CmaCh02G011860 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G011860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cma_Chr02 : 7026015 .. 7026779 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAACGTGTTCACCCCACTGACTCCGATGCTGCTTCTGCACACTCCGGCGATGCTATCCCTCCCAAGAACCCTCCTCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAAGTCTACCGAGTTCCTCCTCCCGAAAATGCTACCCGCTTCGATCTCTACTCTCGACGGAACACCCGCCCCTCCCTCTGCCGCCGATTTCTCTGCTCCGTTCTCCTCCTCATCACCATACTCCTCCTCCTTTTCGCCATTGTTTCCGGCCTCTTCTTCTTAATCCTCCAACCTCTCTCTCCTCGCTTCTCCATTCTCGCCATCTCCACCAAGGGGATGCAGATCAAGCCGAACGCCTCAATTTCTCCCCAATTTAACGTCACTGTTCGAGCCGAAAACCCTAACAAAAAAATCGGAATCTACTACGAGAGAAACAGCAACATTAGCGTCAATTTCGGGGATGTAATGTTGTGCAAAGGCGCATTGCCGGCGTTGTATCAGCCGTGGAGAAATGTGACGGTTATGGCGGCAAAGCTTAAAGGATCTGGCATCAAATTGTCGAGCAGTGCTGTGAAAGCATTGAAGGATTCAGAGAAGCAGGGGAAAGTGAAATTGAAGGTGGATTTAAGAGCTCCGATTAAGATGAAATTATACTGGATGAAGACATGGACGATTAGGGCAAAAGTATCGTGCGAGATTTGGGTGAAAAAGGTAACGGGGGAGGCGAAGGCGACGGAGAAGAAGTGCGAGCATAGCTTGAAGCTGTGGTAG

mRNA sequence

ATGGCCGAACGTGTTCACCCCACTGACTCCGATGCTGCTTCTGCACACTCCGGCGATGCTATCCCTCCCAAGAACCCTCCTCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAAGTCTACCGAGTTCCTCCTCCCGAAAATGCTACCCGCTTCGATCTCTACTCTCGACGGAACACCCGCCCCTCCCTCTGCCGCCGATTTCTCTGCTCCGTTCTCCTCCTCATCACCATACTCCTCCTCCTTTTCGCCATTGTTTCCGGCCTCTTCTTCTTAATCCTCCAACCTCTCTCTCCTCGCTTCTCCATTCTCGCCATCTCCACCAAGGGGATGCAGATCAAGCCGAACGCCTCAATTTCTCCCCAATTTAACGTCACTGTTCGAGCCGAAAACCCTAACAAAAAAATCGGAATCTACTACGAGAGAAACAGCAACATTAGCGTCAATTTCGGGGATGTAATGTTGTGCAAAGGCGCATTGCCGGCGTTGTATCAGCCGTGGAGAAATGTGACGGTTATGGCGGCAAAGCTTAAAGGATCTGGCATCAAATTGTCGAGCAGTGCTGTGAAAGCATTGAAGGATTCAGAGAAGCAGGGGAAAGTGAAATTGAAGGTGGATTTAAGAGCTCCGATTAAGATGAAATTATACTGGATGAAGACATGGACGATTAGGGCAAAAGTATCGTGCGAGATTTGGGTGAAAAAGGTAACGGGGGAGGCGAAGGCGACGGAGAAGAAGTGCGAGCATAGCTTGAAGCTGTGGTAG

Coding sequence (CDS)

ATGGCCGAACGTGTTCACCCCACTGACTCCGATGCTGCTTCTGCACACTCCGGCGATGCTATCCCTCCCAAGAACCCTCCTCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAAGTCTACCGAGTTCCTCCTCCCGAAAATGCTACCCGCTTCGATCTCTACTCTCGACGGAACACCCGCCCCTCCCTCTGCCGCCGATTTCTCTGCTCCGTTCTCCTCCTCATCACCATACTCCTCCTCCTTTTCGCCATTGTTTCCGGCCTCTTCTTCTTAATCCTCCAACCTCTCTCTCCTCGCTTCTCCATTCTCGCCATCTCCACCAAGGGGATGCAGATCAAGCCGAACGCCTCAATTTCTCCCCAATTTAACGTCACTGTTCGAGCCGAAAACCCTAACAAAAAAATCGGAATCTACTACGAGAGAAACAGCAACATTAGCGTCAATTTCGGGGATGTAATGTTGTGCAAAGGCGCATTGCCGGCGTTGTATCAGCCGTGGAGAAATGTGACGGTTATGGCGGCAAAGCTTAAAGGATCTGGCATCAAATTGTCGAGCAGTGCTGTGAAAGCATTGAAGGATTCAGAGAAGCAGGGGAAAGTGAAATTGAAGGTGGATTTAAGAGCTCCGATTAAGATGAAATTATACTGGATGAAGACATGGACGATTAGGGCAAAAGTATCGTGCGAGATTTGGGTGAAAAAGGTAACGGGGGAGGCGAAGGCGACGGAGAAGAAGTGCGAGCATAGCTTGAAGCTGTGGTAG

