CmoCh04G029320 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G029320
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Assimilatory nitrate reductase catalytic subunit
Location	Cmo_Chr04 : 20770420 .. 20771771 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAGGTTTAGGGTAAAAAATGAATAAGCTGAAGAATGATGATCTTATGATTGATTTAGTTATGTTTCTACCGAATCCTCCATTCATATCTCTGTTTGTGCAGCATCGTAGTAAGGAATACTTGGCAGGATTTTGGTTAATACATTGTGGAGGATATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCACCCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCATTTCAGTTCCCTCTGTAAGTAATCCTACATCATAGACATAATGCTTGAAATCTGAAAGCTGAAACTGAGACATTGTGGCTGTGAATTCTGTGCTTTTTGTTTGATCAGATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGATGATGACGACAACGACAAATCTACTACTTGTTCTACTCACATCTCGTCCTATTCAGCTCAGAGAAGCTTCAGCTGGAGGTGCTAACTTTACATTATAGCTAATTAGTTCTCTCAAATGGGAAGAACATGGACTGATCCTACAAAGGGGAATCAGTTATCACTGTAATAAACTTTTTTCTTTTTGTTTTGTTTTCAAGATCTTCATCTGAAGCATTCGAATAGTG

mRNA sequence

TCTAGGTTTAGGGTAAAAAATGAATAAGCTGAAGAATGATGATCTTATGATTGATTTAGTTATGTTTCTACCGAATCCTCCATTCATATCTCTGTTTGTGCAGCATCGTAGTAAGGAATACTTGGCAGGATTTTGGTTAATACATTGTGGAGGATATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCACCCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCATTTCAGTTCCCTCTATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGATGATGACGACAACGACAAATCTACTACTTGTTCTACTCACATCTCGTCCTATTCAGCTCAGAGAAGCTTCAGCTGGAGGTGCTAACTTTACATTATAGCTAATTAGTTCTCTCAAATGGGAAGAACATGGACTGATCCTACAAAGGGGAATCAGTTATCACTGTAATAAACTTTTTTCTTTTTGTTTTGTTTTCAAGATCTTCATCTGAAGCATTCGAATAGTG

Coding sequence (CDS)

ATGGATTGTTCAAAGAGCTTTGAGCTATCTAAGGTGCAGTTAGAGATGATCCATAATGAACCAGATGGTTTTATCCATGAACGTAGCCATTCCAATTCTTCCCGTACCTCGGATTTGTCACGAGACTCAGCTGTTAGCAGCATTTTCCAAATTGATTCTCCTCTTCAGCCAAAACTAGATGCTGACTCTACTAGAATCCATAGTTCATCAAGAGGTTCTCCTCAGATTCGATTATCCGGGGTGCTCGAGAACCATGATCCAAACCGAATACCGTTGTCGATCTTCTCTAGTAAACCATCAAGTCCTATGGAATGGAGCACAGCTTCAAATGAATCATTGTTCAGCATTCATGTGGGAAACAACAGCTTCTCAAGGGAGCAGTTCAATTTTTATACCAAGTCTGGAGAATTGACGAATAACACTAATTCACCCCAGAATCTATCCTCCTCGCCTCCTTTTGTTGATCCAGCAAGAGTGGAGAGTAAAACTGAAATCGTGGTGAATGTCTTCCCTGAACAGGCAGCATCAACTGGAGCTCAAATTCCAGCCATCTCGACTCAGAGTGTAACAAATCGTAGAAAAGAAGTCATAATATCTGTGGATGATCATCGAAGCCGCCCGAGCGAATCGAACGACAGCATGAACAGCTCTCGTTCATTTCAGTTCCCTCTATTGGGAGGTGAAGGTGCAACGCCAAAATCAAACAGATCCGTCTCAACAGACTCATGTACACAACAAAAACAACACCAGCCAGGAACGAAATCGACGAAGCTGTCGCTGGAGCATCAATCTGCATCTAATGAAACTACCTCATCGTCTCGGACTATGAATTTCGGTTCGGGTTGGTTTTCCTGCCTCTCTTGGTGTCGATGTCGGTGA

