Lsi06G004390 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G004390
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Locationchr06 : 4802240 .. 4803013 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACCGCGTCCATCCCGCCGACTCCCCCCGTCCGAGCACCTCCTCCACCGTCTCCGACTCCAAGCCTCCTTCTCCACCGCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAGATATACCGCGTTCCGCCCCCCGAAAATGCTTACCGCTTCCAACTCTACACTCGCCGCAAGCACCATCGCAGCCGCTGCTGTTCCTGCGTCTTTTGGCTACTCGGTATTCTCACCGTCCTCATCGTTCTTCTAGGTATTTCCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGACGCCATTGCCATTTCTGGACTGAACTTAACCGCCTCGTCCTCAGCCGCGATCTCGCCTGTGTTCGATCTGACTGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACAGGACAGGTAGTTCAGTTCAAATCTATTTCTCTGATGAGAAGCTTTCCGACGGCGTTTTGCCTGATTTCTTCCAGCCTTCGAATAACGTCACTGTGTTTCGATCTTCTGTGAGAGGCTCCGGCGTTAACTTGTCGAGTACAACGAAGAACACACTGATTGATTCGCAGAAACGGCGGGCGGTGGCGTTGAAGGTGGAGATTGGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGACTTGGAAGATGAGAGTGAAGGTAATCTGTGATGTGACGGTGGATCAGTTGACGGCGGCGGCGAAGATTGTTTCGAAGAATTGCGATTACAGTGTGAAGCTTTGGTAG

mRNA sequence

ATGGCCGACCGCGTCCATCCCGCCGACTCCCCCCGTCCGAGCACCTCCTCCACCGTCTCCGACTCCAAGCCTCCTTCTCCACCGCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAGATATACCGCGTTCCGCCCCCCGAAAATGCTTACCGCTTCCAACTCTACACTCGCCGCAAGCACCATCGCAGCCGCTGCTGTTCCTGCGTCTTTTGGCTACTCGGTATTCTCACCGTCCTCATCGTTCTTCTAGGTATTTCCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGACGCCATTGCCATTTCTGGACTGAACTTAACCGCCTCGTCCTCAGCCGCGATCTCGCCTGTGTTCGATCTGACTGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACAGGACAGGTAGTTCAGTTCAAATCTATTTCTCTGATGAGAAGCTTTCCGACGGCGTTTTGCCTGATTTCTTCCAGCCTTCGAATAACGTCACTGTGTTTCGATCTTCTGTGAGAGGCTCCGGCGTTAACTTGTCGAGTACAACGAAGAACACACTGATTGATTCGCAGAAACGGCGGGCGGTGGCGTTGAAGGTGGAGATTGGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGACTTGGAAGATGAGAGTGAAGGTAATCTGTGATGTGACGGTGGATCAGTTGACGGCGGCGGCGAAGATTGTTTCGAAGAATTGCGATTACAGTGTGAAGCTTTGGTAG

Coding sequence (CDS)

ATGGCCGACCGCGTCCATCCCGCCGACTCCCCCCGTCCGAGCACCTCCTCCACCGTCTCCGACTCCAAGCCTCCTTCTCCACCGCCCGGCACCTACGTCATCCAGCTTCCCAAGGACCAGATATACCGCGTTCCGCCCCCCGAAAATGCTTACCGCTTCCAACTCTACACTCGCCGCAAGCACCATCGCAGCCGCTGCTGTTCCTGCGTCTTTTGGCTACTCGGTATTCTCACCGTCCTCATCGTTCTTCTAGGTATTTCCGTCGCCGTTTTCTACTTAGTCGTTCGCCCTAAATCGCCTAATTACTCGATCGACGCCATTGCCATTTCTGGACTGAACTTAACCGCCTCGTCCTCAGCCGCGATCTCGCCTGTGTTCGATCTGACTGTTCGAGCGGATAATCCGAACAAGAAGATCGGAATCTATTACAGGACAGGTAGTTCAGTTCAAATCTATTTCTCTGATGAGAAGCTTTCCGACGGCGTTTTGCCTGATTTCTTCCAGCCTTCGAATAACGTCACTGTGTTTCGATCTTCTGTGAGAGGCTCCGGCGTTAACTTGTCGAGTACAACGAAGAACACACTGATTGATTCGCAGAAACGGCGGGCGGTGGCGTTGAAGGTGGAGATTGGAGCGCCGATTAAACTGAAAATAGGATCGGTGAAGACTTGGAAGATGAGAGTGAAGGTAATCTGTGATGTGACGGTGGATCAGTTGACGGCGGCGGCGAAGATTGTTTCGAAGAATTGCGATTACAGTGTGAAGCTTTGGTAG

