Cucsa.142720 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.142720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Late embryogenesis abundant hydroxyproline-rich glycoprotein
Location	scaffold01079 : 927392 .. 928093 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAGGACCAAATCTACCGCCTTCCTCCTCCCGAAAACGCCCACCGCTTCAAACTCTACACTCGCCAAAGCCACCGCCGCCGCAACCGCTGCCGCTCCTGCCTCTTCTGCCTCCTCGCCATCCTCGCCATCCTCATCATCCTTCTAGGCATCACCCTCGCCGTTTTCTACTTTGTCGTTCGCCCTAAATCACCCAACTACTCCATCGACGCCATTTCCATTTCCGGACTGAATAACCTAACATCCTCCGCGATCTCGCCTGTGTTCAATCTGAGTGTTCGAGCGGATAATCCGAATAAGAAGATCGGAATCTATTACTTAACAGGTAGCTCAGTCCGAATCTATTCCTCTAACGAGAAACTGTCGGAGGGTGTTTTGCCTGATTTCTTCCAGCCTTCGAAGAATGTGAGTGTGCTTAGAGCTGTTGTGAGAGGAGCCGGAGTTAATTTGTCGAGTGGGGCGAAGAATGAGATAATTGAATGGGTGAAACAGAGGGCGGTGTTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAATTGGATCGGTGAAGAGTTGGAAGATAAAAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGGCAGCGGCGAAGATTGTGAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

mRNA sequence

CCCTCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAGGACCAAATCTACCGCCTTCCTCCTCCCGAAAACGCCCACCGCTTCAAACTCTACACTCGCCAAAGCCACCGCCGCCGCAACCGCTGCCGCTCCTGCCTCTTCTGCCTCCTCGCCATCCTCGCCATCCTCATCATCCTTCTAGGCATCACCCTCGCCGTTTTCTACTTTGTCGTTCGCCCTAAATCACCCAACTACTCCATCGACGCCATTTCCATTTCCGGACTGAATAACCTAACATCCTCCGCGATCTCGCCTGTGTTCAATCTGAGTGTTCGAGCGGATAATCCGAATAAGAAGATCGGAATCTATTACTTAACAGGTAGCTCAGTCCGAATCTATTCCTCTAACGAGAAACTGTCGGAGGGTGTTTTGCCTGATTTCTTCCAGCCTTCGAAGAATGTGAGTGTGCTTAGAGCTGTTGTGAGAGGAGCCGGAGTTAATTTGTCGAGTGGGGCGAAGAATGAGATAATTGAATGGGTGAAACAGAGGGCGGTGTTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAATTGGATCGGTGAAGAGTTGGAAGATAAAAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGGCAGCGGCGAAGATTGTGAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

Coding sequence (CDS)

CCCTCCTCTCCACCTCCCGGCACCTACGTCATCCAGCTCCCCAAGGACCAAATCTACCGCCTTCCTCCTCCCGAAAACGCCCACCGCTTCAAACTCTACACTCGCCAAAGCCACCGCCGCCGCAACCGCTGCCGCTCCTGCCTCTTCTGCCTCCTCGCCATCCTCGCCATCCTCATCATCCTTCTAGGCATCACCCTCGCCGTTTTCTACTTTGTCGTTCGCCCTAAATCACCCAACTACTCCATCGACGCCATTTCCATTTCCGGACTGAATAACCTAACATCCTCCGCGATCTCGCCTGTGTTCAATCTGAGTGTTCGAGCGGATAATCCGAATAAGAAGATCGGAATCTATTACTTAACAGGTAGCTCAGTCCGAATCTATTCCTCTAACGAGAAACTGTCGGAGGGTGTTTTGCCTGATTTCTTCCAGCCTTCGAAGAATGTGAGTGTGCTTAGAGCTGTTGTGAGAGGAGCCGGAGTTAATTTGTCGAGTGGGGCGAAGAATGAGATAATTGAATGGGTGAAACAGAGGGCGGTGTTGTTGAAGGTTGAGATTGGAGTTCCGATTAAGGTGAAAATTGGATCGGTGAAGAGTTGGAAGATAAAAGTGAAGGTGAATTGTGATGTGACGGTGGATGAGTTGACGGCAGCGGCGAAGATTGTGAAGAAGAATTGCGATTATAGTGTGAAGATTTGGTAG

