGAGAACAATAAAAAGATTAAGTTTGGCACAATGGGTGCTGTCTGCTGTTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTCTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAAAGCTTCTTAAATGCTGTAAGCTCTATTTTCGTTGCAATCATGTTATTTTTCCATATGTCACTATCAAGGAGGAAAGTAGAAGTATTTATGAATACATACATTGGTGAAAATTCAAAGAAAAAAATTGAAAGGTAGAAACAAAAGATATTTTGAGTACTATACTCTCATACTTTGTCATCACAAAGTTGAAGAAAAAAAAaTTCTATTATTGGTTTTACTTTACGAGGATTTGACATTTACATAGTATTAGAGTTTACAGTTAAGAAAaTTTATTTTtCATGAAAAATTGATGATAAAAAATTTGCAATTACAGATATTAAGAGGGAAATGTCTTGAATCTTAATGCTACTTGTATATATCATATTATTCGGCTGTTTGTTTTAATTTGTCTTTCCATGTTTTCTAGCGATATTTTTTTTTTtGCTTTTATAGTGCACATTAGCATGGGTTAATATATATATAACCTGCTATTGATTGTAATACATTTATGGAAAAACATGTGTAATTTGTTTCAAACGTTAGAAGCGTTTAGCTGTAGTTTGTGACTTTATTTTCAAGATATCTATATTAATCTATTTTTCCACTTACTTCCTCTAGTACACATTGATTTTTCGAAGAGGAGAAGTACATTCTGTCTCCTCATCAATTCAAGGGGCAACATCTATGAATTCTACAGCTTCAACGGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGAAGTTGATACAGATTCAGATTCTTTGGGCTCAGGAGGCAAACGGAATGGGTCTGCTTGTCTTGAGGAATCTAAAGAAAATCTTGGCAAATCGTCTCTAAAGTTCCCTTCAACTAAATCTACCTCTGGACTTGGATATGCATATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGGTTGATTTATTTATTTAGCTTCATTTTGTCAAGGACTTTTGTTTCTTTCTTATAATGATATTTGGTTCTGGTTTGGCCTTGATATTCTTGTTTGTTGAGCTTCTGGGTGACAAATAAGTCACTGCTCGGCAACATTTTTTGACATGCCAGATTTTCATTTTGCTTATTTAATGTCTTTTCCCTGGCAGAATATACTTCGGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTATGGTTCCTTTCCTCAATTGTATCATGTCAGCTTTATTCAATCACTATATTAGAGCGACCCTATTGGTTGTGTTCTAGCCTAACTACCCATGAAGAGCACCTCTAAAAGAGTCTAGAATCATCGCAGTTCTTTTGGAATAACATAGATGGTTTAGCACGATCCATTTATATGTCTGGAGCTGTTAGATTAAGTTATTATGTTAAAACTTCTCGTATCCTAAAATTTCTAAAATATCATAATTTTAAGAGTACACATCATCCCTCCTTAGAATGAGGTGAATCCGATCTCATTTTTTGTTTTGATTGAAAACCTGATATTGAGGGCTTCTCCCACCGGGGAAGGACTTATCTGTCTGAAGGTTAAAACGTGTGACCTCTGGGTAGGTGATGTCAAGAGACTGGTTTGCCTTTGCCAACGAGGTGCCCTTTGGGGGATAGTTGATCACATTTTGATATCAATACTTATGCATTTTAAAATCAGATGACACAGTTTATGTGACAATATTTGAAGTTTTATATAATTAAACGAATAAATGATGTAGCACCGCACCATTTTGTGATATTCAATTGGTATGGTAGTGCATTGGTAATTTTGGGTATAATATACTAATGTTCCTTCCCCATCTCCTTCACCGGTGAATCTTTGAGAAATGACCTTCAGATGAAACATGATCCTTAGATGCTCTTCTACACTTATCTTGGTATAAAGTCATTTTTtCTTGATCGTATTCTAGTGATTCCAAATCAAATTAGAGGTGGAATTAGCTTTTAAGTTTTtCGGTTAACTAAAATAGTACCAGCATTAAATCTTGATTGCATGTACAACTGGTAGTTTTACTCAACAAGGAGAAGGGGCTTTGGCTGTGATTAAATTTGGTGCAGAGAGAATAATCTTCTGTAAATTAACAACCGTTTATTTACTTATGATCCATGCAATATCAAACTTATGACGGTCGCTTGGCTATGATATTTGACAGTTATAAAACTTGTGGAATGTTGAATACCATGAACAGGTTTAACAATGTCTTTTTTAAAAATGTTTTACAGTGTAGAGATAGTTCTTACTGTGAATATGATTTTCAACTGAATCTGAACTGATTTGTAAAATGTGGACAGACTTTAATTAGGATGAAAAATCATTGTCTAAAAAACCCTCATCAGTTGTTTATTGGGGTTCTTTGTCCTCAAACGGGTCTGTCATAATCTTTGAAACTTATTTTTTTTtGGCATGCGGAGATGTATTTTTCTTTTCTGATATAGATTTATATCTACATATTAGTTATTCGTTTGGTATTCTTTTTCACAATTACTAAGATGTATTGAATAATACTCAGCTGTTTGTTGAGGATAAATTGGGTTTTATTCAATTGTTTTTGCATGAGTTTTGTCATTGTTTACGTCTCAATTCTTTTTTTACAACGGGAACAAAATCAAAAGTTGAACTAAATGATTAGTTTATGGAGAAACTTCTTTTTACTTGTCACAACAACCTATGGTTAGAAAAACCATAGTCGCCTCTTTGAGTTCCAAGAGCCATTAATATAATGATCACCCACGGGTTTAGAGGATGAAAATCTTCGGCCCCTTAACACTGAGGAATTCTGAACCTCTCCAGCCTAGGCAGGCTTATGTTGGCCCCTAACACTTAAAGATAAAGGTTAGAGGTTAATCAATCTTCAAAAAATTGGTGTTTAGGCCTTATTGGCTAACCTGCAGCCAAAATAATTGTTAATTTGATTTGTTTGTTAAACAAAAAGTTCAGATCCTAAAATCCCCCAAGGAATTCTGAGTCTGAGTTCTGATGATGAGCTTGATTCACAATATTTGATTATGTAATTTGTAAACTGGAAAGGAAAAAGACTAACATGTTTGGATGGGTTTCATTTACTTTTATTTCATACCACTGTTTTAATGTCTTAGGCAATGGCATTCGATGAAACGACTTGATGTGCGTGTCGCGGACGAAGCCAGCAGCAGCACCTTGGGCATAACCACCAACAGAAACAGGGTCATTTGTGAATATTGCAGGATAAGATTTTTCAACCATAGTAAATATTATGAATGAAAGTATAACCAAGGTTGGATCCATCTGTTTCCTCTCTCTCTCTCtATTTtCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAAACTGATGTTTCACCAAAATATCATCTTATAGGGGAAGAAAAATAGGTGTTGTGAATGATTGAGAAACCTTTCCATTCCATGTTTGG

