Cucsa.120630 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.120630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Plastid lipid-associated protein
Location	scaffold00998 : 2713775 .. 2717214 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGGTATCTTGTCTCTGCCCCTGTCTCTTGTTTGGTTGAATTGCTGTTTGAGTTTAATGGGTGTCTCTTGAAATCAGAAAATTAGTAATTTTGTATATAATAATGATTCTAGAGGCTACTTAGTATGCAATCTCAGATATGTGGGAGAACTTAGCTCTAGTTTCAGAGGTCTCATAGAGGATTGATTAATTTTGAGTGTGGTGGATGGAATGAAATGGGTTTGTCATGGGGTTTAATTTTAAGCTCATGTTCAGATGGAGCTTTTGGACCAGTTTCTAATTCCAAACTCATTCATTTTCCGTAGTTTTCAACTCAACTCTCCTTTCCACCATTTTCATGCTTTCCTTAACCATATCTTATAAAACATAGAGACCTATTATTTGTCACTCTGCTTATTTTTGTTATCTATTAAATTCATGTGCAACTATTTATTCCAAAAAaCTCTTTAATTTATGGTTGAACTGCTCGATTAAGTTTACGTGCAACTATTGCAAAGCATCTAGATATTGAAATTCTACGTACTTTATGTTTATTATTGTTTTGTAGATAATGATGTTGAGTTTGAATCTCACTGTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTGAGTAATTATCTTTATGATTATGATCTCGTGGGTTGTATTATTTGTGTGCCTCAAATGCATGGTTTCATTTTACTATTTGCAGCTTTCAGTTTAAGACCAAAACATGCTTTAAACCAAATATTAAAATTTCGAGAACAACGTTATATTTCAAATTGACATTCAAAAGCTCCCTAAATCCATAGTGGCTACCTGGAGAGGCAATAAGACAATTAACTAATTAATTCTCAAATACTAGTTAATATAAATTAACAACCAAGCTACTATTAACTAAATTATACATATAATTTTGTAATTCTTCTCATCGACATATCTATAGTATAGTATGATATTGCCATACTTTGGACATAATATCTCTCATAACTTTGCTTTTGATTTCATTCAAGAAGAAGCCTCATATTTTGGGGATGGTTGTCCTAAATTCTAATTTATGTACTCGTAATGTTTCCCTTATCTAGCTAACATTAGACTTAAATCACAGTGTCAACAGGAATAGGATGAAAGAAGAAGAGGGAGCTAGGTGGGAATTTAACCCAATCATGGATATTGAGAATAATGTTGATTGATATAGGATTTAAGATGTATTGTTGAGCATAAGTCTACACGATCATCTGAAACAAGTTTGGTTCTTTGAGAGAAATCTCGATTTTAAAGTTATATTAGTTATGAGTAAGAAAGGCAATTGTTTAATAGTTATAGGCACGTGTAAGGATTTGATAGAATCCCAAACACAGGAGAAGTGGAGAAAATACCAATGGCCTATCAACAAACTTTCTAGATGCCTCTCTCTCTCTGAATCTCACAATAAACAATCCCACCCAAAATGATCCTCTCCCTCCAAAACCTTAATTCTATTTTTtACCAAGTCACTCCTAGCAAATTACCAGTTTCCACTATGCCCTTGCTAATTATATAACCAAGTCATGACATGGTGTAATTTATATAAATCCGAGTTTAAAATTAGATGATTCAAAGAAAGAACTCCTTTTAAGCATATGATCTACAGCAGCAATGGCCCTGTATCTAAGAAACGCATTCGCTGGAATAAATCCACACAAAATTTTTATAGACTGATACGTGCTTCACAACAAGCTAACATATTAAGCGTATGAGAAGAAATACGCACCAGACCCCTAAGTAATGACTGATAACTTCAAAGGTACTAACTTTCTCATAAGTTAAAAATAAGTTCTTGATTGAGATCCACCTACTATACCCTTCCATGAGATCCAAAGGAGTGTGTTTATCACTAGACCAATTCTCAATAAGAAAATGGAAATCACCATAGAGCTTCAGTTTTCTTTGGTATATCTAAAACTGTTGGGGAGTTACCATCTTCAAGTTTGAGTAAAGCATTATCTGCCATGTAAGGGTTAAGATAAACTGAGATCTTATAATGATCTTCCAAAGCATCTTTAATTTCTTTACAGTTATAAATTATGATCAAACATCACTACATTCTGGCCACATCCCTGCAAAATCAGAATCCGTATAGACGAACAATTTAAGTAATTTTGAAGCAAAAGGGGACCATACAGAGAAGATTTGTTTTTtACTCCATTTATCTATGTTCACATCTCCAGCAACTTGTGGTTTGGACATTGATTCCTATATCTAAACTCGAACAAGGACTATTTCTAGATCATAAAGATCCAACTTGGGCTGCAGTTTTGGAGACATTTTTGTAATTATCTTGTAGGTAGTATCTTACATAGTTAGAAAATCTTTCTTTAAAGGGGTTTCACACtAATTTTTTTTTTTTttTTTTTTtAtGTCTTTtAATTTTTttCTCAACTAAAGCAaCCTTTtCTaTTAAACTTGAAAGGCCTTGTCATGTTCTGCGTTTCTCGTGTTCTTTTTTtGAACTATTTTTTtAGTAATTCAATCATGAACATAAATTGTGGCATTTTCTTTtATTTTCTGTAGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGAAGGCTGAATCACAAGTTTTCAATGGTGCTGTACAAACATGATGTAGTTGATTATAGTTGTGTTACTCATCTAATTTTTCTCCCAAGTAGATTTATCCTTATGGTATCTGTATTCATATCATGCAAGACATGCAACAACTTCTCTCACTCTGTATATATTTAATCTGACAAGTCTTTCCACTTATGATTTATTTATTTATATTTTTtATTTTCTGTTATCTACTTTTTGGAGTGTGTTATCAAAATTCAAACTAGAGTGTTTGAAAACTATACCTATGTAATTTTTGTTTGTTT

