CmoCh15G002420 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh15G002420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionValine--tRNA ligase
LocationCmo_Chr15 : 1196815 .. 1197867 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCATAAAGAAACCGATGTTATCCCTGATCGCCACAACTCCAATTCTTCATCTACCTCGGAGTCACGAGACTCAGCTCTTCAACCAAAACCAGATGTTTTCGAGTTTATGGGAGCTGTGCAAACAGCGGAGAATTTGTCTCTGGGTTCATGTAGAATCCAGAGTTCTTCTCAGATTCGATTATCGGGGGTGCTTGAAAACCATGATCCAAACCGAATACCTATATCGATCTTCTCTGGTAAACCTTCAAATCCTATGGAATGGAGCACTGCTTCGAATGAATCATTGTTCAGTATTCATGTGGGAAACAGCAGCTTTTCAAGGGAGAACTTCAATTTTTTTACCAAGTCTGGAGAATTGATGTTGAACCCCAATTCATCCCTGAATCTACCCAGCCTGCCCCCTCTTGTTGAACCACCAAGAGTTGAGAGTAAAACAGGAATCACAGTGAATGTCTCGGCTGAACCAGTGACATCAACTGGACCTCAAATTCCAGCCATATCAGTTCATCAAAAAGAACCCACCACGACACCTACAGATGAGCTTCGAGGTCGCCAGAGTGTGTCAAACGACAGCATGAATAGCTCTCATTCGTTTCAGTTCCCACTGTAAGCAATCCTGAATCATAGTCATAGATATAATGGCTGTTTTAGAAATGTTTTCACTTTGAACTTGGAATCTGAATTGTTGTGGCTATGAATTCTGCCTTGTTTTTTTTATCAGATTGGCAAGTGAAGGTGCAACGCCAAAAACAACCAGCTCCGTCTCAACAGACTCAGGTGCAACACCACAACAACAGCTAGTGACGAAGCTGCAAACAAATAGGCAGCAGTCAATGAAGCAGGAATCGCCAGAGCATGAATCTCCATCTTCATCTCATGAATTCACGGCACCGCCTCCGGCCACAAACTCGGGTTCGGGCTGGTTTTCCTGCTTCTCGTGGTGTCGATGCCGGTGACGGGATCTCTGCTTGATGAATGTACTACTTGTTTTACGCTCCTAGCTAATTAGTTCTTTCAAATTGAAAGGAAGAAACACAAACAACATGAG

mRNA sequence

ATGGCCCATAAAGAAACCGATGTTATCCCTGATCGCCACAACTCCAATTCTTCATCTACCTCGGAGTCACGAGACTCAGCTCTTCAACCAAAACCAGATGTTTTCGAGTTTATGGGAGCTGTGCAAACAGCGGAGAATTTGTCTCTGGGTTCATGTAGAATCCAGAGTTCTTCTCAGATTCGATTATCGGGGGTGCTTGAAAACCATGATCCAAACCGAATACCTATATCGATCTTCTCTGGTAAACCTTCAAATCCTATGGAATGGAGCACTGCTTCGAATGAATCATTGTTCAGTATTCATGTGGGAAACAGCAGCTTTTCAAGGGAGAACTTCAATTTTTTTACCAAGTCTGGAGAATTGATGTTGAACCCCAATTCATCCCTGAATCTACCCAGCCTGCCCCCTCTTGTTGAACCACCAAGAGTTGAGAGTAAAACAGGAATCACAGTGAATGTCTCGGCTGAACCAGTGACATCAACTGGACCTCAAATTCCAGCCATATCAGTTCATCAAAAAGAACCCACCACGACACCTACAGATGAGCTTCGAGGTCGCCAGAGTGTGTCAAACGACAGCATGAATAGCTCTCATTCGTTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACGCCAAAAACAACCAGCTCCGTCTCAACAGACTCAGGTGCAACACCACAACAACAGCTAGTGACGAAGCTGCAAACAAATAGGCAGCAGTCAATGAAGCAGGAATCGCCAGAGCATGAATCTCCATCTTCATCTCATGAATTCACGGCACCGCCTCCGGCCACAAACTCGGGTTCGGGCTGGTTTTCCTGCTTCTCGTGGTGTCGATGCCGGTGACGGGATCTCTGCTTGATGAATGTACTACTTGTTTTACGCTCCTAGCTAATTAGTTCTTTCAAATTGAAAGGAAGAAACACAAACAACATGAG