Protein sequence

PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW*

Homology

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BLAST of Cucsa.142720 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.6e-14
Identity = 56/217 (25.81%), Postives = 105/217 (48.39%), Query Frame = 1


Query: 21  LPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLA-ILAILIILLGITLAVFYFVVRPKSPN 80
           +PPP      K Y R+ H R   C  CL  L   ++  LI++LG+   +F+ +VRP++  
Sbjct: 16  VPPPAP----KGYYRRGHGRG--CGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIK 75

Query: 81  YSIDAISISGLNNLTSSAISPV-FNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGV 140
           + +   S++  ++ +   I      L+V   NPNK+IG+YY        Y   ++ S   
Sbjct: 76  FHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNKRIGLYY-DRIEAHAYYEGKRFSTIT 135

Query: 141 LPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAVL-LKVEIGVPIKVKIGSV 200
           L  F+Q  KN +VL    +G  + + +  ++  +   +   V  ++++  + ++ K+G +
Sbjct: 136 LTPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDL 195

Query: 201 KSWKIKVKVNCD------VTVDELTAAAKIVKKNCDY 229
           K  +IK KV+CD       T +  T  + +    CD+
Sbjct: 196 KFRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDF 225

[Close]

BLAST of Cucsa.142720 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12
Identity = 59/213 (27.70%), Postives = 96/213 (45.07%), Query Frame = 1


Query: 21  LPPPENAHRFKLYTRQSHRRRNRCRSCL--------FCLLA----ILAILIILLGITLAV 80
           +PPP+           SH RR     CL         C+L+    IL  + +LLGI   +
Sbjct: 13  IPPPKKVSH-------SHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALI 72

Query: 81  FYFVVRPKSPNYSI-DAISISGLNNLTSSAISPVFNLSVRAD------NPNKKIGIYYLT 140
            + + RP +  + + DA        LT   + P  NL    D      NPN++IG+YY  
Sbjct: 73  IWLIFRPNAIKFHVTDA-------KLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYY-D 132

Query: 141 GSSVRIYSSNEKLS-EGVLPDFFQPSKNVSVLRAVVRGAG-VNLSSGAKNEIIEWVKQRA 200
              VR Y  +++      +  F+Q  KN +V+   + G   V L  G + ++ E V  + 
Sbjct: 133 EIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQI 192

Query: 201 VLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTV 213
             +  ++ + I+ K G +KSW+ K K+ CD+ V
Sbjct: 193 YRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

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BLAST of Cucsa.142720 vs. TrEMBL
Match: A0A0A0LX01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601000 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 2.8e-127
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII
Sbjct: 26  PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 85

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL 120
           LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL
Sbjct: 86  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL 145

Query: 121 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 180
           TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV
Sbjct: 146 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 205

Query: 181 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW
Sbjct: 206 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 258

[Close]

BLAST of Cucsa.142720 vs. TrEMBL
Match: A0A0S3RK74_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G055600 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.0e-65
Identity = 125/233 (53.65%), Postives = 167/233 (71.67%), Query Frame = 1


Query: 4   PPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLG 63
           P PGTYVI++PKDQ+YR+PP ENA R+  YT + HRR +RC SC   L+ IL+ILI+LLG
Sbjct: 42  PSPGTYVIKIPKDQVYRVPPAENARRYDQYTHRKHRR-SRCCSCCCWLIGILSILIVLLG 101

Query: 64  ITLAVFYFVVRPKSPNYSIDAISISGLNNLTSS---AISPVFNLSVRADNPNKKIGIYYL 123
           I   +FY V RPK+P Y+I+ I+I G+N  + S   AISP FN++V+ADNPN KIGIYYL
Sbjct: 102 IAAGIFYLVFRPKAPKYTIEDIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYL 161

Query: 124 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 183
             SS  ++ ++ +L  G LP F QPS NV+V   V++G G+ L S  +  ++E   +R V
Sbjct: 162 KDSSAEVFYNDARLCNGALPAFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKV 221

