Cp4.1LG13g08020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g08020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box superfamily protein
LocationCp4.1LG13 : 8173990 .. 8178019 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGGAGTGAAGATATGGAGCTTGTTATCCAGCTACCAGCAAAGGGGCACCGGCAGTGAGCGAGGGAGAAGGTAAGAGAAACATGAAGATATAGAGGGAAGAGGGCGGCTTTAATTTCGCGGGATTTGTAGCTTTCATTCCATCGCCTTCTATGTTCCAATTCAACGCCCTTCAAATGCGCAATCTCGAATTAGCTTGAAATTCCAATATCTGTGTGCGTGATTTTTCCGAAAAAGCGCGTGTATATAATTTTCGCATATTATCATTGTTCCCAATTTCCAGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCCCCACTTTACTCATCTCTCAAGGTACTTCTCTTTTTCCAACTATTCTCCGTGTCCCCGGGGACCCCTTTTGATGATCGCCCCATATTTTGATTGTTCTGTATTGGGTTTCTGATTCTTTTCATGATTTATGTGTATTCGTGGCCCGATCGTCTAATTCTCGAGTTTTTTCTTATGGGACTGTCGCATAATTTGAATATCGTTTTTCTTGTCCTGTACCTCTTATTCATCAATGGGTATATTGGATGAGTTATGTATGTCCTGGATGACGACGATCAGCTTGGTTTGCTATTGATGTTGTTATGGCATCTCGTCTCCTCATCATCGAAGGAAAGAATCCGTGTTTTCAGAGGTGACCCAGAAAAGGATATGGTCTAAGGATGGGTGGGTAACTTTGACCGAAGAGTATTGCATTTGATCAACACTTTTATTTATTTTTGGTTATTTCAACACTTTTTTTCTTTCATTGTTGTGATTATTGTGGTTTTGGACTGCTGCCGACAGATCCATATTCCCTGAAATATTGCTAATTGTTGGTTTAATACATGATCTTAGAAGGAATTGTCGGTTAACTTTCTTTCTAGGTGATCACATTGGCATTTCTGCACACAGTTGCTTTGAGGACAATCCCTTTGGATACTCATCTCATTAACATTACTGAACAGGGGATACTAATTTTACAGAGGAAAATCACAGTTTAAATAATCCAGTGTTTATTCAACTTCAAGAGGGAGGGTACTGGTTCGTGGAGGCAATTCTACTTCTGCGAGCTTATGTACTCTCGTCTCCGTTTTCCTGCATAATCATTGCCCGAGACCTCCATTTGAAAGCAAGTGAATAGCTAAATTGGTTTATCTGTCGACTTGGGAATCTGCCGGTTGGAAGATTGGTAGGAGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCGAATAGTTCACTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCAGTAAGCCCCATTTTTATTGTAATGTATATCAGGTTATTTTGCGATGTCACTCTCAAGTATGAAAATGTAACTATTTATGAATATATATGACAATGATTCTTTTTAATGTTAATGTTGGTGGAAATTTGAAGAAAGTTTTGGAAGTTTGAAACAAAATAAATTTTGATTACTGTACTTCTTCATATTTTTTCACCACAAAGTTGCAGAAAAAATTTCAATTATTGGTTTTATTTTACGAGGATTTGATATTTGTATAGTATTAGCGTCTAGAGTTGACAAACTTTATTTTTTTCCTGAAAAATCGACGATGAAAATCGGAACCTACAAATATTGATGCTACTTCCTTGTATGTCATATCATTGTGTTGTTTGTTTTCATTTGTGTCTTTCCATATTTCCTACCGAAATTATTGCCTTTGATTTATAATGTGCACTAGCGTGGGTATATATATAACCCACAACCCGCTAACAATTATAATATATTTATGGAAAAGCACTTGTAATTTGCTTCGAGTTTCACAAGTGTTTAGCTGTAGTTTGTAACATTATTCTCAAGATAATTGTATGACTCTATTTTCCCTCTTAATTTCTGTAGTACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAACCTTTAAGAGGTGATGTGGATACAGATTCAGATTCGTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTCGAAGGTTGATTTATTTATTGAGCTTCATTTTATCATGGATCTTATTTTCTTGCTTATAATAATCTATGGTTTTGGCCCTCAATATTCTTGTTTGTTGAGCTTCTGGGTGACAAACAAGTTACTGATCCACACATTTTTTAACGTGCCAAAATTTTGCAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTATGGTTCCTTTTATCCATCGGATCATGTAAACTTGTTCAATCACTATTTGAAAGCGACCCTATTCATTGTGTTCGAGTGTCTGACTCAAATTGATGTTTGGATCTGTTTATGTTCTCAAATTTATGTGTTTCACAAGTGTTCCTATTAACAAGTAAATCAGATTGATGTTTGGAGCCCACAATAATAACTAATGTTCCTTCCCCAGCTCCTTCACTGGTGAAGCTTTGGAAAATGGCCTTCAGATGAAATGCGATTCTTAGATGCTCTTCTACCTATAGAATAGCAGATTATCTTGCGTAGTATAAAATCATTCCCAATTAATGGTACTCTAGTGATCCTAAATCACATTAGAGGTGGAATTAGCCTTTAAGTTTGTTACTTAAGTAGATAGTACCAGTATTAAGCGATTAAGATTGCACGGTACAGCTGGTAATTTTACTGAAAAGGAAAAAGGAGCTCAACCTGTGCCTGTGATAAAACCTTTCGGTGTAGAGTGAATAATCCTCTGTAAATTTTTATGCAATCCTTTACTCACTTATGATGGTATCTTGAAGGATGTCCGCCTGATTCATGTTGTGTGTGAAACTTATGACCATCGCTTGGCTATGATATTTGACAGTTAGAAAACTGGTGGAATGTTGAGTACCACAAACAGGTTTAGTTTAAAACAGCTTGTCTTTTTAAAAATGTTTCAGATACAGTGTACATATGGTTTTTTCTGTATATATGATTCTCAACAGAATCTGAACTGATGCTTAAAATGTGGACAAATTTTAAATAGGATTCGAAGCTATTGTTAGCTTGATCTGTTTATAAAACAAAATTAAACGTAGGTTCCTAAGGAGTTTAACATGGTCGAATTCTGCAGAGACGGTATTCGTTTTTAGGCTGAATTCTGATTCTACTGATGAGCTTGATTAACATTAGAGATTAGATTATGTGATTTGTAAACATTAGAGATGTTTGGATGGGTTTCATTTACTTTTATTTCATACCACTATTTTAATGTCTTACTTTAGGTTATGGCGTTCGATGAAACGACTTGATGTGCGGACGAAGGCAGCAACATCTTGGGCATAACCAACAGCAACATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCTATGATGGTAAATATTATGAATCAAAGTATAACAAAGGTTGTATCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAATTGATGTTTCACCAAAATATCATCCTATAGGGGAAGAACAATAGGTGTTGTGAATGACTGAAACCTTTCCATTCCATGTTTGGTGTATCCATCTGTTTCCTTTCTTTTCTTGGAAGTGAAATGGGCTCTCACCTTTCAACCATCTCTTCTTCTCAAAGAAACAAAAA

