CsaV3_6G009120 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G009120
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Plastid-lipid associated protein PAP / fibrillin family protein
Location	chr6 : 7344666 .. 7348449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATTGCAAACTTAATTTAATTATTACGAGGGTTCATACTTACATCATTGTTCTTTTAGCATTACGCTAACATTTTAGTTTCAATGAGAAGTTGTTGAAAAATACTAATGGGTCTCCAAGAGTAACAAAGGCAATCAGATTGATCGTCCTGGAACCAATGAAATGGAGCCCAATCTTGTCTTAGTCATCTCAAATATGATCCCCGACCTTTCAATTCCAAAGCTTCGAATAATGTCAGGTTAACAAAACTCCCAGCCATGGAAATTGCATCTGTTCCTTCTTTGCTTTGCTTCTACAATCTCACCCATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTTCCCTTCTTCCATTACAAGCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTTTTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGGTATCTTGTCTCTGCCCCTGTCTCTTGTTTGGTTGAATTGCTGTTTGAGTTTAATGGGTGTCTCTTGAAATCAGAAAATTAGTAATTTTGTATATAATAATGATTCTAGAGGCTACTTAGTATGCAATCTCAGATATGTGGGAGAACTTAGCTCTAGTTTCAGAGGTCTCATAGAGGATTGATTAATTTTGAGTGTGGTGGATGGAATGAAATGGGTTTGTCATGGGGTTTAATTTTAAGCTCATGTTCAGATGGAGCTTTTGGACCAGTTTCTAATTCCAAACTCATTCATTTTCCGTAGTTTTCAACTCAACTCTCCTTTCCACCATTTTCATGCTTTCCTTAACCATATCTTATAAAACATAGAGACCTATTATTTGTCACTCTGCTTATTTTTGTTATCTATTAAATTCATGTGCAACTATTTATTCCAAAAAACTCTTTAATTTATGGTTGAACTGCTCGATTAAGTTTACGTGCAACTATTGCAAAGCATCTAGATATTGAAATTCTACGTACTTTATGTTTATTATTGTTTTGTAGATAATGATGTTGAGTTTGAATCTCACTGTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTGAGTAATTATCTTTATGATTATGATCTCGTGGGTTGTATTATTTGTGTGCCTCAAATGCATGGTTTCATTTTACTATTTGCAGCTTTCAGTTTAAGACCAAAACATGCTTTAAACCAAATATTAAAATTTCGAGAACAACGTTATATTTCAAATTGACATTCAAAAGCTCCCTAAATCCATAGTGGCTACCTGGAGAGGCAATAAGACAATTAACTAATTAATTCTCAAATACTAGTTAATATAAATTAACAACCAAGCTACTATTAACTAAATTATACATATAATTTTGTAATTCTTCTCATCGACATATCTATAGTATAGTATGATATTGCCATACTTTGGACATAATATCTCTCATAACTTCGCTTTTGATTTCATTCAAGAAGAAGCCTCATATTTTGGGGATGGTTGTCCTAAATTCTAATTTATGTACTCGTAATGTTTCCCTTATCTAGCTAACATTAGACTTAAATCACAGTGTCAACAGGAATAGGATGAAAGAAGAAGAGGGAGCTAGGTGGGAATTTAACCCAATCATGGATATTGAGAATAATGTTGATTGATATAGGATTTAAGATGTATTGTTGAGCATAAGTCTACACGATCATCTGAAACAAGTTTGGTTCTTTGAGAGAAATCTCGATTTTAAAGTTATATTAGTTATGAGTAAGAAAGGCAATTGTTTAATAGTTATGGGCACGTGTAAGGATTTGATAGAATCCCAAACACAGGAGAAGTGGAGAAAATACCAATGGCCTATCAACAAACTTTCTAGATGCCTCTCTCTCTCTGAATCTCACAATAAACAATCCCACCCAAAATGATCCTCTCCCTCCAAAACCTTAACTCTATTTTTTACCAAGTCACTCCTAGCAAATTACCAGTTTCCACTATGCCCTTGCTAATTATATAACCAAGTCATGACATGGTGTAATTTATATAAATCCGAGTTTAAAATTAGATGATTCAAAGAAAGAACTCCTTTTAAGCATATGATCTACAGCAGCAATGGCTCTGTATCTAAGAAACGCATTCGCTGGAATAAATCCACACAAAAATTTTATAGACTGATACGTGCTTCACAACAATGTAACATATTAAGCGTATGAGAAGAAATACGCACCAGACCCCTAAGTAATGACTGATAACTTCAAAGGTACTAACTTTCCCATAAGTTAAAAATAAGTTCTTGATTGAGATCCACCTACTATACCCTTCCATGAGATCCAAAGGAGTGTGTTTATCACTAGACCAATTCTCAATAAGAAAATGGAAATCACCATAGAGCTTCAGTTTTCTTTGGTATATCTAAAACTGTTGGGGAGTTACCATCTTCAAGTTTGAGTAAAGCATTATCTGCCATGTAAGGGTTAAGATAAACTGAGATCTTATAATGATCTTCCAAAGCATCTTTAATTTCTTTACAGTTATAAATTATGATCGAACATCACTACATTCTGGCCACATCCCTGCAAAATCAGAATCCGTATAGACGAACAATTTAAGTAATTTTGAAGCAAAAGGGGACCATACAGAGAAGATTTTTTTTTTACTCCATTTATCTATGTTCACATCTCCAGCAACTTGTGGTTTGGACATTGATTCCTATATCTAAACTCGAACAAGGACTATTTCTAGATCATAAAGATCCAACTTGGGCTGCAGTTTTGGAGACATTTTTGTAATTATCTTGTAGGTAGTATCTTACATAGTTAGAAAATCTTTCTTTAAAGGGGTTTCACACAATCTTTTTTTTTTTTTTTTTATGCTTTAATATTTTTTCTCAACTAAAGCAACCTTTTCTATTAAACTTGAAAGGCCTTGTCATGTTCTGCGTTTCTCGTGTTCTTTTTTTGAACTATTTTGTTAGTAATTCAATCATGAACATAAATTGTGGCATTTTCTTTTATTTTCTGTAGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGAAGGCTGAATCACAAGTTTTCAATGGTGCTGTACAAACATGATGTAGTTGATTATAGTTGTGTTACTCATCTAATTTTTCTCCCAAGTAGATTTATCCTTATGGTATCTGTATTCATATCATGCAAGACATGCAACAACTTCTCTCACTCTGTATATATTTAATCTTACAAGTCTTTCCACTTATAATTTATTTATATTTTTTATTTTCTGTTATCTACTTTTTGGAGTGTGTTATCAAAATTCAAACTAGAGTGTTTGAAAACTATACCTATGTAATTTTTGTTTGTTTTGAGGTTGATAGTGCACTTTTTTATATGAAAATAAGTAAGCTATTTGGCT

