Cucsa.108720 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGATACGTGTTTCAATAAAAGAAATTTAAAAGTCAATAGAAAAAAaTGGTAAGAGGAACAAAATCGAGGCAAAAAGAAGAAAAAaGAAAAGAGAAAGGAAAACGTGACTGACGAACAGAACAAGAGGAGAAGAAGAAGAAGAAGAGAGATAGAGGGAGTGGGGGCATGGACGCACTGAAGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAATCTGAAGTCACCACCGTCCCTCCTCCACCACCTGCAATGGTAATTCTCTGCTTTTCCCCTTCTGCTGCACTTTCCCTTTTCGAACTATCTGATTTTAGGCTCTCAATTTCATCAACCGATGAACATCATGGGTTCATTCTTTTCATTTCTCTGAGAAATTTGAGTTTGTTTACAAGGGCTGCTAGTATTTGCTGCTTCTTGTGTTTTCAATTTGGTGTTTTGAATGACGGATGCTTTTTATGTGTCTACTGAACGCCCAAGTAGAACTTTTGATTGAGCTTAATCGAATTGAATTGCTTTTTATGTGGGATTTTGTTTTTTGAGCTCCTTTAGGTCTTAGCTCCTCGGATTGGCTACCTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCGGTAGCACGCTTCCTCCTGGAGTTGACACCATCTGGTTTGAGTACCAGGGTTTGCCCCTTAAATG ATGGAGGAGATACGTagagatagagggagTGGGGGCATGGACGCACTGAAGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAATCTGAAGTCACCACCGTCCCTCCTCCACCACCTGCAATGGTCTTAGCTCCTCGGATTGGCTACCTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCGGTAGCACGCTTCCTCCTGGAGTTGACACCATCTGGTTTGAGTACCAGGGTTTGCCCCTTAAATG ATGGAGGAGATACGTAGAGATAGAGGGAGTGGGGGCATGGACGCACTGAAGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAATCTGAAGTCACCACCGTCCCTCCTCCACCACCTGCAATGGTCTTAGCTCCTCGGATTGGCTACCTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCGGTAGCACGCTTCCTCCTGGAGTTGACACCATCTGGTTTGAGTACCAGGGTTTGCCCCTTAAATG MEEIRRDRGSGGMDALKYIWEGAIPLQIHLHESEVTTVPPPPPAMVLAPRIGYLPLLASQIKPYFGSTLPPGVDTIWFEYQGLPLKX
BLAST of Cucsa.108720 vs. Swiss-Prot
Match: ATG5_ORYSJ (Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of Cucsa.108720 vs. Swiss-Prot
Match: ATG5_ORYSI (Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 1
BLAST of Cucsa.108720 vs. Swiss-Prot
Match: ATG5_ARATH (Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of Cucsa.108720 vs. Swiss-Prot
Match: ATG5_DICDI (Autophagy protein 5 OS=Dictyostelium discoideum GN=atg5 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.6e-10 Identity = 30/73 (41.10%), Postives = 44/73 (60.27%), Query Frame = 1
BLAST of Cucsa.108720 vs. Swiss-Prot
Match: ATG5_EMENI (Autophagy protein 5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=atg5 PE=3 SV=2) HSP 1 Score: 57.0 bits (136), Expect = 1.2e-07 Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 1
BLAST of Cucsa.108720 vs. TrEMBL
Match: A0A0A0LA41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G197920 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 2.5e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.108720 vs. TrEMBL
Match: A0A067E9E3_CITSI (Autophagy protein 5 (Fragment) OS=Citrus sinensis GN=CISIN_1g035508mg PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1
BLAST of Cucsa.108720 vs. TrEMBL
Match: V4U4U7_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1
BLAST of Cucsa.108720 vs. TrEMBL
Match: V4S1S6_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1
BLAST of Cucsa.108720 vs. TrEMBL
Match: V4RJI1_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 1
BLAST of Cucsa.108720 vs. TAIR10
Match: AT5G17290.1 (AT5G17290.1 autophagy protein Apg5 family) HSP 1 Score: 120.2 bits (300), Expect = 6.5e-28 Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of Cucsa.108720 vs. NCBI nr
Match: gi|449446111|ref|XP_004140815.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.108720 vs. NCBI nr
Match: gi|778679952|ref|XP_011651221.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis sativus]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.108720 vs. NCBI nr
Match: gi|700202344|gb|KGN57477.1| (hypothetical protein Csa_3G197920 [Cucumis sativus]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.108720 vs. NCBI nr
Match: gi|659112388|ref|XP_008456194.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
BLAST of Cucsa.108720 vs. NCBI nr
Match: gi|659112386|ref|XP_008456193.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo]) HSP 1 Score: 159.1 bits (401), Expect = 3.6e-36 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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