Query: 184 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
            L V I  P+K+K+GSVK+WKI VK++CDVTV++LTA AKIV K CDY V +W
Sbjct: 222 PLTVRIRAPVKIKVGSVKTWKITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]

BLAST of Cucsa.142720 vs. TrEMBL
Match: A0A0L9UVC0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g041700 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.0e-65
Identity = 125/233 (53.65%), Postives = 167/233 (71.67%), Query Frame = 1


Query: 4   PPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLG 63
           P PGTYVI++PKDQ+YR+PP ENA R+  YT + HRR +RC SC   L+ IL+ILI+LLG
Sbjct: 42  PSPGTYVIKIPKDQVYRVPPAENARRYDQYTHRKHRR-SRCCSCCCWLIGILSILIVLLG 101

Query: 64  ITLAVFYFVVRPKSPNYSIDAISISGLNNLTSS---AISPVFNLSVRADNPNKKIGIYYL 123
           I   +FY V RPK+P Y+I+ I+I G+N  + S   AISP FN++V+ADNPN KIGIYYL
Sbjct: 102 IAAGIFYLVFRPKAPKYTIEDIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYL 161

Query: 124 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 183
             SS  ++ ++ +L  G LP F QPS NV+V   V++G G+ L S  +  ++E   +R V
Sbjct: 162 KDSSAEVFYNDARLCNGALPAFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKV 221

Query: 184 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
            L V I  P+K+K+GSVK+WKI VK++CDVTV++LTA AKIV K CDY V +W
Sbjct: 222 PLTVRIRAPVKIKVGSVKTWKITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]

BLAST of Cucsa.142720 vs. TrEMBL
Match: A0A151U1M3_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005798 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 121/236 (51.27%), Postives = 171/236 (72.46%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           PS  PP +YVI +PKDQIYR+PPPENA R+  YTR+ HR  NRC  CL  L+ ++ +L++
Sbjct: 35  PSQNPPVSYVIHIPKDQIYRVPPPENARRYDQYTRRKHRP-NRCCRCLCWLIGLIVVLVV 94

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSA---ISPVFNLSVRADNPNKKIGI 120
           LLGI   + Y V RP++PNY I++I++ G+N  ++SA   ISPVFN++V+ADNPN KIGI
Sbjct: 95  LLGIAAGILYLVFRPEAPNYGIESIAVRGINLTSASAAAAISPVFNVTVKADNPNDKIGI 154

Query: 121 YYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQ 180
           +YL  S   ++ ++ +LS G LP F+QPS NV+V R V++G G+ L S  +  ++  V +
Sbjct: 155 HYLKDSHAEVFYADVELSNGALPAFYQPSNNVTVFRTVLKGNGIVLRSEDRRALVNAVTK 214

Query: 181 RAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           + V L V I  P+K+K+GSVK+WKI V+V+CDVTV+ LTA AKIV K+C+Y V +W
Sbjct: 215 QKVPLTVRIRAPVKIKVGSVKTWKITVRVDCDVTVNALTANAKIVSKHCNYGVDLW 269

[Close]

BLAST of Cucsa.142720 vs. TrEMBL
Match: B9HQ55_POPTR (Harpin-induced family protein OS=Populus trichocarpa GN=POPTR_0009s16050g PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-64
Identity = 119/233 (51.07%), Postives = 165/233 (70.82%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           P  PPPGTYVIQ+PKDQ+YR+PPPENA RF+  +R+  RR + C  CL   L+ LA  + 
Sbjct: 50  PVQPPPGTYVIQIPKDQVYRVPPPENAQRFERLSRRKPRR-SHCCCCLCWFLSFLAAFLF 109

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL 120
           L+G+  A+ Y V RP+SP+YSI+ +SISGLN  +S  ISP FN++VRA+NPN KIGIYY 
Sbjct: 110 LVGLAAAILYLVFRPESPDYSIERVSISGLNLTSSGPISPEFNVTVRANNPNNKIGIYYE 169

Query: 121 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 180
            GSSV +Y+   K++ G LP F+Q   NV+V    ++G+ + L+SG +  ++  V +  V
Sbjct: 170 KGSSVNVYNDGVKMAAGSLPVFYQDKNNVTVFVTSLKGSAIELTSGVRTALVNGVSKGTV 229

