Cucsa.157860 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.157860
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Assimilatory nitrate reductase catalytic subunit
Location	scaffold01142 : 88396 .. 89130 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAA

mRNA sequence

ATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAA

Coding sequence (CDS)

ATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAA

Protein sequence

MPMDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQFPL*

Homology

[Close]

BLAST of Cucsa.157860 vs. TrEMBL
Match: A0A0A0KXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 8.9e-132
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 3   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 62
           MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 63  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 122
           DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 123 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 182
           EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 180

Query: 183 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 242
           IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF
Sbjct: 181 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 240

Query: 243 PL 245
           PL
Sbjct: 241 PL 242

[Close]

BLAST of Cucsa.157860 vs. TrEMBL
Match: A5C6V8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038105 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 83/221 (37.56%), Postives = 111/221 (50.23%), Query Frame = 1


Query: 32  NSNSSCTSDLSQDSAVS-SIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSL--SRIQSS 91
           N  +S T+D S++S +S S   S+  V+  +     P   V ++E      +  S    S
Sbjct: 12  NKRASSTADSSEESNLSKSNVLSNSLVISEQAAPLTPPWPVSSLEAYTQSGVDGSMQNGS 71

Query: 92  SRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFN 151
           +  S  I+  G  G +DPNRIP S+F+ +P+ P EWS AS+ESLFSIHVGN+SFS E   
Sbjct: 72  TTQSPPIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFSTEFAQ 131

Query: 152 FFKSGELLMNPNASQTL---SNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTS 211
             KSGEL      SQ L   S LPP  E    +  S+   K      TSS T   V    
Sbjct: 132 LGKSGEL----TKSQELIFPSGLPPVTEAADMDRSSQDMEKGSGVRETSSQTTKEV---F 191

Query: 212 SQNVADHKKEVTTTMDELRGRQSV--SNDSMNSSRSFQFPL 245
            +N  DH KE     +  R   S   S+ S+NS+ SF FP+
Sbjct: 192 RENAEDHGKEKMPPAEGFRNSASSHHSDGSINSTLSFAFPV 225

[Close]

BLAST of Cucsa.157860 vs. TrEMBL
Match: B9IK82_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s12980g PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-20
Identity = 87/235 (37.02%), Postives = 120/235 (51.06%), Query Frame = 1


Query: 31  SNSNSSCTSDLSQDSAVSSIFQSDP--------PVLQSKPDVAEPLGAVQTVENQPVDSL 90
           ++ +SS +S++  D   S   QS          P+L +  DV    G+V   E    + +
Sbjct: 17  ASDSSSRSSEVENDIPASPFIQSKQADVGLAQGPILPA--DVESSQGSVFPAEVPSHNPV 76

Query: 91  SRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSF 150
           + IQ     S  + + G  G +DPNRIP SIF+ +PSNP EWS ASN+SLFSI++GN SF
Sbjct: 77  TNIQVLPPPSPQLHVMGQPGGYDPNRIPSSIFA-KPSNPAEWSVASNDSLFSIYMGNGSF 136

Query: 151 SREH-FNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE-----IAVK----TFAEPV 210
           SR+H F  +KSGEL          ++L P +E    + K+E     I VK    T +E  
Sbjct: 137 SRDHAFMLYKSGELPRFDETGNASTSLSPVIEVENNDRKNEDISIDIKVKEEESTDSEEE 196

Query: 211 TSSSTAHPVSPTSSQNVADHK---KEVTTTMDELRGRQSVSNDSMNSSRSFQFPL 245
            S STA  + PT     A  K   +E    ++E+R   S SN      RSFQFPL
Sbjct: 197 ESESTAE-IRPTKEVPGATEKISCQEKMHLVEEIRVSFSSSN------RSFQFPL 241

[Close]

BLAST of Cucsa.157860 vs. TrEMBL
Match: M5XD52_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-18
Identity = 90/291 (30.93%), Postives = 131/291 (45.02%), Query Frame = 1


Query: 3   MDTTQSFKESKG-----QLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPV 62
           MD  Q   +SK      + D VN++   +    S+S+SS TS   + S  S +       
Sbjct: 1   MDDVQKNDDSKHLKVHFESDMVNYRRNSSFPSSSSSSSSSTSSSPRSSLESDV------- 60

Query: 63  LQSKPDVAEPLGAVQTV----ENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSI 122
                D A+  G+ +T     E+Q    L    SS        L+  L  +DP+RIP SI
Sbjct: 61  ----TDKADVNGSFETTQQGQESQGPPPLPEASSSQT------LAWSLQRYDPSRIPTSI 120