mRNA sequence

CCCATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGAAGGCTGAATCACAAGTTTTCAATGGTGCTGTACAAACATGATGTAGTTGATTATAGTTGTGTTACTCATCTAATTTTTCTCCCAAGTAGATTTATCCTTATGGTATCTGTATTCATATCATGCAAGACATGCAACAACTTCTCTCACTCTGTATATATTTAATCTGACAAGTCTTTCCACTTATGatttatttatttatattttttattttCTGTTATCTACTTTTTGGAGTGTGTTATCAAAATTCAAACTAGAGTGTTTGAAAACTATACCTATGTAATTTTTGTTTGTTT

Coding sequence (CDS)

ATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTCCCCTTCTTCCATTACAACCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTATTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGA

Protein sequence

MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE*

Homology

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BLAST of Cucsa.120630 vs. Swiss-Prot
Match: PAP11_ARATH (Probable plastid-lipid-associated protein 11 OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.7e-77
Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 1


Query: 27  KISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDD 86
           + SCS  +  +Q AKR+LL LIS++ RGL+TQK+P+K   IV +I+ +  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVER 206
           +I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGDYLIV+R
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDR 202

Query: 207 APYSWTE 214
           APY+WTE
Sbjct: 203 APYNWTE 209

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BLAST of Cucsa.120630 vs. TrEMBL
Match: A0A0A0KDV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108600 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 9.5e-114
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLSHLPKISCSSIS QSQSAKRQLLTLISDQQRGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

