Carg24250 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24250
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Autophagy protein 5
Location	Cucurbita_argyrosperma_scaffold_191 : 242336 .. 252474 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGAAGAAGAAGAAGAAGAAGCAGAAGGGAGGGAGAGAGAGAGAGACAGAGAGAGGGGGCATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTATTTCTCTGTTTCCTCCCTTCGCTGCTGCACTTTCCCTTTTCTAACTATCAAATTTCCGGCTCTCAATTTGATCAACAGATGAATATCATGGCCTCATTCTGTTTATTTATCTCTTTTCCTCTGGGAAATTTGACTTTTTTTTTCTTTACAAGGGTTGTTTGTATTTCCTGCTTCTTTGTGTTTTTCAATCTGAAGTTTTGAATAAGGGATGATTTTACGTGTCTACTGTACCCCAAGTACATCGATCTTTGATTGAACTGAATCGAATTGCTTTCCATGTGGAATTTGTATTTTGATCTACTTTAGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGTACGCTCTTCTTTTCTCTTTTAAATTTCATCTTTGTTAATGGTTTCTTCGAATTTTGTAGATCAGTTTGAGTTTTCTTTAATAATCTACTACTATTCTCTGTTTTTGTTACTACGACACCGCTCTTCTCCGTCATTCTATGTCTCTTGGGGTTGTACTTCTGGCTGTCTTGTATAACTGTTCTTGCTATTTTTTCGCTTTTGATAAAACTCTTTCTTTCTCTTATTGCGTATGTCTCACAAGGTACACGGAGAGGAAAGCTGAAAATTGAAACGTGTTAAATTAATAATATGTACTATGTTTTAGTAGGAAGGACTTCCGTTTATTATTGAAGACTATAGAAAGAAGAAATAGGATAAGATATTCATCTCAACCTAGTGATTTAGAATGGAAGAAGATGATAGACATTCATGATAAAGGAAAATGGTTGAAGGGAAACAATTTCATAGGTAAAGCAAAAGAAATGAGAGGGAAGGAGAGCCTTCACCAAGACTAAGGTGTGTTATATCTGTTAAAGCATGATTACTAAAAGTTTTGTTAAGTCTACACCATCAAGTTGCTGTCTAAAGGACGTGATCCCCAAGAAAGGGGGAAGTTTTCCCCAAACACCAAGACTAAGGTGTGTTATATCCATTAGAAACTTGTGATGAAACTGATCCATAGAAAGTTAACCTATTCCTTGGAGGGACAGTTTTGTAGGAGGGAGTGAGGCTTAACATGACTATAGTTCAATTGGTTAAGGTATATGCCCTCGGCCAAGAGGTTAGCTCCGTCCTGCGTTTTGTTGAACTACGAAGGAGGGAGTGAGATTGAAACTAATGTCTTTATCACATGGATGATAGCAAAAGTAGGTTGTAATAGGATTCCACATGGTGGTGACGAATTGGCAATGAACAAAAATGTGGTATTACTGTTTTGAGGTCCTTTTGCAAAGACCAAACCAATTAGGGGAGAGAGCTGGATGCAGATTCCTCCTCTGAATTTTGTCATGGTGTTGCTGTTGTTTAGACTTCAGAGCAATTTCCTTAATGAAGATCACCAAATTGCCTTGCAAAAATTAGAATTGAATAATTTCCTATCGATGTTAGGCCTTTGGGAAGAGACTTGCACGTTGAATATCCTGAAAGGTAAAAATTTCAAGACCATTAATCTGGGGAATTGGAGGAGGATCAACCTTAAATATGTCACGAAGGAGAGAGTCCATCTGCAAAGTCCTTGCCATTAGAATTTCTTGTGAGCAAATTCCAAATCAAAAGTTCATTGACTAAATTTGGGCAACTATCGTATTTGAATCGACACAAGGGGCATAAAGTTGTGGGTAGAGGAAGCAAGGGAGGTATTACCTCTCCAAGGGTCTTGATACAACAACACTAAGAGCTTTGGTGTAGGAAACATCCCAACCATGAACCTCAACATTTTCGTATCAATACAAAAAAAAAAAAACCTACGAAAATGTTAGAAACATATTACTTTATGGTTTATGATGAAAAGATTAGAGAATTCATTCTTATCTCAGGTTTCAAACAGTTCACAAGTTTGGTAACCAAACTTGAATGTTTGAAGATATGCAATCTTAACACTAGGCTTGCAAAGGGAACTGACACTCTGTTGTGTCAAGAAAAGTAATCAAATATCGTTCATCATCAATGTCTAAGAAGAACATGACATTCCTTGGGTTTATATAACCAAGGGTGAAAAATATGGAGAATCTAAAGACCCTAGAGCTTGAAAATCCTAAATAATAAAGGGATAATTAAAAAATTATTCTAAAAATGGGAATTGTAAGATAATTGACAATTGATCCATCTAACTTTCATTCCTAAGAATCATACATCCAGTTAAAATTGCAAAAATTGAAAGAAGCAAAATTCTTCGGGAAGGAGGCAAGGTTGGCAACAAGACAATATACATGGGCGTAAGAGTGGTGCACGACAAGCAGCTGGTGGGCGTGCATCTAGGTCATCGTTGATCAACATGGGTGTCGGGCAACATGTCTAGGGCATTAAGGCAGCATGCAAAGACACAAGTTGTTGCAAGGCAGGGTCTAGACAAAGGGCGCATGGCCGTGAGTGCATGCTGGCTTGTGCTGATAGGCCTAGGTGGGCATGGGCTTCCTTTATGGGTGCACAATGATGGGTTGTGTGAGGAAAACACTGATGGGCTATGGAGACCAGGGGTGCATGGGTGGGAGCACTGGGCCATGCAGATAGATTGTTTGACACCAATGGTCCGGGCATGTGGATGAACTTATGGTTGAGTAGTGTAGGGCATCAGGTTTGCTCCCCAGAGGTTTTTTGTGGGCTTTCTTTTGCGATGGCATATTGAGCTTAATAGGTGGTTTCCAACTTTCGAGCCAGCTACTTGCAATCTTGGATCTTCTTGATGTGGTCAAGGCAATGGTCTAAGACCATTGTCAAAAGAATAGGAAACTCAGTATGAGATTAGCTTTTTGGTTTTCCAAAGGACTTTCGAGTGCTTGGTGTCATTCGGTGACTAGTTGCTAGGAGAAGGCCCAAATTTAGCTTTTAATGTTTTTTTTTTTTGAAAGTGAGCATTTTTTTCGTGAGTATAATGGTATGCCAATAGACCGACACTTTTGAATTGACATAAAATAAAAAGGCGAATTAGAGGCGCTAAAGTAAATAAGCTCCCAAGATTTCAGAAAGTATCTTTGAATCTTTCCTCTCCTGAAAATTTATTTATTTATCTCAAGTCAAATCTGTCTAATGGAAAGAAAAAAGAAGGTAGTAATTCTTAATATTTTTTGGCTCCTTTAATTATTATATTTATTGTTTTTAGTGGAGAAATAGAAGTTATAAGATGATTTTATAGATATTTGTTTCAAATGGTCTATAACTGCATAGGGCTGTAACTAGAAGAACAAGAGTGTTTAAGCTGGTAATAGAAAATAATAAATTGAGATTGCGCAAGTGGATTCTTGGCTAATTTCTTTGACTTAATTGTCAGTTTAGTTTGACAACAATATTTCCATAGTCATTTAGTATGTCAGGATTTCGCCTTTTAGAAGATTATAGTTTTACTAATTTATTCAGAATTAACAGTCCTGGCAAAAAATTGTGTTGCTCATGATAGAATCTGGTGCATTCTTCTCAGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTTCAAATTCTATCTCTTTATCTTTATAGTTCAAGCTGCTATATTTTTATTGTATCTGACACCCATTTTCCTTTAAATTTAGTAAAAAATTCATTTATACTCCTAAACTTACTTTGGGTTATATAAATTAAAACTACAAACTAATAATTGAATCAATTTAAATCCTAAACTTTCAAAAGTAAATCAATTCAGACCCTCCATTAGTGGTTTTTAACTTTTTCACTTTATTCTATTTAAAATGAATTCAAAATCACCTAAATAAAAATATTATTCTCTCAAAATCCTACCAAAAGTAATAAGAAAAATTTATCCCATAGTTCTTTTTAAATAGGTATAAAAATTGAGGAAAAAGAAAATATGATAAACTACTCATATTAATGAAAACCACTACCATTCATTTGATTTTAGCATTCTTTCTAATATTTTGTTAATCACTGCATTTAAAGAAGTCTTATGCACATGTGAGAGTTATGTATTAATAGTTCAAAATTTGAATCCTAATGGAGGGTCCAAATTGATCTCCTTACGAAGTTTAGAGTTTTAATTGATACAACCAACAAAGTTTAAAAGTACAATTTTATTTTTCCAAAATTTTAGCAAATCGAAAAGTTCCGACCTCGCGTTGGTTGCACATGAGAATTAATATATATCTGGGTCTTGTTGTGACTGCACTTGCATTCCTCAGTATGAGAACCTTAGGTGCGTTAATGTTGAATTTAGCATTGGTGGTGCATCACTGCTGGTTGAACTTTTTGTAGGAACGGAATTTCAGCTACTTCAAAGTTTCTGTTTAAATTTCTTTTTTCAGATTATAACTCAATTCAAAGTTAAGCATTTCAATAAAGTTTCATGGAATCCAGCATAAGTTTTAGTTCCCGTCCTTAGGAGTATGAATGTATGTGAAGTGAAAAGTCGAAGGTGATTTTTGGTCAGCATCCAAAATAAGTACGTCTGTATATTCACACTGTAATTTTTTTCAATGTTTTTAACCTTCGGAAAAAGGATTAATTAGCAATTCCCATGGTTAATTCACTTCAGTAATGAGTAAGAACTTAGCTCTCTTAGCCTAGTGGTTGTTGCTCTTTCCCTTAAAGACAGATACTTCACCGTACAAATCAAACAGCAATTTCGCATTTTTTATGCTTTGGTTTCCAAATCCCATGGTTCCTACTTCTAGAGTTTCACGTTCCCATTCCCTGATACCAAATGCTCTGTTTTTTCCTAGGAGTGTAAATGCAATATCCATTCTGTAAAACGAATTTGGTTATTTGGTTATGTTAGCTAAAGCTAGAACGGTTTGAAATTAGGTATTGCCTTTACTTTCTCATATTTTGTGTCAAATGTGAAATGATAGCCATCTCTCTCTTTTTAACAGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGTTGGTAATACTTTCTTTAAATCTTGTCAAAATCGTTACAATCTCTTCAAGAAGAATACTACACACATAACTTTGTTCTAAGGCACCAAATGGATGCAGAAAATAATGTCTAATGGACTCCTAAACTTTTAAAACGTTAAATAGGGCCTTAAACTTTCCACCCTGTAAATAATCTTTGAGTTCTTTTTTCTTTCTAACTTCTAATTGACCCAGGAACCTTTTTTTTCTTTTTCTCAAGTACAATATAGGGATAGAGTGGGTCTCAAACCACATTGGGGAGGGGGAAAGCACCAATCAGTGTCAATGAGCTGCCTGTCGGATTATAGCACACCTCTCTATCCCTTTCATCATTAGCCAACTTAGGACATCTGCCACACTAATAAAGAGGAAGGGCAAAGGTGTTGAGTGTTGACTCTGTCTAATTTCCCGGTGGCAAAAATGTCCTCTTGGTCGGCCATTGTTCACATTAGAGAAATTAGTTGACTGAAGGCAATTCCGTTAACACATTTTCCATTTAAAGCCAAAACCCGTTTGGACACATTCTCATACAAAAACACCAAATCATGTGATTATAAGCCTTCTCTCAAAGTGTTATACCTTGATGATTATGCGTTCCTTAATCAGATATTCTTTTGGTGCCTGATTTGCGATCAGAACCCAATACAATATTTGTTTTCCACTCACAAGTATCCCTAGTGAAGTGGAGATGGAACTAGCAAGCACCTTTTTACTAATGACCAGTATAGAATTCTTAATTTTTGCGCCCCCAAACTTTTTTGGAATAAGACAAAAAAATTTATTCATGGTTTCATCTGCTACGCCTCTCTCATTGAAATTTGATTTAAATATGTTGTCTTAATAATGAGAGAAGAACAAAAAAGAGAAAAATGGAAGTCAACCGTCAATAAGGAAAAATAAAAAGATCACAATTTTCACTTGAAACGCTTTATCTTTTTTATTTGTAGTTTTCCTTAATCACTATTTTTTTTTTAAATTTTTTTTATTGATGCTTGTTATTTTTATTGTTTTTCCCCATAAGAGACACATGGCATATCATATTAAAAAAGGAAAGATGCACAAAAACAACAGGGGATAAAGCATCTCCTCCTGAAACCTCAAAAGGAGGACCTAAGAAGGAGCCCAATTCACCAAATTACAATTTCTTGTTTATATTTCTAATTTTTCCTAATTACTATTTTTAATGTTGTTATATTTGATGAGAGACACTTACTGTATCATATCAAAAAATGGGAAGATACAAAAGAAAGAAAAGATGAGTCATCTCTAAAATCTTGAAACAGCGAGTCTATGAAAGGACCCCAATTAAGTCAATAAAACTAGCAGGAGCGACTGACTGGCAAACAAACTCCCAAAGACCATAAAAACATCTGCTAGTCACTTCGAGGATTTTATTATTATTAATTTGCTATCATTGTTATTAATTTGATTGATGTCTTGTTGTGTAATTTTAAGTTGACACTCTTGGTAATTTATGATATTTGGTGAGAGTGATTTTCTACAAGTTGATCAAGGGATGTTCATTATAACCAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTATGCTAGCAAGCCAGAAGTACCTTTGTTTTAGAAATTAAATCAGTAGTTTTTCAAGTGAAATGATGATTCCTTGATGGCATTTTACTTTACTTTCCATAATTTTGCACTTCAATCTAAGTTAATATTGCAATATTATTTTGTGATTTTGAACTTCAATCATTTTGGTGATATAGTTACTTTTGCAGCCTCCAATTAGAGCTCTGTTTTCTAAAAGGAACTGTGTAATATACAGCCGCCTAGGAGCAAGGGATAGAGAAAACCCTACTTGAAACTATAAAAGGGGAGCCTTTTAATTGTTGATAATCATAAAAATGTGTAGTTACATAATAGTTTTTTGTGGTTAGAGCACTACCAAGAAGTAGTGTGTTGTACGTTTCCTTCCTAATCAGCCAAACGACAGCACCATTTTGATGAACTTCTGTAATAATTCCTCTTTCTTTATTTACTCCAATAGTAATATTCTTGGCAAGCTCAATTGGTTAGAAGGGCTCTCCCTCTTTATATGTCTCTTCATCGATTTGTATAAAAAGGTTTCATATTTCTATTGTAAAGGCAGGAACATAAATTATGTGGAAATTTGGAGAAACACTCTCTATATTGAAGAAAAAATACAAAAAAGATAAGGTAGTATAAACCTATATAACTAATACGACTAAGATTCATGAAAAATATAAAGGAAATCCAATGGACTTTATAATGTGTTTTTTCTCTAATTTGTTCGGCTTGATCATTGGCTACTAGCAGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTATGACAACCACTTGTAGGCATTTCAGTTTGAAGCACAATTTATCAAGCAAAAGTTCGATGATAAAGATTGTTTATACTGAATTTTTCCACCAAAAATGTTTTGGGTCGGCAGAGTGTAGAATCAACTCTTGGAATTGAGGTCATGAAAGAGGGTTCTACTCTTCTGGATCTTTATGAACTTTCTATTCATTACCTTTCTGCTTCATGACTGGGGTCTCCTCTTCTAGTTCCTTCCCCTCCCTCCCAATTTTTGTCTTCTTACTGTATATTTTATGAACTTTCTATTCATTACTTTACTTTCTGCTTCATGCCTTGTTGGGTTACATTGAGGTATATCAATATTTTTGTGTACTTGTAGTAATGCCATTCTGTATGTGGGTACTACCTAGGATTAGGGCTCCAAATCATGCGGTTGGATGTACCTTTTGGGGAATGGAGATAAATGTGGAGGGATTTTGAGAGGTTTTGTCTGCATTTACCTTGTAGTTTCTGTTTGGAGATATGAAAGCTGGAAATTAGAGAAAGTTTGGGAGTAAAGAAGAGGAATTTTATAGGTTTGGGACTATATTGCCTTTTGGTTTCTTTGTGCTTCTGCTAAAATATTCTTTGTCCTCTGTATCTAATTTGCATATTGGAGATTTATTCTGTAGACCCTTTACAACTTCTTTCCAATGGCAGTGATCCTTGGGTAGCCACATTTATACCAAATGTAGACAATAATTACAAAACGTAACCATTGTAATCATTCGGTAGACAATAATTACAAGATGTAACCATTATTCTTAATCATTTGTCTCTTCATCTATCCTTTTAAAAGAATTCACCATCAAGTGAAGTTTTTGATGGCATATATTTTCTCTTGGAGAGGGAGAGTTGTTCCAAATTGTTGTTTTGACTTCAAATGTGAGAGGTTTTGGTTCTTGCGCTAAAAGAACCATTGTCAACTAAACCAGACTTTGTGATTCCCATAGAAACGAAATCACGGATGCTGACTAGAAACTTTGTCTAGTCTAGGGCATCTTTAGATGTGGATGTCTCCCCTGATTGTATTCTCGTTCTTTCGAAGGATGTCTTTGTTATGATTATTGAGGTGCTTTAGGTAGGGTTCCTCTTTCCATCCTTGTTTCTATTTCCGATGGATTCTTTTGGCGGTTTATTGGGGTTTATGGGCCATCTTGTGGAAGGAGAAACCTCTTTAAATCAAACTAGTAGTGTTTTATCATTCTACTTTCTGGGTAGTCTCTAGAAGCAAAAGAATGTCTCTATTAATGCTTCTGTATGCCAAGGAAAGCAAGTATTGTGTTGTAAGATATTGGATTTTCATCGAACTTTACATGAGGGTACCGTGTGTGTGTGTGTTTTTTCTTAAGTTTGCACTTACATCTGTTACTCTCTTCCTTCAAGGCTAATATTCATTAACCCCGCTTTATGTTATCGTTTCACTTGTTAGGACAAGTTTCTTATTATTTAAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGGCAACGCTATCTCTTTGTTTTTAGTTTTCTTATTCTTTTGGAAAAGCCTATTTTATGAGTACTGTGTTATTGAGTAGCCAGATTTATGTTGTCCAATCGATCAAAGAATGATAACAGAAAGATAGAAGCTAATTTATGAACAGGGAGGATTGAGTATAGACTGATTGATTTTTCACGATGAATCAATAACTCTTGTCTTGCGCTTTTTTAAAGTTGTCAACTTGAATATAGCTCAATTGATTTAAGGTGTATATCTTCCACAAAAAAGGTCCACAAAATAAATCCCCACCCTCGCATGTTGTTGAACTGAAGCGTCAACTTATATTGTATCGTTATGTAGCAATTTCATTTAGTAGTCAAAGTCTTCGGCATATGCAGAGATTCTCGTCCTCATCTCTATACATTGCAGGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGGTGGATTGTAAAAAAACTGAAGAGAGGGGATCAAATTTTTGTGATGAACATTTTCAATCTTATCATCCAAGCATCAAGCTTGTTAGGATCCAAGGGATTGAACCAAAATGCGAAATTCCTTTCTCCTGGGTGGTGAACAACTTAATGAACCCTGAATACTTTCTTCATATATGTGTTTTTGTAACAGTTCAACAAGTCAGATGCTAAGCTATAG