mRNA sequence

AAGGGAGTGAAGATATGGAGCTTGTTATCCAGCTACCAGCAAAGGGGCACCGGCAGTGAGCGAGGGAGAAGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCCCCACTTTACTCATCTCTCAAGCTAAATTGGTTTATCTGTCGACTTGGGAATCTGCCGGTTGGAAGATTGGTAGGAGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCGAATAGTTCACTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCATACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAACCTTTAAGAGGTGATGTGGATACAGATTCAGATTCGTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTCGAAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTTATGGCGTTCGATGAAACGACTTGATGTGCGGACGAAGGCAGCAACATCTTGGGCATAACCAACAGCAACATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCTATGATGGTAAATATTATGAATCAAAGTATAACAAAGGTTGTATCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAATTGATGTTTCACCAAAATATCATCCTATAGGGGAAGAACAATAGGTGTTGTGAATGACTGAAACCTTTCCATTCCATGTTTGGTGTATCCATCTGTTTCCTTTCTTTTCTTGGAAGTGAAATGGGCTCTCACCTTTCAACCATCTCTTCTTCTCAAAGAAACAAAAA

Coding sequence (CDS)

AAGGGAGTGAAGATATGGAGCTTGTTATCCAGCTACCAGCAAAGGGGCACCGGCAGTGAGCGAGGGAGAAGGTTTCTCTGTCCTCCACCCACCACCGAAGATCGTATTCTCTTTCGGTCTTCTCTTCTCCCCCCACTTTACTCATCTCTCAAGCTAAATTGGTTTATCTGTCGACTTGGGAATCTGCCGGTTGGAAGATTGGTAGGAGTTGGCACAATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCGAATAGTTCACTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCATACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGCTCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAACCTTTAAGAGGTGATGTGGATACAGATTCAGATTCGTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTCGAAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTTATGGCGTTCGATGAAACGACTTGA

Protein sequence

KGVKIWSLLSSYQQRGTGSERGRRFLCPPPTTEDRILFRSSLLPPLYSSLKLNWFICRLGNLPVGRLVGVGTMGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGATPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRGDVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT
Homology
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BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match: RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-73
Identity = 141/234 (60.26%), Postives = 167/234 (71.37%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG V  C  VED ++Y+NPNSS+YRNC C+ C   +FLN Y  VFRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             ++S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH  EE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 193 DVDTDSDSLGSSG-KW-NGSACL---EESKEILGKSSLKFPSTKSTTGVGYA---YTSSE 252
           D D DS+S G  G KW N  + L   +  +E   KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 253 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 299
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

[Close]
BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match: RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.1e-15
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 153 PRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRGDVDTDS-DSLGSSGKWNGSA 212
           P PLPYD            L+ R +        +SE ++G +   S ++L +      S 
Sbjct: 63  PAPLPYDL-----------LLGRPQC------TDSESIKGRMSGSSFETLATCEDLGESD 122

Query: 213 CLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHF 272
           C    K +     L    +  +   G      E+ED CP C E+Y  ENP++ TKC H F
Sbjct: 123 C----KTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEF 182

Query: 273 HLGCIYEWMERSDNCPVCGKVMAFDE 298
           HL C+ EW+ERSD CP+C K + FD+
Sbjct: 183 HLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]
BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 1 

Query: 229 STKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPV 288
           S+ S+  V  +   +  +D C  CLE +T ++P  VT C H +HL CI EW +RS  CP+
Sbjct: 26  SSSSSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPI 85

Query: 289 C 290
           C
Sbjct: 86  C 86

[Close]
BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match: PHRF1_HUMAN (PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 4.5e-06
Identity = 34/116 (29.31%), Postives = 55/116 (47.41%), Query Frame = 1 

Query: 184 QEESEPLRGDVDTDSDSL---GSSGKWNGSACLE--------ESKEILGKSSLKFPSTKS 243
           +E S    GD   DSDS    G+ G+  G++  E        E  E  G++ L+   T+ 
Sbjct: 32  EESSVGSSGDSGDDSDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQG 91

Query: 244 TTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPV 289
                 ++ S +D + CP CL  +  +       C+H+F L CI EW + +++CPV
Sbjct: 92  KLEAAGSFNSDDDAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPV 147

[Close]
BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 7.7e-06
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 1 

Query: 249 CPTCLEEYTS-ENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           CP CL E+   E+ +++ KC+H FH+ CI  W+    NCP+C   +A    T
Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVT 228

