Carg08268 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08268
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	oxidative stress 3
Location	Cucurbita_argyrosperma_scaffold_015 : 512463 .. 513160 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATCAAGAACTCATCCATTTCAATTCTTCTCTTTGTGGAAAGTCATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAGTGAGTTCATGTTCTTTGAACTAAAATGTAGAGCTCTGTTTCAAATTCTAAAGTTTTTGGCATCTTGAATTCATCTCTTATGCAGAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAAAGGGAAGCTCGAACTATTTATCGTTAGTGTCAAGTTTTAGTGTCAAGTTTAACGGGCGGTTCTAAAATTTACTTG

mRNA sequence

AAGATCAAGAACTCATCCATTTCAATTCTTCTCTTTGTGGAAAGTCATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAAAGGGAAGCTCGAACTATTTATCGTTAGTGTCAAGTTTTAGTGTCAAGTTTAACGGGCGGTTCTAAAATTTACTTG

Coding sequence (CDS)

ATGGAGTTCAGGAAGTTGACCGTTGATGCAGATTTTGCTACAAGTCTTTTTAATAGAAAGGAAGAGAAATGTTTTATCCCTCATCTTCTTCACTTTAGCGTCGTATCGTGTTCGGAAGATTCAACTAGTTCAATTGGATCGTTGTCGTCGTTATCGTCGTCGTCGTCGTCAAGCCTCTGTGACGACGATGCGTTATCGTCATTTTCATCTTCTTCTTCTTCTTCGTCGTCTTTGTTATCTCGAAGAGAAGTTTGTGAGGAACAACAGCTGCTTTGTATCAAAAAAGGGTTGTCAAAATTTTATGAAGGGAAATCACGAACCTTCTCATCCTTATCCGACGTGAAATGCGTAGAAGACTTAGCGAAGGGAGAGAATGATTATAGAAAGAAATACTCTCGAATTACTCCCAAGGCTACCATATCAAAGAAGCATGGAAGAGCCTCTCTTGCAACCTTAGTGTCTAAGATGGACATTTCACTTCGCCCCGAGTAA

Protein sequence

MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSLSSLSSSSSSSLCDDDALSSFSSSSSSSSSLLSRREVCEEQQLLCIKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE

Homology

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_023546661.1 (uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546662.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546663.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546664.1 uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546665.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546666.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546667.1 uncharacterized protein LOC111805706 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 153/163 (93.87%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXXXXXX 60
           MEFRKLTVDADFATSLFNRK+EKCFIPHLLHFS VSCSEDSTSSIG   XXXXXXXXXXX
Sbjct: 1   MEFRKLTVDADFATSLFNRKDEKCFIPHLLHFSDVSCSEDSTSSIG---XXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  IKKGLSKFYEGKSRTFSSLSDVKCVEDL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKG+NDYRKKYSRITPKATI KKHGRASLATL SKMDISLRPE
Sbjct: 121 AKGDNDYRKKYSRITPKATILKKHGRASLATLASKMDISLRPE 160

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_022961691.1 (uncharacterized protein LOC111462384 [Cucurbita moschata])

HSP 1 Score: 197.6 bits (501), Expect = 3.3e-47
Identity = 154/163 (94.48%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXXXXXX 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSE        XXXXXXXXXXXXX
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSE-------XXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKCV+DL
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKCVDDL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 156

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_022996858.1 (uncharacterized protein LOC111491976 [Cucurbita maxima])

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 150/163 (92.02%), Postives = 151/163 (92.64%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXXXXXX 60
           MEFRKLTVDADFATSLFNRKEEKCFIPHLL FSVVSCSE        XXXXXXXXXXXXX
Sbjct: 1   MEFRKLTVDADFATSLFNRKEEKCFIPHLLQFSVVSCSE------XXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKCVEDL 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  IKKGLSKFYEGKSRTFSSLSDVKCVE+L
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIKKGLSKFYEGKSRTFSSLSDVKCVEEL 120

Query: 121 AKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISLRPE 164
           AKGENDYRKKYSRITPKATISKKHGR SLATLVSKMDISLRPE
Sbjct: 121 AKGENDYRKKYSRITPKATISKKHGRVSLATLVSKMDISLRPE 157

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_008444987.1 (PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444989.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444990.1 PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo])

HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26
Identity = 123/161 (76.40%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSL----FNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXX 60
           ME RKLTVDADFATS+    +NRKEEK  I H      V+ SE STSSI  XXXXXXXXX
Sbjct: 1   MESRKLTVDADFATSVLCDDWNRKEEKSIISHFQF--TVAYSEGSTSSIXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKC 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     IKKGLSKFYEGKSRTFSSLSDVK 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQVPIKKGLSKFYEGKSRTFSSLSDVKS 120

Query: 121 VEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMD 158
           +EDLAK E D+RKK +RI+PKATISKKHGR+  ATLVSK D
Sbjct: 121 IEDLAKRETDHRKKDTRISPKATISKKHGRSYFATLVSKTD 159

[Close]

BLAST of Carg08268 vs. NCBI nr
Match: XP_011649716.1 (PREDICTED: uncharacterized protein LOC105434656 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 121/164 (73.78%), Postives = 132/164 (80.49%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSL----FNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXX 60
           ME RKLTVDADFATS+    +NRKEEK  I H      V+ SE STSS   XXXXXXXXX
Sbjct: 1   MESRKLTVDADFATSVLCDDWNRKEEKSIISHFQF--TVAYSEGSTSSXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKC 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      IKKGLSKFYEGKSRTFSSLSDVK 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLP---IKKGLSKFYEGKSRTFSSLSDVKS 120

Query: 121 VEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMDISL 161
           +EDLAK ENDY+KK +RI+P+ATISKKHGR+S AT++SK D  L
Sbjct: 121 IEDLAKRENDYKKKDTRISPRATISKKHGRSSFATMLSKADTLL 159

[Close]

BLAST of Carg08268 vs. TAIR10
Match: AT5G56550.1 (oxidative stress 3)

HSP 1 Score: 52.4 bits (124), Expect = 3.1e-07
Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKCVEDLAK---GENDY--RKKYSRIT------------ 152
           IK+GLSKFYEGKS++F+SL +VK +EDL K      +Y  ++K SR T            
Sbjct: 87  IKRGLSKFYEGKSQSFTSLGNVKSLEDLMKRGFKSRNYGAKRKSSRSTGGILDQSYKRVF 146

[Close]

BLAST of Carg08268 vs. TAIR10
Match: AT5G21940.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.1e-04
Identity = 26/75 (34.67%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTF--------SSLSDVKCVEDLAKGENDYRKK-----------YSR 149
           ++KG+SK+Y GKS++F        S+L+    ++DLAK EN Y ++            ++
Sbjct: 87  VRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLLCHQIWENNK 146

[Close]

BLAST of Carg08268 vs. TAIR10
Match: AT3G43850.1 (unknown protein)

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKC--VEDLAKGENDYRKK-----YSRITPKATISKKHG 151
           IK+ +SKFY+GKS++F SLS+     V+DL K EN Y ++       RI  +  ISKK  
Sbjct: 64  IKRAISKFYKGKSKSFMSLSETSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPF 123

[Close]

BLAST of Carg08268 vs. TAIR10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 43.1 bits (100), Expect = 1.9e-04
Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 94  KKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSR---ITPKATISKKHGRAS 149
           K GLSK+Y+GKS++F+SL++V  ++DL K  +  +    R     PKATIS K  R S
Sbjct: 77  KGGLSKYYKGKSQSFTSLANVTSLQDLVKRGSRTKSCCKRDYFYGPKATISMKATRTS 134

[Close]

BLAST of Carg08268 vs. TAIR10
Match: AT3G03170.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 4.2e-04
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 96  GLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKK 131
           GLSK Y+GKS++F++L++   VEDLAK EN +  K
Sbjct: 58  GLSKHYKGKSQSFTTLAEALTVEDLAKPENPFNAK 92

