Carg02207 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02207
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase At3g02290
Location	Cucurbita_argyrosperma_scaffold_007 : 655017 .. 657470 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCAAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCAGTAAGCCCCATTTTTATTGTAATGTATATCAGGTTATTTTGCGATGTCACTCTCAAGTATGAAAATGTAACTATTTATGAATATATATATGACAATGATTCTTTTTAATGTTAATGTTGGTGGAAATTTGAAGAAAGTTTTGAAAGTTTGAAACAAAATAAATTTTGATTACCGTACTTCTTCATATTTTTTCTTCATATATTTATGGAAAAGCACTTGTAATTTGCTTCGAGTTTCACAAGTGTTTAGCTGTAGTTTGTAACTTTATTCTCAAGATAATTATATGACTCTATTTTTGCTCTTAATTCCTGTAGTACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGATCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAGCCTTTAAGAGGTGATGTGGATACAGATTCAGATTCTTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGGTTGATTTATTTATTGAGCTTCATTTGATCATGGATCTTATTTTCTTGCTTATAATAATCTATGGTTTTGGCCCTCAATATTCTTGTTTGTTGAGCTTCTGGGTGACAAACAAGTTACTGATGATCCATACATTTTTTAACGTGCCAAAATTTTGCAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTACGGTTCCTTTTATCCATCGGATCATGTAAACTTGTTGAATCACTATTTGAAAGCGACCCTATTCATTGTGTTCGAGTGTCTGACTCAAATTGATGTTCCTATTCACAAGTAAATCAGATTGATGGTACTCTAGTGATCCCAAATCACATTAAGCGATCAAGATTGTTACTTAAGTAGATAGTACAAGTATTAAGCGATCAAGATTGCTCGGTACAGCTGGTAATTTTACTGAAAAAGAAAGAGGAGCTCAACCTGTGCCTGTGATAAAACCTTTTGGTGTAGAGTGAATAATCCTCTGTAAATTTTTATGCAATCCTTTACTCACTCATGATGATGGTATCTTGAAGGATGTCCGCCTGATTCATGTTGTGTATGAAACTTATGACCATCGAAGCTATTGTTAGGTTGATATTGGCTATGATATTTGACCATCGAAGCTATTGGCTATGATATTTGACAGTTAGGAAACTGGTGGAATGTTGACAGGACAAATTTTAAATAGGATGCGAAGCTATTGTTAGCTTGATCTGTTTATAAAACAAAATTAAACGTCGGTTCCTAAGGAGTTTAACATGGTCGAATACTGCAGAGACGGGTATTTCTTTTTAGGCTGAATTCTGATTCTAGTGATGAGCTTGGTTAACATTAGAGATTAGATTATGTGATTTGTAAACTGGAAAGGAAACAACCTTAAGATGTCTGATTCTATTTTAATGTCTTAGGTTATGGCGTTCGATGAAACGACTTGATGTGCGGAAGAAGGCAGCAGCAACATCTTGGGCATAACCAACAGCAACATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCTATGATGGTAAATATTATGGAATCAAAGTATAACAAAGGTTGTATCCTCATTTGATCGTTTCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAATTGATGTTTCACCAAAATATCATCCTATAGGGGAAGAACAATAGGGGTGTTGTGAATGACTGAAACCTTTCCATTCCATGTTTGGTGTATCCATCTGTTTTCTTTCTTCTCTTGGAAGTGAAATAGCCTCTCACCTTTCAACCATCTCTTCTTCTCAAAGAAACAAATTGTCATCAAAATTCAGAATTTAATACTATAATACACTATTAGATTGGTTTCTACTGGAAAGTTTCTTATTCAGAAAGATAAACAATTGTGGTATCTGTTCTTCTAATTCTGATTAACATTCGATTGAACCAGACATAATTCAGAAGTCATAGCGCCAAATCTAACGAAGACAAGAAAAGAAGTGTATTTTCTTGATTCTGACCAGATCCTGATTCACCAAA