Coding sequence (CDS)

ATGGCCCATAAAGAAACCGATGTTATCCCTGATCGCCACAACTCCAATTCTTCATCTACCTCGGAGTCACGAGACTCAGCTCTTCAACCAAAACCAGATGTTTTCGAGTTTATGGGAGCTGTGCAAACAGCGGAGAATTTGTCTCTGGGTTCATGTAGAATCCAGAGTTCTTCTCAGATTCGATTATCGGGGGTGCTTGAAAACCATGATCCAAACCGAATACCTATATCGATCTTCTCTGGTAAACCTTCAAATCCTATGGAATGGAGCACTGCTTCGAATGAATCATTGTTCAGTATTCATGTGGGAAACAGCAGCTTTTCAAGGGAGAACTTCAATTTTTTTACCAAGTCTGGAGAATTGATGTTGAACCCCAATTCATCCCTGAATCTACCCAGCCTGCCCCCTCTTGTTGAACCACCAAGAGTTGAGAGTAAAACAGGAATCACAGTGAATGTCTCGGCTGAACCAGTGACATCAACTGGACCTCAAATTCCAGCCATATCAGTTCATCAAAAAGAACCCACCACGACACCTACAGATGAGCTTCGAGGTCGCCAGAGTGTGTCAAACGACAGCATGAATAGCTCTCATTCGTTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACGCCAAAAACAACCAGCTCCGTCTCAACAGACTCAGGTGCAACACCACAACAACAGCTAGTGACGAAGCTGCAAACAAATAGGCAGCAGTCAATGAAGCAGGAATCGCCAGAGCATGAATCTCCATCTTCATCTCATGAATTCACGGCACCGCCTCCGGCCACAAACTCGGGTTCGGGCTGGTTTTCCTGCTTCTCGTGGTGTCGATGCCGGTGA
Homology
[Close]
BLAST of CmoCh15G002420 vs. TrEMBL
Match: A0A0A0KXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 5.0e-86
Identity = 200/303 (66.01%), Postives = 225/303 (74.26%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSSTSE-SRDSA-----------LQPKPDVFEFMGAVQTAENLSLG 62
           HKETD I DR NSNSS TS+ S+DSA           LQ KPDV E +GAVQT EN  + 
Sbjct: 19  HKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVD 78

Query: 63  SC-RIQSSSQ----IRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNS 122
           S  RIQSSS+    IRLSG L NHDPNRIP+SIFSG+PSNP EWSTASNESLFSIHVGNS
Sbjct: 79  SLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNS 138

Query: 123 SFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVTSTGPQI 182
           SFSRE+FNFF KSGEL++NPN+S  L +LPP VEP R ESK+ I V   AEPVTS+    
Sbjct: 139 SFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAH 198

Query: 183 PA-------ISVHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTTSSV 242
           P        ++ H+KE TTT  DELRGRQSVSNDSMNSS SFQFPLLASEGATPKTTSSV
Sbjct: 199 PVSPTSSQNVADHKKEVTTT-MDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSV 258

Query: 243 STDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCFSWC 282
           STDSG T QQQ  +KLQ+ ++QS K + PE +S S +    +P PATNSGSGWFSC SWC
Sbjct: 259 STDSGVTSQQQ-PSKLQSKKRQSAKHQLPELQSSSQA---ASPSPATNSGSGWFSCLSWC 315

[Close]
BLAST of CmoCh15G002420 vs. TrEMBL
Match: A0A067JTI0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 89/243 (36.63%), Postives = 129/243 (53.09%), Query Frame = 1 