Protein sequence

MADRVHPADSPRPSTSSTVSDSKPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW
Homology
[Close]
BLAST of Lsi06G004390 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.6e-12
Identity = 54/216 (25.00%), Postives = 107/216 (49.54%), Query Frame = 1 

Query: 44  VPPPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYS 103
           VPPP      + Y RR H R   C  +   + ++  LIV+LG++  +F+L+VRP++  + 
Sbjct: 16  VPPPAP----KGYYRRGHGRGCGCCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFH 75

Query: 104 IDAIAISGLNLTASSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVL 163
           +   +++  + T S    +     LTV   NPNK+IG+YY        Y+  ++ S   L
Sbjct: 76  VTDASLTRFDHT-SPDNILRYNLALTVPVRNPNKRIGLYY-DRIEAHAYYEGKRFSTITL 135

Query: 164 PDFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAV-ALKVEIGAPIKLKIGSVK 223
             F+Q   N TV   + +G  + + +  ++  +++++   V  ++++    ++ K+G +K
Sbjct: 136 TPFYQGHKNTTVLTPTFQGQNLVIFNAGQSRTLNAERISGVYNIEIKFRLRVRFKLGDLK 195

Query: 224 TWKMRVKVICD------VTVDQLTAAAKIVSKNCDY 253
             +++ KV CD       T +  T  + +    CD+
Sbjct: 196 FRRIKPKVDCDDLRLPLSTSNGTTTTSTVFPIKCDF 225

[Close]
BLAST of Lsi06G004390 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 44/175 (25.14%), Postives = 85/175 (48.57%), Query Frame = 1 

Query: 66  CCSCVFW--LLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAIS 125
           CC C     +  IL  + VLLGI+  + +L+ RP +  + +    ++   L  +++   +
Sbjct: 39  CCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYN 98

Query: 126 PVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLS-DGVLPDFFQPSNNVTVFRSSVRG 185
              + T+R  NPN++IG+YY     V+ Y+ D++      +  F+Q   N TV  + + G
Sbjct: 99  LDLNFTIR--NPNRRIGVYY-DEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVG 158

Query: 186 SG-VNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTV 237
              V L    +  L +    +   +  ++   I+ K G +K+W+ + K+ CD+ V
Sbjct: 159 QQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKCDLKV 210

[Close]
BLAST of Lsi06G004390 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.3e-06
Identity = 38/173 (21.97%), Postives = 79/173 (45.66%), Query Frame = 1 

Query: 73  LLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAISPVFDLTVRA 132
           + G++   I+++ I++ + +++++P  P + +    +   NL  S    ++  F +T+ +
Sbjct: 21  ICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNL--SQPNLLTSNFQITIAS 80

Query: 133 DNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRSSVRGSGVNLSSTTK 192
            N N +IGIYY        Y + +      +P  +Q      V+   V G+ V ++    
Sbjct: 81  RNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNSVPIAPFNA 140

Query: 193 NTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVDQLTAAAKI 246
             L D Q R  V L +     ++ K+G++ T K  + V C   ++    AA +
Sbjct: 141 VALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGV 191

[Close]
BLAST of Lsi06G004390 vs. TrEMBL
Match: A0A0A0LX01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601000 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 8.5e-101
Identity = 200/260 (76.92%), Postives = 230/260 (88.46%), Query Frame = 1 

Query: 1   MADRVHP-ADSPRPSTSSTVSDS-KPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTR 60
           MADRVHP ADSPRPSTSST+SD+ KP SPPPGTYVIQLPKDQIYR+PPPENA+RF+LYTR
Sbjct: 1   MADRVHPTADSPRPSTSSTLSDTTKPSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTR 60