mRNA sequence

ATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCAAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCATACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGATCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAGCCTTTAAGAGGTGATGTGGATACAGATTCAGATTCTTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTACGGTTATGGCGTTCGATGAAACGACTTGATGTGCGGAAGAAGGCAGCAGCAACATCTTGGGCATAACCAACAGCAACATGGTCATTTGTGAATATTGCAGGATAAGATTTTTCTATGATGGTAAATATTATGGAATCAAAGTATAACAAAGGTTGTATCCTCATTTGATCGTTTCCTCATTTTCAAAGATTATTTCTAAGTTATACAGTTGAATTGATGTTTCACCAAAATATCATCCTATAGGGGAAGAACAATAGGGGTGTTGTGAATGACTGAAACCTTTCCATTCCATGTTTGGTGTATCCATCTGTTTTCTTTCTTCTCTTGGAAGTGAAATAGCCTCTCACCTTTCAACCATCTCTTCTTCTCAAAGAAACAAATTGTCATCAAAATTCAGAATTTAATACTATAATACACTATTAGATTGGTTTCTACTGGAAAGTTTCTTATTCAGAAAGATAAACAATTGTGGTATCTGTTCTTCTAATTCTGATTAACATTCGATTGAACCAGACATAATTCAGAAGTCATAGCGCCAAATCTAACGAAGACAAGAAAAGAAGTGTATTTTCTTGATTCTGACCAGATCCTGATTCACCAAA

Coding sequence (CDS)

ATGGGTGCTGTCTGCTGCTGTTTGAGCGTGGAGGATTTCGAAGACTATGTCAATCCAAATAGTTCAGTATATAGGAATTGCACCTGTCTTAGTTGCTTCATTCAGAGCTTCTTAAATGCATACACATTGGTTTTTCGAAGAGGAGAAGTGCATTCTGTCTCTTCATCAATTCAAGGGGCAACACCTATGAGTTCTACAGCATCAACAGATAACTGTTTATCTGAAATGTACCGATCACCTCCAAGGCCATTGCCTTATGATGCTGACCCCAGATATATCCGCTTGCAGCGGGATGGATTAATTTCTAGGCGAGAGAAGGGGTCAAGCCATTTACAAGAGGAGTCGGAGCCTTTAAGAGGTGATGTGGATACAGATTCAGATTCTTTGGGCTCATCTGGCAAATGGAATGGATCTGCTTGTCTTGAGGAATCTAAAGAAATTCTTGGCAAGTCATCTCTAAAGTTCCCATCAACTAAATCTACCACTGGAGTTGGGTATGCTTATACATCCTCTGAAGATGAGGATGTCTGTCCAACGTGTCTTGAAGAATATACTTCCGAGAATCCCAAGATAGTGACGAAATGCTCTCATCATTTTCACCTTGGATGTATCTATGAGTGGATGGAGAGAAGTGATAACTGTCCAGTTTGTGGCAAGGTACGGTTATGGCGTTCGATGAAACGACTTGATGTGCGGAAGAAGGCAGCAGCAACATCTTGGGCATAA

Protein sequence

MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGATPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRGDVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRLWRSMKRLDVRKKAAATSWA

Homology

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BLAST of Carg02207 vs. NCBI nr
Match: XP_023550226.1 (E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_023550228.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_023550229.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_023550230.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_023550231.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_023550232.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.6 bits (1176), Expect = 2.6e-125
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSS+YRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSLYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of Carg02207 vs. NCBI nr
Match: XP_022939618.1 (E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939619.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939620.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939621.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939622.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939623.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939624.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939625.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022992923.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima] >XP_022992924.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima] >XP_022992925.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima] >XP_022992926.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima] >XP_022992927.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima] >XP_022992928.1 E3 ubiquitin-protein ligase At3g02290-like [Cucurbita maxima])

HSP 1 Score: 456.1 bits (1172), Expect = 7.6e-125
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG
Sbjct: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTT VGYAYTSSEDEDVCPTC
Sbjct: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTDVGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 220