Query: 123 FSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFN-FFKSGELL---------------- 182
           F+ +PS   +WS ASNESLFS+HVGN+SFSRE F+  +KSGEL                 
Sbjct: 121 FASKPSTGMDWSVASNESLFSLHVGNNSFSREQFSMLYKSGELTYPDELFYIPTPLPTVT 180

Query: 183 --------MNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTSSQN 242
                   ++    +T+ N  P VE    E+ S    K   E V S+S    +    ++ 
Sbjct: 181 EAETVEMKIHNVEKETVENKDPNVEKKSVENMSANVDK---EKVESTSVKVEMDSVETEE 240

Query: 243 VADHKKEVTTT-------------MDELRGRQSV--SNDSMNSSRSFQFPL 245
            AD  ++   T             + E+RG  +   S+DS +S++SFQFPL
Sbjct: 241 AADESEKTDLTDIPSDHGGNKAPLIVEIRGSATSYRSDDSNHSTKSFQFPL 271

[Close]

BLAST of Cucsa.157860 vs. TrEMBL
Match: A0A067JTI0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.3e-18
Identity = 74/223 (33.18%), Postives = 123/223 (55.16%), Query Frame = 1


Query: 23  ETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSL 82
           ++D I  +  +  +C S+L  DS       S  P+++SK       GA++  +N     +
Sbjct: 20  KSDEIVAQQKNLGTCPSELFLDSV------SGDPLVESK-------GALEVSDNNN-PKM 79

Query: 83  SRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSF 142
           S  +SS+   S        G +DPNRIP +IF+G+P++P EWS ASNESLFSIH+GN+SF
Sbjct: 80  SVQESSTTAQS-------AGGYDPNRIPSAIFTGKPASPMEWSLASNESLFSIHMGNNSF 139

Query: 143 SREH-FNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPV 202
           +R+H +  +KSGEL   P   + ++N PP + P+  E++    +K   E +T  +     
Sbjct: 140 TRDHVYMLYKSGEL---PKPDE-MNNSPPNMFPV-METRKSGDLKMTEEKLTEPAKTETQ 199

Query: 203 SPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQFPL 245
            P   + V+   K+   + +++R       +S +S++SFQFP+
Sbjct: 200 LP--GKEVSGTSKKKAPSAEDVR-------NSSSSTQSFQFPV 207

[Close]

BLAST of Cucsa.157860 vs. TAIR10
Match: AT2G03630.1 (AT2G03630.1 unknown protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-17
Identity = 81/248 (32.66%), Postives = 107/248 (43.15%), Query Frame = 1


Query: 13  KGQLDQVN----HK-----ETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPD 72
           KG LD  N    HK     ET+ +   S S+S  +S  S  S+ SS     PP    +  
Sbjct: 22  KGSLDDENGDVEHKTIPLQETETVIINSESHSRLSSSSSSSSSSSSYLS--PPKDLPEEV 81

Query: 73  VAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSN-PT 132
           + E L       N P  S   +Q   R ++        G +DPNRIP S+F    SN P 
Sbjct: 82  LKESL-------NDPEISSPPVQVMDRDNN--------GKYDPNRIPSSVFERSKSNVPA 141

Query: 133 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLP----PFVEPLRAE 192
           EWS  SNESLFSIH+GN+SF+    +  KSGEL  +         LP    P  EP    
Sbjct: 142 EWSCTSNESLFSIHLGNNSFTGYGGDLMKSGELYKSGELLAYSPGLPMPPVPGSEPKPVV 201

Query: 193 SKSEIAVKTFAEPVTSSSTAHPVSPTSSQNVAD-HKKEVTTTMDELRGRQSV-SNDSMNS 245
            + ++      E V      H  S    +   + H+KE    +       S  SN S NS
Sbjct: 202 EEPKVVESDKEEKVVLVEETHTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNS 252

[Close]

BLAST of Cucsa.157860 vs. TAIR10
Match: AT3G02125.1 (AT3G02125.1 unknown protein)

HSP 1 Score: 76.3 bits (186), Expect = 3.0e-14
Identity = 52/124 (41.94%), Postives = 64/124 (51.61%), Query Frame = 1


Query: 21  HKETDAISDRSNSNSSCTSDLSQDSAVS-SIFQSDPPVLQSKPDVAEPLGAVQTVENQPV 80
           H+  D++S RS+S SS  +  S D       F    P L +    A+ L       N  V
Sbjct: 10  HQWKDSVSSRSSSRSSSITSASSDGHFDIRHFPLPKPSLSASE--AQKLRESHQAYNSSV 69