Query: 36  EFMGAVQTAENLSLGSCRIQSSSQIRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNE 95
           E  GA++ ++N +      +SS+  + +G    +DPNRIP +IF+GKP++PMEWS ASNE
Sbjct: 50  ESKGALEVSDNNNPKMSVQESSTTAQSAG---GYDPNRIPSAIFTGKPASPMEWSLASNE 109

Query: 96  SLFSIHVGNSSFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSA 155
           SLFSIH+GN+SF+R++     KSGEL      + + P++ P++E  R      +T     
Sbjct: 110 SLFSIHMGNNSFTRDHVYMLYKSGELPKPDEMNNSPPNMFPVME-TRKSGDLKMTEEKLT 169

Query: 156 EPVTSTGPQIPAISVHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTT 215
           EP   T  Q+P      KE + T   +    + V N S +S+ SFQFP+L    A    +
Sbjct: 170 EP-AKTETQLPG-----KEVSGTSKKKAPSAEDVRNSS-SSTQSFQFPVLE---ANVGGS 229

Query: 216 SSVSTDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCF 275
           +SV       P QQ         +Q  +QE  + ++P      T P PA NS   WFSCF
Sbjct: 230 ASVKVVMDKQPSQQ---------RQQQQQEEAQPQAPG-----TPPKPAGNS---WFSCF 261

Query: 276 SWC 279
           S C
Sbjct: 290 SCC 261

[Close]
BLAST of CmoCh15G002420 vs. TrEMBL
Match: M5XD52_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 4.9e-17
Identity = 70/173 (40.46%), Postives = 94/173 (54.34%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSSTSESRDSALQP----KPDVFEFMGAVQTAENLSLGSCRIQSSS 62
           ++     P   +S+SSSTS S  S+L+     K DV       Q  +         ++SS
Sbjct: 24  YRRNSSFPSSSSSSSSSTSSSPRSSLESDVTDKADVNGSFETTQQGQESQGPPPLPEASS 83

Query: 63  QIRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSRENFNFFTKS 122
              L+  L+ +DP+RIP SIF+ KPS  M+WS ASNESLFS+HVGN+SFSRE F+   KS
Sbjct: 84  SQTLAWSLQRYDPSRIPTSIFASKPSTGMDWSVASNESLFSLHVGNNSFSREQFSMLYKS 143

Query: 123 GELMLNPNSSLNLPS-LPPLVEPPRVESKTGITVNVSAEPVTSTGPQIPAISV 171
           GEL   P+    +P+ LP + E   VE K     NV  E V +  P +   SV
Sbjct: 144 GELTY-PDELFYIPTPLPTVTEAETVEMKIH---NVEKETVENKDPNVEKKSV 192

[Close]
BLAST of CmoCh15G002420 vs. TrEMBL
Match: A0A0D2VVL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048600 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.3e-14
Identity = 91/309 (29.45%), Postives = 137/309 (44.34%), Query Frame = 1 

Query: 13  HNSNSSSTSESRDSALQPKPDVFEFMGAVQTAENLSLGSCRIQSSSQIRLSGVLEN---- 72
           H S+ S +S    S+     D+F+F+G   + ++ + G   ++S  ++R+S         
Sbjct: 35  HGSSDSYSSSGSGSS----QDLFDFLGNNGSNDDHT-GKSELKSPKKVRVSFASSTDKQE 94

Query: 73  ---HDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSRENFNFFTKSGELMLNP 132
              + PNRIP S+FS KP+ PM+WSTASNESLFSIHVGN SFS++ F    KSGEL    
Sbjct: 95  KQVYVPNRIPSSVFSEKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGELTKLD 154

Query: 133 NSSLN----LPSLPPLVEPPRVESKTG---------ITVNVSAEPVTSTGPQIPAISVHQ 192
              +     LPSL  L +   ++  T             N  AE  + + P++    V  
Sbjct: 155 EQIIAQKNVLPSLKELDDMAAMDENTAKDSGNEATVAKTNEVAEDHSHSEPKMTEAEVQS 214

