Carg05882 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg05882
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pinin-like protein
Location	Cucurbita_argyrosperma_scaffold_026 : 53262 .. 54463 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCAACCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCGTTTCAGTTCCCTCTGTAAGTAATCCTACATCATAGACATAATACTTGAAATCTGAAGCTGAAACTGAGACATTGTGGCTGTGAATTCTGTGCTTTTTGTTTGATCAGATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGATGATGACGACAACGACAAATCTACTACTTGTTCTACTCACATCTCGTCCTATTCAGCTCAGAGAAGCTTCAGCAGGAGGTGCTAACTTTACACTATAGCTAATTAGTTCTCTCAAATGGGAAGAACATGGACTGATCCTACAAAGGGGAATCAGTTATCACTGTAATAAACTTTTTTCTTTTTGTTTTGTTTTCAAGTTCTTCATCTGAAGCTGCATTCGAATAGTGAAA

mRNA sequence

ATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCAACCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCGTTTCAGTTCCCTCTATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGATGATGACGACAACGACAAATCTACTACTTGTTCTACTCACATCTCGTCCTATTCAGCTCAGAGAAGCTTCAGCAGGAGGTGCTAACTTTACACTATAGCTAATTAGTTCTCTCAAATGGGAAGAACATGGACTGATCCTACAAAGGGGAATCAGTTATCACTGTAATAAACTTTTTTCTTTTTGTTTTGTTTTCAAGTTCTTCATCTGAAGCTGCATTCGAATAGTGAAA

Coding sequence (CDS)

ATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCAACCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCGTTTCAGTTCCCTCTATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGA

Protein sequence

MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLDADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR

Homology

[Close]

BLAST of Carg05882 vs. NCBI nr
Match: XP_022962469.1 (uncharacterized protein LOC111462894 [Cucurbita moschata] >XP_022962478.1 uncharacterized protein LOC111462894 [Cucurbita moschata])

HSP 1 Score: 558.9 bits (1439), Expect = 1.0e-155
Identity = 291/292 (99.66%), Postives = 291/292 (99.66%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD 60
           MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD
Sbjct: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD 60

Query: 61  ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120
           ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN
Sbjct: 61  ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120

Query: 121 NSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQ 180
           NSFSREQFNFYTKSGELTNNTNS QNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQ
Sbjct: 121 NSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQ 180

Query: 181 IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240
           IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST
Sbjct: 181 IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240

Query: 241 DSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR 293
           DSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR
Sbjct: 241 DSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR 292

[Close]

BLAST of Carg05882 vs. NCBI nr
Match: XP_023551219.1 (uncharacterized protein LOC111809101 [Cucurbita pepo subsp. pepo] >XP_023551228.1 uncharacterized protein LOC111809101 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546.6 bits (1407), Expect = 5.2e-152
Identity = 286/293 (97.61%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD 60
           MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD
Sbjct: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD 60

Query: 61  ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120
           A+STRI SSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN
Sbjct: 61  AESTRIQSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120

Query: 121 NSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQ 180
           NSFSREQFNFYTKSGELTNNTNS QNLSSSPPF+DPARVESKTEIVVNVFPEQAASTGAQ
Sbjct: 121 NSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFIDPARVESKTEIVVNVFPEQAASTGAQ 180

Query: 181 IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240
           IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST
Sbjct: 181 IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240

Query: 241 DSCTQQKQHQPGTKSTKL-SLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR 293
           DSCTQQKQHQPGTKSTKL SL+HQS SNETTSSSRTMNFGSGWFSCLSWCRCR
Sbjct: 241 DSCTQQKQHQPGTKSTKLQSLDHQSVSNETTSSSRTMNFGSGWFSCLSWCRCR 293

[Close]

BLAST of Carg05882 vs. NCBI nr
Match: XP_022991006.1 (uncharacterized protein LOC111487727 [Cucurbita maxima] >XP_022991008.1 uncharacterized protein LOC111487727 [Cucurbita maxima])

HSP 1 Score: 542.3 bits (1396), Expect = 9.8e-151
Identity = 285/293 (97.27%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLD 60
           MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSS TSDLSRDSAVSSIFQIDSPLQPKLD
Sbjct: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSPTSDLSRDSAVSSIFQIDSPLQPKLD 60

Query: 61  ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120
           A+STRI SSSRGSPQI+LSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN
Sbjct: 61  AESTRIQSSSRGSPQIQLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGN 120

Query: 121 NSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQ 180
           NSFSREQFNFYTKSGELTNNTNS QNLSSSPPFVDPAR ESKTEIVVNVFPEQAASTGAQ
Sbjct: 121 NSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARGESKTEIVVNVFPEQAASTGAQ 180