Query: 81  DSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGN 140
            S +   SSS  S+H      L  +DP RIP S+FS +P N TEWS ASNESLFSIH GN
Sbjct: 70  SSYT---SSSWSSNHQNHLIDLPGYDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGN 128

Query: 141 SSFS 144
            S S
Sbjct: 130 FSIS 128

[Close]

BLAST of Cucsa.157860 vs. TAIR10
Match: AT1G74220.1 (AT1G74220.1 unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-11
Identity = 78/265 (29.43%), Postives = 108/265 (40.75%), Query Frame = 1


Query: 1   MPMDTTQSF----KESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPP 60
           M     QSF     +S   L      E   I   S+S+SSC+S            +++P 
Sbjct: 1   MESSQEQSFFSPTNQSSRNLASKPETEDPIIRLSSSSSSSCSS-----------IEAEP- 60

Query: 61  VLQSKPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSG 120
               +PD       V+  ++ P   + R   S+  ++    S P  N  P RIP  +F+ 
Sbjct: 61  ----RPDQNHNHNNVE--QSPPTQVMER---STNNTTTTTTSTP--NTPPYRIPSHVFAR 120

Query: 121 RPSNPTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLR 180
             S   EWST SNESLFSIH+GN+SF+    ++FKSGEL      S   S LP  +    
Sbjct: 121 TTSTAPEWSTISNESLFSIHMGNNSFTGG--DYFKSGELTFPQPPSPITSPLPSPLPSTP 180

Query: 181 AESKSEIAVKTFAEPVT---------SSSTAHPVSPTSSQNVADHKKEVTTTMDELRGR- 240
                  AV   AE  T          +  A+  S    Q  A   +EV    +      
Sbjct: 181 HNVNQGGAVGAAAEVKTPVDIGKKAAETDKAYRASKEDEQKAAASIREVIMANEAANNNN 240

Query: 241 ------QSVSNDSMN-SSRSFQFPL 245
                 +SVS  S N S +SF FP+
Sbjct: 241 KTNKLDRSVSRRSENLSVKSFAFPV 240

[Close]

BLAST of Cucsa.157860 vs. TAIR10
Match: AT5G39200.1 (AT5G39200.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08
Identity = 45/145 (31.03%), Postives = 68/145 (46.90%), Query Frame = 1


Query: 104 HDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFNFFKSGEL-----LMN 163
           ++P+RIP S+F+   +   EWS  SNESLFSIH+G+ SFS+     +KSGEL       +
Sbjct: 9   YEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK----MYKSGELTNFEYTAS 68

Query: 164 PNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTT 223
           P  S   +N+   + P  A +K          P T +       P       D ++++  
Sbjct: 69  PYISYYNNNIDNKIAPTDAGTKEVNITMVETGPKTGNRDGLTNVPK-----PDPRQQIPI 128

Query: 224 TMDELRGRQSVSNDSMNSSRSFQFP 244
           +      +   S  S NS+ SF FP
Sbjct: 129 SPT----KSCHSETSNNSTTSFAFP 140

[Close]

BLAST of Cucsa.157860 vs. NCBI nr
Match: gi|778707424|ref|XP_011656011.1| (PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 5.2e-133
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1


Query: 1   MPMDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQS 60
           MPMDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQS
Sbjct: 1   MPMDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQS 60

Query: 61  KPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSN 120
           KPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSN
Sbjct: 61  KPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSN 120

Query: 121 PTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESK 180
           PTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESK
Sbjct: 121 PTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESK 180

Query: 181 SEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSF 240
           SEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSF
Sbjct: 181 SEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSF 240

Query: 241 QFPL 245
           QFPL
Sbjct: 241 QFPL 244

[Close]

BLAST of Cucsa.157860 vs. NCBI nr
Match: gi|700197334|gb|KGN52511.1| (hypothetical protein Csa_5G639470 [Cucumis sativus])

HSP 1 Score: 477.6 bits (1228), Expect = 1.3e-131
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 3   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 62
           MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 63  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 122
           DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 123 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 182
           EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 180

Query: 183 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 242
           IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF
Sbjct: 181 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 240

Query: 243 PL 245
           PL
Sbjct: 241 PL 242

[Close]

BLAST of Cucsa.157860 vs. NCBI nr
Match: gi|659118928|ref|XP_008459383.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 223/242 (92.15%), Postives = 232/242 (95.87%), Query Frame = 1