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BLAST of Carg02207 vs. NCBI nr
Match: XP_008459404.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 8.1e-119
Identity = 208/219 (94.98%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of Carg02207 vs. NCBI nr
Match: XP_004141476.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 hypothetical protein Csa_5G642120 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 4.5e-117
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGS GK NGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of Carg02207 vs. NCBI nr
Match: XP_022954554.1 (E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954569.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_023548844.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548852.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548861.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo] >XP_023548868.1 E3 ubiquitin-protein ligase At3g02290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.2 bits (1097), Expect = 3.8e-116
Identity = 202/220 (91.82%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLS++DFEDYVNPNSSVYRNCTCLSCFIQ+FLNAYTL+FRRGEVH VSSSIQGA
Sbjct: 1   MGAVCCCLSMDDFEDYVNPNSSVYRNCTCLSCFIQNFLNAYTLIFRRGEVHPVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T MSS +STDN LSE+YRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLRG
Sbjct: 61  TSMSSASSTDNSLSEIYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRG 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGS+GKWNGSACL+ESKE LGKSSLK PSTKSTTG GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLDESKENLGKSSLKIPSTKSTTGAGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYTSENPKIVTKC HHFHLGCIYEWMERSDNCPVCGKV
Sbjct: 181 LEEYTSENPKIVTKCCHHFHLGCIYEWMERSDNCPVCGKV 220

[Close]

BLAST of Carg02207 vs. TAIR10
Match: AT3G02290.1 (RING/U-box superfamily protein)

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-72
Identity = 138/228 (60.53%), Postives = 162/228 (71.05%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  VFRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
             ++S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH  EE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 DVDTDSDSLGSSG-KW-NGSACL---EESKEILGKSSLKFPSTKSTTGVGYA---YTSSE 180
           D D DS+S G  G KW N  + L   +  +E   KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]

BLAST of Carg02207 vs. TAIR10
Match: AT5G38895.3 (RING/U-box superfamily protein)

HSP 1 Score: 268.1 bits (684), Expect = 5.3e-72
Identity = 125/221 (56.56%), Postives = 157/221 (71.04%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGA CCC  V+ FE YVNPN+S+ RNC CL+CF+QSF++ Y  +F RG +H + S+++ A
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T M+ST + D+ LS +Y SPP PLPYDADPRY R           KGSSH  EESEPLRG
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRF---------VKGSSHSGEESEPLRG 225

Query: 121 DVDTDSDSLGSSG-KWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPT 180
           D +  S++LG  G KW+ S   + SKE+  K S  F  +K+  G+   Y  S+DED+CPT
Sbjct: 226 DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIEVYYADSDDEDICPT 285

Query: 181 CLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           CL++YT ENPKI+TKCSHHFHL CIYEWMERS+ CPVCGKV
Sbjct: 286 CLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKV 317

[Close]

BLAST of Carg02207 vs. TAIR10
Match: AT5G15790.1 (RING/U-box superfamily protein)

HSP 1 Score: 262.3 bits (669), Expect = 2.9e-70
Identity = 136/227 (59.91%), Postives = 160/227 (70.48%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MG V  C  V+DFEDY NP+SSV R+C C  C + +FLN Y  +FRRGE  S+ SS+Q A
Sbjct: 1   MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQ-A 60

Query: 61  TPMSSTAST--DNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPL 120
           T +S   ST  DN +S  + S PRPLPYDADPRY R +RD L+SRR+KGSSH  EE+EPL
Sbjct: 61  TNVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPL 120

Query: 121 RGDVDTDSDSLGSSG-KWNGSACL--EESKEILGKSSLKF--PSTKSTTGVGYAYTSSED 180
           R D D DS+S    G KW     +  E+SKE   +SS +     T ST+  G  Y +S+D
Sbjct: 121 RSDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEG-LYITSDD 180

Query: 181 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           EDVCPTCLEEY SENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 225

[Close]

BLAST of Carg02207 vs. TAIR10
Match: AT5G41350.1 (RING/U-box superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16
Identity = 57/184 (30.98%), Postives = 79/184 (42.93%), Query Frame = 0


Query: 51  HSVSSSIQGATPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDG---------LI 110
           H+ +SS      +    + +    + Y  PP P P+D      +    G          +
Sbjct: 38  HNRTSSAISTGVVVVDTNLETSSPDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREV 97

Query: 111 SRREKGSSHLQEESEPLRGDVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKST 170
           S     +   QE  + +   V T      +  K      LE ++EI  K S         
Sbjct: 98  SVDSANTESAQETVDGITLGVPTTCSHKETDSKIQTEIDLESTEEIDPKLSKA------- 157