Query: 181 IPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240
           IPAISTQSVTNRRKE+IISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST
Sbjct: 181 IPAISTQSVTNRRKEIIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVST 240

Query: 241 DSCTQQKQHQPGTKSTKL-SLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR 293
           DSCTQQKQHQPGTKSTKL SLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR
Sbjct: 241 DSCTQQKQHQPGTKSTKLQSLEHQSASNETTSSSRTMNFGSGWFSCLSWCRCR 293

[Close]

BLAST of Carg05882 vs. NCBI nr
Match: XP_022993653.1 (uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima] >XP_022993654.1 uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima] >XP_022993656.1 uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 2.2e-70
Identity = 177/307 (57.65%), Postives = 201/307 (65.47%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVS---SIFQIDSPLQ- 60
           MDC++S + SK QLEM H E D  I +RS+SN S TS+LSRDSA+     +F+    +Q 
Sbjct: 1   MDCAQSNKQSKEQLEMAHKETD-VIPDRSNSNCSSTSELSRDSALQPKPDVFEFMGAVQT 60

Query: 61  -PKLDADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFS 120
              L   S RI SSS    QIRLSGVLENHDPNRIP+SIFS KPS+PMEWSTASNESLFS
Sbjct: 61  AENLSLGSCRIQSSS----QIRLSGVLENHDPNRIPISIFSGKPSNPMEWSTASNESLFS 120

Query: 121 IHVGNNSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAA 180
           IHVGNNSFSRE FNF+TKSGEL  N NS+ NL S PP V+P RVESKT I VNV  E   
Sbjct: 121 IHVGNNSFSRENFNFFTKSGELMLNPNSSLNLPSLPPLVEPPRVESKTGITVNVSAEPVT 180

Query: 181 STGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSN 240
           STG QIPAIS     ++++      D+ R R S SNDSMNSS SFQFPLL  EGATPK+ 
Sbjct: 181 STGPQIPAIS----VHQKEPTTTPTDELRGRQSVSNDSMNSSHSFQFPLLASEGATPKTT 240

Query: 241 RSVSTDSCTQQKQHQPGTK-STK---------LSLEHQSASNETTSSSRTMNFGSGWFSC 293
            SVSTDS    +Q QP TK  TK                     T+ S   N GSGWFSC
Sbjct: 241 SSVSTDSGATPQQ-QPVTKLQTKRQXXXXXXXXXXXXXXXXXXXTAPSPATNSGSGWFSC 297

[Close]

BLAST of Carg05882 vs. NCBI nr
Match: KGN52511.1 (hypothetical protein Csa_5G639470 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 1.1e-69
Identity = 172/316 (54.43%), Postives = 207/316 (65.51%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+SNSS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 61  D---------------ADS-TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                DS +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+P 
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGN+SFSRE FNF+ KSGEL  N N++Q LS+ PPFV+P R ESK+
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKS 180

Query: 181 EIVVNVF--PEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  F  P  ++ST   +   S+Q+V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSVSTD-----SCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTM 293
           FPLL  EGATPK+  SVSTD                             S++  S S   
Sbjct: 241 FPLLASEGATPKTTSSVSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQAASPSPAT 300

[Close]

BLAST of Carg05882 vs. TAIR10
Match: AT2G03630.1 (unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08
Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 0


Query: 85  HDPNRIPLSIFS-SKPSSPMEWSTASNESLFSIHVGNNSFS 125
           +DPNRIP S+F  SK + P EWS  SNESLFSIH+GNNSF+
Sbjct: 105 YDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSFT 145

[Close]

BLAST of Carg05882 vs. TAIR10
Match: AT3G02125.1 (unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 57/187 (30.48%), Postives = 76/187 (40.64%), Query Frame = 0


Query: 82  LENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSRE-QFNFYTKSGELTNN 141
           L  +DP RIP S+FSSKP +  EWS ASNESLFSIH GN S S   +     +  E  + 
Sbjct: 86  LPGYDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGNFSISTALRLAEIPRFEETVHV 145

Query: 142 TNSTQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQI------------------- 201
                ++   PP   P   E +T  +    P Q  ++ + I                   
Sbjct: 146 ITEINSVPLPPPVKKPNEYEKET--IAEKEPYQVENSNSDIEXXXXXXXXXXXXXXXXXX 205