Query: 181 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
              + +  P+K K+GSVK+WKI VKV+CD+TVD+LTA+AKI  K+CDY V +W
Sbjct: 230 PFNLALRAPVKFKVGSVKTWKITVKVDCDLTVDKLTASAKIGSKSCDYGVDLW 281

[Close]

BLAST of Cucsa.142720 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 244.2 bits (622), Expect = 8.0e-65
Identity = 115/231 (49.78%), Postives = 167/231 (72.29%), Query Frame = 1


Query: 3   SPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILL 62
           +PPP TYVIQ+PKDQIYR+PPPENAHRF+  +R+   R N CR C    LA + ILI+L 
Sbjct: 31  APPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSN-CRCCFCSFLAAVFILIVLA 90

Query: 63  GITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYLTG 122
           GI+ AV Y + RP++P YSI+  S+SG+N  ++S ISP FN++VR+ N N KIG+YY   
Sbjct: 91  GISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKE 150

Query: 123 SSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAVLL 182
           SSV +Y ++  +S GV+P F+QP+KNV+V++ V+ G+ + L+SG + E+   V ++ V  
Sbjct: 151 SSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPF 210

Query: 183 KVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           K++I  P+K+K GSVK+W + V V+CDVTVD+LTA ++IV + C + V +W
Sbjct: 211 KLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of Cucsa.142720 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-50
Identity = 92/229 (40.17%), Postives = 145/229 (63.32%), Query Frame = 1


Query: 4   PPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLG 63
           PPPGTYVI+LPKDQIYR+PPPENAHR++  +R+    ++ CR CL   L+ L I+I+L  
Sbjct: 53  PPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRK-TNKSCCRRCLCYSLSALLIIIVLAA 112

Query: 64  ITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYLTGS 123
           I    FY V +P  P +S+  +S++G+N  +SS  SPV  + +R+ N   K+G+ Y  G+
Sbjct: 113 IAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGN 172

Query: 124 SVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAVLLK 183
              ++ +  KL  G    F QP+ NV+V+  V++G+ V L S ++ E+ E  K+  V   
Sbjct: 173 EADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFG 232

Query: 184 VEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKI 233
           + I  P+K K+GSV +W + + V+C +TVD+LTA+A +  +NC+  + +
Sbjct: 233 LRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCETGLSL 280

[Close]

BLAST of Cucsa.142720 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-27
Identity = 60/197 (30.46%), Postives = 111/197 (56.35%), Query Frame = 1


Query: 39  RRRNRCRSCLFCLLAILAILIILLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAI 98
           +RR+ C  C       L +L++ +G ++ + Y V +PK P+YSID + ++       S++
Sbjct: 57  KRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSL 116

Query: 99  SPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRG 158
           +  FN+++ A NPN+KIGIYY  GS + ++    +LS G LP F+Q  +N +V+   + G
Sbjct: 117 TTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTG 176

Query: 159 AGVNLSSGAKNEIIEWVKQRA-VLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTA 218
              N +SG +  + E  ++   + L++ +  P++VK G +K ++++  V C V VD L  
Sbjct: 177 QTQN-ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLAT 236

Query: 219 --AAKIVKKNCDYSVKI 233
               KI   +C + +++
Sbjct: 237 NNVIKIQSSSCKFRLRL 252

[Close]

BLAST of Cucsa.142720 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26
Identity = 58/191 (30.37%), Postives = 106/191 (55.50%), Query Frame = 1


Query: 44  CRSCLFCLLAILAILIILLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFN 103
           CR C+   L +L +LI+++G  + + Y V RPK P+Y+ID + ++        ++S  FN
Sbjct: 59  CR-CVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTAFN 118

Query: 104 LSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNL 163
           +++ A NPN+KIGIYY  GS + +     ++S G LP F+Q  +N +++   + G   N 
Sbjct: 119 VTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQNA 178

Query: 164 SSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTA--AAKI 223
           +S       +     ++ L++ +  P+++K+G +K  K++  V C V+VD L A    ++
Sbjct: 179 TSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVIRV 238

Query: 224 VKKNCDYSVKI 233
              NC Y  ++
Sbjct: 239 RSSNCKYRFRL 248

[Close]