mRNA sequence

AGAAGAAGAAGAAGAAGAAGAAGCAGAAGGGAGGGAGAGAGAGAGAGACAGAGAGAGGGGGCATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGTTCAACAAGTCAGATGCTAAGCTATAG

Coding sequence (CDS)

ATGGAAGCACTGAGGTACATCTGGGAAGGTGCAATTCCATTACAGATTCATCTCCATGAGTCTGAAGTCACCACCATCCCTCCTCCGCCGCCTGCAATGGTCTTGGCTCCTCGGATTGGCTACTTGCCTCTGTTGGCTTCTCAGATTAAACCTTACTTCAGTAGTACGCTTCCTCCTGGAGTGGACACCATTTGGTTTGAGTACAAGGGTTTGCCCCTTAAATGGCATATACCGACTGGTGTACTGTTTGACCTTCTATGTGCAGAACCAGAAAGACCGTGGAATCTAACGGTACATTTTAGAGGTTATCCAAGACAGCTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTCAACCTGATCTGGTGGTGTTATGGCGTTCTGTATTAAATGGTGACTTGGAAGCCTACCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGACCATGAGCAATTGTTGAAATCTATATCAACTTCATCATTGCCTGGTCAAAGTACTAGTGAGATGGATATAGCAGGAAAAGTAATGACAGGTCGAATTCCAGTTCGATTGTATGTGAGGAATGTAGGTGAAGATTTTGATAATTTAGAAGATGCACCACCAGTTAATAGTTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAATGTAAGTGCTTCACCTTACATGATGCTATTAGGAGTTTGTTATCCGAGCTTTTCCTCGAGAAGGCAACTACCAAGGAGGAATCAACAACTATTATAGGGGAAGAAGAACAAAGTGATTGTACAGAACAGTTCAACAAGTCAGATGCTAAGCTATAG

Protein sequence

MEALRYIWEGAIPLQIHLHESEVTTIPPPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPGVDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFNKSDAKL

Homology

[Close]

BLAST of Carg24250 vs. NCBI nr
Match: XP_022935041.1 (autophagy protein 5 isoform X2 [Cucurbita moschata])

HSP 1 Score: 580.5 bits (1495), Expect = 3.3e-162
Identity = 289/290 (99.66%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 290

[Close]

BLAST of Carg24250 vs. NCBI nr
Match: XP_022935040.1 (autophagy protein 5 isoform X1 [Cucurbita moschata])

HSP 1 Score: 575.9 bits (1483), Expect = 8.1e-161
Identity = 289/291 (99.31%), Postives = 290/291 (99.66%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN GDLEAYLRISSKLKLGGTDHEQL
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNAGDLEAYLRISSKLKLGGTDHEQL 180

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
           LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYIN
Sbjct: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYIN 240

Query: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ
Sbjct: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291

[Close]

BLAST of Carg24250 vs. NCBI nr
Match: XP_022982728.1 (autophagy protein 5 isoform X2 [Cucurbita maxima])

HSP 1 Score: 570.1 bits (1468), Expect = 4.5e-159
Identity = 276/290 (95.17%), Postives = 280/290 (96.55%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTT       MVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPSPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLNGDLEAYLRISSKLKLGGTDHEQ+L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNGDLEAYLRISSKLKLGGTDHEQVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
            SI+TSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 NSITTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKC TLHDAIRSLLSELFLEKATTKEESTTIIGEEE+SDCTEQ
Sbjct: 241 PVEIHEECKCLTLHDAIRSLLSELFLEKATTKEESTTIIGEEERSDCTEQ 290