Protein sequence

MAERVHPTDSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVKKVTGEAKATEKKCEHSLKLW

Homology

[Close]

BLAST of CmaCh02G011860 vs. TrEMBL
Match: A0A0A0L0D0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269730 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.0e-77
Identity = 167/258 (64.73%), Postives = 201/258 (77.91%), Query Frame = 1


Query: 1   MAERVHPT-DSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRN 60
           MA+RVHPT + D+AS +     P K+PP  TYVIQ+PKDQVYR+PPPENA RF+LY+R +
Sbjct: 1   MADRVHPTLNPDSASNN-----PLKSPPSATYVIQIPKDQVYRIPPPENAARFNLYTRHH 60

Query: 61  TRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNA-S 120
            RPS CRRFLC +LLL    LLL AI S L FLILQP  PRFSILA+S    +IKPN  S
Sbjct: 61  HRPSPCRRFLCFILLL----LLLSAITSALVFLILQPDLPRFSILAVSIS--RIKPNTTS 120

Query: 121 ISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLK 180
            SPQFNVT+RAEN NK IGIYYE+NS +S+N  DVMLC+GALP LYQP RNVTVM  K+K
Sbjct: 121 FSPQFNVTIRAENHNKNIGIYYEKNSTVSMNLSDVMLCEGALPLLYQPPRNVTVMRVKVK 180

Query: 181 GSGIKLSSSAVKALKDSEKQGK-VKLKVDLRAPIKMKLYWMK-TWTIRAKVSCEIWVKKV 240
           GSGI+LSSS  KA +D EK+GK +++KVD+R P+KMKLYWM+  W IRAKV+C+I VKK 
Sbjct: 181 GSGIRLSSSTGKAFEDWEKEGKTLRMKVDVRGPMKMKLYWMEMRWRIRAKVTCKILVKKE 240

Query: 241 TGEAKATEKKCEHSLKLW 255
            G+ K  E+KC+HS+KLW
Sbjct: 241 MGKTKVMEEKCDHSMKLW 247

[Close]

BLAST of CmaCh02G011860 vs. TrEMBL
Match: M5W0N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010043mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 126/266 (47.37%), Postives = 179/266 (67.29%), Query Frame = 1


Query: 1   MAERVHPTDS----DAASAHSGDAIPPKN----PPPGTYVIQLPKDQVYRVPPPENATRF 60
           MA+RVHP DS    +          PP +    PPPGTYVIQ+PKDQVYRVPPPENA+R+
Sbjct: 1   MADRVHPRDSPFHTETTPLSLSRPSPPDSEKPVPPPGTYVIQIPKDQVYRVPPPENASRY 60

Query: 61  DLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQ 120
             Y+ R TR S C    C  L L+  ++ L A  +G+F+L+++P +P +S+ +I+ KG  
Sbjct: 61  QSYTHRKTRRSSCHCCCCWFLGLLAAIVFLSAAAAGIFYLVVRPEAPNYSVESIAFKGFN 120

Query: 121 I----KPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWR 180
           +     P ++ISP+ +VTVRA+NPNKKIGIYYER S++ + + D+ LC G LPA YQP +
Sbjct: 121 LTTTSSPPSAISPEIHVTVRAQNPNKKIGIYYERESSVKLFYSDIKLCDGVLPAFYQPSK 180

Query: 181 NVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVS 240
           NVT     L GSGI+L+S+  K L D++KQGKV L++DLRAP+++K+  +KTWTI  KV+
Sbjct: 181 NVTEFRTALTGSGIELTSAVQKGLVDAQKQGKVPLELDLRAPVRIKVGPIKTWTITVKVA 240

Query: 241 CEIWVKKVTGEAKATEKKCEHSLKLW 255
           C + V K+T +A    + C++S+  W
Sbjct: 241 CHLTVNKLTADANIVSRDCDYSVDPW 266