BLAST of Cucsa.142720 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-25
Identity = 71/234 (30.34%), Postives = 121/234 (51.71%), Query Frame = 1


Query: 2   SSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIIL 61
           ++P PG  V+ LP  +   +PPP    +           RN C      +L++L I +I 
Sbjct: 21  TTPAPGKTVL-LPVQR--PIPPPVIPSK----------NRNMCCKIFCWVLSLLVIALIA 80

Query: 62  LGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYLT 121
           L I +AV YFV  PK P+Y ++++ ++ L      ++S  F + + A NPN+KIGIYY  
Sbjct: 81  LAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEK 140

Query: 122 GSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQR--- 181
           G  + ++    KL EG +P F+Q  +NV+ L   + G      +   N ++  ++Q+   
Sbjct: 141 GGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTG-----RAQYGNTVLAALQQQQQT 200

Query: 182 -AVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVK 232
             V L +++  P+ +K+G++K  KI++  +C + VD L+    I  K  D S K
Sbjct: 201 GRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFK 236

[Close]

BLAST of Cucsa.142720 vs. NCBI nr
Match: gi|449452811|ref|XP_004144152.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 462.6 bits (1189), Expect = 4.1e-127
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII
Sbjct: 26  PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 85

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL 120
           LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL
Sbjct: 86  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSAISPVFNLSVRADNPNKKIGIYYL 145

Query: 121 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 180
           TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV
Sbjct: 146 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 205

Query: 181 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW
Sbjct: 206 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 258

[Close]

BLAST of Cucsa.142720 vs. NCBI nr
Match: gi|659100419|ref|XP_008451090.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 410.2 bits (1053), Expect = 2.4e-111
Identity = 205/236 (86.86%), Postives = 221/236 (93.64%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           P SPPPGTYVIQLPKDQIYR+PPPENAHRF+LYTRQ+ RRRN CRSCLFCLLAIL +LII
Sbjct: 26  PPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTRQNRRRRNPCRSCLFCLLAILILLII 85

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSS---AISPVFNLSVRADNPNKKIGI 120
           LLGIT+AVFY VVRPKSPNYSIDAIS+SGLN LTSS   AISP+FNL+VRADNPNKKIGI
Sbjct: 86  LLGITVAVFYLVVRPKSPNYSIDAISVSGLNLLTSSSSSAISPLFNLTVRADNPNKKIGI 145

Query: 121 YYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQ 180
           YYLTGSSVRIY SNEKLSEGVLPDFFQP+KNVSVLR+VVRG GVNLSSGAKN +IE VKQ
Sbjct: 146 YYLTGSSVRIYFSNEKLSEGVLPDFFQPAKNVSVLRSVVRGTGVNLSSGAKNGLIESVKQ 205

Query: 181 RAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           R V+LKVEIGVPIKVK+G+VKSWK++VKVNCDVTVDELT AAKIVKKNCDYSVKIW
Sbjct: 206 RVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTVDELTTAAKIVKKNCDYSVKIW 261

[Close]

BLAST of Cucsa.142720 vs. NCBI nr
Match: gi|920703488|gb|KOM46713.1| (hypothetical protein LR48_Vigan07g041700 [Vigna angularis])

HSP 1 Score: 256.1 bits (653), Expect = 5.8e-65
Identity = 125/233 (53.65%), Postives = 167/233 (71.67%), Query Frame = 1


Query: 4   PPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLG 63
           P PGTYVI++PKDQ+YR+PP ENA R+  YT + HRR +RC SC   L+ IL+ILI+LLG
Sbjct: 42  PSPGTYVIKIPKDQVYRVPPAENARRYDQYTHRKHRR-SRCCSCCCWLIGILSILIVLLG 101

Query: 64  ITLAVFYFVVRPKSPNYSIDAISISGLNNLTSS---AISPVFNLSVRADNPNKKIGIYYL 123
           I   +FY V RPK+P Y+I+ I+I G+N  + S   AISP FN++V+ADNPN KIGIYYL
Sbjct: 102 IAAGIFYLVFRPKAPKYTIEDIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYL 161