Query: 61  RKHHR-SRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTAS 120
           + H R +RC SC+F LL IL +LI+LLGI++AVFY VVRPKSPNYSIDAI+ISGLN   S
Sbjct: 61  QSHRRRNRCRSCLFCLLAILAILIILLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTS 120

Query: 121 SSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFR 180
           S  AISPVF+L+VRADNPNKKIGIYY TGSSV+IY S+EKLS+GVLPDFFQPS NV+V R
Sbjct: 121 S--AISPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLR 180

Query: 181 SSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVD 240
           + VRG+GVNLSS  KN +I+  K+RAV LKVEIG PIK+KIGSVK+WK++VKV CDVTVD
Sbjct: 181 AVVRGAGVNLSSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVD 240

Query: 241 QLTAAAKIVSKNCDYSVKLW 258
           +LTAAAKIV KNCDYSVK+W
Sbjct: 241 ELTAAAKIVKKNCDYSVKIW 258

[Close]
BLAST of Lsi06G004390 vs. TrEMBL
Match: A0A0S3RK74_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G055600 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.4e-79
Identity = 158/273 (57.88%), Postives = 199/273 (72.89%), Query Frame = 1 

Query: 1   MADRVHPADSP---------RPSTSSTVSD------SKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP DSP          P  SS V        S+ P P PGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPRDSPPLSAESQSASPQDSSVVPQALRPPPSEKPVPSPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           P ENA R+  YT RKH RSRCCSC  WL+GIL++LIVLLGI+  +FYLV RPK+P Y+I+
Sbjct: 61  PAENARRYDQYTHRKHRRSRCCSCCCWLIGILSILIVLLGIAAGIFYLVFRPKAPKYTIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IAI G+N+T+ SS  AISP F++TV+ADNPN KIGIYY   SS +++++D +L +G LP
Sbjct: 121 DIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYLKDSSAEVFYNDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F QPSNNVTVF   ++G+G+ L S  + +L++SQ +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VK+ CDVTV+ LTA AKIVSK CDY V LW
Sbjct: 241 KITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]
BLAST of Lsi06G004390 vs. TrEMBL
Match: A0A0L9UVC0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g041700 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 2.4e-79
Identity = 158/273 (57.88%), Postives = 199/273 (72.89%), Query Frame = 1 

Query: 1   MADRVHPADSP---------RPSTSSTVSD------SKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP DSP          P  SS V        S+ P P PGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPRDSPPLSAESQSASPQDSSVVPQALRPPPSEKPVPSPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           P ENA R+  YT RKH RSRCCSC  WL+GIL++LIVLLGI+  +FYLV RPK+P Y+I+
Sbjct: 61  PAENARRYDQYTHRKHRRSRCCSCCCWLIGILSILIVLLGIAAGIFYLVFRPKAPKYTIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IAI G+N+T+ SS  AISP F++TV+ADNPN KIGIYY   SS +++++D +L +G LP
Sbjct: 121 DIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYLKDSSAEVFYNDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F QPSNNVTVF   ++G+G+ L S  + +L++SQ +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VK+ CDVTV+ LTA AKIVSK CDY V LW
Sbjct: 241 KITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]
BLAST of Lsi06G004390 vs. TrEMBL
Match: I1JIQ7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G274400 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 7.7e-78
Identity = 154/273 (56.41%), Postives = 198/273 (72.53%), Query Frame = 1 

Query: 1   MADRVHPADSPR---------PSTSSTVS------DSKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP+ SP          P  SS V        S+ P PPPGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPSHSPSVSADSQPASPQDSSVVPKPPLPPSSEKPVPPPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           PPENA R+  YTRRKH RSRCC C  WL+GIL +L+V L I+  V YLV RP+ P YSI+
Sbjct: 61  PPENARRYDQYTRRKHRRSRCCCCFCWLIGILFILVVFLAIAAGVLYLVFRPEEPKYSIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IA+ G+NLT+ SS+AA+SPVF++TV+ADNPN KIGI Y   SS ++++ D +L +G LP
Sbjct: 121 NIAVRGINLTSPSSTAAMSPVFNVTVKADNPNDKIGIRYLKDSSAEVFYKDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F+QPSNNVTVF +++RG G+ L S  +  L+++Q +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFYQPSNNVTVFGTALRGDGIELRSEVRRALLEAQTKRRVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VKV C +TV++LTA AKIVSK C+Y V LW
Sbjct: 241 KITVKVNCHMTVNELTARAKIVSKRCNYDVDLW 273

