CmaCh20G000170 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G000170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein
Location	Cma_Chr20 : 42016 .. 42810 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCACTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATCTCGATTTTAGTTCTCCTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGACCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCACTTTCACCCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTGCTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGATAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTCAGACTATAA

mRNA sequence

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCACTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATCTCGATTTTAGTTCTCCTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGACCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCACTTTCACCCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTGCTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGATAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTCAGACTATAA

Coding sequence (CDS)

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCACTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATCTCGATTTTAGTTCTCCTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGACCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCACTTTCACCCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTGCTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGATAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTCAGACTATAA

Protein sequence

MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL

Homology

[Close]

BLAST of CmaCh20G000170 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.6e-13
Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1


Query: 74  CCRCLCWTI--SILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDAT 133
           CC C   ++  +IL+ + VL+GI   I++L+FRP   ++ +   ++T+FTL   + L   
Sbjct: 39  CCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYN 98

Query: 134 FTLTLTTTNPNKKIGIYYEGGSHISAWYMETKL-CEGALPKFYQGHRNRTVLNVPLVGVT 193
             L  T  NPN++IG+YY+    +  +Y + +      + KFYQGH+N TV+   LVG  
Sbjct: 99  LDLNFTIRNPNRRIGVYYD-EIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVG-- 158

Query: 194 ENATALFTTLQQ---EQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVS- 253
           +    L    ++   E   +    ++  +R  +R K G +K  + K    C L V   S 
Sbjct: 159 QQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSN 218

Query: 254 ANNDIVIKNSSC 259
           + +  V + + C
Sbjct: 219 STSGFVFQPTKC 227

[Close]

BLAST of CmaCh20G000170 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.8e-13
Identity = 56/183 (30.60%), Postives = 88/183 (48.09%), Query Frame = 1


Query: 71  RSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDR-LD 130
           R C C  L   + +++ L+V++G+   I +L+ RP+  ++ +    +T+F     D  L 
Sbjct: 31  RGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILR 90

Query: 131 ATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVG- 190
               LT+   NPNK+IG+YY+      A+Y   +     L  FYQGH+N TVL     G 
Sbjct: 91  YNLALTVPVRNPNKRIGLYYD-RIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQ 150

Query: 191 --VTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVS 250
             V  NA    T     ++ +G   + +  R  VR KLG LK  ++K    C  L   +S
Sbjct: 151 NLVIFNAGQSRTL--NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPLS 210

[Close]

BLAST of CmaCh20G000170 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.3e-08
Identity = 39/180 (21.67%), Postives = 84/180 (46.67%), Query Frame = 1


Query: 84  ILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDATFTLTLTTTNPNK 143
           +++  ++++ I + +++++ +P  P + +    V  F L   + L + F +T+ + N N 
Sbjct: 24  VIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNS 83

Query: 144 KIGIYYEGGSHISAWYMETKL-CEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQ 203
           +IGIYY+   H+ A Y   ++    A+P  YQGH+   V +  + G +            
Sbjct: 84  RIGIYYD-RLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALG 143

Query: 204 EQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKL 263
           ++Q  G + L +     VR K+G+L   K      C+  ++       + +  ++ K+ L
Sbjct: 144 DEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYML 202

[Close]

BLAST of CmaCh20G000170 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-07
Identity = 55/228 (24.12%), Postives = 100/228 (43.86%), Query Frame = 1


Query: 42  PPRTAEATVLYPPFRRTIPVMH------SKPPKKRRSCCCRCLCWTISILVLLLVLIGIV 101
           PP  A     + P RRT P +       ++P   RR     C+   I  LVLL +L+G+ 
Sbjct: 3   PPNPA-----HQPARRTQPQLQPQSQPRAQPLPGRRMNPVLCI---IVALVLLGLLVGLA 62

Query: 102 VGILYLVFRPKLPEYSIDKLQVTQFTLGGN-DRLDATFTLTLTTTNPNKKIGIYYEGGSH 161
           + I YL  RPK   Y+++   V +F +G N D ++A F+  + + NP K + + Y     
Sbjct: 63  ILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYH-SMR 122