Query: 124 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 183
             SS  ++ ++ +L  G LP F QPS NV+V   V++G G+ L S  +  ++E   +R V
Sbjct: 162 KDSSAEVFYNDARLCNGALPAFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKV 221

Query: 184 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
            L V I  P+K+K+GSVK+WKI VK++CDVTV++LTA AKIV K CDY V +W
Sbjct: 222 PLTVRIRAPVKIKVGSVKTWKITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]

BLAST of Cucsa.142720 vs. NCBI nr
Match: gi|950987645|ref|XP_014503816.1| (PREDICTED: protein YLS9-like [Vigna radiata var. radiata])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 123/233 (52.79%), Postives = 166/233 (71.24%), Query Frame = 1


Query: 4   PPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILIILLG 63
           PPPGTYVI++PKDQ+YR+PP ENA R+  YT + HRR +RC  C   L+ IL ILI+LLG
Sbjct: 42  PPPGTYVIKIPKDQVYRVPPAENARRYDQYTHRKHRR-SRCCCCCCWLIGILFILIVLLG 101

Query: 64  ITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSA---ISPVFNLSVRADNPNKKIGIYYL 123
           I   +FY V RP++P Y+I+ I++ G+N  + S+   ISP FN++V+ADNPN KIGIYYL
Sbjct: 102 IAAGIFYLVFRPEAPKYTIEDIAVRGINVTSPSSDVTISPEFNVTVKADNPNDKIGIYYL 161

Query: 124 TGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQRAV 183
             SS  ++ ++ +L  G +P F QPS NV+V   V++G G+ L S  +  ++E   +R V
Sbjct: 162 KDSSAEVFYNDARLCNGAIPAFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKV 221

Query: 184 LLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
            L V I  P+K+K+GSVK+WKI VKV+CDVTV+ELTA AKIV K CDY V +W
Sbjct: 222 PLTVRIRAPVKIKVGSVKTWKITVKVDCDVTVNELTAQAKIVSKRCDYKVDLW 273

[Close]

BLAST of Cucsa.142720 vs. NCBI nr
Match: gi|1012362002|gb|KYP73185.1| (hypothetical protein KK1_005798 [Cajanus cajan])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 121/236 (51.27%), Postives = 171/236 (72.46%), Query Frame = 1


Query: 1   PSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTRQSHRRRNRCRSCLFCLLAILAILII 60
           PS  PP +YVI +PKDQIYR+PPPENA R+  YTR+ HR  NRC  CL  L+ ++ +L++
Sbjct: 35  PSQNPPVSYVIHIPKDQIYRVPPPENARRYDQYTRRKHRP-NRCCRCLCWLIGLIVVLVV 94

Query: 61  LLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTSSA---ISPVFNLSVRADNPNKKIGI 120
           LLGI   + Y V RP++PNY I++I++ G+N  ++SA   ISPVFN++V+ADNPN KIGI
Sbjct: 95  LLGIAAGILYLVFRPEAPNYGIESIAVRGINLTSASAAAAISPVFNVTVKADNPNDKIGI 154

Query: 121 YYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLRAVVRGAGVNLSSGAKNEIIEWVKQ 180
           +YL  S   ++ ++ +LS G LP F+QPS NV+V R V++G G+ L S  +  ++  V +
Sbjct: 155 HYLKDSHAEVFYADVELSNGALPAFYQPSNNVTVFRTVLKGNGIVLRSEDRRALVNAVTK 214

Query: 181 RAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVDELTAAAKIVKKNCDYSVKIW 234
           + V L V I  P+K+K+GSVK+WKI V+V+CDVTV+ LTA AKIV K+C+Y V +W
Sbjct: 215 QKVPLTVRIRAPVKIKVGSVKTWKITVRVDCDVTVNALTANAKIVSKHCNYGVDLW 269

The following BLAST results are available for this feature:

BLAST of Cucsa.142720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YLS9_ARATH	4.6e-14	25.81	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
NHL3_ARATH	3.3e-12	27.70	NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1	[more]