Homology

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BLAST of CmoCh04G029320 vs. TrEMBL
Match: A0A0A0KXK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.0e-75
Identity = 179/316 (56.65%), Postives = 217/316 (68.67%), Query Frame = 1


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+SNSS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 61  DA---------------DS-TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                DS +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+P 
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGN+SFSRE FNF+ KSGEL  N N+ Q LS+ PPFV+P R ESK+
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKS 180

Query: 181 EIVVNVF--PEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  F  P  ++ST   +   S+Q+V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSVSTDS-CTQQKQHQPGTKSTKLSLEHQ----SASNETTSSSRTM 293
           FPLL  EGATPK+  SVSTDS  T Q+Q        + S +HQ     +S++  S S   
Sbjct: 241 FPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQSAKHQLPELQSSSQAASPSPAT 300

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BLAST of CmoCh04G029320 vs. TrEMBL
Match: A5C6V8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038105 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.4e-19
Identity = 96/280 (34.29%), Postives = 146/280 (52.14%), Query Frame = 1


Query: 29  SHSNSSRTSDLSRDSAVSSIFQID---SPLQP-----KLDA------DSTRIHSSSRGSP 88
           S ++SS  S+LS+ + +S+   I    +PL P      L+A      D +  + S+  SP
Sbjct: 17  STADSSEESNLSKSNVLSNSLVISEQAAPLTPPWPVSSLEAYTQSGVDGSMQNGSTTQSP 76

Query: 89  QIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKS 148
            I+  G    +DPNRIP S+F+SKP++P+EWS AS+ESLFSIHVGN SFS E F    KS
Sbjct: 77  PIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFSTE-FAQLGKS 136

Query: 149 GELTNNTNSPQNL---SSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTN 208
           GELT +    Q L   S  PP  + A ++  ++ +      +  S+      +  ++  +
Sbjct: 137 GELTKS----QELIFPSGLPPVTEAADMDRSSQDMEKGSGVRETSS-QTTKEVFRENAED 196

Query: 209 RRKEVIISVDDHRSRPS--ESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQH 268
             KE +   +  R+  S   S+ S+NS+ SF FP+L G G    S + V T+   QQ+Q 
Sbjct: 197 HGKEKMPPAEGFRNSASSHHSDGSINSTLSFAFPVLDGNGGRSISVK-VDTEKHQQQEQP 256

Query: 269 QPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWC 290
           QP  +    SL H   + +  ++++       WFSC S C
Sbjct: 257 QPQPQPQPQSLPHAPEATQNAAATK-------WFSCFSCC 282

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BLAST of CmoCh04G029320 vs. TrEMBL
Match: A0A067JTI0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.9e-17
Identity = 75/208 (36.06%), Postives = 108/208 (51.92%), Query Frame = 1


Query: 85  HDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSP 144
           +DPNRIP +IF+ KP+SPMEWS ASNESLFSIH+GNNSF+R+      KSGEL      P
Sbjct: 80  YDPNRIPSAIFTGKPASPMEWSLASNESLFSIHMGNNSFTRDHVYMLYKSGELP----KP 139

Query: 145 QNLSSSPPFVDPARVESKTEIVVNVFPE---QAASTGAQIPAISTQSVTNRRKEVIISVD 204
             +++SPP + P  +E++    + +  E   + A T  Q+P    + V+   K+   S +
Sbjct: 140 DEMNNSPPNMFPV-METRKSGDLKMTEEKLTEPAKTETQLPG---KEVSGTSKKKAPSAE 199

Query: 205 DHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQHQPGTKSTKLSLE 264
           D R       +S +S++SFQFP+L        S + V     +QQ+Q Q           
Sbjct: 200 DVR-------NSSSSTQSFQFPVLEANVGGSASVKVVMDKQPSQQRQQQ----------- 259

Query: 265 HQSASNETTSSSRTMNFGSGWFSCLSWC 290
            Q  +      +     G+ WFSC S C
Sbjct: 260 QQEEAQPQAPGTPPKPAGNSWFSCFSCC 261

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BLAST of CmoCh04G029320 vs. TrEMBL
Match: M5XD52_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-16
Identity = 59/133 (44.36%), Postives = 82/133 (61.65%), Query Frame = 1