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BLAST of Cucsa.120630 vs. TrEMBL
Match: W9QQ39_9ROSA (Putative plastid-lipid-associated protein 11 OS=Morus notabilis GN=L484_021783 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.0e-88
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 1   MAKSLSLPSLP--FISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQ 60
           MA  L LP++P  F +P     H SH PKI+CSS++ QSQS K++LL LI+ + RGLKTQ
Sbjct: 1   MASCLILPTIPSKFRNPK----HTSHAPKITCSSLTAQSQSGKKELLRLIAGEDRGLKTQ 60

Query: 61  KNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGD 120
           +NP KLASIVK+ID LA LG  +VTT  SLSATWRLLWTTEKEQLFII+KA LFGTRAGD
Sbjct: 61  RNPTKLASIVKAIDALADLGAGAVTTGSSLSATWRLLWTTEKEQLFIIDKASLFGTRAGD 120

Query: 121 VLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFG 180
           VLQVIDVEK+ LNNVITFPPDGVFFVRS+IE+AS QRVNFRFTSAVLRGKNWEIPLPPFG
Sbjct: 121 VLQVIDVEKRRLNNVITFPPDGVFFVRSDIEIASKQRVNFRFTSAVLRGKNWEIPLPPFG 180

Query: 181 QGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           QGWFDTVYLDDEIRVVKDIRGDYL+V+RAPY+W E
Sbjct: 181 QGWFDTVYLDDEIRVVKDIRGDYLVVDRAPYAWKE 211

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BLAST of Cucsa.120630 vs. TrEMBL
Match: A0A0D2PR91_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G175700 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.6e-84
Identity = 160/217 (73.73%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 5   LSLPSLPFISPSSITTHLSHLP--------KISCSSISIQSQSAKRQLLTLISDQQRGLK 64
           +SL +L   SP +++T     P        KI+CSS++ QSQSAK+ LL LISDQ+RGLK
Sbjct: 1   MSLAALTLSSPLTVSTTTKQKPRPPHNPKPKITCSSLTTQSQSAKQHLLNLISDQERGLK 60

Query: 65  TQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRA 124
           TQ +  K  SI+KSID +A LGRN+VTT DSLSATWRLLWTTEKEQLFIIEKA+LFGT+A
Sbjct: 61  TQNDTNKRDSIIKSIDAMAVLGRNTVTTGDSLSATWRLLWTTEKEQLFIIEKAYLFGTQA 120

Query: 125 GDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPP 184
           GDVLQVIDV+ K+LNNVITFPPDGVFFVRS+IE+ASSQRVNF+FTSAVLRGKNWE PLPP
Sbjct: 121 GDVLQVIDVDNKTLNNVITFPPDGVFFVRSSIEIASSQRVNFKFTSAVLRGKNWEFPLPP 180

Query: 185 FGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           FGQGWF+TVYLDDEIRVVKDIR DYL+VERAPY+W E
Sbjct: 181 FGQGWFETVYLDDEIRVVKDIRDDYLVVERAPYNWKE 217

[Close]

BLAST of Cucsa.120630 vs. TrEMBL
Match: A0A067H1B9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027529mg PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.6e-84
Identity = 158/210 (75.24%), Postives = 180/210 (85.71%), Query Frame = 1


Query: 4   SLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQK 63
           SL+LP+    S        +H  +I+CSS + QSQSAK++LL LI+DQ RGLKTQK+P K
Sbjct: 13  SLNLPNCNANSSKRQRRVHNHASRITCSSTTNQSQSAKQELLNLIADQDRGLKTQKDPNK 72

Query: 64  LASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVI 123
            +SI+K+ID +A LG +  TT DSLSATWRLLWTTEKEQLFIIEKA+LFGT+ GDVLQVI
Sbjct: 73  RSSIIKAIDDMAVLGSDMDTTGDSLSATWRLLWTTEKEQLFIIEKAYLFGTQTGDVLQVI 132

