Cucsa.161020 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTAAAACTTACCCAGGAAATAATTGGAAGGACAAGAATTCACCCATTATTATTCCCTCTTCTCTTTGGGGAAAGTCATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGCTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTATCGTCATTCTCTTCTTCTTCTTCTTGTTCGTCTTTGTCCTCGACTTCATCTTTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAGTAAGTTAAAGTGTCAAGTCCCCCCAAATTTTCTTTACACTATGCTTAAATGGCATCTAATTCATATGTTTGTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAGGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGAGTTGAGAGATTTCATATTCTCAACTAAATATATGCGCCATATGCCTCCTTTGAATAAATTGAAGGTGTTGCTACTTATACAAAAATGAAAATAATTTAGAAAAAAAAACAACAACATTAAAGGTAGATAGTTGTGAACTTTAGTAGAAGAGTATCCATTGATTAATTTCTGTAGTAATGAAACTTAATTTGATGTGATACCAAATTTTGATAGAAAAAAGAAATTGTGCCTTTATGATGGAGCCTTTTATCTTGCCTTTTTGTTAAAGATAGTAAAAAGTAAGTATAAGATGAAAATTGCAATAATTATATTAACTTTTATGGTTGGATGAAAAAAaTTAAAGTGAGTCTGAAATTACGATCATTATGTTGGGGACTCCAAATGATTGGAATAATACAAATTTGAAAGGATGTTACACCTATTTATTCCACCATGTCCATCAAAATAGATCTGACTTTTTTAAAATTGAAAATTAGTTTGGCACATATATTGGTTAGGTGGAATCCAAGTTGGAAACACCCTTATGTGGACTCCACAATAAC TGCTAAAACTTACCCAGGAAATAATTGGAAGGACAAGAATTCACCCATTATTATTCCCTCTTCTCTTTGGGGAAAGTCATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGCTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTAtcgtcattctcttcttcttcttcttgttcgtctttgtcctcgacttcatcttTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAGGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGAGTTGAGAGATTTCATATTCTCAACTAAATATATGCGCCATATGCCTCCTTTGAATAAATTGAAGGTGTTGCTACTTATACAAAAATGAAAATAATTTAGAAAAAAAAACAACAACATTAAAGGTAGATAGTTGTGAACTTTAGTAGAAGAGTATCCATTGATTAATTTCTGTAGTAATGAAACTTAATTTGATGTGATACCAAATTTTGATAGAAAAAAGAAATTGTGCCTTTATGATGGAGCCTTTTATCTTGCCTTTTTGTTAAAGATAGTAAAAAGTAAGTATAAGATGAAAATTGCAATAATTATATTAACTTTTATGGTTGGATGAAAAAAATTAAAGTGAGTCTGAAATTACGATCATTATGTTGGGGACTCCAAATGATTGGAATAATACAAATTTGAAAGGATGTTACACCTATTTATTCCACCATGTCCATCAAAATAGATCTGACTTTTTTAAAATTGAAAATTAGTTTGGCACATATATTGGTTAGGTGGAATCCAAGTTGGAAACACCCTTATGTGGACTCCACAATAAC ATGGAGTCTAGGAAGTTGACAGTTGATGCGGATTTTGCTACAAGTGTTTTATGTGATGACTGGAATAGAAAGGAAGAAAAGTCCATTATCTCTCATTTCCAATTTACTGTAGCATATTCAGAAGGTTCAACCAGTTCGATTGGATCAATATCGTCATCGAGCGTTTGTGACGAAGATGCATTATCGTCATTCTCTTCTTCTTCTTCTTGTTCGTCTTTGTCCTCGACTTCATCTTTGTTGTCCCAAAGTGAACTTCGTGAGCAACAACTTCCTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTTTCATCTTTATCAGATGTGAAATCCATAGAAGACTTAGCAAAGAGAGAAAATGATTACAAAAAGAAAGACACTCGAATTAGTCCCAGGGCTACTATTTCAAAGAAGCATGGAAGGAGCTCTTTTGCAACCATGCTGTCTAAGGCAGACACTTTACTTTGA MESRKLTVDADFATSVLCDDWNRKEEKSIISHFQFTVAYSEGSTSSIGSISSSSVCDEDALSSFSSSSSCSSLSSTSSLLSQSELREQQLPIKKGLSKFYEGKSRTFSSLSDVKSIEDLAKRENDYKKKDTRISPRATISKKHGRSSFATMLSKADTLL*
BLAST of Cucsa.161020 vs. TrEMBL
Match: A0A0A0LLW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G372880 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.3e-42 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.161020 vs. TrEMBL
Match: W9R779_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005880 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1
BLAST of Cucsa.161020 vs. TrEMBL
Match: A5BBL4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011279 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16 Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 1
BLAST of Cucsa.161020 vs. TrEMBL
Match: F6HY89_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g03340 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.4e-16 Identity = 61/128 (47.66%), Postives = 83/128 (64.84%), Query Frame = 1
BLAST of Cucsa.161020 vs. TrEMBL
Match: W9S6E3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006987 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.0e-16 Identity = 71/161 (44.10%), Postives = 92/161 (57.14%), Query Frame = 1
BLAST of Cucsa.161020 vs. TAIR10
Match: AT4G26288.1 (AT4G26288.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 1
BLAST of Cucsa.161020 vs. TAIR10
Match: AT5G56550.1 (AT5G56550.1 oxidative stress 3) HSP 1 Score: 78.6 bits (192), Expect = 4.0e-15 Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 1
BLAST of Cucsa.161020 vs. TAIR10
Match: AT5G21940.1 (AT5G21940.1 unknown protein) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10 Identity = 48/156 (30.77%), Postives = 77/156 (49.36%), Query Frame = 1
BLAST of Cucsa.161020 vs. TAIR10
Match: AT3G43850.1 (AT3G43850.1 unknown protein) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09 Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 1
BLAST of Cucsa.161020 vs. TAIR10
Match: AT5G24890.1 (AT5G24890.1 unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 1
BLAST of Cucsa.161020 vs. NCBI nr
Match: gi|778671960|ref|XP_011649716.1| (PREDICTED: uncharacterized protein LOC105434656 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 7.4e-80 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Cucsa.161020 vs. NCBI nr
Match: gi|659088447|ref|XP_008444986.1| (PREDICTED: suppressor protein SRP40-like [Cucumis melo]) HSP 1 Score: 277.3 bits (708), Expect = 1.7e-71 Identity = 145/161 (90.06%), Postives = 153/161 (95.03%), Query Frame = 1
BLAST of Cucsa.161020 vs. NCBI nr
Match: gi|700207674|gb|KGN62793.1| (hypothetical protein Csa_2G372880 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 4.7e-42 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1
BLAST of Cucsa.161020 vs. NCBI nr
Match: gi|703095142|ref|XP_010095455.1| (hypothetical protein L484_005880 [Morus notabilis]) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 77/152 (50.66%), Postives = 95/152 (62.50%), Query Frame = 1
BLAST of Cucsa.161020 vs. NCBI nr
Match: gi|147790298|emb|CAN69977.1| (hypothetical protein VITISV_011279 [Vitis vinifera]) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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