[Close]
BLAST of Lsi06G004390 vs. TrEMBL
Match: I1M7A6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G041700 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77
Identity = 155/273 (56.78%), Postives = 198/273 (72.53%), Query Frame = 1 

Query: 1   MADRVHPADSPRPSTSS---TVSDS----KPPSPP--------PGTYVIQLPKDQIYRVP 60
           MADRVHP+ SP  S  S   +  DS    KPPSPP        PGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPSHSPSVSADSQPPSPQDSSVVPKPPSPPSPEKPVPPPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           PPENA R+  Y RRKH RSRCC C  WL+GIL +L+VLL I+  V YLV RP++P YSI+
Sbjct: 61  PPENARRYDQYARRKHRRSRCCCCFCWLIGILFILVVLLAIAAGVLYLVFRPEAPKYSIE 120

Query: 121 AIAISGLNLTASSS-AAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            I + G+NLT+ SS AAISP F++TV+ADNPN KIGI Y   SS ++++ D +L +G LP
Sbjct: 121 NITVRGINLTSPSSVAAISPEFNVTVKADNPNDKIGIRYLKDSSAEVFYKDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F+QPSNNVTVF +++RG G+ L S  +  L+++Q +R V L V I AP+K+K+GS++TW
Sbjct: 181 AFYQPSNNVTVFGTALRGDGIELRSEDRRALLEAQTKRRVPLTVRIRAPVKIKVGSIRTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VKV CDVTV++LTA AKIVSK C Y V LW
Sbjct: 241 KITVKVNCDVTVNELTAQAKIVSKRCSYDVDLW 273

[Close]
BLAST of Lsi06G004390 vs. TAIR10
Match: AT2G27080.1 (AT2G27080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 248.8 bits (634), Expect = 3.6e-66
Identity = 131/262 (50.00%), Postives = 185/262 (70.61%), Query Frame = 1 

Query: 1   MADRVHPADSPRPSTSSTVSDS-----KPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQL 60
           MA+RV+PADSP  S   + + S     K P+PPP TYVIQ+PKDQIYR+PPPENA+RF+ 
Sbjct: 1   MAERVYPADSPPQSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQ 60

Query: 61  YTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLT 120
            +R+K +RS C  C    L  + +LIVL GIS AV YL+ RP++P YSI+  ++SG+NL 
Sbjct: 61  LSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINL- 120

Query: 121 ASSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTV 180
            +S++ ISP F++TVR+ N N KIG+YY   SSV +Y++D  +S+GV+P F+QP+ NVTV
Sbjct: 121 -NSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTV 180

Query: 181 FRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVT 240
            +  + GS + L+S  +  + +   ++ V  K++I AP+K+K GSVKTW M V V CDVT
Sbjct: 181 VKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVT 240

Query: 241 VDQLTAAAKIVSKNCDYSVKLW 258
           VD+LTA ++IVS+ C + V LW
Sbjct: 241 VDKLTAPSRIVSRKCSHDVDLW 260

[Close]
BLAST of Lsi06G004390 vs. TAIR10
Match: AT5G21130.1 (AT5G21130.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 204.5 bits (519), Expect = 7.7e-53
Identity = 109/254 (42.91%), Postives = 163/254 (64.17%), Query Frame = 1 

Query: 6   HPADSPRPSTSSTVSDSKPPS---PPPGTYVIQLPKDQIYRVPPPENAYRFQLYTRRKHH 65
           HP+     S+SS  S     S   PPPGTYVI+LPKDQIYRVPPPENA+R++  +RRK +
Sbjct: 29  HPSLDTNDSSSSRYSVDSQKSRIGPPPGTYVIKLPKDQIYRVPPPENAHRYEYLSRRKTN 88