Query: 124 DVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFD 183
           DVEKK LNNVITFPPDGVFFVRSNIE+AS QRVNFRFTSAVLRGKNWE+PLPPFG+GWF+
Sbjct: 133 DVEKKVLNNVITFPPDGVFFVRSNIEIASPQRVNFRFTSAVLRGKNWEVPLPPFGKGWFE 192

Query: 184 TVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           TVYLDDEIRVVKDIRGDYL+VERAPY WTE
Sbjct: 193 TVYLDDEIRVVKDIRGDYLVVERAPYQWTE 222

[Close]

BLAST of Cucsa.120630 vs. TrEMBL
Match: A0A061E254_THECC (Plastid-lipid associated protein PAP / fibrillin family protein isoform 1 OS=Theobroma cacao GN=TCM_005617 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83
Identity = 157/211 (74.41%), Postives = 183/211 (86.73%), Query Frame = 1


Query: 5   LSLPSLPFISPSSITTHLSHLP--KISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQ 64
           ++L ++   SP S+ T L   P  KI+CSS++ QSQSAK+ LL LISDQ RGL +Q++P 
Sbjct: 1   MTLVAVTLSSPLSLATKLKRRPHPKITCSSVTTQSQSAKQDLLNLISDQDRGLISQRDPA 60

Query: 65  KLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQV 124
           K  +I+K+ID +A LGR++VTT DSLSATWRLLWTTEKEQLFIIEKAHL GTRAGDVLQV
Sbjct: 61  KRDAIIKAIDAMAILGRDTVTTGDSLSATWRLLWTTEKEQLFIIEKAHLLGTRAGDVLQV 120

Query: 125 IDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWF 184
           IDVEKK+LNNVITFPPDGVFFVRS+IEV SSQRVNF+FTSAVLRGK+WEIPLPPFGQGWF
Sbjct: 121 IDVEKKTLNNVITFPPDGVFFVRSSIEVTSSQRVNFKFTSAVLRGKSWEIPLPPFGQGWF 180

Query: 185 DTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           +TVYLDD+ RVVKDIR DYL+VERAPY+W E
Sbjct: 181 ETVYLDDDFRVVKDIRDDYLVVERAPYNWKE 211

[Close]

BLAST of Cucsa.120630 vs. TAIR10
Match: AT4G00030.1 (AT4G00030.1 Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 289.7 bits (740), Expect = 1.5e-78
Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 1


Query: 27  KISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDD 86
           + SCS  +  +Q AKR+LL LIS++ RGL+TQK+P+K   IV +I+ +  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVER 206
           +I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGDYLIV+R
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDR 202

Query: 207 APYSWTE 214
           APY+WTE
Sbjct: 203 APYNWTE 209

[Close]

BLAST of Cucsa.120630 vs. NCBI nr
Match: gi|449445459|ref|XP_004140490.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.4e-113
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLSHLPKISCSSIS QSQSAKRQLLTLISDQQRGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of Cucsa.120630 vs. NCBI nr
Match: gi|659116544|ref|XP_008458126.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis melo])

HSP 1 Score: 414.8 bits (1065), Expect = 8.9e-113
Identity = 209/213 (98.12%), Postives = 211/213 (99.06%), Query Frame = 1


Query: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAK QLLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of Cucsa.120630 vs. NCBI nr
Match: gi|703072316|ref|XP_010089253.1| (putative plastid-lipid-associated protein 11 [Morus notabilis])

HSP 1 Score: 332.4 bits (851), Expect = 5.8e-88
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 1   MAKSLSLPSLP--FISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQ 60
           MA  L LP++P  F +P     H SH PKI+CSS++ QSQS K++LL LI+ + RGLKTQ
Sbjct: 1   MASCLILPTIPSKFRNPK----HTSHAPKITCSSLTAQSQSGKKELLRLIAGEDRGLKTQ 60