Query: 162 ISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNL 221
           IS  +    +    +  F Q  +N T +   LV      +       + ++  G+I + +
Sbjct: 123 ISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEV 182

Query: 222 NVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKL 263
            +   V  K    +  +    A C  ++ +V++++    +   CK +L
Sbjct: 183 YITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of CmaCh20G000170 vs. TrEMBL
Match: A0A0A0KZ15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269210 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.4e-122
Identity = 227/264 (85.98%), Postives = 239/264 (90.53%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MAEHQKI+PLHDV   +  +P   APTDPLVP GT+KSDA    T    V YPPF+RTIP
Sbjct: 1   MAEHQKIHPLHDV---EAPSPTPAAPTDPLVPRGTQKSDAAD--TTATPVQYPPFQRTIP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           VMHSKPPKKRRSCCCRC CWTISILVLLLVLIGIV+GILYLVFRPKLPEYSID+LQV+QF
Sbjct: 61  VMHSKPPKKRRSCCCRCRCWTISILVLLLVLIGIVIGILYLVFRPKLPEYSIDRLQVSQF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
           TL GNDRLDA F LTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALPKFYQGHRNRT
Sbjct: 121 TLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYTETKLCEGALPKFYQGHRNRT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPLVGVTENATALFTTLQQ+ QQTG+IPLNLNVRQPVRIKLGSLKLMKVKFSATCRL
Sbjct: 181 VLNVPLVGVTENATALFTTLQQQHQQTGNIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
           LVDSVSAN+DIVIKNS+CKFKLRL
Sbjct: 241 LVDSVSANSDIVIKNSNCKFKLRL 259

[Close]

BLAST of CmaCh20G000170 vs. TrEMBL
Match: B9SX36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0303920 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.1e-90
Identity = 169/264 (64.02%), Postives = 205/264 (77.65%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MA+ Q+I+P+     HDVEAP    PT PL+P  + KSD G P   +    YPPF+RT P
Sbjct: 1   MADQQRIHPV----THDVEAPQ--TPTVPLMPRNSSKSDQGDPAAQQ----YPPFQRTFP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           V HSKPPKK RSCCC+CLCWT+S+L++L+V+IGI++GILYLVFRPKLP++SID+LQ+TQF
Sbjct: 61  VKHSKPPKK-RSCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
            L  +  L A F +T+T TNPN+KIGIYYEGGSHI  WY  TKLCEG+LPKFYQGH N T
Sbjct: 121 NLSSDSSLSAAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPL G T++A  L T+LQQ+QQ TG IPLNL V+QPVRIKLG LKL ++KF   C+L
Sbjct: 181 VLNVPLTGHTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
            VDS+S NNDI I+NSSCKF L L
Sbjct: 241 DVDSLSTNNDISIRNSSCKFSLNL 253

[Close]

BLAST of CmaCh20G000170 vs. TrEMBL
Match: B9I456_POPTR (NDR1/HIN1-LIKE 25 family protein OS=Populus trichocarpa GN=POPTR_0012s12790g PE=4 SV=2)

HSP 1 Score: 337.8 bits (865), Expect = 1.2e-89
Identity = 172/269 (63.94%), Postives = 203/269 (75.46%), Query Frame = 1


Query: 1   MAEHQKIYPL-----HDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPF 60
           MA+HQK+YPL     HD    DVEAP    P  PLVP G+ KSD G P        YPPF
Sbjct: 1   MADHQKVYPLNTSSTHDDQPLDVEAP--QTPRVPLVPRGSSKSDQGDPAAHIHGHHYPPF 60

Query: 61  RRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKL 120
           +RTIPV H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++SID L
Sbjct: 61  QRTIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKFSIDTL 120

Query: 121 QVTQFTLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQG 180
           Q+T+F L  N  L ATF +T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LPKFYQG
Sbjct: 121 QITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPKFYQG 180

Query: 181 HRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFS 240
           HRN TVLNV L G T++   L T+LQQ+Q Q G IPLNL V QPVRIKLG LKLMKVKF 
Sbjct: 181 HRNTTVLNVLLSGQTDDGNTLLTSLQQQQLQAGIIPLNLRVDQPVRIKLGKLKLMKVKFR 240