Query: 66  RSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAI 125
           +S C  C+ + L  L ++IVL  I+   FYLV +P  P +S+  ++++G+NLT  SS+  
Sbjct: 89  KSCCRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLT--SSSPF 148

Query: 126 SPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRSSVRG 185
           SPV  + +R+ N   K+G+ Y  G+   ++F+  KL +G    F QP+ NVTV  + ++G
Sbjct: 149 SPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKG 208

Query: 186 SGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVDQLTAA 245
           S V L S+++  L +SQK+  V   + I AP+K K+GSV TW M + V C +TVD+LTA+
Sbjct: 209 SSVKLKSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTITVDCKITVDKLTAS 268

Query: 246 AKIVSKNCDYSVKL 257
           A + ++NC+  + L
Sbjct: 269 ATVKTENCETGLSL 280

[Close]
BLAST of Lsi06G004390 vs. TAIR10
Match: AT5G36970.1 (AT5G36970.1 NDR1/HIN1-like 25)

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30
Identity = 73/202 (36.14%), Postives = 119/202 (58.91%), Query Frame = 1 

Query: 59  RKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASS 118
           +K  RS  C CV + L +L +LIV++G  V + YLV RPK P+Y+ID + ++   L    
Sbjct: 51  KKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDL 110

Query: 119 SAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRS 178
           S  +S  F++T+ A NPN+KIGIYY  GS + + +   ++S+G LP F+Q   N T+   
Sbjct: 111 S--LSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTII-- 170

Query: 179 SVRGSGVNLSSTTKNTLIDSQKR--RAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTV 238
            V  +G   ++T+  T +  Q+R   ++ L++ +  P+++K+G +K  K+R  V C V+V
Sbjct: 171 LVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSV 230

Query: 239 DQLTA--AAKIVSKNCDYSVKL 257
           D L A    ++ S NC Y  +L
Sbjct: 231 DSLAANSVIRVRSSNCKYRFRL 248

[Close]
BLAST of Lsi06G004390 vs. TAIR10
Match: AT1G65690.1 (AT1G65690.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-29
Identity = 82/256 (32.03%), Postives = 137/256 (53.52%), Query Frame = 1 

Query: 4   RVHPADSPRPSTSSTVSDSKPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTRRKHHR 63
           +++P   P  +T+   +    P  P G+   +       +VP  +   RF      K  R
Sbjct: 6   KIYPVQDPEAATARPTA----PLVPRGSS--RSEHGDPSKVPLNQRPQRFVPLAPPKKRR 65

Query: 64  SRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAIS 123
           S CC C  +    L +L+V +G S+ + YLV +PK P+YSID + ++   L   SS  ++
Sbjct: 66  SCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSS--LT 125

Query: 124 PVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRSSVRGS 183
             F++T+ A NPN+KIGIYY  GS + +++ + +LS+G LP F+Q   N TV    + G 
Sbjct: 126 TAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVEMTGQ 185

Query: 184 GVNLSSTTKNTLIDSQKRRA-VALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVDQLTA- 243
             N +S  + TL + Q+R   + L++ +  P+++K G +K +++R  V C V VD L   
Sbjct: 186 TQN-ASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDSLATN 245

Query: 244 -AAKIVSKNCDYSVKL 257
              KI S +C + ++L
Sbjct: 246 NVIKIQSSSCKFRLRL 252

[Close]
BLAST of Lsi06G004390 vs. TAIR10
Match: AT1G54540.1 (AT1G54540.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 112.5 bits (280), Expect = 4.0e-25
Identity = 74/243 (30.45%), Postives = 124/243 (51.03%), Query Frame = 1 

Query: 13  PSTSSTVSDSKPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTRRKHHRSRCCSCVFW 72
           P      + +K  +P PG  V+ LP  +   +PPP    +         +R+ CC    W
Sbjct: 9   PVLQMEANKTKTTTPAPGKTVL-LPVQR--PIPPPVIPSK---------NRNMCCKIFCW 68

Query: 73  LLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTASSSAAISPVFDLTVRA 132
           +L +L + ++ L I+VAV Y V  PK P+Y ++++ ++ L +    S  +S  F + + A
Sbjct: 69  VLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLS--LSAEFKVEITA 128

