CsaV3_5G038510 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTGAATTTGTAGCTTTAGGTCGATGATAAGTCAGCTAGAGAGTTTCAACGTTGTGATCGATTGATTGATTTAGCTATGTTTCAACTGAATCTTCCATTGATTTTGGAAACAGATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAAGCAATCCTATATCATATGTCTATTTTGGAGATGTTTTCATAATTTTGAGCTTGGAATCTAAAACATTAAGGCTATAAATTGTGTCTTCTTTTATCAGATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGTAACATCACAACAACAGCCATCAAAGCTGCAATCGAAAAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCCGCCTCACCATCTCCAGCCACGAATTCAGGTTCGGGATGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTCTACTTGTTCTACTCACATCATCACAGAGAAAAGCTACAGGAGATGGTAACTTTACACTCTAGCTAATTAGTTCTCTCTAAATGAAAAGAAAAACAGAGAAAAAGAACAAGGGCTCCAATTGATCGACCTCCTTAAGAGTTATAGCAGAAGAATTAGTCATTATTGTAACAATCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTCGACTTCTCCATTCTCTAGATAAATAATGAAATCGAATGTTTGATTTATTCTCTCTGGCTTTGATTAAAACTACTAATTTATTATACCTCAAACTTATCTTCATCAAAACCTTGACTTGTTAACATCTGTTTATATATAATACATAAACTTTTCATTTATGACAGTTCCTGAAAGAACATTTGCTTAGAAAGGTTGATACATTTCTTCATATTTGTCATAAATTTTGTTGATATACTGCAGAGTTTATACAAAAGGAAATCAAGAGTTCAATTCTCATTCCCTTTGAGAGTTGAGAATTGTGGTTTCACAGATTTCACACTAATATAAAATTTTATTAGTGTCTATGGTTTGACATTGATTTAATAGGTTGGTTAATAATTTACCTAAAATTTTTTAAAAAAGTATCATTTCAAATATAATAAATATTTTATTTTTATATTTTTTACCATTCTCAAGAAAAAGAAAAACACACACACAAAAACACAAAATAAAGAGCTAAAGAGTCTTGAGACCATCGGAGAAAATGGAAGCAAAACAGAGCATTTCCGGTTGAGAAAGCACCAAATTCACTTCAATCCCGTCTCCATCTCTTCCATCCGCCAGTGAAATTGAACCAGTCCTCTCAATCGAAACCATCTTCACATTTTCCGGTCTTCCCCACCCGAAATCCAACTCGTAAACCCCTAATCTCGGCGATCCAACCACTCCCACAAACTTAATCCCCCCTTCCACCTTCTCCCATTTCGACAAACTTTCCTCCGCCCCCTTTGTCACATTCTCATCCAAACCCTTTATCGCTTCATCAATCCTCTTCGATGCAATCCCCAGCCCCTTTTCCTCATCCTCCAGTTCTCCCACTTCCGCATAAACCCCATGGCTTCCACCGCAGTTCCCGAAGTAGTTCGCTGGTACTGCTGGATCCAGTCGAGCTCGCCAATCGGCGTAGAAACCCAGGTACACTCTCTTCTTCTTCTGTTCTGTTCTCGCTGATTTTACTGCACAAATCGATATGTACGCGAATGCGAGAACGAACGATGAGTATCGGGTCGGTTTCGAGGGTTTTGATTCATCTTCTTTTGTTGTTGCTTTCCTGAGATTTTCGATGTCTGTACGTGTGAATTTGAATGTGCCTCTTACCATTTCTGGGGAAACACCCAAATTTGGGAAATATTTCAGGCTTTTGATTGATGGGTCAGTGGGGTTGGTCTTTTTTAGCCAGTAGTTGATGTAGAGCATGTCGATTCCTTTCGGGTCTTTGATAATAGACCGATCGAAAAATGGGGTTAGATCAGGCGGAAGAGCAATGGAGAATTCGGGTTTGTTTGGTGTCTGCTTGAAAATGTAAGCCCACGATTTCAAAAACATAATCGAGCTTTTCCCATCAACAAAAGCATGGTGATTGGATATGCCAATGGATAATCCCCTGTTTTGGAACAGAGTGATTTGCAGAGCCATAACCGGAACAGAATCATCCGCTGCCGGCAATTCCGGGACAAAGGGACGGCACTCTTCCACAGGACGGATTCCAGTTCCGGAAAAGTGGGTAAAGTCGGCATCAGTCTCAACAACGGTGAGGGAAACGCCATCACCAGGGGAGTAACGAACGATTGGTTTGGGAGATTCCGGCGGCCAGACGAGGTTTCCGGCGAGAGGGAGGAAGTGTTGGAGAGTAAGAGAAAGGGAATGCTTGAGATGTGTGAGGAGGGAATTAGAGTCGAACAATGGCGGGTCTGGTAAAGAGTAGAAGAAGAGTCGTTCTGTGGGAGGGATTTTTAAAAACAGAGCATCGAAGTAAGTAAAAGGAAGAGAGAAATGGGTAGCGGAGGAAGGAGAAGCAGGCGGCGGAGCCACTGTAGACACTTCCAAAACACTGATCAGGTTTGGTTTCAGTTTCTCCATACTATGAGATGGGAGAGTTTTAATTTGAAGTTGGAATTGATAGCAATCCTTTCTGATTCAGAATTATTTATAGAAATTTATGATTGAAGAAAGGAAGGATTGATTGTTGTGTTTCACGTGGTAATGGAAATTGGATTCATTGTTATATGATGTGAGAAAGAGAATTCAAACACAATCGTCCTTTAAACCTATGTTCTCTTTTATATTTTGCATCAACGTGAATCACGACGTAGTGGGAGATTTTTGTATAGACTCCGTTTTG ATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGTAACATCACAACAACAGCCATCAAAGCTGCAATCGAAAAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCCGCCTCACCATCTCCAGCCACGAATTCAGGTTCGGGATGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGA ATGCCAATGGATACTACACAGAGTTTTAAGGAATCTAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAATTCTTCATGTACCTCAGATTTGTCACAAGACTCGGCGGTTAGCAGCATTTTCCAGAGTGATCCTCCTGTTCTTCAATCAAAACCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACAGTGGAGAATCAACCTGTGGATTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGGCCGCTTGGAAACCACGATCCGAATAGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTACGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAGTAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATGCATCCCAGACTCTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGAGAGTAAATCTGAAATCGCGGTGAAGACATTCGCCGAACCAGTGACGTCGTCGTCAACTGCACATCCGGTTTCACCCACATCAAGTCAAAATGTAGCAGATCATAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGCCAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGTAACATCACAACAACAGCCATCAAAGCTGCAATCGAAAAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCCGCCTCACCATCTCCAGCCACGAATTCAGGTTCGGGATGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGA MPMDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKPDVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPTEWSTASNESLFSIHVGNSSFSREHFNFFKSGELLMNPNASQTLSNLPPFVEPLRAESKSEIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQSAKHQLPELQSSSQAASPSPATNSGSGWFSCLSWCRCR