mRNA sequence

ACCGGCAGCAGCGAGCGAGAGAGTCGAAGAAGAAAGAAATCTCGATATTGAGAGAGGGGGAAGTTTTATTCTTGTTGAATTCATAGCTTTCAATTCATCGCCTTCAATTCGCCAACGCAAAATTCCCCTCCTTAAAATGCGCAATCTCGATTTAGCTTGGAATCCCAATTCTCTGTGTACGTGATTTTTACCAAAAAGGCGCATGTATATAATTTCCACATATTCTTATTTCTCCCAATTCCGGACTTCCAGGTTTCTCTCTCCTTCACCCACCACCGAAGATCGTAttctctttcggtcttctcttctcttctccctccactttactcttctctCAAGGTGAAAATCACTGTTTAAAAGATCCAGTTTATTCAACTTGAAGAGGGAGGGTACTGGTTCGTGGAGGCAATAGTACTTCTGCGAGCTTATGTCCTCTCGTCTTCGTTTTCCTTCAGAATCACTGGCCGAGATCTTTCCATTTGAATGCAATTGAACATCTAAATTGGTGTATCTGTTGACTTAGGAATCTGCTGGGTTGGTAATCGAGAACAATAAAAAGATTAAGTTTGGCACAATGGGTGCTGTCTGCTGTTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTCTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAAAGCTTCTTAAATGCTTACACATTGATTTTTCGAAGAGGAGAAGTACATTCTGTCTCCTCATCAATTCAAGGGGCAACATCTATGAATTCTACAGCTTCAACGGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGAAGTTGATACAGATTCAGATTCTTTGGGCTCAGGAGGCAAACGGAATGGGTCTGCTTGTCTTGAGGAATCTAAAGAAAATCTTGGCAAATCGTCTCTAAAGTTCCCTTCAACTAAATCTACCTCTGGACTTGGATATGCATATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCGGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGCAATGGCATTCGATGAAACGACTTGATGTGCGTGTCGCGGACGAAGCCAGCAGCAGCACCTTGGGCATAACCACCAACAGAAACAGGGTCATTTGTGAATATTGCAGGATAAGATTTTTCAACCATAGTAAATATTATGAATGAAAGTATAACCAAGGTTGGATCCATCTGTTTCCTCTCTCTCTCTCTATTTTCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAAACTGATGTTTCACCAAAATATCATCTTATAGGGGAAGAAAAATAGGTGTTGTGAATGATTGAGAAACCTTTCCATTCCATGTTTGG