Query: 133 DNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFRSSVRGSGVNLSSTTK 192
            NPN+KIGIYY  G  + +++   KL +G +P F+Q   NVT    ++ G      +T  
Sbjct: 129 RNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALTGR-AQYGNTVL 188

Query: 193 NTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVDQLTAAAKIVSKNCDY 252
             L   Q+   V L +++ AP+ +K+G++K  K+R+   C + VD L+    I  K  D 
Sbjct: 189 AALQQQQQTGRVPLDLKVNAPVAIKLGNLKMKKIRILGSCKLVVDSLSTNNNINIKASDC 236

Query: 253 SVK 256
           S K
Sbjct: 249 SFK 236

[Close]
BLAST of Lsi06G004390 vs. NCBI nr
Match: gi|659100419|ref|XP_008451090.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 1.8e-104
Identity = 205/261 (78.54%), Postives = 235/261 (90.04%), Query Frame = 1 

Query: 1   MADRVHPA-DSPRPSTSSTVSDS-KPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTR 60
           MADRVHP  DSPRPSTSST+SD+ KPPSPPPGTYVIQLPKDQIYRVPPPENA+RFQLYTR
Sbjct: 1   MADRVHPTVDSPRPSTSSTLSDTTKPPSPPPGTYVIQLPKDQIYRVPPPENAHRFQLYTR 60

Query: 61  R-KHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNL-TA 120
           + +  R+ C SC+F LL IL +LI+LLGI+VAVFYLVVRPKSPNYSIDAI++SGLNL T+
Sbjct: 61  QNRRRRNPCRSCLFCLLAILILLIILLGITVAVFYLVVRPKSPNYSIDAISVSGLNLLTS 120

Query: 121 SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVF 180
           SSS+AISP+F+LTVRADNPNKKIGIYY TGSSV+IYFS+EKLS+GVLPDFFQP+ NV+V 
Sbjct: 121 SSSSAISPLFNLTVRADNPNKKIGIYYLTGSSVRIYFSNEKLSEGVLPDFFQPAKNVSVL 180

Query: 181 RSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTV 240
           RS VRG+GVNLSS  KN LI+S K+R V LKVEIG PIK+K+G+VK+WKMRVKV CDVTV
Sbjct: 181 RSVVRGTGVNLSSGAKNGLIESVKQRVVVLKVEIGVPIKVKVGAVKSWKMRVKVNCDVTV 240

Query: 241 DQLTAAAKIVSKNCDYSVKLW 258
           D+LT AAKIV KNCDYSVK+W
Sbjct: 241 DELTTAAKIVKKNCDYSVKIW 261

[Close]
BLAST of Lsi06G004390 vs. NCBI nr
Match: gi|449452811|ref|XP_004144152.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 1.2e-100
Identity = 200/260 (76.92%), Postives = 230/260 (88.46%), Query Frame = 1 

Query: 1   MADRVHP-ADSPRPSTSSTVSDS-KPPSPPPGTYVIQLPKDQIYRVPPPENAYRFQLYTR 60
           MADRVHP ADSPRPSTSST+SD+ KP SPPPGTYVIQLPKDQIYR+PPPENA+RF+LYTR
Sbjct: 1   MADRVHPTADSPRPSTSSTLSDTTKPSSPPPGTYVIQLPKDQIYRLPPPENAHRFKLYTR 60

Query: 61  RKHHR-SRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSIDAIAISGLNLTAS 120
           + H R +RC SC+F LL IL +LI+LLGI++AVFY VVRPKSPNYSIDAI+ISGLN   S
Sbjct: 61  QSHRRRNRCRSCLFCLLAILAILIILLGITLAVFYFVVRPKSPNYSIDAISISGLNNLTS 120

Query: 121 SSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLPDFFQPSNNVTVFR 180
           S  AISPVF+L+VRADNPNKKIGIYY TGSSV+IY S+EKLS+GVLPDFFQPS NV+V R
Sbjct: 121 S--AISPVFNLSVRADNPNKKIGIYYLTGSSVRIYSSNEKLSEGVLPDFFQPSKNVSVLR 180