[Close]

BLAST of CmaCh02G011860 vs. TrEMBL
Match: A0A061GWS9_THECC (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putative isoform 1 OS=Theobroma cacao GN=TCM_042018 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.5e-57
Identity = 121/260 (46.54%), Postives = 174/260 (66.92%), Query Frame = 1


Query: 1   MAERVHPTDS-DAASAHSGDAIPPKNPP-----PGTYVIQLPKDQVYRVPPPENATRFDL 60
           MAE+VHP DS +  +  S   + P +P      PGTYVIQ+PKDQ+YRVPPPENA R+  
Sbjct: 1   MAEQVHPGDSPNVTNEQSAPKLAPPSPEKPVPQPGTYVIQIPKDQIYRVPPPENARRYAH 60

Query: 61  YSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIK 120
            S+R      CR   C +L +I +LLL  AI + + + + +P SP +S+ +++ KG+ + 
Sbjct: 61  LSKRKASGGTCRSCCCCLLTVILVLLLSAAIAAAVVYFVFKPESPNYSVESVAIKGLNLT 120

Query: 121 PNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMA 180
             + +SP+F+VTVRA NPN KIGIYYE+ S++ V + DV LC GALPA YQP  NVTV  
Sbjct: 121 SASPLSPEFDVTVRAHNPNDKIGIYYEKGSSVKVYYEDVNLCNGALPAFYQPTNNVTVFQ 180

Query: 181 AKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVK 240
             LKGSGI+L+++A++AL D++ +G V   + LRAP+K+K+  +KTW I AKV+C+I V 
Sbjct: 181 TALKGSGIELTNTALRALSDAQNKGTVPFTLKLRAPVKIKVGSIKTWKITAKVTCKITVD 240

Query: 241 KVTGEAKATEKKCEHSLKLW 255
            +T  +K   K C++ + LW
Sbjct: 241 NLTATSKIVSKDCDYGVDLW 260

[Close]

BLAST of CmaCh02G011860 vs. TrEMBL
Match: W9R547_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022546 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.6e-57
Identity = 129/267 (48.31%), Postives = 178/267 (66.67%), Query Frame = 1


Query: 1   MAERVHPT-DSDAASA-------HSGDAIPPKN----PPPGTYVIQLPKDQVYRVPPPEN 60
           MA+RV+P+ D + AS+       H    IPP      PPPGTYVIQ+PKDQVYR+PPPEN
Sbjct: 1   MADRVYPSGDQETASSTPQNSSEHPLRPIPPSPEKPVPPPGTYVIQIPKDQVYRIPPPEN 60

Query: 61  ATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAIST 120
           A RF  YSRR +R S C   LCS+L  I +L +L  I + + +L+ +P SP +SI  I+ 
Sbjct: 61  ARRFQNYSRRKSRRSKCGLCLCSLLGSIVVLAILAGISAAVLYLVFRPESPNYSIDDIAI 120

Query: 121 KGMQIKPN-ASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPW 180
           KG+    + A ISP  +V +RA+NPN  IGI+Y ++S+++V + DV LC GA+PA +QP 
Sbjct: 121 KGINTTASSAEISPAIDVVLRAKNPNDNIGIFYGKDSSVTVYYSDVELCNGAMPAFHQPS 180

Query: 181 RNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKV 240
            NVTV    L G GI+L++S  KAL+DSEK+GKV LK++++AP+K K+  +KTWT+  K 
Sbjct: 181 NNVTVFKTALTGPGIELTASMKKALRDSEKKGKVPLKLNMKAPVKFKVGSVKTWTLAVKF 240

Query: 241 SCEIWVKKVTGEAKATEKKCEHSLKLW 255
            C++ V K+T EAK   K CE+  K W
Sbjct: 241 RCDVTVDKLTAEAKIVSKDCEYGWKFW 267

[Close]

BLAST of CmaCh02G011860 vs. TrEMBL
Match: A0A067LFL5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23841 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.4e-57
Identity = 128/271 (47.23%), Postives = 174/271 (64.21%), Query Frame = 1


Query: 1   MAERVHPTDSDAASAH---SGDAIP-------------PKNPPP-GTYVIQLPKDQVYRV 60
           MAERVHP DS  +S     +  A P             P +PPP GTYVIQ+PKDQVYRV
Sbjct: 1   MAERVHPRDSPPSSTELKKTPSASPDRPLKPAAPLLEKPVSPPPAGTYVIQIPKDQVYRV 60