[Close]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match: A0A0A0KSH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.7e-121
Identity = 213/227 (93.83%), Postives = 219/227 (96.48%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGAVCCCLSVEDFEDYVNPNSS+YRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           +VDTDSDSLGS GK NGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match: M5WZ55_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011007mg PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 2.2e-100
Identity = 175/227 (77.09%), Postives = 194/227 (85.46%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG+VCCCL+ EDFEDYVNPNSS YRNC CLSCFI++FLN YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNAEDFEDYVNPNSSAYRNCICLSCFIENFLNVYTSLFRRGEVHSIPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+S+AS DN +S+MYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSH  EE+EPLR 
Sbjct: 61  ASMTSSASLDNSISDMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           D D DS+ L +  KWNGSAC +  KE   KSS+KF S K+TT VG  Y SSEDEDVCPTC
Sbjct: 121 DTDADSECLSTGEKWNGSACEDGVKEHRSKSSMKFSSAKATTIVGNFYISSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGKVM FDETT
Sbjct: 181 LEEYTPENPKIMTKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match: A0A067JND7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25599 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.9e-100
Identity = 174/227 (76.65%), Postives = 192/227 (84.58%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG+VCCCL  EDFEDY+NPNSS YRNC CLSCF+Q+FL+ Y+ +FRRGEVHSV SSIQGA
Sbjct: 1   MGSVCCCLHAEDFEDYMNPNSSAYRNCMCLSCFLQNFLHLYSSLFRRGEVHSVPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+S++S DN LS+MYRSPPRPLPYDADPRY RLQRDGL+SRREKGSSH  EESEPLR 
Sbjct: 61  ASMTSSSSLDNSLSDMYRSPPRPLPYDADPRYFRLQRDGLVSRREKGSSHAHEESEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           D D DSDSL +  KW  SAC E SKE   +SSLK  S K+T G+GY Y+SSEDEDVCPTC
Sbjct: 121 DNDGDSDSLSTGDKWTASACEEGSKEQRARSSLKLSSAKATVGIGYIYSSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERSD+CPVCGK M FDETT
Sbjct: 181 LEEYTPENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKAMVFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match: I1KWJ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G251300 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.3e-99
Identity = 171/227 (75.33%), Postives = 194/227 (85.46%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGAVCCC +V+DFEDY+NPNSS+YRNC CLSCF+Q+FL  Y  +FRRGEVH++ SSIQGA
Sbjct: 1   MGAVCCCFNVDDFEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHAIPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+STAS DN LS+MYRSPPRPLPYDADPR+ R QR+GL+SRREKGSSHL EESEPLRG
Sbjct: 61  ASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEPLRG 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           DVD DS+SL S GKWN ++  + SKE   KSS++  S K TTG G  Y+SSE+EDVCPTC
Sbjct: 121 DVDADSESLNSGGKWNDTS-EDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERSD+CPVCGKVM FDETT
Sbjct: 181 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 226

[Close]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match: A0A0B2REM2_GLYSO (E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_037819 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.3e-99
Identity = 171/227 (75.33%), Postives = 194/227 (85.46%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGAVCCC +V+DFEDY+NPNSS+YRNC CLSCF+Q+FL  Y  +FRRGEVH++ SSIQGA
Sbjct: 1   MGAVCCCFNVDDFEDYMNPNSSVYRNCMCLSCFVQNFLTVYESIFRRGEVHAIPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+STAS DN LS+MYRSPPRPLPYDADPR+ R QR+GL+SRREKGSSHL EESEPLRG
Sbjct: 61  ASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQREGLVSRREKGSSHLNEESEPLRG 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           DVD DS+SL S GKWN ++  + SKE   KSS++  S K TTG G  Y+SSE+EDVCPTC
Sbjct: 121 DVDADSESLNSGGKWNDTS-EDGSKEYRSKSSVRLSSAKLTTGAGVVYSSSEEEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERSD+CPVCGKVM FDETT
Sbjct: 181 LEEYTEENPKIVTKCSHHFHLGCIYEWMERSDSCPVCGKVMVFDETT 226

[Close]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match: AT5G38895.3 (AT5G38895.3 RING/U-box superfamily protein)

HSP 1 Score: 278.1 bits (710), Expect = 6.4e-75
Identity = 130/226 (57.52%), Postives = 162/226 (71.68%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+QSF++ Y  +F RG +H + S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
           T M+ST + D+ LS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRFV---------KGSSHSGEESEPLRG 225

Query: 193 DVDTDSDSLGSSG-KWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPT 252
           D +  S++LG  G KW+ S   + SKE+  K S  F  +K+  G+   Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 253 CLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDE 298
           CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKVMAFDE
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322

[Close]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match: AT3G02290.1 (AT3G02290.1 RING/U-box superfamily protein)

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-74
Identity = 141/234 (60.26%), Postives = 167/234 (71.37%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG V  C  VED ++Y+NPNSS+YRNC C+ C   +FLN Y  VFRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             ++S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH  EE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 193 DVDTDSDSLGSSG-KW-NGSACL---EESKEILGKSSLKFPSTKSTTGVGYA---YTSSE 252
           D D DS+S G  G KW N  + L   +  +E   KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 253 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 299
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F+ET
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230

[Close]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match: AT5G15790.1 (AT5G15790.1 RING/U-box superfamily protein)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-72
Identity = 139/233 (59.66%), Postives = 164/233 (70.39%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG V  C  V+DFEDY NP+SS+ R+C C  C + +FLN Y  +FRRGE  S+ SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 133 TPMSSTAST--DNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPL 192
           T +S   ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH  EE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 193 RGDVDTDSDSLGSSG-KWNGSACL--EESKEILGKSSLKF--PSTKSTTGVGYAYTSSED 252
           R D D DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGL-YITSDD 180