Query: 193 KEPTTTPTDELRGRQSVS--------------------NDSMNSSHSFQFPLL-ASEGAT 252
               +   D      ++S                    ++  N S SF FP+L A++G  
Sbjct: 215 SVDNSPIVDHSAAVGNLSLKKKPTAEVKNLPMNCMSSLSEDSNISISFTFPVLTATDGGR 274

Query: 253 PKTTSSVSTDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGW 281
             +  +     G+  QQQ + +   + ++    E  E +SP S        P   S   W
Sbjct: 275 LSSVYADQNIKGSHQQQQPLPQQPLDEEKKEFTEEKEAQSPVS--------PQNGSSRSW 330

[Close]
BLAST of CmoCh15G002420 vs. TrEMBL
Match: A0A0B0MFJ6_GOSAR (Valine--tRNA ligase OS=Gossypium arboreum GN=F383_03922 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.9e-14
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 1 

Query: 13  HNSNSSSTSESRDSALQPKPDVFEFMGAVQTAENLSLGSCRIQSSSQIRLSGVLEN---- 72
           H S+ S +S    S+     D+F+F+G   + ++ + G   ++S  ++R+S         
Sbjct: 35  HGSSDSYSSSGSGSS----QDLFDFLGNNDSNDDHT-GKSELKSPKKVRVSFASSTDKQE 94

Query: 73  ---HDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSRENFNFFTKSGEL 122
              + PNRIP S+FSGKP+ PM+WSTASNESLFSIHVGN SFS++ F    KSGEL
Sbjct: 95  KQVYVPNRIPSSVFSGKPATPMDWSTASNESLFSIHVGNGSFSKDQFFMLYKSGEL 145

[Close]
BLAST of CmoCh15G002420 vs. TAIR10
Match: AT2G03630.1 (AT2G03630.1 unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-14
Identity = 75/208 (36.06%), Postives = 103/208 (49.52%), Query Frame = 1 

Query: 15  SNSSSTSESRDSALQPKPDVFEFMGAVQTAENLSLGSCRIQSSSQIRLSGVLENHDPNRI 74
           S+SSS+S S  S L P  D+ E +   ++  +  + S  +Q   +         +DPNRI
Sbjct: 56  SSSSSSSSSSSSYLSPPKDLPEEV-LKESLNDPEISSPPVQVMDRDNNG----KYDPNRI 115

Query: 75  PISIFSGKPSN-PMEWSTASNESLFSIHVGNSSFSRENFNFFTKSGEL-----MLNPNSS 134
           P S+F    SN P EWS  SNESLFSIH+GN+SF+    +   KSGEL     +L  +  
Sbjct: 116 PSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFTGYGGDLM-KSGELYKSGELLAYSPG 175

Query: 135 LNLPSLP-----PLVEPPRV--ESKTGITVNVSAEPVTSTGPQIPAISVHQKE-----PT 194
           L +P +P     P+VE P+V    K    V V     +S+  +      H+KE       
Sbjct: 176 LPMPPVPGSEPKPVVEEPKVVESDKEEKVVLVEETHTSSSDEEEGKRESHEKEQHPAVSW 235

Query: 195 TTPTDELRGRQSVSNDSMNSSHSFQFPL 205
            TPT   R     SN S NS+HSF FP+
Sbjct: 236 KTPTTSYR-----SNRSSNSAHSFSFPM 252

[Close]
BLAST of CmoCh15G002420 vs. TAIR10
Match: AT3G02125.1 (AT3G02125.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-10
Identity = 57/162 (35.19%), Postives = 78/162 (48.15%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSS-TSESRDSALQ------PKPDVF----EFMGAVQTAENLSLGS 62
           H+  D +  R +S SSS TS S D          PKP +     + +     A N S+ S
Sbjct: 10  HQWKDSVSSRSSSRSSSITSASSDGHFDIRHFPLPKPSLSASEAQKLRESHQAYNSSVSS 69

