Cp4.1LG16g09310 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG16g09310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	Cp4.1LG16 : 8653895 .. 8654719 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATTTCGATTTTAGTTCTACTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGGCCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCATTTTCAACCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTACTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGACAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTGAGACTATAA

mRNA sequence

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATTTCGATTTTAGTTCTACTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGGCCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCATTTTCAACCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTACTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGACAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTGAGACTATAA

Coding sequence (CDS)

ATGGCGGAGCACCAAAAGATATATCCACTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTTCCTCTCCACGACGTCGAGGCACCGCCCATGCCGGCTCCCACTGACCCCTTGGTGCCGCATGGAACAGAAAAATCCGACGCCGGACCGCCGCGTACTGCCGAGGCCACTGTTCTATATCCACCCTTTCGGCGGACGATCCCGGTGATGCACTCCAAGCCACCGAAGAAGAGACGAAGCTGTTGCTGCAGGTGCCTGTGTTGGACGATTTCGATTTTAGTTCTACTACTGGTTTTGATCGGAATCGTGGTCGGAATCCTGTACCTGGTGTTCCGGCCGAAGCTTCCGGAGTATTCGATCGATAAACTGCAAGTGACGCAGTTCACGCTGGGTGGAAACGACCGGTTGGACGCCATTTTCAACCTGACGCTGACCACTACGAACCCTAACAAGAAAATCGGAATCTATTACGAAGGAGGGAGCCACATAAGCGCGTGGTACATGGAAACGAAGCTGTGCGAAGGGGCTTTGCCGAAGTTTTACCAAGGCCATCGGAATAGGACGGTACTTAACGTACCGTTGGTGGGAGTGACGGAAAACGCCACCGCGCTTTTCACGACGCTGCAGCAGGAGCAGCAACAAACCGGCAGTATTCCGTTGAATCTGAATGTGAGACAGCCGGTCAGGATAAAGCTGGGTAGCTTGAAGCTGATGAAGGTGAAGTTCTCGGCAACCTGCAGACTGTTGGTTGACAGTGTTTCAGCCAATAACGACATCGTCATTAAAAACAGTAGCTGTAAGTTCAAGCTGAGACTATAA

Protein sequence

MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATVLYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL

Homology

[Close]

BLAST of Cp4.1LG16g09310 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-13
Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 1


Query: 84  CCRCLCWTI--SILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDAI 143
           CC C   ++  +IL+ + VL+GI   I++L+FRP   ++ +   ++T+FTL   + L   
Sbjct: 39  CCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYN 98

Query: 144 FNLTLTTTNPNKKIGIYYEGGSHISAWYMETKL-CEGALPKFYQGHRNRTVLNVPLVGVT 203
            +L  T  NPN++IG+YY+    +  +Y + +      + KFYQGH+N TV+   LVG  
Sbjct: 99  LDLNFTIRNPNRRIGVYYD-EIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVG-- 158

Query: 204 ENATALFTTLQQ---EQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVS- 263
           +    L    ++   E   +    ++  +R  +R K G +K  + K    C L V   S 
Sbjct: 159 QQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSN 218

Query: 264 ANNDIVIKNSSC 269
           + +  V + + C
Sbjct: 219 STSGFVFQPTKC 227

[Close]

BLAST of Cp4.1LG16g09310 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 57/184 (30.98%), Postives = 90/184 (48.91%), Query Frame = 1


Query: 81  RSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDA 140
           R C C  L   + +++ L+V++G+   I +L+ RP+  ++ +    +T+F     D +  
Sbjct: 31  RGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNI-L 90

Query: 141 IFNLTLTTT--NPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVG 200
            +NL LT    NPNK+IG+YY+      A+Y   +     L  FYQGH+N TVL     G
Sbjct: 91  RYNLALTVPVRNPNKRIGLYYD-RIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQG 150