Query: 61  PPPENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSI 120
           PPPENA R+   SRR  R S C   LC    L+   +LL AI +G+ +L+ +P +P++SI
Sbjct: 61  PPPENAKRYQQLSRRKHRRSTCCCCLCWFFGLLFTFILLAAIAAGVLYLVFRPEAPKYSI 120

Query: 121 LAISTKGMQIKPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPAL 180
            ++S KG  +  +A +SP+F+V VRA NPN KIGIYY   S+++V + DV LC G LP  
Sbjct: 121 ESVSIKGFNLTSSAPLSPEFDVAVRAHNPNNKIGIYYRTGSSVNVYYNDVRLCNGKLPVF 180

Query: 181 YQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTI 240
           YQ   NVTV  A LKGSGI+L+S+  KAL   E +G V  K++LRAP+++K+  +KTWTI
Sbjct: 181 YQGTNNVTVFVASLKGSGIELTSAVHKALISGETKGAVPFKLNLRAPVRIKVGSLKTWTI 240

Query: 241 RAKVSCEIWVKKVTGEAKATEKKCEHSLKLW 255
             KV C++ V K+T ++K   K C++ ++LW
Sbjct: 241 TVKVDCDVTVDKLTSKSKLVSKHCDYGVELW 271

[Close]

BLAST of CmaCh02G011860 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-54
Identity = 111/260 (42.69%), Postives = 160/260 (61.54%), Query Frame = 1


Query: 1   MAERVHPTDSDAASAH------SGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDL 60
           MAERV+P DS   S        SG+      PPP TYVIQ+PKDQ+YR+PPPENA RF+ 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIK 120
            SR+ T  S CR   CS L  + IL++L  I   + +LI +P +P++SI   S  G+ + 
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLN 120

Query: 121 PNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMA 180
             + ISP FNVTVR+ N N KIG+YYE+ S++ V + DV +  G +P  YQP +NVTV+ 
Sbjct: 121 STSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVK 180

Query: 181 AKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVK 240
             L GS I+L+S   K +++   +  V  K+ ++AP+K+K   +KTWT+   V C++ V 
Sbjct: 181 LVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVD 240

Query: 241 KVTGEAKATEKKCEHSLKLW 255
           K+T  ++   +KC H + LW
Sbjct: 241 KLTAPSRIVSRKCSHDVDLW 260

[Close]

BLAST of CmaCh02G011860 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 188.0 bits (476), Expect = 7.4e-48
Identity = 106/252 (42.06%), Postives = 153/252 (60.71%), Query Frame = 1


Query: 6   HP---TDSDAASAHSGDAIPPK-NPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRNTR 65
           HP   T+  ++S +S D+   +  PPPGTYVI+LPKDQ+YRVPPPENA R++  SRR T 
Sbjct: 29  HPSLDTNDSSSSRYSVDSQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRKTN 88

Query: 66  PSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNASISP 125
            S CRR LC  L  + I+++L AI  G F+L+ QP  P+FS+  +S  G+ +  ++  SP
Sbjct: 89  KSCCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSP 148

Query: 126 QFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLKGSG 185
              + +R++N   K+G+ YE+ +   V F    L  G   A  QP  NVTV+   LKGS 
Sbjct: 149 VIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSS 208

Query: 186 IKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVKKVTGEAK 245
           +KL SS+ K L +S+K+GKV   + ++AP+K K+  + TWT+   V C+I V K+T  A 
Sbjct: 209 VKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTASAT 268

Query: 246 ATEKKCEHSLKL 254
              + CE  L L
Sbjct: 269 VKTENCETGLSL 280

[Close]

BLAST of CmaCh02G011860 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 94.7 bits (234), Expect = 8.5e-20
Identity = 70/227 (30.84%), Postives = 116/227 (51.10%), Query Frame = 1


Query: 26  PPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAI 85
           P PG  V+ LP  +   +PPP   ++      RN    +C +  C VL L+ I L+  AI
Sbjct: 23  PAPGKTVL-LPVQRP--IPPPVIPSK-----NRN----MCCKIFCWVLSLLVIALIALAI 82

Query: 86  VSGLFFLILQPLSPRFSILAISTKGMQIKPNASISPQFNVTVRAENPNKKIGIYYERNSN 145
              + + +  P  P + + ++    + I  + S+S +F V + A NPN+KIGIYYE+  +
Sbjct: 83  AVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEKGGH 142