Coding sequence (CDS)

ATGGGTGCTGTCTGCTGTTGTTTGAGCGTGGAGGATTTTGAAGACTATGTTAATCCTAATAGTTCAGTCTATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAAAGCTTCTTAAATGCTTACACATTGATTTTTCGAAGAGGAGAAGTACATTCTGTCTCCTCATCAATTCAAGGGGCAACATCTATGAATTCTACAGCTTCAACGGATAACTCTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATACATCCGCTTGCAGCGGGATGGGTTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACATGAAGAGTCAGAACCTTTAAGAAGTGAAGTTGATACAGATTCAGATTCTTTGGGCTCAGGAGGCAAACGGAATGGGTCTGCTTGTCTTGAGGAATCTAAAGAAAATCTTGGCAAATCGTCTCTAAAGTTCCCTTCAACTAAATCTACCTCTGGACTTGGATATGCATATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCGGAGAATCCCAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGCAATGGCATTCGATGAAACGACTTGA

Protein sequence

MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGATSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT*

Homology

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BLAST of Cucsa.238510 vs. Swiss-Prot
Match: RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.2e-76
Identity = 144/234 (61.54%), Postives = 170/234 (72.65%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            S+ S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSGGKR--NGSACL--EESKENL-GKSSLKFPSTKSTSGLGYA---YTSSE 180
           + D DS+S G GG +  N  + L  ++SKE    KSSL+   ++S S +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDET 227
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK M F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

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BLAST of Cucsa.238510 vs. Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 51/145 (35.17%), Postives = 65/145 (44.83%), Query Frame = 1


Query: 81  PRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEVDTDSDSLGSGGKRNGSAC 140
           P PLPYD      +      I  R  GSS   E         ++D  +L S      S  
Sbjct: 63  PAPLPYDLLLGRPQCTDSESIKGRMSGSSF--ETLATCEDLGESDCKTLAS------SVI 122

Query: 141 LEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFH 200
           L   K +  K              G      E+ED CP C E+Y  ENP++ TKC H FH
Sbjct: 123 LSPRKSDFSKHQ------------GLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFH 182

Query: 201 LGCIYEWMERSDNCPVCGKAMAFDE 226
           L C+ EW+ERSD CP+C K + FD+
Sbjct: 183 LSCLLEWIERSDRCPICDKEVVFDD 187

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BLAST of Cucsa.238510 vs. Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.8e-10
Identity = 30/76 (39.47%), Postives = 41/76 (53.95%), Query Frame = 1


Query: 147 NLGKSSLKFPSTKSTSGLGYAYTSSEDED-----VCPTCLEEYTSENPKIVTKCSHHFHL 206
           NL  +S   P+  S+S    A   + D+D      C  CLE +T ++P  VT C H +HL
Sbjct: 11  NLSDNSPFNPAIGSSSSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHL 70

Query: 207 GCIYEWMERSDNCPVC 218
            CI EW +RS  CP+C
Sbjct: 71  QCIIEWSQRSKECPIC 86

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BLAST of Cucsa.238510 vs. Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.7e-09
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 1


Query: 174 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           +D C  CLE +   +P  +T C H +HL CI EW +RS  CP+C ++++  + T
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPT 83

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BLAST of Cucsa.238510 vs. Swiss-Prot
Match: PHRF1_HUMAN (PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 40/152 (26.32%), Postives = 65/152 (42.76%), Query Frame = 1


Query: 70  DNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEVDTDSDSL 129
           D+SL E+    P P   D  P+       G       GSS    +         TD +  
Sbjct: 3   DDSLDELVARSPGP---DGHPQVGPADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDE 62