Query: 201 ---VTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSV 260
              V  NA    T     ++ +G   + +  R  VR KLG LK  ++K    C  L   +
Sbjct: 151 QNLVIFNAGQSRTL--NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDCDDLRLPL 210

[Close]

BLAST of Cp4.1LG16g09310 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.4e-08
Identity = 39/180 (21.67%), Postives = 84/180 (46.67%), Query Frame = 1


Query: 94  ILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNK 153
           +++  ++++ I + +++++ +P  P + +    V  F L   + L + F +T+ + N N 
Sbjct: 24  VIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQITIASRNRNS 83

Query: 154 KIGIYYEGGSHISAWYMETKL-CEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQ 213
           +IGIYY+   H+ A Y   ++    A+P  YQGH+   V +  + G +            
Sbjct: 84  RIGIYYD-RLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNAVALG 143

Query: 214 EQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKL 273
           ++Q  G + L +     VR K+G+L   K      C+  ++       + +  ++ K+ L
Sbjct: 144 DEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGVHVGENAVKYML 202

[Close]

BLAST of Cp4.1LG16g09310 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.9e-07
Identity = 55/228 (24.12%), Postives = 100/228 (43.86%), Query Frame = 1


Query: 52  PPRTAEATVLYPPFRRTIPVMH------SKPPKKRRSCCCRCLCWTISILVLLLVLIGIV 111
           PP  A     + P RRT P +       ++P   RR     C+   I  LVLL +L+G+ 
Sbjct: 3   PPNPA-----HQPARRTQPQLQPQSQPRAQPLPGRRMNPVLCI---IVALVLLGLLVGLA 62

Query: 112 VGILYLVFRPKLPEYSIDKLQVTQFTLGGN-DRLDAIFNLTLTTTNPNKKIGIYYEGGSH 171
           + I YL  RPK   Y+++   V +F +G N D ++A F+  + + NP K + + Y     
Sbjct: 63  ILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYH-SMR 122

Query: 172 ISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNL 231
           IS  +    +    +  F Q  +N T +   LV      +       + ++  G+I + +
Sbjct: 123 ISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRAEKSKGTIEMEV 182

Query: 232 NVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKL 273
            +   V  K    +  +    A C  ++ +V++++    +   CK +L
Sbjct: 183 YITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

[Close]

BLAST of Cp4.1LG16g09310 vs. TrEMBL
Match: A0A0A0KZ15_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269210 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.5e-122
Identity = 228/274 (83.21%), Postives = 241/274 (87.96%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MAEHQKI+PLHDV             +  +P   APTDPLVP GT+KSDA    T    V
Sbjct: 1   MAEHQKIHPLHDV-------------EAPSPTPAAPTDPLVPRGTQKSDAAD--TTATPV 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPVMHSKPPKKRRSCCCRC CWTISILVLLLVLIGIV+GILYLVFRPKLPEY
Sbjct: 61  QYPPFQRTIPVMHSKPPKKRRSCCCRCRCWTISILVLLLVLIGIVIGILYLVFRPKLPEY 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+LQV+QFTL GNDRLDA+FNLTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALP
Sbjct: 121 SIDRLQVSQFTLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYTETKLCEGALP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRNRTVLNVPLVGVTENATALFTTLQQ+ QQTG+IPLNLNVRQPVRIKLGSLKLM
Sbjct: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQQHQQTGNIPLNLNVRQPVRIKLGSLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKFSATCRLLVDSVSAN+DIVIKNS+CKFKLRL
Sbjct: 241 KVKFSATCRLLVDSVSANSDIVIKNSNCKFKLRL 259

[Close]

BLAST of Cp4.1LG16g09310 vs. TrEMBL
Match: B9I456_POPTR (NDR1/HIN1-LIKE 25 family protein OS=Populus trichocarpa GN=POPTR_0012s12790g PE=4 SV=2)