Query: 17  IHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLDA----DSTRIHSSSRG 76
           +H E D   + R+ S  S +S  S  ++ S    ++S +  K D     ++T+    S+G
Sbjct: 15  VHFESDMVNYRRNSSFPSSSSSSSSSTSSSPRSSLESDVTDKADVNGSFETTQQGQESQG 74

Query: 77  SPQI-------RLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSR 136
            P +        L+  L+ +DP+RIP SIF+SKPS+ M+WS ASNESLFS+HVGNNSFSR
Sbjct: 75  PPPLPEASSSQTLAWSLQRYDPSRIPTSIFASKPSTGMDWSVASNESLFSLHVGNNSFSR 134

Query: 137 EQFNFYTKSGELT 139
           EQF+   KSGELT
Sbjct: 135 EQFSMLYKSGELT 147

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BLAST of CmoCh04G029320 vs. TrEMBL
Match: M0ZLN9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001359 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 1


Query: 73  SPQIRLSGVLENHDPNRIPLSIFSSKPS-SPMEWSTASNESLFSIHVGNNSFSREQFNFY 132
           SP +   G    +DPNRIP SIFSSKP+ S MEWSTASNESLFSIH+GNNSFSR+QFN  
Sbjct: 120 SPPMHTMGHPPGYDPNRIPSSIFSSKPNTSGMEWSTASNESLFSIHMGNNSFSRDQFNMM 179

Query: 133 TKSGELTNNTNSPQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTN 192
            +SGEL      P+  S+SP      +   K  +  N+ P    +T  ++ + +     +
Sbjct: 180 YRSGELI----KPEEWSNSPYNAPDVKSNDKKTLPPNLPPLVEMATDKEVKSETKMESPH 239

Query: 193 RRKEVIIS 200
           ++++++ S
Sbjct: 240 KQEKIVES 243

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BLAST of CmoCh04G029320 vs. TAIR10
Match: AT2G03630.1 (AT2G03630.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-09
Identity = 68/233 (29.18%), Postives = 103/233 (44.21%), Query Frame = 1


Query: 5   KSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLDADST 64
           K+  L + +  +I++E    +   S S+SS +S LS    +      +S   P++ +   
Sbjct: 35  KTIPLQETETVIINSESHSRLSSSSSSSSSSSSYLSPPKDLPEEVLKESLNDPEISSPPV 94

Query: 65  RIHSSSRGSPQIRLSGVLENHDPNRIPLSIFS-SKPSSPMEWSTASNESLFSIHVGNNSF 124
           ++                  +DPNRIP S+F  SK + P EWS  SNESLFSIH+GNNSF
Sbjct: 95  QVMDRDNNG----------KYDPNRIPSSVFERSKSNVPAEWSCTSNESLFSIHLGNNSF 154

Query: 125 SREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPA 184
           +    +   KSGEL     S + L+ SP    P    S+ + VV   P+   S   +   
Sbjct: 155 TGYGGDL-MKSGEL---YKSGELLAYSPGLPMPPVPGSEPKPVVEE-PKVVESDKEEKVV 214

Query: 185 ISTQSVTNRRKEVIISVDDHRSRPS------------ESNDSMNSSRSFQFPL 225
           +  ++ T+   E     + H                  SN S NS+ SF FP+
Sbjct: 215 LVEETHTSSSDEEEGKRESHEKEQHPAVSWKTPTTSYRSNRSSNSAHSFSFPM 252

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BLAST of CmoCh04G029320 vs. TAIR10
Match: AT3G02125.1 (AT3G02125.1 unknown protein)

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-07
Identity = 43/136 (31.62%), Postives = 61/136 (44.85%), Query Frame = 1


Query: 82  LENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSRE-QFNFYTKSGELTNN 141
           L  +DP RIP S+FSSKP +  EWS ASNESLFSIH GN S S   +     +  E  + 
Sbjct: 86  LPGYDPTRIPSSVFSSKPGNSTEWSLASNESLFSIHDGNFSISTALRLAEIPRFEETVHV 145

Query: 142 TNSPQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTNRRKEVIISV 201
                ++   PP   P   E +T  +    P Q  ++ + I         N  +E +  V
Sbjct: 146 ITEINSVPLPPPVKKPNEYEKET--IAEKEPYQVENSNSDIE-------DNEEEEKMSEV 205