Query: 241 ATCRLLVDSVSANNDIVIKNSSCKFKLRL 265
             CRL +DS++ANN I I+NSSCKF+ RL
Sbjct: 241 VRCRLDIDSLAANNAINIRNSSCKFRFRL 267

[Close]

BLAST of CmaCh20G000170 vs. TrEMBL
Match: A0A061FK27_THECC (NDR1/HIN1-like 25, putative OS=Theobroma cacao GN=TCM_036392 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.2e-89
Identity = 175/265 (66.04%), Postives = 210/265 (79.25%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MA+ QKI+P   VP  DVEAPP  +PT PLVP GT KSD G P        YPPF+RT+P
Sbjct: 1   MADQQKIHP---VP--DVEAPPQTSPTAPLVPEGTLKSDKGKP-----VEEYPPFKRTLP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
            MHSKPPKK RSC C+CLCWT+S+L+LL+V++GI+VGI++LVF+PKLP+YSID LQ+TQF
Sbjct: 61  SMHSKPPKK-RSCFCKCLCWTLSLLLLLIVILGIIVGIIFLVFQPKLPKYSIDTLQITQF 120

Query: 121 TLGGND-RLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNR 180
            L   D  L ATF +T+T  NPNK+IGIYYEGGS IS WY ETKLCEG++PKFYQGHRN 
Sbjct: 121 DLSSVDSSLSATFDVTITARNPNKRIGIYYEGGSRISVWYTETKLCEGSMPKFYQGHRNT 180

Query: 181 TVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCR 240
           TVL +PL G  +N T L TTLQ++QQQTG+IPL L V QPVR+KLG LKLMKVKFS  C 
Sbjct: 181 TVLLLPLSGQIQNGTGLLTTLQEQQQQTGNIPLRLRVNQPVRVKLGKLKLMKVKFSVRCG 240

Query: 241 LLVDSVSANNDIVIKNSSCKFKLRL 265
           L+VD++SANN I I++SSCKF+LRL
Sbjct: 241 LVVDALSANNAIRIQSSSCKFRLRL 254

[Close]

BLAST of CmaCh20G000170 vs. TrEMBL
Match: A0A067LEP7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 5.9e-89
Identity = 169/264 (64.02%), Postives = 205/264 (77.65%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MA+ Q+I+P+      DVEAP    PT PL+P    KSD G P   E    YPPF+RT+P
Sbjct: 1   MADQQRIHPV----TQDVEAPQ--PPTAPLMPRNASKSDKGDPAVEENR--YPPFQRTLP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           V+HSKPPKKRRSC CRCLCWT+S+++L++V++GI+ GILYLVFRPKLP+YSID LQ+T+F
Sbjct: 61  VIHSKPPKKRRSCFCRCLCWTLSLILLIIVIVGIIAGILYLVFRPKLPKYSIDGLQITEF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
            L  +  L A F + +T  NPNKKIGIYYEGGSHI   Y+ TKLCEG+LPKFYQGHRN T
Sbjct: 121 NLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGSLPKFYQGHRNIT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPL G T++A  LFT+LQQ+QQ+ G IPLNL V+QPVR+KLG LKLMKVKF   C+L
Sbjct: 181 VLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRVKQPVRVKLGKLKLMKVKFLVKCKL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
            VDS+S  NDI I+NSSCKF+LRL
Sbjct: 241 DVDSLSTANDIRIRNSSCKFRLRL 256

[Close]