[Close]

BLAST of Carg24250 vs. NCBI nr
Match: XP_023528056.1 (autophagy protein 5 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 569.7 bits (1467), Expect = 5.8e-159
Identity = 282/290 (97.24%), Postives = 287/290 (98.97%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLNGDLEAYLRISSKLKLGGTDHEQ+L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNGDLEAYLRISSKLKLGGTDHEQVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
            SISTSSLPGQSTSEMDIAGKV+TGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 NSISTSSLPGQSTSEMDIAGKVLTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEEST IIG+EEQSDCTE+
Sbjct: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTNIIGQEEQSDCTEE 290

[Close]

BLAST of Carg24250 vs. NCBI nr
Match: XP_022982727.1 (autophagy protein 5 isoform X1 [Cucurbita maxima])

HSP 1 Score: 565.5 bits (1456), Expect = 1.1e-157
Identity = 276/291 (94.85%), Postives = 280/291 (96.22%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEALRYIWEGAIPLQIHLHESEVTT       MVLAPRIGYLPLLASQIKPYFSSTLPPG
Sbjct: 1   MEALRYIWEGAIPLQIHLHESEVTTIPSPPPAMVLAPRIGYLPLLASQIKPYFSSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEADYIVNGNTKNVMSMSQPDLV LWRSVLN GDLEAYLRISSKLKLGGTDHEQ+
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVELWRSVLNAGDLEAYLRISSKLKLGGTDHEQV 180

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
           L SI+TSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVN+WDDVSYIN
Sbjct: 181 LNSITTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNNWDDVSYIN 240

Query: 241 RPVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIHEECKC TLHDAIRSLLSELFLEKATTKEESTTIIGEEE+SDCTEQ
Sbjct: 241 RPVEIHEECKCLTLHDAIRSLLSELFLEKATTKEESTTIIGEEERSDCTEQ 291

[Close]

BLAST of Carg24250 vs. TAIR10
Match: AT5G17290.1 (autophagy protein Apg5 family)

HSP 1 Score: 382.1 bits (980), Expect = 3.1e-106
Identity = 179/289 (61.94%), Postives = 221/289 (76.47%), Query Frame = 0


Query: 2   EALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA++Y+WEGAIPLQIHLH+S+V +       +VLAPRIGYLPLL   IKPYF  +LPPG 
Sbjct: 4   EAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLPPGE 63

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           D+IWF+YKG PLKW+IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F
Sbjct: 64  DSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNF 123

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA YI+NGN KNVM+MSQ D   LW SV+NGDL+AY R+S KLK+G  + E   K
Sbjct: 124 VNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEFSRK 183

Query: 182 SISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRP 241
           +  +S    Q   E ++AG+V T RIPVRLYVR++ +DF+NLED P +++WDD+SY+NRP
Sbjct: 184 TSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRP 243

Query: 242 VE-IHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTE 290
           VE + EE KCFTL DAI+SLL E   ++A T  E  +I   EE     E
Sbjct: 244 VEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSRE 292

[Close]

BLAST of Carg24250 vs. Swiss-Prot
Match: sp|Q9FFI2|ATG5_ARATH (Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.6e-105
Identity = 179/289 (61.94%), Postives = 221/289 (76.47%), Query Frame = 0


Query: 2   EALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA++Y+WEGAIPLQIHLH+S+V +       +VLAPRIGYLPLL   IKPYF  +LPPG 
Sbjct: 4   EAVKYVWEGAIPLQIHLHKSDVASHPAPPPALVLAPRIGYLPLLIPLIKPYFKDSLPPGE 63

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           D+IWF+YKG PLKW+IPTGVLFDLLCAEPERPWNLT+HFRGYP  +LIPCEGEDS+KW+F
Sbjct: 64  DSIWFDYKGFPLKWYIPTGVLFDLLCAEPERPWNLTIHFRGYPCNILIPCEGEDSVKWNF 123