Query: 181 SSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTWKMRVKVICDVTVD 240
           + VRG+GVNLSS  KN +I+  K+RAV LKVEIG PIK+KIGSVK+WK++VKV CDVTVD
Sbjct: 181 AVVRGAGVNLSSGAKNEIIEWVKQRAVLLKVEIGVPIKVKIGSVKSWKIKVKVNCDVTVD 240

Query: 241 QLTAAAKIVSKNCDYSVKLW 258
           +LTAAAKIV KNCDYSVK+W
Sbjct: 241 ELTAAAKIVKKNCDYSVKIW 258

[Close]
BLAST of Lsi06G004390 vs. NCBI nr
Match: gi|920703488|gb|KOM46713.1| (hypothetical protein LR48_Vigan07g041700 [Vigna angularis])

HSP 1 Score: 303.5 bits (776), Expect = 3.5e-79
Identity = 158/273 (57.88%), Postives = 199/273 (72.89%), Query Frame = 1 

Query: 1   MADRVHPADSP---------RPSTSSTVSD------SKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP DSP          P  SS V        S+ P P PGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPRDSPPLSAESQSASPQDSSVVPQALRPPPSEKPVPSPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           P ENA R+  YT RKH RSRCCSC  WL+GIL++LIVLLGI+  +FYLV RPK+P Y+I+
Sbjct: 61  PAENARRYDQYTHRKHRRSRCCSCCCWLIGILSILIVLLGIAAGIFYLVFRPKAPKYTIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IAI G+N+T+ SS  AISP F++TV+ADNPN KIGIYY   SS +++++D +L +G LP
Sbjct: 121 DIAIRGINVTSPSSDVAISPEFNVTVKADNPNDKIGIYYLKDSSAEVFYNDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F QPSNNVTVF   ++G+G+ L S  + +L++SQ +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VK+ CDVTV+ LTA AKIVSK CDY V LW
Sbjct: 241 KITVKLDCDVTVNDLTAQAKIVSKRCDYEVDLW 273

[Close]
BLAST of Lsi06G004390 vs. NCBI nr
Match: gi|950987645|ref|XP_014503816.1| (PREDICTED: protein YLS9-like [Vigna radiata var. radiata])

HSP 1 Score: 301.2 bits (770), Expect = 1.7e-78
Identity = 155/273 (56.78%), Postives = 198/273 (72.53%), Query Frame = 1 

Query: 1   MADRVHPADSP---------RPSTSSTVSD------SKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP DSP          P  SS V        S+ P PPPGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPRDSPPISAESQSASPQDSSVVPQALRPPPSEKPVPPPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           P ENA R+  YT RKH RSRCC C  WL+GIL +LIVLLGI+  +FYLV RP++P Y+I+
Sbjct: 61  PAENARRYDQYTHRKHRRSRCCCCCCWLIGILFILIVLLGIAAGIFYLVFRPEAPKYTIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IA+ G+N+T+ SS   ISP F++TV+ADNPN KIGIYY   SS +++++D +L +G +P
Sbjct: 121 DIAVRGINVTSPSSDVTISPEFNVTVKADNPNDKIGIYYLKDSSAEVFYNDARLCNGAIP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F QPSNNVTVF   ++G+G+ L S  + +L++SQ +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFHQPSNNVTVFGMVLKGNGIELRSEDRKSLVESQTKRKVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VKV CDVTV++LTA AKIVSK CDY V LW
Sbjct: 241 KITVKVDCDVTVNELTAQAKIVSKRCDYKVDLW 273

[Close]
BLAST of Lsi06G004390 vs. NCBI nr
Match: gi|356501342|ref|XP_003519484.1| (PREDICTED: protein YLS9 [Glycine max])

HSP 1 Score: 298.5 bits (763), Expect = 1.1e-77
Identity = 154/273 (56.41%), Postives = 198/273 (72.53%), Query Frame = 1 

Query: 1   MADRVHPADSPR---------PSTSSTVS------DSKPPSPPPGTYVIQLPKDQIYRVP 60
           MADRVHP+ SP          P  SS V        S+ P PPPGTYVI++PKDQ+YRVP
Sbjct: 1   MADRVHPSHSPSVSADSQPASPQDSSVVPKPPLPPSSEKPVPPPGTYVIKIPKDQVYRVP 60