Query: 202 DDHRSRPSESNDSMNS 217
           +       E  D + +
Sbjct: 206 ESDDEHEEEQTDMIEA 212

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BLAST of CmoCh04G029320 vs. TAIR10
Match: AT1G74220.1 (AT1G74220.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 52/164 (31.71%), Postives = 75/164 (45.73%), Query Frame = 1


Query: 84  NHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNS 143
           N  P RIP  +F+   S+  EWST SNESLFSIH+GNNSF+      Y KSGELT     
Sbjct: 84  NTPPYRIPSHVFARTTSTAPEWSTISNESLFSIHMGNNSFTGGD---YFKSGELT----F 143

Query: 144 PQNLSSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTNRRKEVIISVDDH 203
           PQ          P+ + S     +   P      GA   A   ++  +  K+   + +  
Sbjct: 144 PQ---------PPSPITSPLPSPLPSTPHNVNQGGAVGAAAEVKTPVDIGKK---AAETD 203

Query: 204 RSRPSESNDSMNSSRSFQFPLLGGEGA-----TPKSNRSVSTDS 243
           ++  +   D   ++ S +  ++  E A     T K +RSVS  S
Sbjct: 204 KAYRASKEDEQKAAASIREVIMANEAANNNNKTNKLDRSVSRRS 228

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BLAST of CmoCh04G029320 vs. TAIR10
Match: AT5G39200.1 (AT5G39200.1 unknown protein)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06
Identity = 63/211 (29.86%), Postives = 99/211 (46.92%), Query Frame = 1


Query: 85  HDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTN--NTN 144
           ++P+RIP S+F++  +   EWS  SNESLFSIH+G++SFS+       KSGELTN   T 
Sbjct: 9   YEPDRIPHSVFATSVTPKQEWSIQSNESLFSIHMGDHSFSK-----MYKSGELTNFEYTA 68

Query: 145 SPQNLSSSPPFVDP--ARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTNRRKEVIISV 204
           SP  +S     +D   A  ++ T+ V     E    TG +   ++     + R+++ IS 
Sbjct: 69  SPY-ISYYNNNIDNKIAPTDAGTKEVNITMVETGPKTGNR-DGLTNVPKPDPRQQIPIS- 128

Query: 205 DDHRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQHQPGTKSTKLSL 264
               ++   S  S NS+ SF FP LG      +  R  S ++ ++  + +     +K  L
Sbjct: 129 ---PTKSCHSETSNNSTTSFAFPTLG----EYQQERKTSLNTKSESGKRELSRLDSKTGL 188

Query: 265 EHQSASNETTSSSRTMNFGSGWFSCLSWCRC 292
               +      +        GW SC   C C
Sbjct: 189 YPDDSKQGGAGAG-----AGGWLSC---CLC 196

[Close]

BLAST of CmoCh04G029320 vs. NCBI nr
Match: gi|778707424|ref|XP_011656011.1| (PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 1.0e-74
Identity = 179/316 (56.65%), Postives = 217/316 (68.67%), Query Frame = 1


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+SNSS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 3   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 62

Query: 61  DA---------------DS-TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                DS +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+P 
Sbjct: 63  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 122

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGN+SFSRE FNF+ KSGEL  N N+ Q LS+ PPFV+P R ESK+
Sbjct: 123 EWSTASNESLFSIHVGNSSFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKS 182

Query: 181 EIVVNVF--PEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  F  P  ++ST   +   S+Q+V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 183 EIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 242

Query: 241 FPLLGGEGATPKSNRSVSTDS-CTQQKQHQPGTKSTKLSLEHQ----SASNETTSSSRTM 293
           FPLL  EGATPK+  SVSTDS  T Q+Q        + S +HQ     +S++  S S   
Sbjct: 243 FPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQSAKHQLPELQSSSQAASPSPAT 302

[Close]

BLAST of CmoCh04G029320 vs. NCBI nr
Match: gi|700197334|gb|KGN52511.1| (hypothetical protein Csa_5G639470 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 1.0e-74
Identity = 179/316 (56.65%), Postives = 217/316 (68.67%), Query Frame = 1