HSP 1 Score: 341.7 bits (875), Expect = 8.5e-91
Identity = 175/274 (63.87%), Postives = 207/274 (75.55%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+HQK+YPL+    HD    D PL DVEAP    P  PLVP G+ KSD G P       
Sbjct: 1   MADHQKVYPLNTSSTHD----DQPL-DVEAP--QTPRVPLVPRGSSKSDQGDPAAHIHGH 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPV H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++
Sbjct: 61  HYPPFQRTIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKF 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID LQ+T+F L  N  L A FN+T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LP
Sbjct: 121 SIDTLQITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRN TVLNV L G T++   L T+LQQ+Q Q G IPLNL V QPVRIKLG LKLM
Sbjct: 181 KFYQGHRNTTVLNVLLSGQTDDGNTLLTSLQQQQLQAGIIPLNLRVDQPVRIKLGKLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKF   CRL +DS++ANN I I+NSSCKF+ RL
Sbjct: 241 KVKFRVRCRLDIDSLAANNAINIRNSSCKFRFRL 267

[Close]

BLAST of Cp4.1LG16g09310 vs. TrEMBL
Match: B9SX36_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0303920 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.6e-89
Identity = 169/274 (61.68%), Postives = 206/274 (75.18%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+ Q+I+P+               HDVEAP    PT PL+P  + KSD G P   +   
Sbjct: 1   MADQQRIHPV--------------THDVEAPQ--TPTVPLMPRNSSKSDQGDPAAQQ--- 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RT PV HSKPPKK RSCCC+CLCWT+S+L++L+V+IGI++GILYLVFRPKLP++
Sbjct: 61  -YPPFQRTFPVKHSKPPKK-RSCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDF 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+LQ+TQF L  +  L A F++T+T TNPN+KIGIYYEGGSHI  WY  TKLCEG+LP
Sbjct: 121 SIDRLQITQFNLSSDSSLSAAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGH N TVLNVPL G T++A  L T+LQQ+QQ TG IPLNL V+QPVRIKLG LKL 
Sbjct: 181 KFYQGHENTTVLNVPLTGHTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLF 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           ++KF   C+L VDS+S NNDI I+NSSCKF L L
Sbjct: 241 EIKFLVKCKLDVDSLSTNNDISIRNSSCKFSLNL 253

[Close]

BLAST of Cp4.1LG16g09310 vs. TrEMBL
Match: A0A061FK27_THECC (NDR1/HIN1-like 25, putative OS=Theobroma cacao GN=TCM_036392 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-88
Identity = 174/275 (63.27%), Postives = 210/275 (76.36%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+ QKI+P   VP            DVEAPP  +PT PLVP GT KSD G P       
Sbjct: 1   MADQQKIHP---VP------------DVEAPPQTSPTAPLVPEGTLKSDKGKP-----VE 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RT+P MHSKPPKK RSC C+CLCWT+S+L+LL+V++GI+VGI++LVF+PKLP+Y
Sbjct: 61  EYPPFKRTLPSMHSKPPKK-RSCFCKCLCWTLSLLLLLIVILGIIVGIIFLVFQPKLPKY 120

Query: 121 SIDKLQVTQFTLGGND-RLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGAL 180
           SID LQ+TQF L   D  L A F++T+T  NPNK+IGIYYEGGS IS WY ETKLCEG++
Sbjct: 121 SIDTLQITQFDLSSVDSSLSATFDVTITARNPNKRIGIYYEGGSRISVWYTETKLCEGSM 180

Query: 181 PKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKL 240
           PKFYQGHRN TVL +PL G  +N T L TTLQ++QQQTG+IPL L V QPVR+KLG LKL
Sbjct: 181 PKFYQGHRNTTVLLLPLSGQIQNGTGLLTTLQEQQQQTGNIPLRLRVNQPVRVKLGKLKL 240

Query: 241 MKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           MKVKFS  C L+VD++SANN I I++SSCKF+LRL
Sbjct: 241 MKVKFSVRCGLVVDALSANNAIRIQSSSCKFRLRL 254