Query: 146 ISVNFGDVMLCKGALPALYQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKV 205
           I V +    LC+G +P  YQ  RNVT +   L G   +  ++ + AL+  ++ G+V L +
Sbjct: 143 IGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGRA-QYGNTVLAALQQQQQTGRVPLDL 202

Query: 206 DLRAPIKMKLYWMKTWTIRAKVSCEIWVKKVTGEAKATEKKCEHSLK 253
            + AP+ +KL  +K   IR   SC++ V  ++       K  + S K
Sbjct: 203 KVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDCSFK 236

[Close]

BLAST of CmaCh02G011860 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 94.7 bits (234), Expect = 8.5e-20
Identity = 63/253 (24.90%), Postives = 119/253 (47.04%), Query Frame = 1


Query: 3   ERVHPTDSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRNTRP 62
           +++HP     A  H    + P+      +       Q   + PP          ++ +R 
Sbjct: 5   QKIHPVSDPEAPPHPTAPLVPRGSSRSEHGDPTKTQQAAPLDPPRE--------KKGSRS 64

Query: 63  SLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNASISPQ 122
             CR  +C  LL++ +L+++   + G+ +L+ +P  P ++I  +     Q+  + S+S  
Sbjct: 65  CWCR-CVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLSTA 124

Query: 123 FNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLKGSGI 182
           FNVT+ A+NPN+KIGIYYE  S ISV +    +  G+LP  YQ   N T++  ++ G   
Sbjct: 125 FNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIILVEMTGFTQ 184

Query: 183 KLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVKKVTGEA-- 242
             +S      +     G + L++ +  P+++KL  +K   +R  V C + V  +   +  
Sbjct: 185 NATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVDSLAANSVI 244

Query: 243 KATEKKCEHSLKL 254
           +     C++  +L
Sbjct: 245 RVRSSNCKYRFRL 248

[Close]

BLAST of CmaCh02G011860 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-18
Identity = 65/254 (25.59%), Postives = 120/254 (47.24%), Query Frame = 1


Query: 3   ERVHPT-DSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRNTR 62
           ++++P  D +AA+A     + P+      +          +VP  +   RF   +    R
Sbjct: 5   QKIYPVQDPEAATARPTAPLVPRGSSRSEH------GDPSKVPLNQRPQRFVPLAPPKKR 64

Query: 63  PSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNASISP 122
            S C R  C     + +L++      G+ +L+ +P  P +SI  +      +  ++S++ 
Sbjct: 65  RSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSLTT 124

Query: 123 QFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLKGSG 182
            FNVT+ A+NPN+KIGIYYE  S I+V + +  L  G+LP  YQ   N TV+  ++ G  
Sbjct: 125 AFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQT 184

Query: 183 IKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWTIRAKVSCEIWVKKV--TGE 242
              S       +  ++ G + L++ +  P+++K   +K + +R  V C ++V  +     
Sbjct: 185 QNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATNNV 244

Query: 243 AKATEKKCEHSLKL 254
            K     C+  L+L
Sbjct: 245 IKIQSSSCKFRLRL 252

[Close]

BLAST of CmaCh02G011860 vs. NCBI nr
Match: gi|659097879|ref|XP_008449864.1| (PREDICTED: uncharacterized protein LOC103491613 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 1.1e-80
Identity = 171/257 (66.54%), Postives = 202/257 (78.60%), Query Frame = 1


Query: 1   MAERVHPT-DSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRN 60
           MA+RVHPT + D+AS +      PK PP  TYVIQ+PKDQVYR+PPPENA RF+LY+R N
Sbjct: 1   MADRVHPTVNPDSASNN------PKGPPSATYVIQIPKDQVYRIPPPENAARFNLYTRHN 60

Query: 61  TRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNA-S 120
            RPS CRRFLC +LLL    L L AI S LFFLILQP  PR+SILA+S    +IK N  S
Sbjct: 61  QRPSSCRRFLCFILLL----LFLSAITSALFFLILQPDLPRYSILAVSIS--RIKSNTTS 120

Query: 121 ISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLK 180
           ISPQ NVT+RAEN NKKIGIYYE+NS +SV+  DVMLC+GALP LYQP  NVTV+A K+K
Sbjct: 121 ISPQLNVTIRAENHNKKIGIYYEKNSIVSVSLSDVMLCEGALPLLYQPPSNVTVIAVKMK 180