Query: 130 GSGGK-----RNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTCLEEY 189
           G+  +     R+GS    E  E+ G++ L+   T+       ++ S +D + CP CL  +
Sbjct: 63  GASEEEDLEDRSGS----EDSEDDGETLLEVAGTQGKLEAAGSFNSDDDAESCPICLNAF 122

Query: 190 TSENPKIVTKCSHHFHLGCIYEWMERSDNCPV 217
             +       C+H+F L CI EW + +++CPV
Sbjct: 123 RDQAVGTPENCAHYFCLDCIVEWSKNANSCPV 147

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BLAST of Cucsa.238510 vs. TrEMBL
Match: A0A0A0KSH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 9.1e-131
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

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BLAST of Cucsa.238510 vs. TrEMBL
Match: A0A067JND7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25599 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.6e-103
Identity = 178/227 (78.41%), Postives = 196/227 (86.34%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCCL  EDFEDY+NPNSS YRNC CLSCF+Q+FL+ Y+ +FRRGEVHSV SSIQGA
Sbjct: 1   MGSVCCCLHAEDFEDYMNPNSSAYRNCMCLSCFLQNFLHLYSSLFRRGEVHSVPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SM S++S DNSLS+MYRSPPRPLPYDADPRY RLQRDGL+SRREKGSSH HEESEPLRS
Sbjct: 61  ASMTSSSSLDNSLSDMYRSPPRPLPYDADPRYFRLQRDGLVSRREKGSSHAHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D DSDSL +G K   SAC E SKE   +SSLK  S K+T G+GY Y+SSEDEDVCPTC
Sbjct: 121 DNDGDSDSLSTGDKWTASACEEGSKEQRARSSLKLSSAKATVGIGYIYSSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERSD+CPVCGKAM FDETT
Sbjct: 181 LEEYTPENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKAMVFDETT 227

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BLAST of Cucsa.238510 vs. TrEMBL
Match: M5WZ55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011007mg PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.3e-102
Identity = 175/227 (77.09%), Postives = 197/227 (86.78%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCCL+ EDFEDYVNPNSS YRNC CLSCFI++FLN YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNAEDFEDYVNPNSSAYRNCICLSCFIENFLNVYTSLFRRGEVHSIPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SM S+AS DNS+S+MYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSH HEE+EPLRS
Sbjct: 61  ASMTSSASLDNSISDMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D DS+ L +G K NGSAC +  KE+  KSS+KF S K+T+ +G  Y SSEDEDVCPTC
Sbjct: 121 DTDADSECLSTGEKWNGSACEDGVKEHRSKSSMKFSSAKATTIVGNFYISSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGK M FDETT
Sbjct: 181 LEEYTPENPKIMTKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

[Close]

BLAST of Cucsa.238510 vs. TrEMBL
Match: A0A067GAA8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040167mg PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 8.3e-100
Identity = 172/227 (75.77%), Postives = 189/227 (83.26%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCC  VEDFEDY+NPNSSVYRNC CLSCFIQ  LN YT +FRRG+VHSV SSIQGA
Sbjct: 1   MGSVCCCFHVEDFEDYMNPNSSVYRNCMCLSCFIQHVLNVYTSLFRRGDVHSVPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SM STAS DNSLS+MYRSPPRPLPYDADPRY RLQ +GL+SRREKGSS  HEESEPLRS
Sbjct: 61  ASMTSTASLDNSLSDMYRSPPRPLPYDADPRYFRLQHEGLVSRREKGSSQFHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D +S+S  +G K N S+C + SKE   KSS+   S KST+G  Y Y+ SEDEDVCPTC
Sbjct: 121 DNDVESESFSAGDKWNDSSCEDGSKEQRSKSSVTLSSAKSTAGFAYIYSPSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERS+NCPVCGK M FDETT
Sbjct: 181 LEEYTPENPKIVTKCSHHFHLGCIYEWMERSENCPVCGKVMVFDETT 227