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+SNSS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDTTQSFKESKGQLDQVNHKETDAISDRSNSNSSCTSDLSQDSAVSSIFQSDPPVLQSKP 60

Query: 61  DA---------------DS-TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                DS +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+P 
Sbjct: 61  DVAEPLGAVQTVENQPVDSLSRIQSSSRGSSHIRLSGPLGNHDPNRIPVSIFSGRPSNPT 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGN+SFSRE FNF+ KSGEL  N N+ Q LS+ PPFV+P R ESK+
Sbjct: 121 EWSTASNESLFSIHVGNSSFSREHFNFF-KSGELLMNPNASQTLSNLPPFVEPLRAESKS 180

Query: 181 EIVVNVF--PEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  F  P  ++ST   +   S+Q+V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EIAVKTFAEPVTSSSTAHPVSPTSSQNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSVSTDS-CTQQKQHQPGTKSTKLSLEHQ----SASNETTSSSRTM 293
           FPLL  EGATPK+  SVSTDS  T Q+Q        + S +HQ     +S++  S S   
Sbjct: 241 FPLLASEGATPKTTSSVSTDSGVTSQQQPSKLQSKKRQSAKHQLPELQSSSQAASPSPAT 300

[Close]

BLAST of CmoCh04G029320 vs. NCBI nr
Match: gi|659118928|ref|XP_008459383.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 286.2 bits (731), Expect = 6.5e-74
Identity = 177/315 (56.19%), Postives = 213/315 (67.62%), Query Frame = 1


Query: 1   MDCSKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSP-LQPKL 60
           MD ++SF+ SK QL+ ++++    I +RS+S+SS TSDLS+DSAVSSIFQ D P LQ K 
Sbjct: 1   MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKS 60

Query: 61  DADS----------------TRIHSSSRGSPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 120
           D                   +RI SSSRGS  IRLSG L NHDPNRIP+SIFS +PS+PM
Sbjct: 61  DVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPM 120

Query: 121 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNNTNSPQNLSSSPPFVDPARVESKT 180
           EWSTASNESLFSIHVGNNSFSRE FNF+ KSGEL  N NS Q LS+ PPFV+P R +SK+
Sbjct: 121 EWSTASNESLFSIHVGNNSFSREHFNFF-KSGELLMNPNSSQTLSNLPPFVEPLRADSKS 180

Query: 181 EIVV--NVFPEQAASTGAQIPAISTQSVTNRRKEVIISVDDHRSRPSESNDSMNSSRSFQ 240
           EI V  +  P  +AST   I   S+ +V + +KEV  ++D+ R R S SNDSMNSSRSFQ
Sbjct: 181 EITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQ 240

Query: 241 FPLLGGEGATPKSNRSVSTDS-CTQQKQHQPGTKSTKLSLEHQ---SASNETTSSSRTMN 293
           FPLL  EGATPK+  SVSTDS  T  +Q        + S +HQ     S+   +SS   N
Sbjct: 241 FPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAASSPATN 300

[Close]

BLAST of CmoCh04G029320 vs. NCBI nr
Match: gi|698536901|ref|XP_009764660.1| (PREDICTED: circumsporozoite protein [Nicotiana sylvestris])

HSP 1 Score: 108.2 bits (269), Expect = 2.4e-20
Identity = 116/358 (32.40%), Postives = 155/358 (43.30%), Query Frame = 1


Query: 4   SKSFELSKVQLEMIHNEPDGFIHERSHSNSSRTSDLSRDSAVSSIFQIDSPLQPKLDADS 63
           S S     ++L     +P G ++ +S  +SS    LS   A SS     SP  P      
Sbjct: 42  SPSSSEDSLELNTSRKDPLGDLYTKSEKDSS----LSPSPASSS-----SPDVPNQTPQW 101

Query: 64  TRIHSSSRG--------------------SPQIRLSGVLENHDPNRIPLSIFSSKPSSPM 123
           + I +S RG                    SP I   G    +DPNRIP S+FSSKP++PM
Sbjct: 102 SMISASPRGEMEALPFPDEWNGANPSPMKSPPIHTMGHPPGYDPNRIPSSVFSSKPNNPM 161