BLAST of CsaV3_5G038510 vs. NCBI nr
Match: XP_011656011.1 (PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus]) HSP 1 Score: 539.7 bits (1389), Expect = 6.9e-150 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. NCBI nr
Match: KGN52511.1 (hypothetical protein Csa_5G639470 [Cucumis sativus]) HSP 1 Score: 535.0 bits (1377), Expect = 1.7e-148 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. NCBI nr
Match: XP_008459383.1 (PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo] >XP_016902402.1 PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo]) HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125 Identity = 280/315 (88.89%), Postives = 289/315 (91.75%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. NCBI nr
Match: XP_022133869.1 (uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133870.1 uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133871.1 uncharacterized protein LOC111006315 [Momordica charantia]) HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80 Identity = 209/317 (65.93%), Postives = 233/317 (73.50%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. NCBI nr
Match: XP_022993653.1 (uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima] >XP_022993654.1 uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima] >XP_022993656.1 uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima]) HSP 1 Score: 308.1 bits (788), Expect = 3.4e-80 Identity = 208/321 (64.80%), Postives = 230/321 (71.65%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TAIR10
Match: AT3G02125.1 (unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 4.5e-10 Identity = 68/214 (31.78%), Postives = 86/214 (40.19%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TAIR10
Match: AT2G03630.1 (unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TAIR10
Match: AT5G39200.1 (unknown protein) HSP 1 Score: 50.8 bits (120), Expect = 1.8e-06 Identity = 48/163 (29.45%), Postives = 75/163 (46.01%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TAIR10
Match: AT1G74220.1 (unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06 Identity = 53/171 (30.99%), Postives = 75/171 (43.86%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TrEMBL
Match: tr|A0A0A0KXK8|A0A0A0KXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 1.1e-148 Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TrEMBL
Match: tr|A0A1S4E2F1|A0A1S4E2F1_CUCME (uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 1.7e-125 Identity = 280/315 (88.89%), Postives = 289/315 (91.75%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TrEMBL
Match: tr|A5C6V8|A5C6V8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_038105 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.9e-16 Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TrEMBL
Match: tr|A0A2P5DJZ8|A0A2P5DJZ8_9ROSA (Pinin-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_248790 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.9e-15 Identity = 68/160 (42.50%), Postives = 91/160 (56.88%), Query Frame = 0
BLAST of CsaV3_5G038510 vs. TrEMBL
Match: tr|A0A2R6RYK2|A0A2R6RYK2_ACTCH (RNA-binding protein with serine-rich domain like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02304 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.5e-15 Identity = 69/163 (42.33%), Postives = 90/163 (55.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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