BLAST of CmaCh20G000170 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-72
Identity = 138/264 (52.27%), Postives = 183/264 (69.32%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           M++HQKIYP+ D             PT PLVP G+ +S+ G P       L    +R +P
Sbjct: 1   MSQHQKIYPVQDPEAATAR------PTAPLVPRGSSRSEHGDPSKVP---LNQRPQRFVP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           +    PPKKRRSCCCRC C+T   L+LL+V +G  +GILYLVF+PKLP+YSID+LQ+T+F
Sbjct: 61  LA---PPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
            L  +  L   F +T+T  NPN+KIGIYYE GS I+ WYME +L  G+LPKFYQGH N T
Sbjct: 121 ALNQDSSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           V+ V + G T+NA+ L TTL+++QQ+TG+IPL + V QPVR+K G LKL +V+F   C +
Sbjct: 181 VIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGV 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
            VDS++ NN I I++SSCKF+LRL
Sbjct: 241 FVDSLATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of CmaCh20G000170 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 265.0 bits (676), Expect = 4.9e-71
Identity = 138/265 (52.08%), Postives = 189/265 (71.32%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPP-RTAEATVLYPPFRRTI 60
           M++HQKI+P+ D      EAPP P  T PLVP G+ +S+ G P +T +A  L PP     
Sbjct: 1   MSDHQKIHPVSDP-----EAPPHP--TAPLVPRGSSRSEHGDPTKTQQAAPLDPP----- 60

Query: 61  PVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQ 120
                +  K  RSC CRC+C+T+ +L LL+V++G +VGILYLVFRPK P+Y+ID+LQ+T+
Sbjct: 61  -----REKKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTR 120

Query: 121 FTLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNR 180
           F L  +  L   F +T+T  NPN+KIGIYYE GS IS  YM+T++  G+LPKFYQGH N 
Sbjct: 121 FQLNQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENT 180

Query: 181 TVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCR 240
           T++ V + G T+NAT+L TTLQ++Q+ TGSIPL + V QPVRIKLG LKLMKV+F   C 
Sbjct: 181 TIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCG 240

Query: 241 LLVDSVSANNDIVIKNSSCKFKLRL 265
           + VDS++AN+ I +++S+CK++ RL
Sbjct: 241 VSVDSLAANSVIRVRSSNCKYRFRL 248

[Close]

BLAST of CmaCh20G000170 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 211.1 bits (536), Expect = 8.5e-55
Identity = 106/216 (49.07%), Postives = 141/216 (65.28%), Query Frame = 1


Query: 49  TVLYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLP 108
           TVL P  R   P+     P K R+ CC+  CW +S+LV+ L+ + I V ++Y VF PKLP
Sbjct: 28  TVLLPVQR---PIPPPVIPSKNRNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLP 87

Query: 109 EYSIDKLQVTQFTLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGA 168
            Y ++ L+VT   +  +  L A F + +T  NPN+KIGIYYE G HI  WY +TKLCEG 
Sbjct: 88  SYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGP 147

Query: 169 LPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLK 228
           +P+FYQGHRN T LNV L G  +    +   LQQ QQQTG +PL+L V  PV IKLG+LK
Sbjct: 148 IPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ-QQQTGRVPLDLKVNAPVAIKLGNLK 207

Query: 229 LMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 265
           + K++   +C+L+VDS+S NN+I IK S C FK +L
Sbjct: 208 MKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAKL 239

[Close]

BLAST of CmaCh20G000170 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 61/190 (32.11%), Postives = 103/190 (54.21%), Query Frame = 1


Query: 68  KKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDR 127
           K  RS C  C C  ++ + +L+VL GI   +LYL++RP+ P+YSI+   V+   L     
Sbjct: 65  KTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP 124

Query: 128 LDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLV 187
           +  +F +T+ + N N KIG+YYE  S +  +Y +  +  G +P FYQ  +N TV+ + L 
Sbjct: 125 ISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLS 184

Query: 188 GVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSA 247
           G     T+      + +    ++P  L ++ PV+IK GS+K   +  +  C + VD ++A
Sbjct: 185 GSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTA 244

Query: 248 NNDIVIKNSS 258
            + IV +  S
Sbjct: 245 PSRIVSRKCS 254

[Close]

BLAST of CmaCh20G000170 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23
Identity = 67/237 (28.27%), Postives = 112/237 (47.26%), Query Frame = 1


Query: 35  TEKSDAGPPRTAEATVL-------YPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVL 94
           ++KS  GPP       L        PP        +    K  +SCC RCLC+++S L++
Sbjct: 46  SQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRKTNKSCCRRCLCYSLSALLI 105