Query: 124 EWSTASNESLFSIHVGNNSFSREQFNFYTKSGELTNN---TNSPQNLSSSPPFVDPARVE 183
           EWSTASNESLFSIH+GNNSFSR+QFN   +SGELT     +NSP N  ++ P V     +
Sbjct: 162 EWSTASNESLFSIHMGNNSFSRDQFNMMYRSGELTKPEEWSNSPANPYNAQPEVKSNEKK 221

Query: 184 SKTE------IVVNVFPEQAASTGAQIPAISTQSVT-----------NRRKEVIISVDD- 243
           S         + V    E  +++  ++PA+  + V            N  KE   +VD+ 
Sbjct: 222 SLPPNLPLPLVEVATDKEVKSASVVEVPAMQEKIVESPKIVFVENHENNSKEKTSNVDEV 281

Query: 244 ---------------------HRSRPSESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTD 292
                                H S P  SN+S NSS SF FP+L  +     S ++ S  
Sbjct: 282 QHTASAPHKSDGNVVPPTEASHASSPRLSNESGNSSSSFAFPVLLNDAGKTGSLKAPSAK 341

[Close]

BLAST of CmoCh04G029320 vs. NCBI nr
Match: gi|147803535|emb|CAN77667.1| (hypothetical protein VITISV_038105 [Vitis vinifera])

HSP 1 Score: 103.2 bits (256), Expect = 7.8e-19
Identity = 96/280 (34.29%), Postives = 146/280 (52.14%), Query Frame = 1


Query: 29  SHSNSSRTSDLSRDSAVSSIFQID---SPLQP-----KLDA------DSTRIHSSSRGSP 88
           S ++SS  S+LS+ + +S+   I    +PL P      L+A      D +  + S+  SP
Sbjct: 17  STADSSEESNLSKSNVLSNSLVISEQAAPLTPPWPVSSLEAYTQSGVDGSMQNGSTTQSP 76

Query: 89  QIRLSGVLENHDPNRIPLSIFSSKPSSPMEWSTASNESLFSIHVGNNSFSREQFNFYTKS 148
            I+  G    +DPNRIP S+F+SKP++P+EWS AS+ESLFSIHVGN SFS E F    KS
Sbjct: 77  PIQTMGRSGGYDPNRIPSSVFASKPTTPLEWSVASSESLFSIHVGNASFSTE-FAQLGKS 136

Query: 149 GELTNNTNSPQNL---SSSPPFVDPARVESKTEIVVNVFPEQAASTGAQIPAISTQSVTN 208
           GELT +    Q L   S  PP  + A ++  ++ +      +  S+      +  ++  +
Sbjct: 137 GELTKS----QELIFPSGLPPVTEAADMDRSSQDMEKGSGVRETSS-QTTKEVFRENAED 196

Query: 209 RRKEVIISVDDHRSRPS--ESNDSMNSSRSFQFPLLGGEGATPKSNRSVSTDSCTQQKQH 268
             KE +   +  R+  S   S+ S+NS+ SF FP+L G G    S + V T+   QQ+Q 
Sbjct: 197 HGKEKMPPAEGFRNSASSHHSDGSINSTLSFAFPVLDGNGGRSISVK-VDTEKHQQQEQP 256

Query: 269 QPGTKSTKLSLEHQSASNETTSSSRTMNFGSGWFSCLSWC 290
           QP  +    SL H   + +  ++++       WFSC S C
Sbjct: 257 QPQPQPQPQSLPHAPEATQNAAATK-------WFSCFSCC 282

The following BLAST results are available for this feature:

BLAST of CmoCh04G029320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G029320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXK8_CUCSA	7.0e-75	56.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G639470 PE=4 SV=1	[more]
A5C6V8_VITVI	5.4e-19	34.29	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038105 PE=4 SV=1	[more]
A0A067JTI0_JATCU	3.9e-17	36.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19945 PE=4 SV=1	[more]
M5XD52_PRUPE	1.1e-16	44.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009937mg PE=4 SV=1	[more]
M0ZLN9_SOLTU	2.8e-15	42.97	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001359 PE=4 SV=1	[more]