Query: 181 GSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKT-WTIRAKVSCEIWVKKVT 240
           GSGI+LSSS  KALKD EK+G+V+LKVD+RAPI+MKLYWMK  W IR KV+C+I VKKV 
Sbjct: 181 GSGIRLSSSTGKALKDWEKEGRVRLKVDVRAPIEMKLYWMKVRWRIRGKVTCKILVKKVM 240

Query: 241 GEAKATEKKCEHSLKLW 255
           G+ K  E+KC+HS+KLW
Sbjct: 241 GKTKVMEEKCDHSMKLW 245

[Close]

BLAST of CmaCh02G011860 vs. NCBI nr
Match: gi|449463891|ref|XP_004149664.1| (PREDICTED: uncharacterized protein LOC101202799 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.4e-77
Identity = 167/258 (64.73%), Postives = 201/258 (77.91%), Query Frame = 1


Query: 1   MAERVHPT-DSDAASAHSGDAIPPKNPPPGTYVIQLPKDQVYRVPPPENATRFDLYSRRN 60
           MA+RVHPT + D+AS +     P K+PP  TYVIQ+PKDQVYR+PPPENA RF+LY+R +
Sbjct: 1   MADRVHPTLNPDSASNN-----PLKSPPSATYVIQIPKDQVYRIPPPENAARFNLYTRHH 60

Query: 61  TRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILAISTKGMQIKPNA-S 120
            RPS CRRFLC +LLL    LLL AI S L FLILQP  PRFSILA+S    +IKPN  S
Sbjct: 61  HRPSPCRRFLCFILLL----LLLSAITSALVFLILQPDLPRFSILAVSIS--RIKPNTTS 120

Query: 121 ISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPALYQPWRNVTVMAAKLK 180
            SPQFNVT+RAEN NK IGIYYE+NS +S+N  DVMLC+GALP LYQP RNVTVM  K+K
Sbjct: 121 FSPQFNVTIRAENHNKNIGIYYEKNSTVSMNLSDVMLCEGALPLLYQPPRNVTVMRVKVK 180

Query: 181 GSGIKLSSSAVKALKDSEKQGK-VKLKVDLRAPIKMKLYWMK-TWTIRAKVSCEIWVKKV 240
           GSGI+LSSS  KA +D EK+GK +++KVD+R P+KMKLYWM+  W IRAKV+C+I VKK 
Sbjct: 181 GSGIRLSSSTGKAFEDWEKEGKTLRMKVDVRGPMKMKLYWMEMRWRIRAKVTCKILVKKE 240

Query: 241 TGEAKATEKKCEHSLKLW 255
            G+ K  E+KC+HS+KLW
Sbjct: 241 MGKTKVMEEKCDHSMKLW 247

[Close]

BLAST of CmaCh02G011860 vs. NCBI nr
Match: gi|658047026|ref|XP_008359184.1| (PREDICTED: protein NDR1-like [Malus domestica])

HSP 1 Score: 241.1 bits (614), Expect = 2.1e-60
Identity = 131/272 (48.16%), Postives = 184/272 (67.65%), Query Frame = 1


Query: 1   MAERVHPTDSDAASA-----HSGDA------IPPKN----PPPGTYVIQLPKDQVYRVPP 60
           MA+RVHP  S + +      H+          PP++    PPPGTYVIQ+PKDQVYRVPP
Sbjct: 1   MADRVHPRGSPSHNETTQFPHTSSPQSTRTPSPPESEKLVPPPGTYVIQIPKDQVYRVPP 60

Query: 61  PENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILA 120
           PENATR+  Y R+N R S CR   C +  L+  L+LL A  +G+F+L+++P SP +SI +
Sbjct: 61  PENATRYKNYXRQNPRRSSCRCCFCWLFGLVAALILLSAAAAGIFYLVVRPESPNYSIES 120

Query: 121 ISTKGMQI---KPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPA 180
           I+ KG  +    P+++ISP+  VTVR +NPNKKIGIYY + +++ + + D+ LC GALPA
Sbjct: 121 IAFKGFHLTTPSPSSTISPEIQVTVRVQNPNKKIGIYYGKKNSVKLFYSDIKLCDGALPA 180

Query: 181 LYQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWT 240
            YQP +NVT     LKGSGIKL+S+  + L D+++QGKV LK+DLR P+++K+  +KTWT
Sbjct: 181 FYQPSKNVTEFRTALKGSGIKLTSTVQQGLVDAQRQGKVPLKLDLRMPVRIKVGAIKTWT 240