[Close]

BLAST of Carg08268 vs. TrEMBL
Match: tr|A0A1S3BBN3|A0A1S3BBN3_CUCME (uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-26
Identity = 123/161 (76.40%), Postives = 131/161 (81.37%), Query Frame = 0


Query: 1   MEFRKLTVDADFATSL----FNRKEEKCFIPHLLHFSVVSCSEDSTSSIGSXXXXXXXXX 60
           ME RKLTVDADFATS+    +NRKEEK  I H      V+ SE STSSI  XXXXXXXXX
Sbjct: 1   MESRKLTVDADFATSVLCDDWNRKEEKSIISHFQF--TVAYSEGSTSSIXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCIKKGLSKFYEGKSRTFSSLSDVKC 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     IKKGLSKFYEGKSRTFSSLSDVK 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQVPIKKGLSKFYEGKSRTFSSLSDVKS 120

Query: 121 VEDLAKGENDYRKKYSRITPKATISKKHGRASLATLVSKMD 158
           +EDLAK E D+RKK +RI+PKATISKKHGR+  ATLVSK D
Sbjct: 121 IEDLAKRETDHRKKDTRISPKATISKKHGRSYFATLVSKTD 159

[Close]

BLAST of Carg08268 vs. TrEMBL
Match: tr|A0A2P5D3J7|A0A2P5D3J7_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_100340 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSRI---TPKATISKKHGRASL 152
           +KKGLSK+Y+GK+RTF+SLSDVKCV+DL+K E  + K+  R    +PKA ISKK+ R S 
Sbjct: 88  MKKGLSKYYQGKARTFTSLSDVKCVQDLSKKEIPFVKRGHRTLFQSPKAIISKKNTRGST 147

Query: 153 ATLVSK 156
           + L+SK
Sbjct: 148 SCLISK 153

[Close]

BLAST of Carg08268 vs. TrEMBL
Match: tr|A0A1S2Z2J3|A0A1S2Z2J3_CICAR (uncharacterized protein LOC101489917 OS=Cicer arietinum OX=3827 GN=LOC101489917 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKK--YSRI-TPKATISKKHGRASL 152
           IK+GLSK+Y GKSRTF SLSDV+C+EDL+K E  + KK  YS   +PK +ISKK GR+  
Sbjct: 92  IKRGLSKYYRGKSRTFRSLSDVRCLEDLSKKEIPHHKKKAYSPFQSPKTSISKKAGRSCF 151

Query: 153 ATLVSK 156
            +L+SK
Sbjct: 152 TSLLSK 157

[Close]

BLAST of Carg08268 vs. TrEMBL
Match: tr|A0A2P5DDQ7|A0A2P5DDQ7_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_254370 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.0e-09
Identity = 38/66 (57.58%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSRI---TPKATISKKHGRASL 152
           +KKGLSK+Y+GK+RTF+SLSDVKCV+DLAK E  + K+  R    +PKATISKK+ R   
Sbjct: 89  MKKGLSKYYQGKARTFTSLSDVKCVQDLAKKEIPFVKRGHRTLFQSPKATISKKNTRGFT 148

Query: 153 ATLVSK 156
           +  +SK
Sbjct: 149 SCSISK 154

[Close]

BLAST of Carg08268 vs. TrEMBL
Match: tr|W9R779|W9R779_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005880 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-09
Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 0


Query: 93  IKKGLSKFYEGKSRTFSSLSDVKCVEDLAKGENDYRKKYSR---ITPKATISKKHGRASL 152
           IKKGLSK+Y GK+RTF+SLS+VKCVEDLAK E  + K+  R    +PKA ISKK+ R   
Sbjct: 90  IKKGLSKYYNGKARTFTSLSEVKCVEDLAKKEIPFVKRGHRPSFQSPKAIISKKNTRRGS 149

Query: 153 AT-LVSKMDISLR 162
           AT LVS   +S R
Sbjct: 150 ATSLVSSKTLSCR 162

The following BLAST results are available for this feature:

BLAST of Carg08268 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546661.1	1.7e-48	93.87	uncharacterized protein LOC111805706 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022961691.1	3.3e-47	94.48	uncharacterized protein LOC111462384 [Cucurbita moschata]	[more]
XP_022996858.1	1.5e-44	92.02	uncharacterized protein LOC111491976 [Cucurbita maxima]	[more]
XP_008444987.1	3.2e-26	76.40	PREDICTED: uncharacterized protein LOC103488165 [Cucumis melo] >XP_008444989.1 P...	[more]
XP_011649716.1	2.1e-25	73.78	PREDICTED: uncharacterized protein LOC105434656 [Cucumis sativus]	[more]

BLAST of Carg08268 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56550.1	3.1e-07	46.15	oxidative stress 3	[more]
AT5G21940.1	1.1e-04	34.67	unknown protein	[more]
AT3G43850.1	1.4e-04	43.08	unknown protein	[more]
AT4G26288.1	1.9e-04	44.83	FUNCTIONS IN: molecular_function unknown	[more]
AT3G03170.1	4.2e-04	54.29	unknown protein	[more]

BLAST of Carg08268 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08268 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BBN3\|A0A1S3BBN3_CUCME	2.1e-26	76.40	uncharacterized protein LOC103488165 OS=Cucumis melo OX=3656 GN=LOC103488165 PE=...	[more]
tr\|A0A2P5D3J7\|A0A2P5D3J7_PARAD	1.8e-09	57.58	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_100340 PE...	[more]
tr\|A0A1S2Z2J3\|A0A1S2Z2J3_CICAR	3.1e-09	59.09	uncharacterized protein LOC101489917 OS=Cicer arietinum OX=3827 GN=LOC101489917 ...	[more]
tr\|A0A2P5DDQ7\|A0A2P5DDQ7_9ROSA	4.0e-09	57.58	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_254370 PE=4 S...	[more]
tr\|W9R779\|W9R779_9ROSA	5.2e-09	58.90	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_005880 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08268-RA	Carg08268-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..81
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 38..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08268	Cla022193	Watermelon (97103) v1	carwmB0058
Carg08268	MELO3C011125	Melon (DHL92) v3.5.1	carmeB0058
Carg08268	ClCG08G012070	Watermelon (Charleston Gray)	carwcgB0063
Carg08268	CSPI02G22030	Wild cucumber (PI 183967)	carcpiB0063
Carg08268	Cucsa.161020	Cucumber (Gy14) v1	carcgyB0066
Carg08268	CmaCh05G005790	Cucurbita maxima (Rimu)	carcmaB0083
Carg08268	CmoCh05G006030	Cucurbita moschata (Rifu)	carcmoB0087
Carg08268	Lsi08G010640	Bottle gourd (USVL1VR-Ls)	carlsiB056
Carg08268	CsGy2G021770	Cucumber (Gy14) v2	carcgybB0060
Carg08268	MELO3C011125.2	Melon (DHL92) v3.6.1	carmedB0059
Carg08268	CsaV3_2G030660	Cucumber (Chinese Long) v3	carcucB0065
Carg08268	Cla97C08G155200	Watermelon (97103) v2	carwmbB0061
Carg08268	Bhi04G000717	Wax gourd	carwgoB0068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08268	Silver-seed gourd	carcarB066
Carg08268	Cucurbita maxima (Rimu)	carcmaB0071
Carg08268	Cucurbita maxima (Rimu)	carcmaB0074
Carg08268	Cucurbita moschata (Rifu)	carcmoB0078
Carg08268	Cucurbita pepo (Zucchini)	carcpeB0079
Carg08268	Cucurbita pepo (Zucchini)	carcpeB0085
Carg08268	Cucurbita pepo (Zucchini)	carcpeB0087
Carg08268	Cucumber (Chinese Long) v2	carcuB0059
Carg08268	Bottle gourd (USVL1VR-Ls)	carlsiB054
Carg08268	Melon (DHL92) v3.6.1	carmedB0061
Carg08268	Watermelon (97103) v1	carwmB0060