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BLAST of Cucsa.238510 vs. TrEMBL
Match: V4T3V4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012668mg PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-99
Identity = 171/227 (75.33%), Postives = 189/227 (83.26%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCC  VEDFEDY+NPNSSVYRNC CLSCFIQ  LN YT +FRRG+VHSV SS+QGA
Sbjct: 1   MGSVCCCFHVEDFEDYMNPNSSVYRNCMCLSCFIQHVLNVYTSLFRRGDVHSVPSSVQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SM STAS DNSLS+MYRSPPRPLPYDADPRY RLQ +GL+SRREKGSS  HEESEPLRS
Sbjct: 61  ASMTSTASLDNSLSDMYRSPPRPLPYDADPRYFRLQHEGLVSRREKGSSQFHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D +S+S  +G K N S+C + SKE   KSS+   S KST+G  Y Y+ SEDEDVCPTC
Sbjct: 121 DNDVESESFSAGDKWNDSSCEDGSKEQRSKSSVTLSSAKSTAGFAYIYSPSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERS+NCPVCGK M FDETT
Sbjct: 181 LEEYTPENPKIVTKCSHHFHLGCIYEWMERSENCPVCGKVMVFDETT 227

[Close]

BLAST of Cucsa.238510 vs. TAIR10
Match: AT3G02290.1 (AT3G02290.1 RING/U-box superfamily protein)

HSP 1 Score: 286.2 bits (731), Expect = 1.8e-77
Identity = 144/234 (61.54%), Postives = 170/234 (72.65%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            S+ S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH HEE EPLRS
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 EVDTDSDSLGSGGKR--NGSACL--EESKENL-GKSSLKFPSTKSTSGLGYA---YTSSE 180
           + D DS+S G GG +  N  + L  ++SKE    KSSL+   ++S S +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDET 227
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK M F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

[Close]

BLAST of Cucsa.238510 vs. TAIR10
Match: AT5G15790.1 (AT5G15790.1 RING/U-box superfamily protein)

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-74
Identity = 136/232 (58.62%), Postives = 164/232 (70.69%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG V  C  V+DFEDY NP+SSV R+C C  C + +FLN Y  +FRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60

Query: 61  T-SMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLR 120
             S+ ++ S DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH HEE+EPLR
Sbjct: 61  NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120

Query: 121 SEVDTDSDSLGSGGKRNGSACL---EESKENLGKSSLKF--PSTKSTSGLGYAYTSSEDE 180
           S+ D DS+S    G +  +  +   E+SKE   +SS +     T STS  G  Y +S+DE
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGL-YITSDDE 180

Query: 181 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDET 227
           DVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGK M F ET
Sbjct: 181 DVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231

[Close]

BLAST of Cucsa.238510 vs. TAIR10
Match: AT5G38895.3 (AT5G38895.3 RING/U-box superfamily protein)

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-74
Identity = 128/226 (56.64%), Postives = 160/226 (70.80%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+QSF++ Y  +F RG +H + S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           T MNST + D+SLS +Y SPP PLPYDADPRY R           KGSSH  EESEPLR 
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 225

Query: 121 EVDTDSDSLGSGGKRNGSACLEE-SKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPT 180
           + +  S++LG GG +   +  E+ SKE   K S  F  +K+  G+   Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 181 CLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDE 226
           CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGK MAFDE
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322

[Close]

BLAST of Cucsa.238510 vs. TAIR10
Match: AT5G41350.1 (AT5G41350.1 RING/U-box superfamily protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-21
Identity = 71/232 (30.60%), Postives = 99/232 (42.67%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG  CCC S    +    P    Y   T     + S              H+ +SS    
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSS-------------AHNRTSSAIST 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDG----LISRREKGSSHLHEESE 120
             +    + + S  + Y  PP P P+D      +    G     +  RE      + ES 
Sbjct: 61  GVVVVDTNLETSSPDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTES- 120

Query: 121 PLRSEVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSG-LGYA-YTSSEDE 180
              ++   D  +LG       + C  +  ++  ++ +   ST+     L  A +   E+E
Sbjct: 121 ---AQETVDGITLGVP-----TTCSHKETDSKIQTEIDLESTEEIDPKLSKAVFIPIEEE 180

Query: 181 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDET 227
           + CP CLEEY  ENPK+V KC HHFHL CI EWMERS+ CPVC K M FD T
Sbjct: 181 EDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFDST 210

[Close]

BLAST of Cucsa.238510 vs. TAIR10
Match: AT4G00335.1 (AT4G00335.1 RING-H2 finger B1A)

HSP 1 Score: 87.8 bits (216), Expect = 9.3e-18
Identity = 51/145 (35.17%), Postives = 65/145 (44.83%), Query Frame = 1