[Close]

BLAST of Cp4.1LG16g09310 vs. TrEMBL
Match: A0A067LEP7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.0e-88
Identity = 169/274 (61.68%), Postives = 206/274 (75.18%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+ Q+I+P+                DVEAP    PT PL+P    KSD G P   E   
Sbjct: 1   MADQQRIHPV--------------TQDVEAPQ--PPTAPLMPRNASKSDKGDPAVEENR- 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RT+PV+HSKPPKKRRSC CRCLCWT+S+++L++V++GI+ GILYLVFRPKLP+Y
Sbjct: 61  -YPPFQRTLPVIHSKPPKKRRSCFCRCLCWTLSLILLIIVIVGIIAGILYLVFRPKLPKY 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID LQ+T+F L  +  L A F++ +T  NPNKKIGIYYEGGSHI   Y+ TKLCEG+LP
Sbjct: 121 SIDGLQITEFNLSTDSSLSAAFDVRITAENPNKKIGIYYEGGSHIGVLYLGTKLCEGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRN TVLNVPL G T++A  LFT+LQQ+QQ+ G IPLNL V+QPVR+KLG LKLM
Sbjct: 181 KFYQGHRNITVLNVPLQGQTQDAYGLFTSLQQQQQENGVIPLNLRVKQPVRVKLGKLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKF   C+L VDS+S  NDI I+NSSCKF+LRL
Sbjct: 241 KVKFLVKCKLDVDSLSTANDIRIRNSSCKFRLRL 256

[Close]

BLAST of Cp4.1LG16g09310 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 267.7 bits (683), Expect = 7.9e-72
Identity = 139/274 (50.73%), Postives = 184/274 (67.15%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           M++HQKIYP+ D                       PT PLVP G+ +S+ G P       
Sbjct: 1   MSQHQKIYPVQD----------------PEAATARPTAPLVPRGSSRSEHGDPSKVP--- 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
           L    +R +P+    PPKKRRSCCCRC C+T   L+LL+V +G  +GILYLVF+PKLP+Y
Sbjct: 61  LNQRPQRFVPLA---PPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDY 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+LQ+T+F L  +  L   FN+T+T  NPN+KIGIYYE GS I+ WYME +L  G+LP
Sbjct: 121 SIDRLQLTRFALNQDSSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGH N TV+ V + G T+NA+ L TTL+++QQ+TG+IPL + V QPVR+K G LKL 
Sbjct: 181 KFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLF 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           +V+F   C + VDS++ NN I I++SSCKF+LRL
Sbjct: 241 EVRFLVRCGVFVDSLATNNVIKIQSSSCKFRLRL 252

[Close]

BLAST of Cp4.1LG16g09310 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-70
Identity = 139/275 (50.55%), Postives = 190/275 (69.09%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPP-RTAEAT 60
           M++HQKI+P+ D                EAPP P  T PLVP G+ +S+ G P +T +A 
Sbjct: 1   MSDHQKIHPVSDP---------------EAPPHP--TAPLVPRGSSRSEHGDPTKTQQAA 60

Query: 61  VLYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPE 120
            L PP          +  K  RSC CRC+C+T+ +L LL+V++G +VGILYLVFRPK P+
Sbjct: 61  PLDPP----------REKKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPD 120

Query: 121 YSIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGAL 180
           Y+ID+LQ+T+F L  +  L   FN+T+T  NPN+KIGIYYE GS IS  YM+T++  G+L
Sbjct: 121 YNIDRLQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSL 180

Query: 181 PKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKL 240
           PKFYQGH N T++ V + G T+NAT+L TTLQ++Q+ TGSIPL + V QPVRIKLG LKL
Sbjct: 181 PKFYQGHENTTIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKL 240

Query: 241 MKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           MKV+F   C + VDS++AN+ I +++S+CK++ RL
Sbjct: 241 MKVRFLVRCGVSVDSLAANSVIRVRSSNCKYRFRL 248