BLAST of CmoCh04G029320 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G03630.1	2.7e-09	29.18	unknown protein	[more]
AT3G02125.1	4.3e-07	31.62	unknown protein	[more]
AT1G74220.1	1.2e-06	31.71	unknown protein	[more]
AT5G39200.1	1.2e-06	29.86	unknown protein	[more]

BLAST of CmoCh04G029320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778707424\|ref\|XP_011656011.1\|	1.0e-74	56.65	PREDICTED: uncharacterized protein LOC105435613 [Cucumis sativus]	[more]
gi\|700197334\|gb\|KGN52511.1\|	1.0e-74	56.65	hypothetical protein Csa_5G639470 [Cucumis sativus]	[more]
gi\|659118928\|ref\|XP_008459383.1\|	6.5e-74	56.19	PREDICTED: putative protein TPRXL [Cucumis melo]	[more]
gi\|698536901\|ref\|XP_009764660.1\|	2.4e-20	32.40	PREDICTED: circumsporozoite protein [Nicotiana sylvestris]	[more]
gi\|147803535\|emb\|CAN77667.1\|	7.8e-19	34.29	hypothetical protein VITISV_038105 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G029320.1	CmoCh04G029320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33673	FAMILY NOT NAMED	coord: 86..291 score: 7.6
None	No IPR available	PANTHER	PTHR33673:SF1	GENOMIC DNA, CHROMOSOME 5, TAC CLONE:K3K3	coord: 86..291 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G029320	Cucsa.157860	Cucumber (Gy14) v1	cgycmoB0442
CmoCh04G029320	CmaCh15G002350	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G029320	CmaCh04G028000	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G029320	Cla016519	Watermelon (97103) v1	cmowmB730
CmoCh04G029320	Csa5G639470	Cucumber (Chinese Long) v2	cmocuB714
CmoCh04G029320	MELO3C022033	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G029320	MELO3C012154	Melon (DHL92) v3.5.1	cmomeB655
CmoCh04G029320	ClCG11G004790	Watermelon (Charleston Gray)	cmowcgB621
CmoCh04G029320	ClCG05G023700	Watermelon (Charleston Gray)	cmowcgB667
CmoCh04G029320	CSPI05G29370	Wild cucumber (PI 183967)	cmocpiB722
CmoCh04G029320	Lsi03G001700	Bottle gourd (USVL1VR-Ls)	cmolsiB645
CmoCh04G029320	Cp4.1LG01g22560	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G029320	MELO3C012154.2	Melon (DHL92) v3.6.1	cmomedB745
CmoCh04G029320	MELO3C022033.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G029320	CsaV3_5G038510	Cucumber (Chinese Long) v3	cmocucB0846
CmoCh04G029320	Cla97C11G211560	Watermelon (97103) v2	cmowmbB697
CmoCh04G029320	Bhi06G000278	Wax gourd	cmowgoB0836
CmoCh04G029320	CsGy5G023850	Cucumber (Gy14) v2	cgybcmoB642
CmoCh04G029320	CsGy5G028830	Cucumber (Gy14) v2	cgybcmoB625
CmoCh04G029320	Carg05882	Silver-seed gourd	carcmoB0033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G029320	Cucumber (Chinese Long) v3	cmocucB0800
CmoCh04G029320	Watermelon (97103) v2	cmowmbB727
CmoCh04G029320	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G029320	Cucurbita moschata (Rifu)	cmocmoB364
CmoCh04G029320	Cucumber (Gy14) v1	cgycmoB0271
CmoCh04G029320	Wild cucumber (PI 183967)	cmocpiB686
CmoCh04G029320	Cucumber (Chinese Long) v2	cmocuB675
CmoCh04G029320	Melon (DHL92) v3.5.1	cmomeB664
CmoCh04G029320	Watermelon (Charleston Gray)	cmowcgB653
CmoCh04G029320	Watermelon (97103) v1	cmowmB718
CmoCh04G029320	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G029320	Bottle gourd (USVL1VR-Ls)	cmolsiB636
CmoCh04G029320	Melon (DHL92) v3.6.1	cmomedB750
CmoCh04G029320	Silver-seed gourd	carcmoB0370