Query: 63  CRIQSSSQIRLSGVLE--NHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSR 122
               S S    + +++   +DP RIP S+FS KP N  EWS ASNESLFSIH GN S S 
Sbjct: 70  YTSSSWSSNHQNHLIDLPGYDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGNFSIST 129

Query: 123 ----ENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKT 148
                    F ++  ++   NS   +P  PP+ +P   E +T
Sbjct: 130 ALRLAEIPRFEETVHVITEINS---VPLPPPVKKPNEYEKET 168

[Close]
BLAST of CmoCh15G002420 vs. TAIR10
Match: AT5G39200.1 (AT5G39200.1 unknown protein)

HSP 1 Score: 52.4 bits (124), Expect = 5.4e-07
Identity = 53/173 (30.64%), Postives = 81/173 (46.82%), Query Frame = 1 

Query: 69  HDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSRENFNFFTKSGEL-----ML 128
           ++P+RIP S+F+   +   EWS  SNESLFSIH+G+ SFS+       KSGEL       
Sbjct: 9   YEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK-----MYKSGELTNFEYTA 68

Query: 129 NPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVTSTGPQIPAISVHQKEPTTTPTDEL 188
           +P  S    ++   + P    +K    VN++   +  TGP+          P   P  ++
Sbjct: 69  SPYISYYNNNIDNKIAPTDAGTK---EVNIT---MVETGPKTGNRDGLTNVPKPDPRQQI 128

Query: 189 ---RGRQSVSNDSMNSSHSFQFPLLASEGATPKTTSSVSTDSGATPQQQLVTK 234
                +   S  S NS+ SF FP L       KT+ +  ++SG     +L +K
Sbjct: 129 PISPTKSCHSETSNNSTTSFAFPTLGEYQQERKTSLNTKSESGKRELSRLDSK 170

[Close]
BLAST of CmoCh15G002420 vs. NCBI nr
Match: gi|659118928|ref|XP_008459383.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 327.4 bits (838), Expect = 2.4e-86
Identity = 202/302 (66.89%), Postives = 225/302 (74.50%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSSTSE-SRDSA-----------LQPKPDVFEFMGAVQTAENLSLG 62
           HKETD I DR NS+SS TS+ S+DSA           LQ K DV E +GAVQT EN S G
Sbjct: 19  HKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSDVAEPLGAVQTVENQSAG 78

Query: 63  SC-RIQSSSQ----IRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNS 122
           S  RIQSSS+    IRLSG L NHDPNRIP+SIFSG+PSNPMEWSTASNESLFSIHVGN+
Sbjct: 79  SLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPMEWSTASNESLFSIHVGNN 138

Query: 123 SFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVT--STGP 182
           SFSRE+FNFF KSGEL++NPNSS  L +LPP VEP R +SK+ ITV  SA+PVT  ST P
Sbjct: 139 SFSREHFNFF-KSGELLMNPNSSQTLSNLPPFVEPLRADSKSEITVKTSADPVTSASTAP 198

Query: 183 QIPAISVH----QKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTTSSVS 242
            I   S H     K+  TT  DELRGRQSVSNDSMNSS SFQFPLLASEGATPKTTSSVS
Sbjct: 199 PISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSVS 258

Query: 243 TDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCFSWCR 282
           TDSGAT  QQ  +KLQ+ ++QS K + PE +S S +    A  PATNSGSGWFSC SWCR
Sbjct: 259 TDSGATSHQQ-PSKLQSKKRQSAKHQLPELQSSSQA----ASSPATNSGSGWFSCLSWCR 314

[Close]
BLAST of CmoCh15G002420 vs. NCBI nr
Match: gi|778707424|ref|XP_011656011.1| (PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 7.1e-86
Identity = 200/303 (66.01%), Postives = 225/303 (74.26%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSSTSE-SRDSA-----------LQPKPDVFEFMGAVQTAENLSLG 62
           HKETD I DR NSNSS TS+ S+DSA           LQ KPDV E +GAVQT EN  + 
Sbjct: 21  HKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVD 80