[Close]

BLAST of Cp4.1LG16g09310 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 211.5 bits (537), Expect = 6.7e-55
Identity = 106/216 (49.07%), Postives = 141/216 (65.28%), Query Frame = 1


Query: 59  TVLYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLP 118
           TVL P  R   P+     P K R+ CC+  CW +S+LV+ L+ + I V ++Y VF PKLP
Sbjct: 28  TVLLPVQR---PIPPPVIPSKNRNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLP 87

Query: 119 EYSIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGA 178
            Y ++ L+VT   +  +  L A F + +T  NPN+KIGIYYE G HI  WY +TKLCEG 
Sbjct: 88  SYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGP 147

Query: 179 LPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLK 238
           +P+FYQGHRN T LNV L G  +    +   LQQ QQQTG +PL+L V  PV IKLG+LK
Sbjct: 148 IPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQ-QQQTGRVPLDLKVNAPVAIKLGNLK 207

Query: 239 LMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           + K++   +C+L+VDS+S NN+I IK S C FK +L
Sbjct: 208 MKKIRILGSCKLVVDSLSTNNNINIKASDCSFKAKL 239

[Close]

BLAST of Cp4.1LG16g09310 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 1


Query: 78  KKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDR 137
           K  RS C  C C  ++ + +L+VL GI   +LYL++RP+ P+YSI+   V+   L     
Sbjct: 65  KTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSP 124

Query: 138 LDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLV 197
           +   FN+T+ + N N KIG+YYE  S +  +Y +  +  G +P FYQ  +N TV+ + L 
Sbjct: 125 ISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLS 184

Query: 198 GVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSA 257
           G     T+      + +    ++P  L ++ PV+IK GS+K   +  +  C + VD ++A
Sbjct: 185 GSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTA 244

Query: 258 NNDIVIKNSS 268
            + IV +  S
Sbjct: 245 PSRIVSRKCS 254

[Close]

BLAST of Cp4.1LG16g09310 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 67/237 (28.27%), Postives = 113/237 (47.68%), Query Frame = 1


Query: 45  TEKSDAGPPRTAEATVL-------YPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVL 104
           ++KS  GPP       L        PP        +    K  +SCC RCLC+++S L++
Sbjct: 46  SQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRKTNKSCCRRCLCYSLSALLI 105

Query: 105 LLVLIGIVVGILYLVFRPKLPEYSIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGI 164
           ++VL  I  G  YLV++P  P++S+  + VT   L  +     +  + L + N   K+G+
Sbjct: 106 IIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGL 165

Query: 165 YYEGGSHISAWYMETKLCEGALPKFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQT 224
            YE G+    ++  TKL  G    F Q   N TV+   L G +    +       E Q+ 
Sbjct: 166 IYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKK 225

Query: 225 GSIPLNLNVRQPVRIKLGSLKLMKVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           G +P  L ++ PV+ K+GS+    +  +  C++ VD ++A+    +K  +C+  L L
Sbjct: 226 GKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTAS--ATVKTENCETGLSL 280

[Close]

BLAST of Cp4.1LG16g09310 vs. NCBI nr
Match: gi|449463889|ref|XP_004149663.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 446.4 bits (1147), Expect = 3.5e-122
Identity = 228/274 (83.21%), Postives = 241/274 (87.96%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MAEHQKI+PLHDV             +  +P   APTDPLVP GT+KSDA    T    V
Sbjct: 1   MAEHQKIHPLHDV-------------EAPSPTPAAPTDPLVPRGTQKSDAAD--TTATPV 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPVMHSKPPKKRRSCCCRC CWTISILVLLLVLIGIV+GILYLVFRPKLPEY
Sbjct: 61  QYPPFQRTIPVMHSKPPKKRRSCCCRCRCWTISILVLLLVLIGIVIGILYLVFRPKLPEY 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+LQV+QFTL GNDRLDA+FNLTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALP
Sbjct: 121 SIDRLQVSQFTLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYTETKLCEGALP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRNRTVLNVPLVGVTENATALFTTLQQ+ QQTG+IPLNLNVRQPVRIKLGSLKLM
Sbjct: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQQHQQTGNIPLNLNVRQPVRIKLGSLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKFSATCRLLVDSVSAN+DIVIKNS+CKFKLRL
Sbjct: 241 KVKFSATCRLLVDSVSANSDIVIKNSNCKFKLRL 259