Query: 3   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 62
           MD+TQSFK+SKGQLDQVNHKETDAISDRSNS+SSCTSDLSQDSAVSSIFQSDPPVLQSK 
Sbjct: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60

Query: 63  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 122
           DVAEPLGAVQTVENQ   SLSRIQSSSRGSSHIRLSG LGNHDPNRIPVSIFSGRPSNP 
Sbjct: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120

Query: 123 EWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSE 182
           EWSTASNESLFSIHVGN+SFSREHFNFFKSGELLMNPN+SQTLSNLPPFVEPLRA+SKSE
Sbjct: 121 EWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSE 180

Query: 183 IAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 242
           I VKT A+PVTS+STA P+SPTSS NVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF
Sbjct: 181 ITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQF 240

Query: 243 PL 245
           PL
Sbjct: 241 PL 242

[Close]

BLAST of Cucsa.157860 vs. NCBI nr
Match: gi|147803535|emb|CAN77667.1| (hypothetical protein VITISV_038105 [Vitis vinifera])

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 83/221 (37.56%), Postives = 111/221 (50.23%), Query Frame = 1


Query: 32  NSNSSCTSDLSQDSAVS-SIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSL--SRIQSS 91
           N  +S T+D S++S +S S   S+  V+  +     P   V ++E      +  S    S
Sbjct: 12  NKRASSTADSSEESNLSKSNVLSNSLVISEQAAPLTPPWPVSSLEAYTQSGVDGSMQNGS 71

Query: 92  SRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFN 151
           +  S  I+  G  G +DPNRIP S+F+ +P+ P EWS AS+ESLFSIHVGN+SFS E   
Sbjct: 72  TTQSPPIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFSTEFAQ 131

Query: 152 FFKSGELLMNPNASQTL---SNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTS 211
             KSGEL      SQ L   S LPP  E    +  S+   K      TSS T   V    
Sbjct: 132 LGKSGEL----TKSQELIFPSGLPPVTEAADMDRSSQDMEKGSGVRETSSQTTKEV---F 191

Query: 212 SQNVADHKKEVTTTMDELRGRQSV--SNDSMNSSRSFQFPL 245
            +N  DH KE     +  R   S   S+ S+NS+ SF FP+
Sbjct: 192 RENAEDHGKEKMPPAEGFRNSASSHHSDGSINSTLSFAFPV 225

[Close]

BLAST of Cucsa.157860 vs. NCBI nr
Match: gi|731418687|ref|XP_010660767.1| (PREDICTED: uncharacterized protein LOC104881651 [Vitis vinifera])

HSP 1 Score: 108.6 bits (270), Expect = 1.6e-20
Identity = 83/221 (37.56%), Postives = 111/221 (50.23%), Query Frame = 1


Query: 32  NSNSSCTSDLSQDSAVS-SIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSL--SRIQSS 91
           N  +S T+D S++S +S S   S+  V+  +     P   V ++E      +  S    S
Sbjct: 12  NKRASSTADSSEESNLSKSNVLSNSLVISEQAAPLTPPWPVSSLEAYTQSGVDGSMQNGS 71

Query: 92  SRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFN 151
           +  S  I+  G  G +DPNRIP S+F+ +P+ P EWS AS+ESLFSIHVGN+SFS E   
Sbjct: 72  TTQSPPIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFSTEFAQ 131

Query: 152 FFKSGELLMNPNASQTL---SNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTS 211
             KSGEL      SQ L   S LPP  E    +  S+   K      TSS T   V    
Sbjct: 132 LGKSGEL----TKSQELIFPSGLPPVTEAADMDRSSQDMEKGSGVRETSSQTTKEV---F 191

Query: 212 SQNVADHKKEVTTTMDELRGRQSV--SNDSMNSSRSFQFPL 245
            +N  DH KE     +  R   S   S+ S+NS+ SF FP+
Sbjct: 192 RENAEDHGKEKMPPAEGFRNSASSHHSDGSINSTLSFAFPV 225

The following BLAST results are available for this feature:

BLAST of Cucsa.157860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK8_CUCSA	8.9e-132	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1	[more]
A5C6V8_VITVI	1.1e-20	37.56	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038105 PE=4 SV=1	[more]
B9IK82_POPTR	3.2e-20	37.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s12980g PE=4 SV=2	[more]
M5XD52_PRUPE	1.7e-18	30.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1	[more]
A0A067JTI0_JATCU	2.3e-18	33.18	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1	[more]