Query: 63  SC-RIQSSSQ----IRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNS 122
           S  RIQSSS+    IRLSG L NHDPNRIP+SIFSG+PSNP EWSTASNESLFSIHVGNS
Sbjct: 81  SLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNS 140

Query: 123 SFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVTSTGPQI 182
           SFSRE+FNFF KSGEL++NPN+S  L +LPP VEP R ESK+ I V   AEPVTS+    
Sbjct: 141 SFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAH 200

Query: 183 PA-------ISVHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTTSSV 242
           P        ++ H+KE TTT  DELRGRQSVSNDSMNSS SFQFPLLASEGATPKTTSSV
Sbjct: 201 PVSPTSSQNVADHKKEVTTT-MDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSV 260

Query: 243 STDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCFSWC 282
           STDSG T QQQ  +KLQ+ ++QS K + PE +S S +    +P PATNSGSGWFSC SWC
Sbjct: 261 STDSGVTSQQQ-PSKLQSKKRQSAKHQLPELQSSSQA---ASPSPATNSGSGWFSCLSWC 317

[Close]
BLAST of CmoCh15G002420 vs. NCBI nr
Match: gi|700197334|gb|KGN52511.1| (hypothetical protein Csa_5G639470 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 7.1e-86
Identity = 200/303 (66.01%), Postives = 225/303 (74.26%), Query Frame = 1 

Query: 3   HKETDVIPDRHNSNSSSTSE-SRDSA-----------LQPKPDVFEFMGAVQTAENLSLG 62
           HKETD I DR NSNSS TS+ S+DSA           LQ KPDV E +GAVQT EN  + 
Sbjct: 19  HKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVD 78

Query: 63  SC-RIQSSSQ----IRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNS 122
           S  RIQSSS+    IRLSG L NHDPNRIP+SIFSG+PSNP EWSTASNESLFSIHVGNS
Sbjct: 79  SLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNS 138

Query: 123 SFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVTSTGPQI 182
           SFSRE+FNFF KSGEL++NPN+S  L +LPP VEP R ESK+ I V   AEPVTS+    
Sbjct: 139 SFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAH 198

Query: 183 PA-------ISVHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTTSSV 242
           P        ++ H+KE TTT  DELRGRQSVSNDSMNSS SFQFPLLASEGATPKTTSSV
Sbjct: 199 PVSPTSSQNVADHKKEVTTT-MDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSV 258

Query: 243 STDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCFSWC 282
           STDSG T QQQ  +KLQ+ ++QS K + PE +S S +    +P PATNSGSGWFSC SWC
Sbjct: 259 STDSGVTSQQQ-PSKLQSKKRQSAKHQLPELQSSSQA---ASPSPATNSGSGWFSCLSWC 315

[Close]
BLAST of CmoCh15G002420 vs. NCBI nr
Match: gi|802716041|ref|XP_012084858.1| (PREDICTED: uncharacterized protein LOC105644194 [Jatropha curcas])

HSP 1 Score: 104.4 bits (259), Expect = 3.4e-19
Identity = 89/243 (36.63%), Postives = 129/243 (53.09%), Query Frame = 1 

Query: 36  EFMGAVQTAENLSLGSCRIQSSSQIRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNE 95
           E  GA++ ++N +      +SS+  + +G    +DPNRIP +IF+GKP++PMEWS ASNE
Sbjct: 50  ESKGALEVSDNNNPKMSVQESSTTAQSAG---GYDPNRIPSAIFTGKPASPMEWSLASNE 109

Query: 96  SLFSIHVGNSSFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSA 155
           SLFSIH+GN+SF+R++     KSGEL      + + P++ P++E  R      +T     
Sbjct: 110 SLFSIHMGNNSFTRDHVYMLYKSGELPKPDEMNNSPPNMFPVME-TRKSGDLKMTEEKLT 169

Query: 156 EPVTSTGPQIPAISVHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTT 215
           EP   T  Q+P      KE + T   +    + V N S +S+ SFQFP+L    A    +
Sbjct: 170 EP-AKTETQLPG-----KEVSGTSKKKAPSAEDVRNSS-SSTQSFQFPVLE---ANVGGS 229

Query: 216 SSVSTDSGATPQQQLVTKLQTNRQQSMKQESPEHESPSSSHEFTAPPPATNSGSGWFSCF 275
           +SV       P QQ         +Q  +QE  + ++P      T P PA NS   WFSCF
Sbjct: 230 ASVKVVMDKQPSQQ---------RQQQQQEEAQPQAPG-----TPPKPAGNS---WFSCF 261

Query: 276 SWC 279
           S C
Sbjct: 290 SCC 261

[Close]
BLAST of CmoCh15G002420 vs. NCBI nr
Match: gi|698536901|ref|XP_009764660.1| (PREDICTED: circumsporozoite protein [Nicotiana sylvestris])

HSP 1 Score: 103.2 bits (256), Expect = 7.5e-19
Identity = 95/273 (34.80%), Postives = 130/273 (47.62%), Query Frame = 1 

Query: 57  SSQIRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFSIHVGNSSFSRENFNFFT 116
           S  I   G    +DPNRIP S+FS KP+NPMEWSTASNESLFSIH+GN+SFSR+ FN   
Sbjct: 122 SPPIHTMGHPPGYDPNRIPSSVFSSKPNNPMEWSTASNESLFSIHMGNNSFSRDQFNMMY 181

Query: 117 KSGELM---------LNP---------NSSLNL-PSLP-PLVE---PPRVESKTGITVNV 176
           +SGEL           NP         N   +L P+LP PLVE      V+S + + V  
Sbjct: 182 RSGELTKPEEWSNSPANPYNAQPEVKSNEKKSLPPNLPLPLVEVATDKEVKSASVVEVPA 241

Query: 177 SAEPVTSTGPQIPAISVHQ--KEPTTTPTDELRGRQSVS--------------------- 236
             E +  + P+I  +  H+   +  T+  DE++   S                       
Sbjct: 242 MQEKIVES-PKIVFVENHENNSKEKTSNVDEVQHTASAPHKSDGNVVPPTEASHASSPRL 301

Query: 237 -NDSMNSSHSFQFPLLASEGATPKTTSSVSTDSGATPQQQLVTKLQTNRQQSMKQESPEH 281
            N+S NSS SF FP+L ++      T S+   S    + Q   + Q + Q  ++ +SP  
Sbjct: 302 SNESGNSSSSFAFPVLLNDAG---KTGSLKAPSAKMDRPQPQPQPQPDSQPEVQPQSPPR 361