[Close]

BLAST of Cp4.1LG16g09310 vs. NCBI nr
Match: gi|659097887|ref|XP_008449868.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.5e-122
Identity = 228/274 (83.21%), Postives = 243/274 (88.69%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MAEHQKI+P+HDV             +  +P   APTDPLVP GT+KSDA    TA   V
Sbjct: 1   MAEHQKIHPVHDV-------------EAPSPTPAAPTDPLVPRGTQKSDAADTTTA---V 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIV+GILYLVFRPKLPEY
Sbjct: 61  QYPPFQRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVIGILYLVFRPKLPEY 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+L+V+QFTL GNDRLDA+FNLTLTT NPNKKIGIYYEGGSHISAWY ETKLCEGALP
Sbjct: 121 SIDRLKVSQFTLSGNDRLDAVFNLTLTTVNPNKKIGIYYEGGSHISAWYAETKLCEGALP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRNRTVLNVPLVGVTENATALFTTLQQ+ Q+TG+IPLNLNVRQPVRIKLGSLKLM
Sbjct: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQQHQETGNIPLNLNVRQPVRIKLGSLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKFSATCRLLVDSVSAN+DIVIKNSSCKFKLRL
Sbjct: 241 KVKFSATCRLLVDSVSANSDIVIKNSSCKFKLRL 258

[Close]

BLAST of Cp4.1LG16g09310 vs. NCBI nr
Match: gi|566198193|ref|XP_002318799.2| (NDR1/HIN1-LIKE 25 family protein [Populus trichocarpa])

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 175/274 (63.87%), Postives = 207/274 (75.55%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+HQK+YPL+    HD    D PL DVEAP    P  PLVP G+ KSD G P       
Sbjct: 1   MADHQKVYPLNTSSTHD----DQPL-DVEAP--QTPRVPLVPRGSSKSDQGDPAAHIHGH 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPV H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++
Sbjct: 61  HYPPFQRTIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKF 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID LQ+T+F L  N  L A FN+T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LP
Sbjct: 121 SIDTLQITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRN TVLNV L G T++   L T+LQQ+Q Q G IPLNL V QPVRIKLG LKLM
Sbjct: 181 KFYQGHRNTTVLNVLLSGQTDDGNTLLTSLQQQQLQAGIIPLNLRVDQPVRIKLGKLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKF   CRL +DS++ANN I I+NSSCKF+ RL
Sbjct: 241 KVKFRVRCRLDIDSLAANNAINIRNSSCKFRFRL 267

[Close]

BLAST of Cp4.1LG16g09310 vs. NCBI nr
Match: gi|743857416|ref|XP_011030182.1| (PREDICTED: protein YLS9-like [Populus euphratica])