Query: 95  LLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDATFTLTLTTTNPNKKIGI 154
           ++VL  I  G  YLV++P  P++S+  + VT   L  +        + L + N   K+G+
Sbjct: 106 IIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGL 165

Query: 155 YYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQT 214
            YE G+    ++  TKL  G    F Q   N TV+   L G +    +       E Q+ 
Sbjct: 166 IYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKK 225

Query: 215 GSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 265
           G +P  L ++ PV+ K+GS+    +  +  C++ VD ++A+    +K  +C+  L L
Sbjct: 226 GKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTAS--ATVKTENCETGLSL 280

[Close]

BLAST of CmaCh20G000170 vs. NCBI nr
Match: gi|449463889|ref|XP_004149663.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 3.4e-122
Identity = 227/264 (85.98%), Postives = 239/264 (90.53%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MAEHQKI+PLHDV   +  +P   APTDPLVP GT+KSDA    T    V YPPF+RTIP
Sbjct: 1   MAEHQKIHPLHDV---EAPSPTPAAPTDPLVPRGTQKSDAAD--TTATPVQYPPFQRTIP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           VMHSKPPKKRRSCCCRC CWTISILVLLLVLIGIV+GILYLVFRPKLPEYSID+LQV+QF
Sbjct: 61  VMHSKPPKKRRSCCCRCRCWTISILVLLLVLIGIVIGILYLVFRPKLPEYSIDRLQVSQF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
           TL GNDRLDA F LTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALPKFYQGHRNRT
Sbjct: 121 TLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYTETKLCEGALPKFYQGHRNRT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPLVGVTENATALFTTLQQ+ QQTG+IPLNLNVRQPVRIKLGSLKLMKVKFSATCRL
Sbjct: 181 VLNVPLVGVTENATALFTTLQQQHQQTGNIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
           LVDSVSAN+DIVIKNS+CKFKLRL
Sbjct: 241 LVDSVSANSDIVIKNSNCKFKLRL 259

[Close]

BLAST of CmaCh20G000170 vs. NCBI nr
Match: gi|659097887|ref|XP_008449868.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.4e-122
Identity = 227/264 (85.98%), Postives = 241/264 (91.29%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MAEHQKI+P+HDV   +  +P   APTDPLVP GT+KSDA    TA   V YPPF+RTIP
Sbjct: 1   MAEHQKIHPVHDV---EAPSPTPAAPTDPLVPRGTQKSDAADTTTA---VQYPPFQRTIP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIV+GILYLVFRPKLPEYSID+L+V+QF
Sbjct: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVIGILYLVFRPKLPEYSIDRLKVSQF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
           TL GNDRLDA F LTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALPKFYQGHRNRT
Sbjct: 121 TLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYAETKLCEGALPKFYQGHRNRT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPLVGVTENATALFTTLQQ+ Q+TG+IPLNLNVRQPVRIKLGSLKLMKVKFSATCRL
Sbjct: 181 VLNVPLVGVTENATALFTTLQQQHQETGNIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
           LVDSVSAN+DIVIKNSSCKFKLRL
Sbjct: 241 LVDSVSANSDIVIKNSSCKFKLRL 258

[Close]

BLAST of CmaCh20G000170 vs. NCBI nr
Match: gi|255579423|ref|XP_002530555.1| (PREDICTED: protein YLS9 [Ricinus communis])

HSP 1 Score: 339.7 bits (870), Expect = 4.5e-90
Identity = 169/264 (64.02%), Postives = 205/264 (77.65%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MA+ Q+I+P+     HDVEAP    PT PL+P  + KSD G P   +    YPPF+RT P
Sbjct: 1   MADQQRIHPV----THDVEAPQ--TPTVPLMPRNSSKSDQGDPAAQQ----YPPFQRTFP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           V HSKPPKK RSCCC+CLCWT+S+L++L+V+IGI++GILYLVFRPKLP++SID+LQ+TQF
Sbjct: 61  VKHSKPPKK-RSCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDFSIDRLQITQF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
            L  +  L A F +T+T TNPN+KIGIYYEGGSHI  WY  TKLCEG+LPKFYQGH N T
Sbjct: 121 NLSSDSSLSAAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLPKFYQGHENTT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VLNVPL G T++A  L T+LQQ+QQ TG IPLNL V+QPVRIKLG LKL ++KF   C+L
Sbjct: 181 VLNVPLTGHTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLFEIKFLVKCKL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
            VDS+S NNDI I+NSSCKF L L
Sbjct: 241 DVDSLSTNNDISIRNSSCKFSLNL 253