Query: 241 IRAKVSCEIWVKKVTGEAKATEKKCEHSLKLW 255
           I  KV C++ V K+T EAK   K C++S+  W
Sbjct: 241 ITVKVGCDLTVDKLTTEAKIVSKDCDYSVDPW 272

[Close]

BLAST of CmaCh02G011860 vs. NCBI nr
Match: gi|658061062|ref|XP_008366385.1| (PREDICTED: protein NDR1-like [Malus domestica])

HSP 1 Score: 240.0 bits (611), Expect = 4.6e-60
Identity = 131/274 (47.81%), Postives = 182/274 (66.42%), Query Frame = 1


Query: 1   MAERVHPTD-----SDAASAHSGDAIPPKNP----------PPGTYVIQLPKDQVYRVPP 60
           MA+RVHP D       A   ++     P+ P          PPGTYVIQ+PKDQVYRVPP
Sbjct: 1   MADRVHPRDPPLHNETAPFPYTXSPESPRKPSPPESEKPVPPPGTYVIQIPKDQVYRVPP 60

Query: 61  PENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILA 120
           PENATR+  Y+R+N R S CR   C +  L+  L+ L A  +G+F+L+++P SP +SI +
Sbjct: 61  PENATRYKNYTRQNPRRSSCRCCFCWLFGLVAALIFLSAAAAGIFYLVVRPKSPNYSIDS 120

Query: 121 ISTKGMQI-----KPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGAL 180
           I+ +G  +      P+ +ISP+  VTVRA+NPNKKIGIYY + S++ + + DV LC GAL
Sbjct: 121 IAFRGFNLTAPSPSPSYAISPEIQVTVRAQNPNKKIGIYYGKKSSVXLFYSDVKLCDGAL 180

Query: 181 PALYQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKT 240
           PA YQP +NVTV    LKGSGI+L+S+A + L D++KQGKV L +D+R P+++K+  +KT
Sbjct: 181 PAFYQPLKNVTVFQTALKGSGIELTSAAQQGLVDAQKQGKVPLGLDIRMPVRIKVGPIKT 240

Query: 241 WTIRAKVSCEIWVKKVTGEAKATEKKCEHSLKLW 255
           WTI  KV C++ V K+T EAK   K C++S+  W
Sbjct: 241 WTINVKVGCDLTVDKLTTEAKIVSKDCDYSVDPW 274

[Close]

BLAST of CmaCh02G011860 vs. NCBI nr
Match: gi|694450781|ref|XP_009350715.1| (PREDICTED: protein YLS9-like [Pyrus x bretschneideri])

HSP 1 Score: 238.8 bits (608), Expect = 1.0e-59
Identity = 132/272 (48.53%), Postives = 182/272 (66.91%), Query Frame = 1


Query: 1   MAERVHPTDSD-----------AASAHSGDAIPPKN----PPPGTYVIQLPKDQVYRVPP 60
           MA+RVHP DS            ++S       PP++    P PGTYVIQ+PKDQVYRVPP
Sbjct: 1   MADRVHPRDSPLHNETAPFPYTSSSESPRKPSPPESEKPVPSPGTYVIQIPKDQVYRVPP 60

Query: 61  PENATRFDLYSRRNTRPSLCRRFLCSVLLLITILLLLFAIVSGLFFLILQPLSPRFSILA 120
           PENATR+  Y+R+N R S CR   C    L+  L+LL A  +G+F+L+++P SP +SI +
Sbjct: 61  PENATRYKNYTRQNPRRSSCRCCFCWFFGLVAALILLSAAAAGIFYLVVRPKSPNYSIDS 120

Query: 121 ISTKGMQI---KPNASISPQFNVTVRAENPNKKIGIYYERNSNISVNFGDVMLCKGALPA 180
           I+ +G  +    P+ +ISP+  VTVRA+NPNKKIGIYY + S++ + + D  LC GALPA
Sbjct: 121 IAFRGFNLTAPSPSYAISPEIQVTVRAQNPNKKIGIYYGKKSSVKLFYSDGKLCDGALPA 180

Query: 181 LYQPWRNVTVMAAKLKGSGIKLSSSAVKALKDSEKQGKVKLKVDLRAPIKMKLYWMKTWT 240
            YQP  NVTV    LKGSGI+L+S+A + L D++KQGKV L +D+R P+++K+  +KTWT
Sbjct: 181 FYQPSSNVTVFRTALKGSGIELTSTAQQGLVDAQKQGKVPLGLDIRMPVRIKVGPIKTWT 240