mRNA sequence

ATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTTCCCTTCTTCCATTACAAGCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTTTTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGA

Coding sequence (CDS)

ATGGCCAAATCCCTCTCCCTTCCATCTCTCCCCTTCATTTTCCCTTCTTCCATTACAAGCCATCTCTCACACCTCCCCAAAATCTCTTGCTCTTCCATTTCTTTTCAATCTCAATCAGCCAAACGCCAGCTTCTCACTCTCATTTCTGACCAACAAAGAGGTCTCAAGACCCAGAAAAATCCTCAGAAACTTGCTTCAATTGTGAAATCAATCGACCACTTGGCTTCTCTTGGCCGTAATTCTGTCACTACCGACGATTCACTTTCTGCGACATGGCGTCTTCTGTGGACTACTGAGAAAGAGCAGCTGTTCATCATTGAGAAGGCTCACTTGTTTGGTACTCGAGCTGGGGACGTTTTGCAGGTCATTGATGTTGAGAAAAAGAGTCTCAATAATGTTATCACTTTTCCTCCAGATGGGGTTTTCTTTGTTCGGTCAAACATTGAAGTTGCTTCCTCTCAGAGAGTGAACTTTAGATTTACAAGTGCTGTTCTGCGAGGGAAAAACTGGGAGATTCCATTGCCACCATTTGGACAGGGTTGGTTTGACACAGTATACCTCGATGACGAGATTCGGGTTGTAAAAGATATCCGAGGTGATTATTTGATTGTTGAACGTGCTCCTTACAGTTGGACAGAATGA

Protein sequence

MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE

Homology

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BLAST of CsaV3_6G009120 vs. NCBI nr
Match: XP_004140490.1 (PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis sativus] >KGN46562.1 hypothetical protein Csa_6G108600 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 3.7e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

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BLAST of CsaV3_6G009120 vs. NCBI nr
Match: XP_008458126.1 (PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo])

HSP 1 Score: 409.1 bits (1050), Expect = 9.5e-111
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLSHLPKISCSSIS QSQSAK QLLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