[Close]

BLAST of CmaCh20G000170 vs. NCBI nr
Match: gi|743857416|ref|XP_011030182.1| (PREDICTED: protein YLS9-like [Populus euphratica])

HSP 1 Score: 339.3 bits (869), Expect = 5.8e-90
Identity = 166/264 (62.88%), Postives = 203/264 (76.89%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIP 60
           MA+HQK++PL+    HD +   + AP  PLVP G+ KSD G P        YPPF+RTIP
Sbjct: 1   MADHQKVHPLNTSSTHDDQPLDVEAPRVPLVPRGSSKSDKGDPAAHIHDHHYPPFQRTIP 60

Query: 61  VMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQF 120
           V H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++SID LQ+T+F
Sbjct: 61  VTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKFSIDALQITRF 120

Query: 121 TLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRT 180
            L  N  L ATF +T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LPKFYQGHRN T
Sbjct: 121 NLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPKFYQGHRNTT 180

Query: 181 VLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRL 240
           VL+V L G T++   L T+LQQ+QQQTG IPLNL V QPVR+KLG LKLMKVKF   CRL
Sbjct: 181 VLSVLLSGQTDDGNTLLTSLQQQQQQTGIIPLNLRVEQPVRVKLGKLKLMKVKFRVRCRL 240

Query: 241 LVDSVSANNDIVIKNSSCKFKLRL 265
            +DS++ N+ I I+NSSCKFK RL
Sbjct: 241 DIDSLAPNSAINIRNSSCKFKFRL 264

[Close]

BLAST of CmaCh20G000170 vs. NCBI nr
Match: gi|566198193|ref|XP_002318799.2| (NDR1/HIN1-LIKE 25 family protein [Populus trichocarpa])

HSP 1 Score: 337.8 bits (865), Expect = 1.7e-89
Identity = 172/269 (63.94%), Postives = 203/269 (75.46%), Query Frame = 1


Query: 1   MAEHQKIYPL-----HDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPF 60
           MA+HQK+YPL     HD    DVEAP    P  PLVP G+ KSD G P        YPPF
Sbjct: 1   MADHQKVYPLNTSSTHDDQPLDVEAP--QTPRVPLVPRGSSKSDQGDPAAHIHGHHYPPF 60

Query: 61  RRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKL 120
           +RTIPV H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++SID L
Sbjct: 61  QRTIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKFSIDTL 120

Query: 121 QVTQFTLGGNDRLDATFTLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQG 180
           Q+T+F L  N  L ATF +T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LPKFYQG
Sbjct: 121 QITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLPKFYQG 180

Query: 181 HRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFS 240
           HRN TVLNV L G T++   L T+LQQ+Q Q G IPLNL V QPVRIKLG LKLMKVKF 
Sbjct: 181 HRNTTVLNVLLSGQTDDGNTLLTSLQQQQLQAGIIPLNLRVDQPVRIKLGKLKLMKVKFR 240

Query: 241 ATCRLLVDSVSANNDIVIKNSSCKFKLRL 265
             CRL +DS++ANN I I+NSSCKF+ RL
Sbjct: 241 VRCRLDIDSLAANNAINIRNSSCKFRFRL 267

The following BLAST results are available for this feature:

BLAST of CmaCh20G000170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NHL3_ARATH	2.6e-13	28.65	NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1	[more]
YLS9_ARATH	9.8e-13	30.60	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
NHL12_ARATH	3.3e-08	21.67	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1	[more]
Y1816_ARATH	4.7e-07	24.12	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1	[more]