Query: 202 --PAISTQSVTNRRKEVIISVDDHRSRPS------------ESNDSMNSSRSFQFPLLGG 235
                         KEVI +V +++   S             S+ S NS  SF FPLL  
Sbjct: 206 XXXXXXXXXXXXXXKEVIETVKENKPEDSNSIVSHSPSISCRSDTSNNSIGSFAFPLLQK 265

[Close]

BLAST of Carg05882 vs. TAIR10
Match: AT5G39200.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06
Identity = 60/210 (28.57%), Postives = 98/210 (46.67%), Query Frame = 0


Query: 85  HDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTN-NTNS 144
           ++P+RIP S+F++  +   EWS  SNESLFSIH+G++SFS+       KSGELTN    +
Sbjct: 9   YEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK-----MYKSGELTNFEYTA 68

Query: 145 TQNLSSSPPFVDP--ARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTNRRKEVIISVD 204
           +  +S     +D   A  ++ T+ V     E    TG +   ++     + R+++ IS  
Sbjct: 69  SPYISYYNNNIDNKIAPTDAGTKEVNITMVETGPKTGNR-DGLTNVPKPDPRQQIPIS-- 128

Query: 205 DHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQHQPGTKSTKLSLE 264
              ++   S  S NS+ SF FP LG      +  R  S ++ ++  + +     +K  L 
Sbjct: 129 --PTKSCHSETSNNSTTSFAFPTLG----EYQQERKTSLNTKSESGKRELSRLDSKTGLY 188

Query: 265 HQSASNETTSSSRTMNFGSGWFSCLSWCRC 292
              +      +        GW SC   C C
Sbjct: 189 PDDSKQGGAGAG-----AGGWLSC---CLC 196

[Close]

BLAST of Carg05882 vs. TAIR10
Match: AT1G74220.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 66/235 (28.09%), Postives = 94/235 (40.00%), Query Frame = 0


Query: 87  PNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELT-------- 146
           P RIP  +F+   S+  EWST SNESLFSIH+GNNSF+      Y KSGELT        
Sbjct: 87  PYRIPSHVFARTTSTAPEWSTISNESLFSIHMGNNSFTGGD---YFKSGELTFPQPPSPI 146

Query: 147 ------------NNTNSTQNLSSSPPFVDPARVESKTEIVVNVF-----PEQAASTGAQI 206
                       +N N    + ++     P  +  K       +      EQ A+   + 
Sbjct: 147 TXXXXXXXXXXPHNVNQGGAVGAAAEVKTPVDIGKKAAETDKAYRASKEDEQKAAASIRE 206

Query: 207 PAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQFPLLGG------EGATP-KS 266
             ++ ++  N  K     +D   SR SE+     S +SF FP++G       +G+TP K 
Sbjct: 207 VIMANEAANNNNK--TNKLDRSVSRRSEN----LSVKSFAFPVMGNADKGGLQGSTPEKK 266

Query: 267 NRSVSTDSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWC 290
            R+ S     +      G    K   E        T + R  +    W SC   C
Sbjct: 267 QRNPSQPETPKISTEAEGDVGLKKE-EAPKPVAPKTEADRASDRNPKWLSCFPCC 311

[Close]

BLAST of Carg05882 vs. TrEMBL
Match: tr|A0A0A0KXK8|A0A0A0KXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.3e-70
Identity = 172/316 (54.43%), Postives = 207/316 (65.51%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+SNSS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 61  D---------------ADS-TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                DS +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+P 
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGN+SFSRE FNF+ KSGEL  N N++Q LS+ PPFV+P R ESK+
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKS 180

Query: 181 EIVVNVF--PEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  F  P  ++ST   +   S+Q+V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSVSTD-----SCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTM 293
           FPLL  EGATPK+  SVSTD                             S++  S S   
Sbjct: 241 FPLLASEGATPKTTSSVSTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSQAASPSPAT 300

[Close]

BLAST of Carg05882 vs. TrEMBL
Match: tr|A0A1S4E2F1|A0A1S4E2F1_CUCME (uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 9.2e-65
Identity = 164/315 (52.06%), Postives = 196/315 (62.22%), Query Frame = 0


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+S+SS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60

Query: 61  D----------------ADSTRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                   +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+PM
Sbjct: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSTQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGNNSFSRE FNF+ KSGEL  N NS+Q LS+ PPFV+P R +SK+
Sbjct: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSNLPPFVEPLRADSKS 180

Query: 181 EIVV--NVFPEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  +  P  +AST   I   S+ +V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSV----STDSCTQQKQHQPGTKSTKLSLEHQSASNETTSSSRTMN 293
           FPLL  EGATPK+  SV                                           
Sbjct: 241 FPLLASEGATPKTTSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