Query: 61  PPENAYRFQLYTRRKHHRSRCCSCVFWLLGILTVLIVLLGISVAVFYLVVRPKSPNYSID 120
           PPENA R+  YTRRKH RSRCC C  WL+GIL +L+V L I+  V YLV RP+ P YSI+
Sbjct: 61  PPENARRYDQYTRRKHRRSRCCCCFCWLIGILFILVVFLAIAAGVLYLVFRPEEPKYSIE 120

Query: 121 AIAISGLNLTA-SSSAAISPVFDLTVRADNPNKKIGIYYRTGSSVQIYFSDEKLSDGVLP 180
            IA+ G+NLT+ SS+AA+SPVF++TV+ADNPN KIGI Y   SS ++++ D +L +G LP
Sbjct: 121 NIAVRGINLTSPSSTAAMSPVFNVTVKADNPNDKIGIRYLKDSSAEVFYKDARLCNGALP 180

Query: 181 DFFQPSNNVTVFRSSVRGSGVNLSSTTKNTLIDSQKRRAVALKVEIGAPIKLKIGSVKTW 240
            F+QPSNNVTVF +++RG G+ L S  +  L+++Q +R V L V I AP+K+K+GSVKTW
Sbjct: 181 AFYQPSNNVTVFGTALRGDGIELRSEVRRALLEAQTKRRVPLTVRIRAPVKIKVGSVKTW 240

Query: 241 KMRVKVICDVTVDQLTAAAKIVSKNCDYSVKLW 258
           K+ VKV C +TV++LTA AKIVSK C+Y V LW
Sbjct: 241 KITVKVNCHMTVNELTARAKIVSKRCNYDVDLW 273

The following BLAST results are available for this feature:
BLAST of Lsi06G004390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YLS9_ARATH3.6e-1225.00Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1[more]
NHL3_ARATH2.2e-0925.14NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1[more]
NHL12_ARATH2.3e-0621.97NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1[more]
BLAST of Lsi06G004390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX01_CUCSA8.5e-10176.92Uncharacterized protein OS=Cucumis sativus GN=Csa_1G601000 PE=4 SV=1[more]
A0A0S3RK74_PHAAN2.4e-7957.88Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G055600 PE=... [more]
A0A0L9UVC0_PHAAN2.4e-7957.88Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g041700 PE=4 SV=1[more]
I1JIQ7_SOYBN7.7e-7856.41Uncharacterized protein OS=Glycine max GN=GLYMA_02G274400 PE=4 SV=1[more]
I1M7A6_SOYBN2.3e-7756.78Uncharacterized protein OS=Glycine max GN=GLYMA_14G041700 PE=4 SV=1[more]
BLAST of Lsi06G004390 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27080.13.6e-6650.00 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G21130.17.7e-5342.91 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT5G36970.15.4e-3036.14 NDR1/HIN1-like 25[more]
AT1G65690.11.6e-2932.03 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
AT1G54540.14.0e-2530.45 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein f... [more]
BLAST of Lsi06G004390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100419|ref|XP_008451090.1|1.8e-10478.54PREDICTED: protein YLS9-like [Cucumis melo][more]
gi|449452811|ref|XP_004144152.1|1.2e-10076.92PREDICTED: protein YLS9-like [Cucumis sativus][more]
gi|920703488|gb|KOM46713.1|3.5e-7957.88hypothetical protein LR48_Vigan07g041700 [Vigna angularis][more]
gi|950987645|ref|XP_014503816.1|1.7e-7856.78PREDICTED: protein YLS9-like [Vigna radiata var. radiata][more]
gi|356501342|ref|XP_003519484.1|1.1e-7756.41PREDICTED: protein YLS9 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G004390.1Lsi06G004390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA-14PFAMPF03168LEA_2coord: 129..230
score: 9.1
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 7..257
score: 3.0E
NoneNo IPR availablePANTHERPTHR31852:SF0LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEINcoord: 7..257
score: 3.0E