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BLAST of CsaV3_6G009120 vs. NCBI nr
Match: XP_022158528.1 (probable plastid-lipid-associated protein 11 isoform X1 [Momordica charantia])

HSP 1 Score: 371.7 bits (953), Expect = 1.7e-99
Identity = 185/213 (86.85%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKS SLPSLPF  P SIT   SHLPKISCSS S QSQSAKR+LLTLISDQ+RGLKTQ+N
Sbjct: 1   MAKSFSLPSLPFNSPHSIT---SHLPKISCSSTSIQSQSAKRELLTLISDQERGLKTQRN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLA IVKS+D LASL RNSVTTDDSLSATWRLLWTTEKEQLFI+EKAHLFGT+AGDVL
Sbjct: 61  PQKLALIVKSVDALASLARNSVTTDDSLSATWRLLWTTEKEQLFIVEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEK+SLNNVITFPPDGVFFVRS IE+ASSQRV+FRFTSA+LRGKNWE+PLPPFGQG
Sbjct: 121 QVIDVEKRSLNNVITFPPDGVFFVRSTIEIASSQRVDFRFTSAILRGKNWEVPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WF++VYLDDEIRVVKDIRGDYLIVERAPY+W E
Sbjct: 181 WFESVYLDDEIRVVKDIRGDYLIVERAPYTWKE 210

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BLAST of CsaV3_6G009120 vs. NCBI nr
Match: XP_023547719.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 1.7e-99
Identity = 190/214 (88.79%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFP-SSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQK 60
           MAKSLSLPS PF  P SSI +HLS LPKISCSSIS QSQS + QLL LISDQ+RGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTHLSQLPKISCSSISIQSQSPRDQLLALISDQERGLKTQK 60

Query: 61  NPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDV 120
           +PQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDV
Sbjct: 61  SPQKLASIVKSIDALASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           GWF+TVYLD++IRVVKDIR DYLIVERAPY+W E
Sbjct: 181 GWFETVYLDEDIRVVKDIRDDYLIVERAPYTWKE 214

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BLAST of CsaV3_6G009120 vs. NCBI nr
Match: XP_022959112.1 (probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98
Identity = 190/214 (88.79%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFP-SSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQK 60
           MAKSLSLPS PF  P SSI + LS LPKISCSSIS QSQS K QLL LISDQ+RGLKTQK
Sbjct: 1   MAKSLSLPSRPFNSPSSSIGTRLSQLPKISCSSISIQSQSPKDQLLALISDQERGLKTQK 60

Query: 61  NPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDV 120
           +PQKLASIVKSID LASL RNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDV
Sbjct: 61  SPQKLASIVKSIDALASLARNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDV 120

Query: 121 LQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180
           LQVIDV+KKSLNNVITFPPDGVFFVRS+IEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ
Sbjct: 121 LQVIDVKKKSLNNVITFPPDGVFFVRSSIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQ 180

Query: 181 GWFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           GWF+TVYLDD+IRVVKDIR DYLIVERAPY+W E
Sbjct: 181 GWFETVYLDDDIRVVKDIRDDYLIVERAPYTWKE 214

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BLAST of CsaV3_6G009120 vs. TAIR10
Match: AT4G00030.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 291.6 bits (745), Expect = 4.0e-79
Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 27  KISCSSISFQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDD 86
           + SCS  +  +Q AKR+LL LIS++ RGL+TQK+P+K   IV +I+ +  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVER 206
           +I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGDYLIV+R
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDR 202

Query: 207 APYSWTE 214
           APY+WTE
Sbjct: 203 APYNWTE 209

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BLAST of CsaV3_6G009120 vs. Swiss-Prot
Match: sp|O81304|PAP11_ARATH (Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP11 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.2e-78
Identity = 138/187 (73.80%), Postives = 163/187 (87.17%), Query Frame = 0


Query: 27  KISCSSISFQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDD 86
           + SCS  +  +Q AKR+LL LIS++ RGL+TQK+P+K   IV +I+ +  +GR+S+TTDD
Sbjct: 23  RTSCSIFANPAQRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDD 82

Query: 87  SLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRS 146
           SLSATWRLLWTTEKEQLFIIEKA LFGT AGDVLQVIDV K+ LNNVITFPPDGVFFVRS
Sbjct: 83  SLSATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRS 142

Query: 147 NIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVER 206
           +I++AS QRVNFRF SAVLRGKNWE+PLPPFG+GWF+ VY+D EIRV KDIRGDYLIV+R
Sbjct: 143 DIDIASPQRVNFRFNSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDR 202