BLAST of Cucsa.157860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03630.1	1.7e-17	32.66	unknown protein	[more]
AT3G02125.1	3.0e-14	41.94	unknown protein	[more]
AT1G74220.1	7.0e-11	29.43	unknown protein	[more]
AT5G39200.1	1.9e-08	31.03	unknown protein	[more]

BLAST of Cucsa.157860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778707424\|ref\|XP_011656011.1\|	5.2e-133	100.00	PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus]	[more]
gi\|700197334\|gb\|KGN52511.1\|	1.3e-131	100.00	hypothetical protein Csa_5G639470 [Cucumis sativus]	[more]
gi\|659118928\|ref\|XP_008459383.1\|	1.7e-120	92.15	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|147803535\|emb\|CAN77667.1\|	1.6e-20	37.56	hypothetical protein VITISV_038105 [Vitis vinifera]	[more]
gi\|731418687\|ref\|XP_010660767.1\|	1.6e-20	37.56	PREDICTED: uncharacterized protein LOC104881651 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.157860.1	Cucsa.157860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33673	FAMILY NOT NAMED	coord: 102..244 score: 8.5
None	No IPR available	PANTHER	PTHR33673:SF1	GENOMIC DNA, CHROMOSOME 5, TAC CLONE:K3K3	coord: 102..244 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.157860	Cla016519	Watermelon (97103) v1	cgywmB285
Cucsa.157860	Csa5G639470	Cucumber (Chinese Long) v2	cgycuB230
Cucsa.157860	MELO3C022033	Melon (DHL92) v3.5.1	cgymeB265
Cucsa.157860	MELO3C012154	Melon (DHL92) v3.5.1	cgymeB266
Cucsa.157860	ClCG11G004790	Watermelon (Charleston Gray)	cgywcgB267
Cucsa.157860	CSPI05G29370	Wild cucumber (PI 183967)	cgycpiB236
Cucsa.157860	CmaCh15G002350	Cucurbita maxima (Rimu)	cgycmaB0439
Cucsa.157860	CmaCh04G028000	Cucurbita maxima (Rimu)	cgycmaB0441
Cucsa.157860	CmoCh15G002420	Cucurbita moschata (Rifu)	cgycmoB0440
Cucsa.157860	CmoCh04G029320	Cucurbita moschata (Rifu)	cgycmoB0442
Cucsa.157860	Lsi03G001700	Bottle gourd (USVL1VR-Ls)	cgylsiB254
Cucsa.157860	Cp4.1LG13g08230	Cucurbita pepo (Zucchini)	cgycpeB0423
Cucsa.157860	Cp4.1LG01g22560	Cucurbita pepo (Zucchini)	cgycpeB0425
Cucsa.157860	MELO3C022033.2	Melon (DHL92) v3.6.1	cgymedB265
Cucsa.157860	MELO3C012154.2	Melon (DHL92) v3.6.1	cgymedB266
Cucsa.157860	CsaV3_5G038510	Cucumber (Chinese Long) v3	cgycucB244
Cucsa.157860	Cla97C11G211560	Watermelon (97103) v2	cgywmbB267
Cucsa.157860	Bhi06G000278	Wax gourd	cgywgoB308
Cucsa.157860	Bhi07G001221	Wax gourd	cgywgoB311
Cucsa.157860	Carg05882	Silver-seed gourd	carcgyB0021
Cucsa.157860	Carg02214	Silver-seed gourd	carcgyB0310

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.157860	Cucurbita pepo (Zucchini)	cgycpeB0424
Cucsa.157860	Bottle gourd (USVL1VR-Ls)	cgylsiB253
Cucsa.157860	Melon (DHL92) v3.6.1	cgymedB267
Cucsa.157860	Silver-seed gourd	carcgyB0309
Cucsa.157860	Cucumber (Chinese Long) v3	cgycucB241
Cucsa.157860	Watermelon (97103) v2	cgywmbB268
Cucsa.157860	Cucumber (Gy14) v1	cgycgyB060
Cucsa.157860	Cucurbita moschata (Rifu)	cgycmoB0439
Cucsa.157860	Wild cucumber (PI 183967)	cgycpiB233
Cucsa.157860	Cucumber (Chinese Long) v2	cgycuB227
Cucsa.157860	Melon (DHL92) v3.5.1	cgymeB267
Cucsa.157860	Watermelon (Charleston Gray)	cgywcgB269
Cucsa.157860	Watermelon (97103) v1	cgywmB284