BLAST of CmaCh20G000170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ15_CUCSA	2.4e-122	85.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269210 PE=4 SV=1	[more]
B9SX36_RICCO	3.1e-90	64.02	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0303920 PE=4 SV=1	[more]
B9I456_POPTR	1.2e-89	63.94	NDR1/HIN1-LIKE 25 family protein OS=Populus trichocarpa GN=POPTR_0012s12790g PE=...	[more]
A0A061FK27_THECC	1.2e-89	66.04	NDR1/HIN1-like 25, putative OS=Theobroma cacao GN=TCM_036392 PE=4 SV=1	[more]
A0A067LEP7_JATCU	5.9e-89	64.02	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1	[more]

BLAST of CmaCh20G000170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65690.1	1.5e-72	52.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G36970.1	4.9e-71	52.08	NDR1/HIN1-like 25	[more]
AT1G54540.1	8.5e-55	49.07	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G27080.1	1.1e-25	32.11	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G21130.1	1.3e-23	28.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of CmaCh20G000170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463889\|ref\|XP_004149663.1\|	3.4e-122	85.98	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659097887\|ref\|XP_008449868.1\|	3.4e-122	85.98	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|255579423\|ref\|XP_002530555.1\|	4.5e-90	64.02	PREDICTED: protein YLS9 [Ricinus communis]	[more]
gi\|743857416\|ref\|XP_011030182.1\|	5.8e-90	62.88	PREDICTED: protein YLS9-like [Populus euphratica]	[more]
gi\|566198193\|ref\|XP_002318799.2\|	1.7e-89	63.94	NDR1/HIN1-LIKE 25 family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G000170.1	CmaCh20G000170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 135..238 score: 8.9
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 16..264 score: 1.0E
None	No IPR available	PANTHER	PTHR31852:SF1	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 16..264 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G000170	Cucsa.152900	Cucumber (Gy14) v1	cgycmaB0423
CmaCh20G000170	Cucsa.142720	Cucumber (Gy14) v1	cgycmaB0398
CmaCh20G000170	Cla003142	Watermelon (97103) v1	cmawmB531
CmaCh20G000170	Csa4G269210	Cucumber (Chinese Long) v2	cmacuB549
CmaCh20G000170	MELO3C014709	Melon (DHL92) v3.5.1	cmameB521
CmaCh20G000170	ClCG02G024240	Watermelon (Charleston Gray)	cmawcgB489
CmaCh20G000170	CSPI04G12710	Wild cucumber (PI 183967)	cmacpiB554
CmaCh20G000170	CSPI01G29680	Wild cucumber (PI 183967)	cmacpiB543
CmaCh20G000170	CmoCh20G000130	Cucurbita moschata (Rifu)	cmacmoB550
CmaCh20G000170	CmoCh10G010290	Cucurbita moschata (Rifu)	cmacmoB538
CmaCh20G000170	Lsi10G009350	Bottle gourd (USVL1VR-Ls)	cmalsiB500
CmaCh20G000170	Cp4.1LG16g09310	Cucurbita pepo (Zucchini)	cmacpeB564
CmaCh20G000170	MELO3C014709.2	Melon (DHL92) v3.6.1	cmamedB598
CmaCh20G000170	CsaV3_1G042120	Cucumber (Chinese Long) v3	cmacucB0647
CmaCh20G000170	CsaV3_4G017370	Cucumber (Chinese Long) v3	cmacucB0662
CmaCh20G000170	CsGy4G011580	Cucumber (Gy14) v2	cgybcmaB523
CmaCh20G000170	Carg06962	Silver-seed gourd	carcmaB0732

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G000170	Cucurbita moschata (Rifu)	cmacmoB555
CmaCh20G000170	Cucurbita pepo (Zucchini)	cmacpeB567
CmaCh20G000170	Cucurbita pepo (Zucchini)	cmacpeB586
CmaCh20G000170	Watermelon (97103) v2	cmawmbB577
CmaCh20G000170	Wax gourd	cmawgoB0693
CmaCh20G000170	Cucurbita maxima (Rimu)	cmacmaB111
CmaCh20G000170	Cucurbita maxima (Rimu)	cmacmaB470