Query: 241 IRAKVSCEIWVKKVTGEAKATEKKCEHSLKLW 255
           I  KV C++ V K+T EAK   K C++S+  W
Sbjct: 241 INVKVGCDLTVDKLTTEAKIVSKDCDYSVDPW 272

The following BLAST results are available for this feature:

BLAST of CmaCh02G011860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh02G011860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0D0_CUCSA	1.0e-77	64.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269730 PE=4 SV=1	[more]
M5W0N4_PRUPE	1.2e-59	47.37	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010043mg PE=4 SV=1	[more]
A0A061GWS9_THECC	1.5e-57	46.54	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family, putat...	[more]
W9R547_9ROSA	2.6e-57	48.31	Uncharacterized protein OS=Morus notabilis GN=L484_022546 PE=4 SV=1	[more]
A0A067LFL5_JATCU	4.4e-57	47.23	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23841 PE=4 SV=1	[more]

BLAST of CmaCh02G011860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27080.1	5.3e-54	42.69	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G21130.1	7.4e-48	42.06	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT1G54540.1	8.5e-20	30.84	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G36970.1	8.5e-20	24.90	NDR1/HIN1-like 25	[more]
AT1G65690.1	2.7e-18	25.59	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmaCh02G011860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097879\|ref\|XP_008449864.1\|	1.1e-80	66.54	PREDICTED: uncharacterized protein LOC103491613 [Cucumis melo]	[more]
gi\|449463891\|ref\|XP_004149664.1\|	1.4e-77	64.73	PREDICTED: uncharacterized protein LOC101202799 [Cucumis sativus]	[more]
gi\|658047026\|ref\|XP_008359184.1\|	2.1e-60	48.16	PREDICTED: protein NDR1-like [Malus domestica]	[more]
gi\|658061062\|ref\|XP_008366385.1\|	4.6e-60	47.81	PREDICTED: protein NDR1-like [Malus domestica]	[more]
gi\|694450781\|ref\|XP_009350715.1\|	1.0e-59	48.53	PREDICTED: protein YLS9-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G011860.1	CmaCh02G011860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 126..229 score: 4.3
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 23..254 score: 2.3
None	No IPR available	PANTHER	PTHR31852:SF0	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN	coord: 23..254 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G011860	Cucsa.142720	Cucumber (Gy14) v1	cgycmaB0399
CmaCh02G011860	CSPI01G29680	Wild cucumber (PI 183967)	cmacpiB583
CmaCh02G011860	CmoCh10G010290	Cucurbita moschata (Rifu)	cmacmoB573
CmaCh02G011860	CmoCh02G012190	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G011860	Cp4.1LG05g05480	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G011860	Cla97C02G050460	Watermelon (97103) v2	cmawmbB629
CmaCh02G011860	Bhi10G000375	Wax gourd	cmawgoB0757
CmaCh02G011860	CsGy4G011530	Cucumber (Gy14) v2	cgybcmaB527
CmaCh02G011860	Carg16979	Silver-seed gourd	carcmaB0653
CmaCh02G011860	Carg02772	Silver-seed gourd	carcmaB1268

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G011860	Cucumber (Chinese Long) v2	cmacuB605
CmaCh02G011860	Melon (DHL92) v3.5.1	cmameB572
CmaCh02G011860	Watermelon (Charleston Gray)	cmawcgB541
CmaCh02G011860	Watermelon (97103) v1	cmawmB592
CmaCh02G011860	Cucurbita pepo (Zucchini)	cmacpeB627
CmaCh02G011860	Cucurbita pepo (Zucchini)	cmacpeB632
CmaCh02G011860	Bottle gourd (USVL1VR-Ls)	cmalsiB540
CmaCh02G011860	Cucumber (Gy14) v2	cgybcmaB525
CmaCh02G011860	Melon (DHL92) v3.6.1	cmamedB654
CmaCh02G011860	Silver-seed gourd	carcmaB0733
CmaCh02G011860	Cucumber (Chinese Long) v3	cmacucB0726
CmaCh02G011860	Cucumber (Chinese Long) v3	cmacucB0728
CmaCh02G011860	Cucurbita maxima (Rimu)	cmacmaB112
CmaCh02G011860	Cucurbita maxima (Rimu)	cmacmaB470
CmaCh02G011860	Cucumber (Gy14) v1	cgycmaB0424
CmaCh02G011860	Cucurbita moschata (Rifu)	cmacmoB607
CmaCh02G011860	Wild cucumber (PI 183967)	cmacpiB612