Query: 207 APYSWTE 214
           APY+WTE
Sbjct: 203 APYNWTE 209

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BLAST of CsaV3_6G009120 vs. TrEMBL
Match: tr|A0A0A0KDV9|A0A0A0KDV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108600 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 2.5e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN
Sbjct: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL
Sbjct: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

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BLAST of CsaV3_6G009120 vs. TrEMBL
Match: tr|A0A1S3C7Q5|A0A1S3C7Q5_CUCME (probable plastid-lipid-associated protein 11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497655 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 6.3e-111
Identity = 206/213 (96.71%), Postives = 209/213 (98.12%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLSHLPKISCSSIS QSQSAK QLLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 213

[Close]

BLAST of CsaV3_6G009120 vs. TrEMBL
Match: tr|A0A1S4E2N2|A0A1S4E2N2_CUCME (probable plastid-lipid-associated protein 11 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497655 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 5.2e-89
Identity = 173/180 (96.11%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MAKSLSLPSLPFI PSSIT+HLSHLPKISCSSIS QSQSAK QLLTLISDQ+RGLKTQKN
Sbjct: 1   MAKSLSLPSLPFISPSSITTHLSHLPKISCSSISIQSQSAKHQLLTLISDQERGLKTQKN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           PQKLASIVKSID LASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGT+AGDVL
Sbjct: 61  PQKLASIVKSIDDLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTQAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

[Close]

BLAST of CsaV3_6G009120 vs. TrEMBL
Match: tr|W9QQ39|W9QQ39_9ROSA (Putative plastid-lipid-associated protein 11 OS=Morus notabilis OX=981085 GN=L484_021783 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 4.4e-88
Identity = 165/213 (77.46%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 1   MAKSLSLPSLPFIFPSSITSHLSHLPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKN 60
           MA  L LP++P  F +    H SH PKI+CSS++ QSQS K++LL LI+ + RGLKTQ+N
Sbjct: 1   MASCLILPTIPSKFRN--PKHTSHAPKITCSSLTAQSQSGKKELLRLIAGEDRGLKTQRN 60

Query: 61  PQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVL 120
           P KLASIVK+ID LA LG  +VTT  SLSATWRLLWTTEKEQLFII+KA LFGTRAGDVL
Sbjct: 61  PTKLASIVKAIDALADLGAGAVTTGSSLSATWRLLWTTEKEQLFIIDKASLFGTRAGDVL 120

Query: 121 QVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQG 180
           QVIDVEK+ LNNVITFPPDGVFFVRS+IE+AS QRVNFRFTSAVLRGKNWEIPLPPFGQG
Sbjct: 121 QVIDVEKRRLNNVITFPPDGVFFVRSDIEIASKQRVNFRFTSAVLRGKNWEIPLPPFGQG 180

Query: 181 WFDTVYLDDEIRVVKDIRGDYLIVERAPYSWTE 214
           WFDTVYLDDEIRVVKDIRGDYL+V+RAPY+W E
Sbjct: 181 WFDTVYLDDEIRVVKDIRGDYLVVDRAPYAWKE 211

[Close]

BLAST of CsaV3_6G009120 vs. TrEMBL
Match: tr|A0A1R3HGM4|A0A1R3HGM4_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_19449 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-86
Identity = 164/205 (80.00%), Postives = 184/205 (89.76%), Query Frame = 0


Query: 11  PFIFPSSITSHLSH--LPKISCSSISFQSQSAKRQLLTLISDQQRGLKTQKNPQKLASIV 70
           P + PS   S LSH  LPKI+CSSI+ Q QSAK+ LL LISDQ+RGLKTQK+P+K  +IV
Sbjct: 22  PQLNPSPNLSELSHIRLPKIACSSITTQPQSAKQDLLNLISDQERGLKTQKDPKKRDAIV 81

Query: 71  KSIDHLASLGRNSVTTDDSLSATWRLLWTTEKEQLFIIEKAHLFGTRAGDVLQVIDVEKK 130
           K+I  +A   R++VTTDDSLSATWRLLWTTEKEQLFIIEKA+LFGT+AGDVLQVIDVEKK
Sbjct: 82  KAIVAMAVFSRDTVTTDDSLSATWRLLWTTEKEQLFIIEKAYLFGTQAGDVLQVIDVEKK 141