The following BLAST results are available for this feature:
BLAST of CmoCh15G002420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh15G002420 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXK8_CUCSA5.0e-8666.01Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1[more]
A0A067JTI0_JATCU2.3e-1936.63Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1[more]
M5XD52_PRUPE4.9e-1740.46Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1[more]
A0A0D2VVL9_GOSRA2.3e-1429.45Uncharacterized protein OS=Gossypium raimondii GN=B456_012G048600 PE=4 SV=1[more]
A0A0B0MFJ6_GOSAR3.9e-1443.97Valine--tRNA ligase OS=Gossypium arboreum GN=F383_03922 PE=4 SV=1[more]
BLAST of CmoCh15G002420 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G03630.14.5e-1436.06 unknown protein[more]
AT3G02125.14.0e-1035.19 unknown protein[more]
AT5G39200.15.4e-0730.64 unknown protein[more]
BLAST of CmoCh15G002420 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118928|ref|XP_008459383.1|2.4e-8666.89PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|778707424|ref|XP_011656011.1|7.1e-8666.01PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus][more]
gi|700197334|gb|KGN52511.1|7.1e-8666.01hypothetical protein Csa_5G639470 [Cucumis sativus][more]
gi|802716041|ref|XP_012084858.1|3.4e-1936.63PREDICTED: uncharacterized protein LOC105644194 [Jatropha curcas][more]
gi|698536901|ref|XP_009764660.1|7.5e-1934.80PREDICTED: circumsporozoite protein [Nicotiana sylvestris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh15G002420.1CmoCh15G002420.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33673FAMILY NOT NAMEDcoord: 67..281
score: 1.2
NoneNo IPR availablePANTHERPTHR33673:SF3SUBFAMILY NOT NAMEDcoord: 67..281
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh15G002420Cucsa.157860Cucumber (Gy14) v1cgycmoB0440
CmoCh15G002420CmaCh15G002350Cucurbita maxima (Rimu)cmacmoB288
CmoCh15G002420Cla016519Watermelon (97103) v1cmowmB280
CmoCh15G002420Csa5G639470Cucumber (Chinese Long) v2cmocuB284
CmoCh15G002420MELO3C022033Melon (DHL92) v3.5.1cmomeB249
CmoCh15G002420MELO3C012154Melon (DHL92) v3.5.1cmomeB253
CmoCh15G002420ClCG11G004790Watermelon (Charleston Gray)cmowcgB239
CmoCh15G002420CSPI05G29370Wild cucumber (PI 183967)cmocpiB293
CmoCh15G002420Lsi03G001700Bottle gourd (USVL1VR-Ls)cmolsiB263
CmoCh15G002420Cp4.1LG13g08230Cucurbita pepo (Zucchini)cmocpeB268
CmoCh15G002420MELO3C022033.2Melon (DHL92) v3.6.1cmomedB281
CmoCh15G002420CsaV3_5G038510Cucumber (Chinese Long) v3cmocucB0343
CmoCh15G002420CsaV3_5G033340Cucumber (Chinese Long) v3cmocucB0354
CmoCh15G002420Cla97C11G211560Watermelon (97103) v2cmowmbB277
CmoCh15G002420Bhi06G000278Wax gourdcmowgoB0379
CmoCh15G002420CsGy5G028830Cucumber (Gy14) v2cgybcmoB578
CmoCh15G002420Carg02214Silver-seed gourdcarcmoB0362
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh15G002420Wax gourdcmowgoB0374
CmoCh15G002420Cucurbita moschata (Rifu)cmocmoB246
CmoCh15G002420Cucurbita moschata (Rifu)cmocmoB261
CmoCh15G002420Cucumber (Gy14) v1cgycmoB0439
CmoCh15G002420Cucurbita maxima (Rimu)cmacmoB287
CmoCh15G002420Cucurbita maxima (Rimu)cmacmoB692
CmoCh15G002420Wild cucumber (PI 183967)cmocpiB270
CmoCh15G002420Wild cucumber (PI 183967)cmocpiB296
CmoCh15G002420Cucumber (Chinese Long) v2cmocuB287
CmoCh15G002420Melon (DHL92) v3.5.1cmomeB239
CmoCh15G002420Melon (DHL92) v3.5.1cmomeB256
CmoCh15G002420Watermelon (Charleston Gray)cmowcgB240
CmoCh15G002420Watermelon (Charleston Gray)cmowcgB251
CmoCh15G002420Watermelon (97103) v1cmowmB271
CmoCh15G002420Watermelon (97103) v1cmowmB275
CmoCh15G002420Cucurbita pepo (Zucchini)cmocpeB279
CmoCh15G002420Bottle gourd (USVL1VR-Ls)cmolsiB265
CmoCh15G002420Cucumber (Gy14) v2cgybcmoB584
CmoCh15G002420Melon (DHL92) v3.6.1cmomedB271
CmoCh15G002420Silver-seed gourdcarcmoB0031
CmoCh15G002420Cucumber (Chinese Long) v3cmocucB0320
CmoCh15G002420Cucumber (Chinese Long) v3cmocucB0348
CmoCh15G002420Watermelon (97103) v2cmowmbB278