Query: 171 TGVGYAYTSSEDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVR 226
                 +   E+E+ CP CLEEY  ENPK+V KC HHFHL CI EWMERS+ CPVC K  
Sbjct: 158 -----VFIPIEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEM 209

[Close]

BLAST of Carg02207 vs. TAIR10
Match: AT4G00335.1 (RING-H2 finger B1A)

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-16
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 172 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           E+ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K
Sbjct: 134 EEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of Carg02207 vs. Swiss-Prot
Match: sp|Q8LE94|RING3_ARATH (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.3e-71
Identity = 138/228 (60.53%), Postives = 162/228 (71.05%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MG V  C  VED ++Y+NPNSSVYRNC C+ C   +FLN Y  VFRRGE  S+ SS+Q  
Sbjct: 1   MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
             ++S++S DN LSE +RS PRPLPYDADPRY R     L+SRREKGSSH  EE EPLR 
Sbjct: 61  ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYFR----SLVSRREKGSSHSHEEVEPLRS 120

Query: 121 DVDTDSDSLGSSG-KW-NGSACL---EESKEILGKSSLKFPSTKSTTGVGYA---YTSSE 180
           D D DS+S G  G KW N  + L   +  +E   KSSL+   ++S + +  +   Y  SE
Sbjct: 121 DSDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSE 180

Query: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           DEDVCPTCLEEYTSENPKIVTKCSHHFHL CIYEWMERS+NCPVCGKV
Sbjct: 181 DEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKV 224

[Close]

BLAST of Carg02207 vs. Swiss-Prot
Match: sp|Q2HIJ8|RHB1A_ARATH (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.8e-15
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 172 EDEDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           E+ED CP C E+Y  ENP++ TKC H FHL C+ EW+ERSD CP+C K
Sbjct: 134 EEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of Carg02207 vs. Swiss-Prot
Match: sp|Q93ZF6|AIRP1_ARATH (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 175 DVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           D CP CLEEY  +NPK++TKC H FHL CI  WMERS+ CPVC K
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDK 146

[Close]

BLAST of Carg02207 vs. Swiss-Prot
Match: sp|Q9ZT42|RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08
Identity = 23/57 (40.35%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 174 EDVCPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRLWRSMKRLD 231
           +D C  CLE +   +P  +T C H +HL CI EW +RS  CP+C     W+S+   D
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMC-----WQSISLKD 81

[Close]

BLAST of Carg02207 vs. Swiss-Prot
Match: sp|Q4TU14|RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0


Query: 177 CPTCLEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRLWR 225
           C  CLE +T ++P  VT C H +HL CI EW +RS  CP+C ++ + R
Sbjct: 46  CSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLR 93

[Close]

BLAST of Carg02207 vs. TrEMBL
Match: tr|A0A1S3CA28|A0A1S3CA28_CUCME (E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 5.4e-119
Identity = 208/219 (94.98%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGS+GKWNGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSAGKWNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of Carg02207 vs. TrEMBL
Match: tr|A0A0A0KSH8|A0A0A0KSH8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 3.0e-117
Identity = 207/219 (94.52%), Postives = 212/219 (96.80%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTL+FRRGEVHSVSSSIQGA
Sbjct: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLIFRRGEVHSVSSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
           T M+STASTDN LSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHL EESEPLR 
Sbjct: 61  TSMNSTASTDNSLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           +VDTDSDSLGS GK NGSACLEESKE LGKSSLKFPSTKST+G+GYAYTSSEDEDVCPTC
Sbjct: 121 EVDTDSDSLGSGGKRNGSACLEESKENLGKSSLKFPSTKSTSGLGYAYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 220
           LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK
Sbjct: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGK 219

[Close]

BLAST of Carg02207 vs. TrEMBL
Match: tr|A0A2P5E976|A0A2P5E976_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220940 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 4.4e-97
Identity = 170/223 (76.23%), Postives = 191/223 (85.65%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MG+VCCCLSV+DFEDYVNPNSSVYRNC CLSCF+Q+F+N YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLSVDDFEDYVNPNSSVYRNCICLSCFLQNFINVYTSLFRRGEVHSLPSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
             M+STAS DN L++MYRSPPRPLPYDADPRY RLQRDGLISRR+KGSSH  EESEPLR 
Sbjct: 61  ASMTSTASLDNSLADMYRSPPRPLPYDADPRYFRLQRDGLISRRDKGSSHSHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           D D D +SL ++ KWN S C + SKE   KSSLK   TK+ TGVG  YTSSE+EDVCPTC
Sbjct: 121 DTDADPESLTTADKWNESVCEDGSKEHRSKSSLKLSVTKTMTGVGNIYTSSEEEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRLW 224
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERSD+CPVCGKV ++
Sbjct: 181 LEEYTPENPKIMTKCSHHFHLGCIYEWMERSDSCPVCGKVMVF 223