Query: 61  KNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGD 120
           +NP KLASIVK+ID LA LG  +VTT  SLSATWRLLWTTEKEQLFII+KA LFGTRAGD
Sbjct: 61  RNPTKLASIVKAIDALADLGAGAVTTGSSLSATWRLLWTTEKEQLFIIDKASLFGTRAGD 120

Query: 121 VLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFG 180
           VLQVIDVEK+ LNNVITFPPDGVFFVRS+IE+AS QRVNFRFTSAVLRGKNWEIPLPPFG
Sbjct: 121 VLQVIDVEKRRLNNVITFPPDGVFFVRSDIEIASKQRVNFRFTSAVLRGKNWEIPLPPFG 180

Query: 181 QGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           QGWFDTVYLDDEIRVVKDIRGDYL+V+RAPY+W E
Sbjct: 181 QGWFDTVYLDDEIRVVKDIRGDYLVVDRAPYAWKE 211

[Close]

BLAST of Cucsa.120630 vs. NCBI nr
Match: gi|502167724|ref|XP_004514232.1| (PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cicer arietinum])

HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84
Identity = 161/210 (76.67%), Postives = 180/210 (85.71%), Query Frame = 1


Query: 4   SLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKRQLLTLISDQQRGLKTQKNPQK 63
           SL LP +PF +P  + TH    PK + SS++ QSQSAK  LLTLISDQ RGLKTQ +P +
Sbjct: 6   SLFLP-MPFNTPKRLPTHCYTHPKFTSSSVTAQSQSAKDHLLTLISDQDRGLKTQNDPTR 65

Query: 64  LASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVI 123
            ASIV +ID +A++G  SVTT D+LSATWRLLWTTEKEQLFIIEKA +FGTRAGDVLQVI
Sbjct: 66  RASIVAAIDAMAAIGSGSVTTGDTLSATWRLLWTTEKEQLFIIEKAPVFGTRAGDVLQVI 125

Query: 124 DVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFD 183
           DV K SLNNVITFPPDGVFFVRSNIEV+S QRVNFRFTSAVLRGKNWEIPLPPFGQGWFD
Sbjct: 126 DVRKLSLNNVITFPPDGVFFVRSNIEVSSQQRVNFRFTSAVLRGKNWEIPLPPFGQGWFD 185

Query: 184 TVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           TVYLDD++RVVKDIRGDYL+V+RA YSW E
Sbjct: 186 TVYLDDDLRVVKDIRGDYLVVDRASYSWKE 214

[Close]

BLAST of Cucsa.120630 vs. NCBI nr
Match: gi|823125162|ref|XP_012483102.1| (PREDICTED: probable plastid-lipid-associated protein 11 [Gossypium raimondii])

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 160/217 (73.73%), Postives = 184/217 (84.79%), Query Frame = 1


Query: 5   LSLPSLPFISPSSITTHLSHLP--------KISCSSISIQSQSAKRQLLTLISDQQRGLK 64
           +SL +L   SP +++T     P        KI+CSS++ QSQSAK+ LL LISDQ+RGLK
Sbjct: 1   MSLAALTLSSPLTVSTTTKQKPRPPHNPKPKITCSSLTTQSQSAKQHLLNLISDQERGLK 60

Query: 65  TQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRA 124
           TQ +  K  SI+KSID +A LGRN+VTT DSLSATWRLLWTTEKEQLFIIEKA+LFGT+A
Sbjct: 61  TQNDTNKRDSIIKSIDAMAVLGRNTVTTGDSLSATWRLLWTTEKEQLFIIEKAYLFGTQA 120

Query: 125 GDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPP 184
           GDVLQVIDV+ K+LNNVITFPPDGVFFVRS+IE+ASSQRVNF+FTSAVLRGKNWE PLPP
Sbjct: 121 GDVLQVIDVDNKTLNNVITFPPDGVFFVRSSIEIASSQRVNFKFTSAVLRGKNWEFPLPP 180