Query: 253 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 299
           EDVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKVM F ET
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231

[Close]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match: AT5G41350.1 (AT5G41350.1 RING/U-box superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-20
Identity = 72/235 (30.64%), Postives = 96/235 (40.85%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG  CCC S    +    P    Y   T     + S  N  +     G V  V ++++ +
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVV-VVDTNLETS 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGL---------ISRREKGSSHL 192
           +P            + Y  PP P P+D      +    G          +S     +   
Sbjct: 61  SP------------DAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESA 120

Query: 193 QEESEPLRGDVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSS 252
           QE  + +   V T      +  K      LE ++EI  K S               +   
Sbjct: 121 QETVDGITLGVPTTCSHKETDSKIQTEIDLESTEEIDPKLSKA------------VFIPI 180

Query: 253 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDET 299
           E+E+ CP CLEEY  ENPK+V KC HHFHL CI EWMERS+ CPVC K M FD T
Sbjct: 181 EEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFDST 210

[Close]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match: AT4G00335.1 (AT4G00335.1 RING-H2 finger B1A)

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-16
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 1 

Query: 153 PRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRGDVDTDS-DSLGSSGKWNGSA 212
           P PLPYD            L+ R +        +SE ++G +   S ++L +      S 
Sbjct: 63  PAPLPYDL-----------LLGRPQC------TDSESIKGRMSGSSFETLATCEDLGESD 122

Query: 213 CLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHF 272
           C    K +     L    +  +   G      E+ED CP C E+Y  ENP++ TKC H F
Sbjct: 123 C----KTLASSVILSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCEHEF 182

Query: 273 HLGCIYEWMERSDNCPVCGKVMAFDE 298
           HL C+ EW+ERSD CP+C K + FD+
Sbjct: 183 HLSCLLEWIERSDRCPICDKEVVFDD 187

[Close]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match: gi|659118970|ref|XP_008459404.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 4.5e-123
Identity = 214/227 (94.27%), Postives = 221/227 (97.36%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGAVCCCLSVEDFEDYVNPNSS+YRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           +VDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match: gi|449447440|ref|XP_004141476.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus])

HSP 1 Score: 443.7 bits (1140), Expect = 2.5e-121
Identity = 213/227 (93.83%), Postives = 219/227 (96.48%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MGAVCCCLSVEDFEDYVNPNSS+YRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           +VDTDSDSLGS GK NGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK MAFDETT
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKAMAFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match: gi|658013032|ref|XP_008341811.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Malus domestica])

HSP 1 Score: 379.0 bits (972), Expect = 7.5e-102
Identity = 175/227 (77.09%), Postives = 197/227 (86.78%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG+VCCCL+ EDFEDYVNPNSS YR+C CL+CF+Q+FLN YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNSEDFEDYVNPNSSAYRDCACLNCFLQNFLNVYTSLFRRGEVHSIPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+S+AS DN LS+MYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSH  EE+EPLR 
Sbjct: 61  ASMNSSASLDNSLSDMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           D D DS+SL +  KWNGS C + SKE   KSS+KF S K+TTG+G  Y+SSEDEDVCPTC
Sbjct: 121 DTDADSESLSTGEKWNGSTCEDGSKEHRSKSSMKFSSAKATTGIGNFYSSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGKVM FDETT
Sbjct: 181 LEEYTHENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match: gi|1009127428|ref|XP_015880691.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 376.3 bits (965), Expect = 4.9e-101
Identity = 176/227 (77.53%), Postives = 197/227 (86.78%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG+VCCCL+V+DFEDY+NPNSS+YRNC CLSCFIQ+ LN Y  +F+RGEVHS+ SS+QGA
Sbjct: 1   MGSVCCCLNVQDFEDYMNPNSSVYRNCICLSCFIQNVLNVYASIFQRGEVHSLPSSVQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             MSSTAS DN L++MYRSPPRPLPYDADPRY RLQRDGLISRREKGSSH  EESEPLRG
Sbjct: 61  ASMSSTASYDNSLADMYRSPPRPLPYDADPRYFRLQRDGLISRREKGSSHSHEESEPLRG 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           DVD +++SL +  KWN SAC + SKE   KSS+KF S K+TTGV   YTSSEDEDVCPTC
Sbjct: 121 DVDAENESLSTGDKWNESACEDGSKEQRSKSSIKFSSAKTTTGVINFYTSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKIVTKCSHHFHLGCIYEWMERS++CPVCGKVM FDETT
Sbjct: 181 LEEYTQENPKIVTKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