[Close]

BLAST of Carg02207 vs. TrEMBL
Match: tr|W9RK62|W9RK62_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis OX=981085 GN=L484_018166 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 7.6e-97
Identity = 170/220 (77.27%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MGAVCCC SVEDFEDYVNPNSSVYRNC CLSCF+Q+F+N YT +FRR EVHS+ SSIQGA
Sbjct: 1   MGAVCCCFSVEDFEDYVNPNSSVYRNCICLSCFLQNFINVYTSLFRRSEVHSLPSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
             +SST S DN L++MYRSPPRPLPYDADPRY RLQRDGLISRREKG+SH  EESEPLR 
Sbjct: 61  ASLSSTTSLDNSLADMYRSPPRPLPYDADPRYFRLQRDGLISRREKGTSHSHEESEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           D D DS+SL ++ KWN S C + SKE   KSSLK   TK+TTGVG  YTSSEDEDVCPTC
Sbjct: 121 DTDADSESLSTADKWNESVCEDGSKEHRSKSSLKLSVTKTTTGVGNIYTSSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKV 221
           LEEYT ENPKI+TKCSHHFHL CIYEWMERS++CPVCGKV
Sbjct: 181 LEEYTPENPKIMTKCSHHFHLACIYEWMERSESCPVCGKV 220

[Close]

BLAST of Carg02207 vs. TrEMBL
Match: tr|M5WZ55|M5WZ55_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G248900 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.3e-96
Identity = 169/223 (75.78%), Postives = 190/223 (85.20%), Query Frame = 0


Query: 1   MGAVCCCLSVEDFEDYVNPNSSVYRNCTCLSCFIQSFLNAYTLVFRRGEVHSVSSSIQGA 60
           MG+VCCCL+ EDFEDYVNPNSS YRNC CLSCFI++FLN YT +FRRGEVHS+ SSIQGA
Sbjct: 1   MGSVCCCLNAEDFEDYVNPNSSAYRNCICLSCFIENFLNVYTSLFRRGEVHSIPSSIQGA 60

Query: 61  TPMSSTASTDNCLSEMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHLQEESEPLRG 120
             M+S+AS DN +S+MYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSH  EE+EPLR 
Sbjct: 61  ASMTSSASLDNSISDMYRSPPRPLPYDADPRYIRLQRDGLISRREKGSSHSHEEAEPLRS 120

Query: 121 DVDTDSDSLGSSGKWNGSACLEESKEILGKSSLKFPSTKSTTGVGYAYTSSEDEDVCPTC 180
           D D DS+ L +  KWNGSAC +  KE   KSS+KF S K+TT VG  Y SSEDEDVCPTC
Sbjct: 121 DTDADSECLSTGEKWNGSACEDGVKEHRSKSSMKFSSAKATTIVGNFYISSEDEDVCPTC 180

Query: 181 LEEYTSENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVRLW 224
           LEEYT ENPKI+TKCSHHFHLGCIYEWMERS++CPVCGKV ++
Sbjct: 181 LEEYTPENPKIMTKCSHHFHLGCIYEWMERSESCPVCGKVMVF 223

The following BLAST results are available for this feature:

BLAST of Carg02207 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550226.1	2.6e-125	99.55	E3 ubiquitin-protein ligase At3g02290-like [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022939618.1	7.6e-125	99.55	E3 ubiquitin-protein ligase At3g02290-like [Cucurbita moschata] >XP_022939619.1 ...	[more]
XP_008459404.1	8.1e-119	94.98	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis melo]	[more]
XP_004141476.1	4.5e-117	94.52	PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Cucumis sativus] >KGN52530.1 h...	[more]
XP_022954554.1	3.8e-116	91.82	E3 ubiquitin-protein ligase At3g02290 [Cucurbita moschata] >XP_022954561.1 E3 ub...	[more]