Query: 185 FGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           FGQGWF+TVYLDDEIRVVKDIR DYL+VERAPY+W E
Sbjct: 181 FGQGWFETVYLDDEIRVVKDIRDDYLVVERAPYNWKE 217

The following BLAST results are available for this feature:

BLAST of Cucsa.120630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PAP11_ARATH	2.7e-77	73.80	Probable plastid-lipid-associated protein 11 OS=Arabidopsis thaliana GN=PAP11 PE...	[more]

BLAST of Cucsa.120630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV9_CUCSA	9.5e-114	98.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108600 PE=4 SV=1	[more]
W9QQ39_9ROSA	4.0e-88	77.21	Putative plastid-lipid-associated protein 11 OS=Morus notabilis GN=L484_021783 P...	[more]
A0A0D2PR91_GOSRA	1.6e-84	73.73	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G175700 PE=4 SV=1	[more]
A0A067H1B9_CITSI	4.6e-84	75.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027529mg PE=4 SV=1	[more]
A0A061E254_THECC	1.3e-83	74.41	Plastid-lipid associated protein PAP / fibrillin family protein isoform 1 OS=The...	[more]

BLAST of Cucsa.120630 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00030.1	1.5e-78	73.80	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

BLAST of Cucsa.120630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445459\|ref\|XP_004140490.1\|	1.4e-113	98.59	PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis sativus]	[more]
gi\|659116544\|ref\|XP_008458126.1\|	8.9e-113	98.12	PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis melo]	[more]
gi\|703072316\|ref\|XP_010089253.1\|	5.8e-88	77.21	putative plastid-lipid-associated protein 11 [Morus notabilis]	[more]
gi\|502167724\|ref\|XP_004514232.1\|	1.3e-84	76.67	PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cicer arieti...	[more]
gi\|823125162\|ref\|XP_012483102.1\|	2.3e-84	73.73	PREDICTED: probable plastid-lipid-associated protein 11 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006843	PAP/fibrillin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.120630.1	Cucsa.120630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 39..204 score: 2.3
None	No IPR available	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 1..213 score: 1.6
None	No IPR available	PANTHER	PTHR31906:SF3	SUBFAMILY NOT NAMED	coord: 1..213 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.120630	Cla006670	Watermelon (97103) v1	cgywmB190
Cucsa.120630	Csa6G108600	Cucumber (Chinese Long) v2	cgycuB155
Cucsa.120630	MELO3C021141	Melon (DHL92) v3.5.1	cgymeB176
Cucsa.120630	ClCG06G003000	Watermelon (Charleston Gray)	cgywcgB188
Cucsa.120630	CSPI06G08750	Wild cucumber (PI 183967)	cgycpiB156
Cucsa.120630	CmaCh17G004870	Cucurbita maxima (Rimu)	cgycmaB0295
Cucsa.120630	CmoCh17G004590	Cucurbita moschata (Rifu)	cgycmoB0292
Cucsa.120630	Lsi09G016310	Bottle gourd (USVL1VR-Ls)	cgylsiB169
Cucsa.120630	Cp4.1LG12g04190	Cucurbita pepo (Zucchini)	cgycpeB0286
Cucsa.120630	MELO3C021141.2	Melon (DHL92) v3.6.1	cgymedB174
Cucsa.120630	CsaV3_6G009120	Cucumber (Chinese Long) v3	cgycucB159
Cucsa.120630	Cla97C06G112390	Watermelon (97103) v2	cgywmbB183
Cucsa.120630	Bhi12G001914	Wax gourd	cgywgoB205
Cucsa.120630	Carg26712	Silver-seed gourd	carcgyB0636

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.120630	Cucurbita pepo (Zucchini)	cgycpeB0295
Cucsa.120630	Silver-seed gourd	carcgyB0677
Cucsa.120630	Cucurbita maxima (Rimu)	cgycmaB0313
Cucsa.120630	Cucurbita moschata (Rifu)	cgycmoB0310