Query: 131 SLNNVITFPPDGVFFVRSNIEVASSQRVNFRFTSAVLRGKNWEIPLPPFGQGWFDTVYLD 190
           +LNNVITFPPDGVFFVRS+IEVASSQRVNF+FTSAVLRGKNWEIPLPPFGQGWF+TVYLD
Sbjct: 142 TLNNVITFPPDGVFFVRSSIEVASSQRVNFKFTSAVLRGKNWEIPLPPFGQGWFETVYLD 201

Query: 191 DEIRVVKDIRGDYLIVERAPYSWTE 214
           DEIRVVKDIR DYL+VERAPY+W E
Sbjct: 202 DEIRVVKDIRDDYLVVERAPYNWKE 226

The following BLAST results are available for this feature:

BLAST of CsaV3_6G009120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140490.1	3.7e-115	100.00	PREDICTED: probable plastid-lipid-associated protein 11 [Cucumis sativus] >KGN46...	[more]
XP_008458126.1	9.5e-111	96.71	PREDICTED: probable plastid-lipid-associated protein 11 isoform X1 [Cucumis melo...	[more]
XP_022158528.1	1.7e-99	86.85	probable plastid-lipid-associated protein 11 isoform X1 [Momordica charantia]	[more]
XP_023547719.1	1.7e-99	88.79	probable plastid-lipid-associated protein 11, chloroplastic isoform X2 [Cucurbit...	[more]
XP_022959112.1	1.1e-98	88.79	probable plastid-lipid-associated protein 11, chloroplastic isoform X1 [Cucurbit...	[more]

BLAST of CsaV3_6G009120 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00030.1	4.0e-79	73.80	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

BLAST of CsaV3_6G009120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81304\|PAP11_ARATH	7.2e-78	73.80	Probable plastid-lipid-associated protein 11, chloroplastic OS=Arabidopsis thali...	[more]

BLAST of CsaV3_6G009120 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDV9\|A0A0A0KDV9_CUCSA	2.5e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G108600 PE=4 SV=1	[more]
tr\|A0A1S3C7Q5\|A0A1S3C7Q5_CUCME	6.3e-111	96.71	probable plastid-lipid-associated protein 11 isoform X1 OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S4E2N2\|A0A1S4E2N2_CUCME	5.2e-89	96.11	probable plastid-lipid-associated protein 11 isoform X2 OS=Cucumis melo OX=3656 ...	[more]
tr\|W9QQ39\|W9QQ39_9ROSA	4.4e-88	77.46	Putative plastid-lipid-associated protein 11 OS=Morus notabilis OX=981085 GN=L48...	[more]
tr\|A0A1R3HGM4\|A0A1R3HGM4_COCAP	4.1e-86	80.00	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_19449 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006843	PAP/fibrillin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G009120.1	CsaV3_6G009120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 39..204 e-value: 2.3E-37 score: 128.8
None	No IPR available	PANTHER	PTHR31906:SF3	PLASTID-LIPID-ASSOCIATED PROTEIN 11-RELATED	coord: 23..210
None	No IPR available	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 23..210

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G009120	CSPI06G08750	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G009120	Cucsa.120630	Cucumber (Gy14) v1	cgycucB159
CsaV3_6G009120	CmaCh17G004870	Cucurbita maxima (Rimu)	cmacucB0451
CsaV3_6G009120	CmoCh17G004590	Cucurbita moschata (Rifu)	cmocucB0444
CsaV3_6G009120	Cp4.1LG12g04190	Cucurbita pepo (Zucchini)	cpecucB0176
CsaV3_6G009120	CsGy6G008850	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G009120	Carg26712	Silver-seed gourd	carcucB0595
CsaV3_6G009120	Cla006670	Watermelon (97103) v1	cucwmB570
CsaV3_6G009120	MELO3C021141	Melon (DHL92) v3.5.1	cucmeB446
CsaV3_6G009120	ClCG06G003000	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G009120	Lsi09G016310	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G009120	MELO3C021141.2	Melon (DHL92) v3.6.1	cucmedB438
CsaV3_6G009120	Cla97C06G112390	Watermelon (97103) v2	cucwmbB487
CsaV3_6G009120	Bhi12G001914	Wax gourd	cucwgoB562

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G009120	Silver-seed gourd	carcucB0638
CsaV3_6G009120	Cucurbita maxima (Rimu)	cmacucB1069
CsaV3_6G009120	Cucurbita moschata (Rifu)	cmocucB1052
CsaV3_6G009120	Cucurbita pepo (Zucchini)	cpecucB0410