[Close]

BLAST of Carg05882 vs. TrEMBL
Match: tr|A0A1U7VRY3|A0A1U7VRY3_NICSY (circumsporozoite protein OS=Nicotiana sylvestris OX=4096 GN=LOC104216340 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.3e-18
Identity = 77/195 (39.49%), Postives = 100/195 (51.28%), Query Frame = 0


Query: 73  SPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYT 132
           SP I   G    +DPNRIP S+FSSKP++PMEWSTASNESLFSIH+GNNSFSR+QFN   
Sbjct: 122 SPPIHTMGHPPGYDPNRIPSSVFSSKPNNPMEWSTASNESLFSIHMGNNSFSRDQFNMMY 181

Query: 133 KSGELTNN---TNSTQNLSSSPPFVDPARVESKTE------IVVNVFPEQAASTGAQIPA 192
           +SGELT     +NS  N  ++ P V     +S         + V    E  +++  ++PA
Sbjct: 182 RSGELTKPEEWSNSPANPYNAQPEVKSNEKKSLPPNLPLPLVEVATDKEVKSASVVEVPA 241

Query: 193 ISTQSV-----------TNRRKEVIISVDD----------------------HRSRPSES 226
           +  + V            N  KE   +VD+                      H S P  S
Sbjct: 242 MQEKIVESPKIVFVENHENNSKEKTSNVDEVQHTASAPHKSDGNVVPPTEASHASSPRLS 301

[Close]

BLAST of Carg05882 vs. TrEMBL
Match: tr|A0A1J6IM80|A0A1J6IM80_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_10747 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.8e-18
Identity = 78/195 (40.00%), Postives = 95/195 (48.72%), Query Frame = 0


Query: 73  SPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYT 132
           SP I   G    +DPNRIP S+FSSKP++PMEWSTASNESLFSIH+GNNSFSR+QFN   
Sbjct: 122 SPPIHTMGHPPGYDPNRIPSSVFSSKPNNPMEWSTASNESLFSIHMGNNSFSRDQFNMMY 181

Query: 133 KSGELTNN---TNSTQN------------LSSSPPFVDPARVESKTEIVVNVF-----PE 192
           +SGELT     +NS  N              S PP +    VE  T+  V        P 
Sbjct: 182 RSGELTKPEEWSNSPANPYNAQPEVKSNEKKSLPPNLPLPLVEVATDKEVKSASVVEGPA 241

Query: 193 QAASTGAQIPAISTQSVTNRRKEVIISVDD----------------------HRSRPSES 226
                      +S ++  N  KE   +VD+                      H S P  S
Sbjct: 242 MQEKIAESPKIVSVENHENNIKEKTSNVDEVQHTASAPHKSDGKVVPPTEASHASSPRLS 301

[Close]

BLAST of Carg05882 vs. TrEMBL
Match: tr|A0A1S3YZC0|A0A1S3YZC0_TOBAC (proline-rich receptor-like protein kinase PERK14 OS=Nicotiana tabacum OX=4097 GN=LOC107781289 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 8.5e-18
Identity = 103/308 (33.44%), Postives = 135/308 (43.83%), Query Frame = 0


Query: 6   SFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLDADSTR 65
           S E S ++L     +P G ++ +S  +SS    LS   A SS     SP  P      + 
Sbjct: 45  SSEDSILELSTSRKDPLGDLYTKSEKDSS----LSPSPASSS-----SPDVPSQTPQWSM 104

Query: 66  IHSSSRG--------------------SPQIRLSGVLENHDPNRIPLSIFSSKPSSPMEW 125
           I +S RG                    SP I   G    +DPNRIP S+FSSKP++PMEW
Sbjct: 105 ISASPRGEMEAPPFPDEWNGANPSPMKSPPIHTMGHPPGYDPNRIPSSVFSSKPTNPMEW 164

Query: 126 STASNESLFSIHVGNNSFSREQFNFYTKSGELTNN---TNSTQN------------LSSS 185
           STASNESLFSIH+GNNSFSR+QFN   +SGELT     +NS  N              S 
Sbjct: 165 STASNESLFSIHMGNNSFSRDQFNMMYRSGELTKPEEWSNSPANPYNAQPEVKSNEKKSL 224

Query: 186 PPFVDPARVESKTEIVVNVF-----PEQAASTGAQIPAISTQSVTNRRKEVIISVDD--- 245
           PP +    VE  T+  V        P            +  ++  N  K+   +VDD   
Sbjct: 225 PPNLPLPLVEMATDREVKSASVVEGPAMQEKIVESPKIVPVENHENNIKDKTSNVDDVQH 284