Query: 81  PRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRSEVDTDSDSLGSGGKRNGSAC 140
           P PLPYD      +      I  R  GSS   E         ++D  +L S      S  
Sbjct: 63  PAPLPYDLLLGRPQCTDSESIKGRMSGSSF--ETLATCEDLGESDCKTLAS------SVI 122

Query: 141 LEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFH 200
           L   K +  K              G      E+ED CP C E+Y  ENP++ TKC H FH
Sbjct: 123 LSPRKSDFSKHQ------------GLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEFH 182

Query: 201 LGCIYEWMERSDNCPVCGKAMAFDE 226
           L C+ EW+ERSD CP+C K + FD+
Sbjct: 183 LSCLLEWIERSDRCPICDKEVVFDD 187

[Close]

BLAST of Cucsa.238510 vs. NCBI nr
Match: gi|449447440|ref|XP_004141476.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus])

HSP 1 Score: 474.2 bits (1219), Expect = 1.3e-130
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Cucsa.238510 vs. NCBI nr
Match: gi|659118970|ref|XP_008459404.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 468.8 bits (1205), Expect = 5.5e-129
Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
           TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           EVDTDSDSLGS GK NGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]

BLAST of Cucsa.238510 vs. NCBI nr
Match: gi|658013032|ref|XP_008341811.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Malus domestica])

HSP 1 Score: 388.3 bits (996), Expect = 9.5e-105
Identity = 177/227 (77.97%), Postives = 201/227 (88.55%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCCL+ EDFEDYVNPNSS YR+C CL+CF+Q+FLN YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNSEDFEDYVNPNSSAYRDCACLNCFLQNFLNVYTSLFRRGEVHSIPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SMNS+AS DNSLS+MYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSH HEE+EPLRS
Sbjct: 61  ASMNSSASLDNSLSDMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D DS+SL +G K NGS C + SKE+  KSS+KF S K+T+G+G  Y+SSEDEDVCPTC
Sbjct: 121 DTDADSESLSTGEKWNGSTCEDGSKEHRSKSSMKFSSAKATTGIGNFYSSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGK M FDETT
Sbjct: 181 LEEYTHENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

[Close]

BLAST of Cucsa.238510 vs. NCBI nr
Match: gi|802751684|ref|XP_012088075.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas])

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 178/227 (78.41%), Postives = 196/227 (86.34%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCCL  EDFEDY+NPNSS YRNC CLSCF+Q+FL+ Y+ +FRRGEVHSV SSIQGA
Sbjct: 1   MGSVCCCLHAEDFEDYMNPNSSAYRNCMCLSCFLQNFLHLYSSLFRRGEVHSVPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SM S++S DNSLS+MYRSPPRPLPYDADPRY RLQRDGL+SRREKGSSH HEESEPLRS
Sbjct: 61  ASMTSSSSLDNSLSDMYRSPPRPLPYDADPRYFRLQRDGLVSRREKGSSHAHEESEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D DSDSL +G K   SAC E SKE   +SSLK  S K+T G+GY Y+SSEDEDVCPTC
Sbjct: 121 DNDGDSDSLSTGDKWTASACEEGSKEQRARSSLKLSSAKATVGIGYIYSSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERSD+CPVCGKAM FDETT
Sbjct: 181 LEEYTPENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKAMVFDETT 227

[Close]

BLAST of Cucsa.238510 vs. NCBI nr
Match: gi|694397011|ref|XP_009373769.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Pyrus x bretschneideri])

HSP 1 Score: 383.3 bits (983), Expect = 3.0e-103
Identity = 176/227 (77.53%), Postives = 200/227 (88.11%), Query Frame = 1


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60
           MG+VCCCL+ E+FEDYVNPNSS YR+C CLSCF+Q+FLN YT +FRR EVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNSENFEDYVNPNSSAYRDCACLSCFLQNFLNVYTSLFRREEVHSIPSSIQGA 60

Query: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120
            SMNS+AS DNSLS+MYRSPPRPLPYDADPRY RLQRDGLISRREKGSSH HEE+EPLRS
Sbjct: 61  ASMNSSASLDNSLSDMYRSPPRPLPYDADPRYNRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180
           + D DS+SL +G K NGSAC + SKE+  KSS+KF S K+T+G+G  Y+SSEDEDVCPTC
Sbjct: 121 DTDADSESLSTGEKWNGSACEDGSKEHRSKSSMKFSSAKATTGIGNFYSSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 228
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGK M FDETT
Sbjct: 181 LEEYTHENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

The following BLAST results are available for this feature:

BLAST of Cucsa.238510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING3_ARATH	3.2e-76	61.54	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 ...	[more]
RHB1A_ARATH	1.7e-16	35.17	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2...	[more]
RHF1A_ARATH	8.8e-10	39.47	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1	[more]
RHF2A_ARATH	9.7e-09	38.89	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1	[more]
PHRF1_HUMAN	1.1e-07	26.32	PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV...	[more]

BLAST of Cucsa.238510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSH8_CUCSA	9.1e-131	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642120 PE=4 SV=1	[more]
A0A067JND7_JATCU	1.6e-103	78.41	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25599 PE=4 SV=1	[more]
M5WZ55_PRUPE	2.3e-102	77.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011007mg PE=4 SV=1	[more]
A0A067GAA8_CITSI	8.3e-100	75.77	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040167mg PE=4 SV=1	[more]
V4T3V4_9ROSI	1.1e-99	75.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012668mg PE=4 SV=1	[more]

BLAST of Cucsa.238510 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02290.1	1.8e-77	61.54	RING/U-box superfamily protein	[more]
AT5G15790.1	1.4e-74	58.62	RING/U-box superfamily protein	[more]
AT5G38895.3	1.4e-74	56.64	RING/U-box superfamily protein	[more]
AT5G41350.1	2.4e-21	30.60	RING/U-box superfamily protein	[more]
AT4G00335.1	9.3e-18	35.17	RING-H2 finger B1A	[more]

BLAST of Cucsa.238510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447440\|ref\|XP_004141476.1\|	1.3e-130	100.00	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus]	[more]
gi\|659118970\|ref\|XP_008459404.1\|	5.5e-129	99.12	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
gi\|658013032\|ref\|XP_008341811.1\|	9.5e-105	77.97	PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Malus domestica]	[more]
gi\|802751684\|ref\|XP_012088075.1\|	2.3e-103	78.41	PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas]	[more]
gi\|694397011\|ref\|XP_009373769.1\|	3.0e-103	77.53	PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR024766	Znf_RING_H2
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR024766	Znf_RING_H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.238510.1	Cucsa.238510.1	mRNA
Cucsa.238510.2	Cucsa.238510.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 177..217 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 172..224 score: 2.6
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 174..217 score: 1.8
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 1..227 score: 4.0E
None	No IPR available	PANTHER	PTHR22763:SF34	SUBFAMILY NOT NAMED	coord: 1..227 score: 4.0E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 172..222 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.238510	Cla016502	Watermelon (97103) v1	cgywmB447
Cucsa.238510	Csa5G642120	Cucumber (Chinese Long) v2	cgycuB337
Cucsa.238510	MELO3C022050	Melon (DHL92) v3.5.1	cgymeB401
Cucsa.238510	ClCG11G004970	Watermelon (Charleston Gray)	cgywcgB416
Cucsa.238510	CSPI05G29560	Wild cucumber (PI 183967)	cgycpiB353
Cucsa.238510	CmaCh15G002210	Cucurbita maxima (Rimu)	cgycmaB0660
Cucsa.238510	CmoCh04G029440	Cucurbita moschata (Rifu)	cgycmoB0663
Cucsa.238510	CmoCh15G002320	Cucurbita moschata (Rifu)	cgycmoB0660
Cucsa.238510	Lsi03G001880	Bottle gourd (USVL1VR-Ls)	cgylsiB387
Cucsa.238510	Cp4.1LG13g08020	Cucurbita pepo (Zucchini)	cgycpeB0626
Cucsa.238510	Cp4.1LG01g22390	Cucurbita pepo (Zucchini)	cgycpeB0628
Cucsa.238510	MELO3C022050.2	Melon (DHL92) v3.6.1	cgymedB399
Cucsa.238510	CsaV3_5G038700	Cucumber (Chinese Long) v3	cgycucB357
Cucsa.238510	Cla97C11G211760	Watermelon (97103) v2	cgywmbB418
Cucsa.238510	Bhi06G000258	Wax gourd	cgywgoB472
Cucsa.238510	Carg05897	Silver-seed gourd	carcgyB0024
Cucsa.238510	Carg02207	Silver-seed gourd	carcgyB0316

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.238510	Melon (DHL92) v3.6.1	cgymedB400
Cucsa.238510	Wax gourd	cgywgoB470
Cucsa.238510	Cucurbita maxima (Rimu)	cgycmaB0663