HSP 1 Score: 339.0 bits (868), Expect = 7.9e-90
Identity = 172/274 (62.77%), Postives = 208/274 (75.91%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+HQK++PL+    HD    D PL DVEAP +P     LVP G+ KSD G P       
Sbjct: 1   MADHQKVHPLNTSSTHD----DQPL-DVEAPRVP-----LVPRGSSKSDKGDPAAHIHDH 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RTIPV H+KPPKKRRSCCCR LCWT+S+L+LL+++IG V GILYLVF+PKLP++
Sbjct: 61  HYPPFQRTIPVTHTKPPKKRRSCCCRFLCWTLSLLLLLILVIGAVAGILYLVFQPKLPKF 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID LQ+T+F L  N  L A FN+T+T  NPNKK+G+YYEGGSHIS WY  T LC+G+LP
Sbjct: 121 SIDALQITRFNLTNNSSLSATFNVTITARNPNKKVGVYYEGGSHISVWYTGTNLCQGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGHRN TVL+V L G T++   L T+LQQ+QQQTG IPLNL V QPVR+KLG LKLM
Sbjct: 181 KFYQGHRNTTVLSVLLSGQTDDGNTLLTSLQQQQQQTGIIPLNLRVEQPVRVKLGKLKLM 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           KVKF   CRL +DS++ N+ I I+NSSCKFK RL
Sbjct: 241 KVKFRVRCRLDIDSLAPNSAINIRNSSCKFKFRL 264

[Close]

BLAST of Cp4.1LG16g09310 vs. NCBI nr
Match: gi|255579423|ref|XP_002530555.1| (PREDICTED: protein YLS9 [Ricinus communis])

HSP 1 Score: 337.4 bits (864), Expect = 2.3e-89
Identity = 169/274 (61.68%), Postives = 206/274 (75.18%), Query Frame = 1


Query: 1   MAEHQKIYPLHDVPLHDVPLHDVPLHDVEAPPMPAPTDPLVPHGTEKSDAGPPRTAEATV 60
           MA+ Q+I+P+               HDVEAP    PT PL+P  + KSD G P   +   
Sbjct: 1   MADQQRIHPV--------------THDVEAPQ--TPTVPLMPRNSSKSDQGDPAAQQ--- 60

Query: 61  LYPPFRRTIPVMHSKPPKKRRSCCCRCLCWTISILVLLLVLIGIVVGILYLVFRPKLPEY 120
            YPPF+RT PV HSKPPKK RSCCC+CLCWT+S+L++L+V+IGI++GILYLVFRPKLP++
Sbjct: 61  -YPPFQRTFPVKHSKPPKK-RSCCCKCLCWTLSLLLILIVVIGIIIGILYLVFRPKLPDF 120

Query: 121 SIDKLQVTQFTLGGNDRLDAIFNLTLTTTNPNKKIGIYYEGGSHISAWYMETKLCEGALP 180
           SID+LQ+TQF L  +  L A F++T+T TNPN+KIGIYYEGGSHI  WY  TKLCEG+LP
Sbjct: 121 SIDRLQITQFNLSSDSSLSAAFDVTITATNPNEKIGIYYEGGSHIGVWYSGTKLCEGSLP 180

Query: 181 KFYQGHRNRTVLNVPLVGVTENATALFTTLQQEQQQTGSIPLNLNVRQPVRIKLGSLKLM 240
           KFYQGH N TVLNVPL G T++A  L T+LQQ+QQ TG IPLNL V+QPVRIKLG LKL 
Sbjct: 181 KFYQGHENTTVLNVPLTGHTQDAAGLLTSLQQQQQATGIIPLNLRVKQPVRIKLGKLKLF 240

Query: 241 KVKFSATCRLLVDSVSANNDIVIKNSSCKFKLRL 275
           ++KF   C+L VDS+S NNDI I+NSSCKF L L
Sbjct: 241 EIKFLVKCKLDVDSLSTNNDISIRNSSCKFSLNL 253

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g09310 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NHL3_ARATH	2.1e-13	28.65	NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1	[more]
YLS9_ARATH	1.0e-12	30.98	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
NHL12_ARATH	3.4e-08	21.67	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1	[more]
Y1816_ARATH	4.9e-07	24.12	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1	[more]