BLAST of Carg02207 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02290.1	2.4e-72	60.53	RING/U-box superfamily protein	[more]
AT5G38895.3	5.3e-72	56.56	RING/U-box superfamily protein	[more]
AT5G15790.1	2.9e-70	59.91	RING/U-box superfamily protein	[more]
AT5G41350.1	2.4e-16	30.98	RING/U-box superfamily protein	[more]
AT4G00335.1	5.4e-16	60.42	RING-H2 finger B1A	[more]

BLAST of Carg02207 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LE94\|RING3_ARATH	4.3e-71	60.53	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
sp\|Q2HIJ8\|RHB1A_ARATH	9.8e-15	60.42	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
sp\|Q93ZF6\|AIRP1_ARATH	1.4e-13	66.67	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
sp\|Q9ZT42\|RHF2A_ARATH	1.4e-08	40.35	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]
sp\|Q4TU14\|RHF1A_ARATH	1.8e-08	45.83	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]

BLAST of Carg02207 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CA28\|A0A1S3CA28_CUCME	5.4e-119	94.98	E3 ubiquitin-protein ligase At3g02290 OS=Cucumis melo OX=3656 GN=LOC103498549 PE...	[more]
tr\|A0A0A0KSH8\|A0A0A0KSH8_CUCSA	3.0e-117	94.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G642120 PE=4 SV=1	[more]
tr\|A0A2P5E976\|A0A2P5E976_9ROSA	4.4e-97	76.23	43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_220940 PE=...	[more]
tr\|W9RK62\|W9RK62_9ROSA	7.6e-97	77.27	E3 ubiquitin-protein ligase OS=Morus notabilis OX=981085 GN=L484_018166 PE=4 SV=...	[more]
tr\|M5WZ55\|M5WZ55_PRUPE	1.3e-96	75.78	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G248900 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR024766	Znf_RING_H2
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02207-RA	Carg02207-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..217 e-value: 1.4E-6 score: 37.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..217 score: 12.002
IPR024766	Zinc finger, RING-H2-type	PFAM	PF12678	zf-rbx1	coord: 174..217 e-value: 2.2E-11 score: 43.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 156..221 e-value: 4.0E-16 score: 60.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..134
None	No IPR available	PANTHER	PTHR44400:SF2	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..222
None	No IPR available	PANTHER	PTHR44400	FAMILY NOT NAMED	coord: 1..222
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 171..221

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02207	Cla016502	Watermelon (97103) v1	carwmB0260
Carg02207	Csa5G642120	Cucumber (Chinese Long) v2	carcuB0293
Carg02207	MELO3C022050	Melon (DHL92) v3.5.1	carmeB0260
Carg02207	ClCG11G004970	Watermelon (Charleston Gray)	carwcgB0255
Carg02207	CSPI05G29560	Wild cucumber (PI 183967)	carcpiB0297
Carg02207	Cucsa.238510	Cucumber (Gy14) v1	carcgyB0316
Carg02207	CmaCh04G028130	Cucurbita maxima (Rimu)	carcmaB0374
Carg02207	CmaCh15G002210	Cucurbita maxima (Rimu)	carcmaB0362
Carg02207	CmoCh04G029440	Cucurbita moschata (Rifu)	carcmoB0370
Carg02207	CmoCh15G002320	Cucurbita moschata (Rifu)	carcmoB0362
Carg02207	Lsi03G001880	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02207	Cp4.1LG13g08020	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02207	Cp4.1LG01g22390	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02207	CsGy5G029000	Cucumber (Gy14) v2	carcgybB0280
Carg02207	MELO3C022050.2	Melon (DHL92) v3.6.1	carmedB0270
Carg02207	CsaV3_5G038700	Cucumber (Chinese Long) v3	carcucB0296
Carg02207	Cla97C11G211760	Watermelon (97103) v2	carwmbB0269
Carg02207	Bhi06G000258	Wax gourd	carwgoB0339

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02207	Carg05897	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02207	Cucurbita maxima (Rimu)	carcmaB0365
Carg02207	Watermelon (Charleston Gray)	carwcgB0254
Carg02207	Wax gourd	carwgoB0345