Query: 246 -------------------HRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSC 252
                              H S P  SN+S NSS SF FP+L  +     S ++ S    
Sbjct: 285 SASAPNKSDDKAVPPTEASHASSPRLSNESGNSSSSFAFPVLLNDAGKTGSLKAAS---- 339

The following BLAST results are available for this feature:

BLAST of Carg05882 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962469.1	1.0e-155	99.66	uncharacterized protein LOC111462894 [Cucurbita moschata] >XP_022962478.1 unchar...	[more]
XP_023551219.1	5.2e-152	97.61	uncharacterized protein LOC111809101 [Cucurbita pepo subsp. pepo] >XP_023551228....	[more]
XP_022991006.1	9.8e-151	97.27	uncharacterized protein LOC111487727 [Cucurbita maxima] >XP_022991008.1 uncharac...	[more]
XP_022993653.1	2.2e-70	57.65	uncharacterized protein LOC111489581 isoform X1 [Cucurbita maxima] >XP_022993654...	[more]
KGN52511.1	1.1e-69	54.43	hypothetical protein Csa_5G639470 [Cucumis sativus]	[more]

BLAST of Carg05882 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03630.1	1.7e-08	68.29	unknown protein	[more]
AT3G02125.1	1.1e-07	30.48	unknown protein	[more]
AT5G39200.1	2.1e-06	28.57	unknown protein	[more]
AT1G74220.1	2.8e-06	28.09	unknown protein	[more]

BLAST of Carg05882 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg05882 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KXK8\|A0A0A0KXK8_CUCSA	7.3e-70	54.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1	[more]
tr\|A0A1S4E2F1\|A0A1S4E2F1_CUCME	9.2e-65	52.06	uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=...	[more]
tr\|A0A1U7VRY3\|A0A1U7VRY3_NICSY	1.3e-18	39.49	circumsporozoite protein OS=Nicotiana sylvestris OX=4096 GN=LOC104216340 PE=4 SV...	[more]
tr\|A0A1J6IM80\|A0A1J6IM80_NICAT	3.8e-18	40.00	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_10747 PE=4 SV=1	[more]
tr\|A0A1S3YZC0\|A0A1S3YZC0_TOBAC	8.5e-18	33.44	proline-rich receptor-like protein kinase PERK14 OS=Nicotiana tabacum OX=4097 GN...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05882-RA	Carg05882-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..274
None	No IPR available	PANTHER	PTHR33673:SF3	SUBFAMILY NOT NAMED	coord: 3..291
None	No IPR available	PANTHER	PTHR33673	FAMILY NOT NAMED	coord: 3..291

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg05882	Cla016519	Watermelon (97103) v1	carwmB0025
Carg05882	Csa5G639470	Cucumber (Chinese Long) v2	carcuB0021
Carg05882	MELO3C022033	Melon (DHL92) v3.5.1	carmeB0018
Carg05882	ClCG11G004790	Watermelon (Charleston Gray)	carwcgB0019
Carg05882	CSPI05G29370	Wild cucumber (PI 183967)	carcpiB0022
Carg05882	Cucsa.157860	Cucumber (Gy14) v1	carcgyB0021
Carg05882	CmaCh15G002350	Cucurbita maxima (Rimu)	carcmaB0030
Carg05882	CmaCh04G028000	Cucurbita maxima (Rimu)	carcmaB0033
Carg05882	CmoCh04G029320	Cucurbita moschata (Rifu)	carcmoB0033
Carg05882	Lsi03G001700	Bottle gourd (USVL1VR-Ls)	carlsiB017
Carg05882	Cp4.1LG01g22560	Cucurbita pepo (Zucchini)	carcpeB0034
Carg05882	CsGy5G028830	Cucumber (Gy14) v2	carcgybB0021
Carg05882	MELO3C022033.2	Melon (DHL92) v3.6.1	carmedB0019
Carg05882	CsaV3_5G038510	Cucumber (Chinese Long) v3	carcucB0022
Carg05882	Cla97C11G211560	Watermelon (97103) v2	carwmbB0015
Carg05882	Bhi06G000278	Wax gourd	carwgoB0020

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg05882	Carg02214	Silver-seed gourd	carcarB019

The following block(s) are covering this gene:


Gene	Organism	Block
Carg05882	Silver-seed gourd	carcarB020
Carg05882	Cucurbita moschata (Rifu)	carcmoB0031
Carg05882	Cucurbita pepo (Zucchini)	carcpeB0031