BLAST of Cucsa.142720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX01_CUCSA	2.8e-127	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601000 PE=4 SV=1	[more]
A0A0S3RK74_PHAAN	4.0e-65	53.65	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G055600 PE=...	[more]
A0A0L9UVC0_PHAAN	4.0e-65	53.65	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g041700 PE=4 SV=1	[more]
A0A151U1M3_CAJCA	1.2e-64	51.27	Uncharacterized protein OS=Cajanus cajan GN=KK1_005798 PE=4 SV=1	[more]
B9HQ55_POPTR	3.4e-64	51.07	Harpin-induced family protein OS=Populus trichocarpa GN=POPTR_0009s16050g PE=4 S...	[more]

BLAST of Cucsa.142720 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27080.1	8.0e-65	49.78	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G21130.1	1.9e-50	40.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G65690.1	2.3e-27	30.46	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G36970.1	3.3e-26	30.37	NDR1/HIN1-like 25	[more]
AT1G54540.1	3.6e-25	30.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Cucsa.142720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452811\|ref\|XP_004144152.1\|	4.1e-127	100.00	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659100419\|ref\|XP_008451090.1\|	2.4e-111	86.86	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|920703488\|gb\|KOM46713.1\|	5.8e-65	53.65	hypothetical protein LR48_Vigan07g041700 [Vigna angularis]	[more]
gi\|950987645\|ref\|XP_014503816.1\|	1.7e-64	52.79	PREDICTED: protein YLS9-like [Vigna radiata var. radiata]	[more]
gi\|1012362002\|gb\|KYP73185.1\|	1.7e-64	51.27	hypothetical protein KK1_005798 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.142720.1	Cucsa.142720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 106..208 score: 6.6
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 1..233 score: 1.2E
None	No IPR available	PANTHER	PTHR31852:SF0	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 1..233 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.142720	Cla011071	Watermelon (97103) v1	cgywmB251
Cucsa.142720	Csa1G601000	Cucumber (Chinese Long) v2	cgycuB205
Cucsa.142720	MELO3C015630	Melon (DHL92) v3.5.1	cgymeB238
Cucsa.142720	ClCG03G014140	Watermelon (Charleston Gray)	cgywcgB242
Cucsa.142720	CSPI01G29680	Wild cucumber (PI 183967)	cgycpiB208
Cucsa.142720	CmaCh10G009770	Cucurbita maxima (Rimu)	cgycmaB0395
Cucsa.142720	CmaCh11G008120	Cucurbita maxima (Rimu)	cgycmaB0396
Cucsa.142720	CmaCh20G000170	Cucurbita maxima (Rimu)	cgycmaB0398
Cucsa.142720	CmaCh02G011860	Cucurbita maxima (Rimu)	cgycmaB0399
Cucsa.142720	CmoCh02G012190	Cucurbita moschata (Rifu)	cgycmoB0399
Cucsa.142720	CmoCh20G000130	Cucurbita moschata (Rifu)	cgycmoB0398
Cucsa.142720	CmoCh11G008150	Cucurbita moschata (Rifu)	cgycmoB0396
Cucsa.142720	CmoCh10G010290	Cucurbita moschata (Rifu)	cgycmoB0395
Cucsa.142720	Lsi06G004390	Bottle gourd (USVL1VR-Ls)	cgylsiB230
Cucsa.142720	Cp4.1LG04g11720	Cucurbita pepo (Zucchini)	cgycpeB0385
Cucsa.142720	Cp4.1LG05g05480	Cucurbita pepo (Zucchini)	cgycpeB0386
Cucsa.142720	Cp4.1LG18g01210	Cucurbita pepo (Zucchini)	cgycpeB0382
Cucsa.142720	MELO3C015630.2	Melon (DHL92) v3.6.1	cgymedB235
Cucsa.142720	CsaV3_1G042120	Cucumber (Chinese Long) v3	cgycucB213
Cucsa.142720	Cla97C03G064320	Watermelon (97103) v2	cgywmbB241
Cucsa.142720	Bhi02G001408	Wax gourd	cgywgoB280
Cucsa.142720	Carg02772	Silver-seed gourd	carcgyB1039
Cucsa.142720	Carg06962	Silver-seed gourd	carcgyB0599
Cucsa.142720	Carg16979	Silver-seed gourd	carcgyB0539
Cucsa.142720	Carg18010	Silver-seed gourd	carcgyB0212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.142720	Wax gourd	cgywgoB282