BLAST of Cp4.1LG16g09310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ15_CUCSA	2.5e-122	83.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G269210 PE=4 SV=1	[more]
B9I456_POPTR	8.5e-91	63.87	NDR1/HIN1-LIKE 25 family protein OS=Populus trichocarpa GN=POPTR_0012s12790g PE=...	[more]
B9SX36_RICCO	1.6e-89	61.68	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0303920 PE=4 SV=1	[more]
A0A061FK27_THECC	2.3e-88	63.27	NDR1/HIN1-like 25, putative OS=Theobroma cacao GN=TCM_036392 PE=4 SV=1	[more]
A0A067LEP7_JATCU	4.0e-88	61.68	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07968 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g09310 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65690.1	7.9e-72	50.73	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G36970.1	1.5e-70	50.55	NDR1/HIN1-like 25	[more]
AT1G54540.1	6.7e-55	49.07	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT2G27080.1	2.9e-26	32.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]
AT5G21130.1	2.8e-24	28.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f...	[more]

BLAST of Cp4.1LG16g09310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463889\|ref\|XP_004149663.1\|	3.5e-122	83.21	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659097887\|ref\|XP_008449868.1\|	3.5e-122	83.21	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|566198193\|ref\|XP_002318799.2\|	1.2e-90	63.87	NDR1/HIN1-LIKE 25 family protein [Populus trichocarpa]	[more]
gi\|743857416\|ref\|XP_011030182.1\|	7.9e-90	62.77	PREDICTED: protein YLS9-like [Populus euphratica]	[more]
gi\|255579423\|ref\|XP_002530555.1\|	2.3e-89	61.68	PREDICTED: protein YLS9 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g09310.1	Cp4.1LG16g09310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 145..248 score: 9.6
None	No IPR available	PANTHER	PTHR31852	FAMILY NOT NAMED	coord: 26..274 score: 5.0E
None	No IPR available	PANTHER	PTHR31852:SF1	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 26..274 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG16g09310	Cucsa.152900	Cucumber (Gy14) v1	cgycpeB0409
Cp4.1LG16g09310	CmaCh20G000170	Cucurbita maxima (Rimu)	cmacpeB564
Cp4.1LG16g09310	CmoCh20G000130	Cucurbita moschata (Rifu)	cmocpeB517
Cp4.1LG16g09310	Cla003142	Watermelon (97103) v1	cpewmB287
Cp4.1LG16g09310	Csa4G269210	Cucumber (Chinese Long) v2	cpecuB278
Cp4.1LG16g09310	MELO3C014709	Melon (DHL92) v3.5.1	cpemeB278
Cp4.1LG16g09310	ClCG02G024240	Watermelon (Charleston Gray)	cpewcgB255
Cp4.1LG16g09310	CSPI04G12710	Wild cucumber (PI 183967)	cpecpiB282
Cp4.1LG16g09310	CSPI01G29680	Wild cucumber (PI 183967)	cpecpiB268
Cp4.1LG16g09310	Lsi10G009350	Bottle gourd (USVL1VR-Ls)	cpelsiB227
Cp4.1LG16g09310	MELO3C014709.2	Melon (DHL92) v3.6.1	cpemedB324
Cp4.1LG16g09310	CsaV3_4G017370	Cucumber (Chinese Long) v3	cpecucB0345
Cp4.1LG16g09310	CsaV3_1G042120	Cucumber (Chinese Long) v3	cpecucB0333
Cp4.1LG16g09310	CsGy4G011580	Cucumber (Gy14) v2	cgybcpeB495
Cp4.1LG16g09310	Carg06962	Silver-seed gourd	carcpeB0733
Cp4.1LG16g09310	Carg16979	Silver-seed gourd	carcpeB0654

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG16g09310	Cp4.1LG18g01210	Cucurbita pepo (Zucchini)	cpecpeB287

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG16g09310	Wax gourd	cpewgoB0354
Cp4.1LG16g09310	Cucurbita pepo (Zucchini)	cpecpeB310
Cp4.1LG16g09310	Cucurbita maxima (Rimu)	cmacpeB627
Cp4.1LG16g09310	Cucurbita moschata (Rifu)	cmocpeB576