[Close]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match: gi|694397011|ref|XP_009373769.1| (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Pyrus x bretschneideri])

HSP 1 Score: 374.0 bits (959), Expect = 2.4e-100
Identity = 174/227 (76.65%), Postives = 196/227 (86.34%), Query Frame = 1 

Query: 73  MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 132
           MG+VCCCL+ E+FEDYVNPNSS YR+C CLSCF+Q+FLN YT +FRR EVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNSENFEDYVNPNSSAYRDCACLSCFLQNFLNVYTSLFRREEVHSIPSSIQGA 60

Query: 133 TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 192
             M+S+AS DN LS+MYRSPPRPLPYDADPRY RLQRDGLISRREKGSSH  EE+EPLR 
Sbjct: 61  ASMNSSASLDNSLSDMYRSPPRPLPYDADPRYNRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 193 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 252
           D D DS+SL +  KWNGSAC + SKE   KSS+KF S K+TTG+G  Y+SSEDEDVCPTC
Sbjct: 121 DTDADSESLSTGEKWNGSACEDGSKEHRSKSSMKFSSAKATTGIGNFYSSSEDEDVCPTC 180

Query: 253 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMAFDETT 300
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGKVM FDETT
Sbjct: 181 LEEYTHENPKIITKCSHHFHLGCIYEWMERSESCPVCGKVMVFDETT 227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g08020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RING3_ARATH3.3e-7360.26E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana GN=At3g02290 PE=2 ... [more]
RHB1A_ARATH3.1e-1533.56Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana GN=RHB1A PE=2... [more]
RHF1A_ARATH4.4e-0940.98E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1[more]
PHRF1_HUMAN4.5e-0629.31PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV... [more]
ATL54_ARATH7.7e-0638.46RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
BLAST of Cp4.1LG13g08020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSH8_CUCSA1.7e-12193.83Uncharacterized protein OS=Cucumis sativus GN=Csa_5G642120 PE=4 SV=1[more]
M5WZ55_PRUPE2.2e-10077.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011007mg PE=4 SV=1[more]
A0A067JND7_JATCU2.9e-10076.65Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25599 PE=4 SV=1[more]
I1KWJ4_SOYBN9.3e-9975.33Uncharacterized protein OS=Glycine max GN=GLYMA_08G251300 PE=4 SV=1[more]
A0A0B2REM2_GLYSO9.3e-9975.33E3 ubiquitin-protein ligase OS=Glycine soja GN=glysoja_037819 PE=4 SV=1[more]
BLAST of Cp4.1LG13g08020 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G38895.36.4e-7557.52 RING/U-box superfamily protein[more]
AT3G02290.11.9e-7460.26 RING/U-box superfamily protein[more]
AT5G15790.13.9e-7259.66 RING/U-box superfamily protein[more]
AT5G41350.12.0e-2030.64 RING/U-box superfamily protein[more]
AT4G00335.11.8e-1633.56 RING-H2 finger B1A[more]
BLAST of Cp4.1LG13g08020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118970|ref|XP_008459404.1|4.5e-12394.27PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo][more]
gi|449447440|ref|XP_004141476.1|2.5e-12193.83PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus][more]
gi|658013032|ref|XP_008341811.1|7.5e-10277.09PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Malus domestica][more]
gi|1009127428|ref|XP_015880691.1|4.9e-10177.53PREDICTED: E3 ubiquitin-protein ligase At3g02290 isoform X2 [Ziziphus jujuba][more]
gi|694397011|ref|XP_009373769.1|2.4e-10076.65PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR024766Znf_RING_H2
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005840 ribosome
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g08020.1Cp4.1LG13g08020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 249..289
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 249..289
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 244..296
score: 5.4
IPR024766Zinc finger, RING-H2-typePFAMPF12678zf-rbx1coord: 246..289
score: 2.9
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 72..299
score: 2.4E
NoneNo IPR availablePANTHERPTHR22763:SF34SUBFAMILY NOT NAMEDcoord: 72..299
score: 2.4E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 243..295
score: 2.83