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA YI+NGN KNVM+MSQ D   LW SV+NGDL+AY R+S KLK+G  + E   K
Sbjct: 124 VNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNGDLDAYTRLSPKLKMGTVEDEFSRK 183

Query: 182 SISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINRP 241
           +  +S    Q   E ++AG+V T RIPVRLYVR++ +DF+NLED P +++WDD+SY+NRP
Sbjct: 184 TSLSSPQSQQVVPETEVAGQVKTARIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRP 243

Query: 242 VE-IHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTE 290
           VE + EE KCFTL DAI+SLL E   ++A T  E  +I   EE     E
Sbjct: 244 VEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSRE 292

[Close]

BLAST of Carg24250 vs. Swiss-Prot
Match: sp|A2X052|ATG5_ORYSI (Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 2.3e-90
Identity = 157/272 (57.72%), Postives = 203/272 (74.63%), Query Frame = 0


Query: 2   EALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA R +W GA+PLQ+HLH+++VTT       + L PRIGYLPLL   IK +FSSTLPPG+
Sbjct: 14  EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           DT+WFEYKGLPLKW+IP GVL+DLLCA+PERPWNLTVHFRGYP ++L PC+GEDS+KWS+
Sbjct: 74  DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTPCDGEDSVKWSY 133

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA +I+ GN+KNVM+MSQ D   LW+SV+ G+L+ Y+ IS++LKLG  + + L++
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193

Query: 182 SISTSSLPGQSTS-EMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 241
              TSS+ GQ  S E +  G     R+PVRLYVR+V ED  +LEDA PV  W+ +SYINR
Sbjct: 194 ---TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINR 253

Query: 242 PVEIHEE--CKCFTLHDAIRSLLSELFLEKAT 271
           P E+  E      TL  A+++LL E F  KA+
Sbjct: 254 PFEVRREEGRSYITLEHALKTLLPEFFSSKAS 282

[Close]

BLAST of Carg24250 vs. Swiss-Prot
Match: sp|Q6ZGL4|ATG5_ORYSJ (Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.3e-89
Identity = 156/272 (57.35%), Postives = 202/272 (74.26%), Query Frame = 0


Query: 2   EALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPGV 61
           EA R +W GA+PLQ+HLH+++VTT       + L PRIGYLPLL   IK +FSSTLPPG+
Sbjct: 14  EAARRVWGGAVPLQVHLHDADVTTLPPPPPFLTLGPRIGYLPLLVPIIKAHFSSTLPPGI 73

Query: 62  DTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWSF 121
           DT+WFEYKGLPLKW+IP GVL+DLLCA+PERPWNLTVHFRGYP ++L  C+GEDS+KWS+
Sbjct: 74  DTVWFEYKGLPLKWYIPIGVLYDLLCADPERPWNLTVHFRGYPSEILTLCDGEDSVKWSY 133

Query: 122 INSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLLK 181
           +NSLKEA +I+ GN+KNVM+MSQ D   LW+SV+ G+L+ Y+ IS++LKLG  + + L++
Sbjct: 134 MNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKGNLDGYMNISTRLKLGPFEEDCLVR 193

Query: 182 SISTSSLPGQSTS-EMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 241
              TSS+ GQ  S E +  G     R+PVRLYVR+V ED  +LEDA PV  W+ +SYINR
Sbjct: 194 ---TSSVEGQQGSDEPESPGSGKPCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINR 253

Query: 242 PVEIHEE--CKCFTLHDAIRSLLSELFLEKAT 271
           P E+  E      TL  A+++LL E F  KA+
Sbjct: 254 PFEVRREEGRSYITLEHALKTLLPEFFSSKAS 282

[Close]

BLAST of Carg24250 vs. Swiss-Prot
Match: sp|A1DMA1|ATG5_NEOFI (Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=atg5 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.6e-30
Identity = 70/189 (37.04%), Postives = 107/189 (56.61%), Query Frame = 0


Query: 5   RYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTL-PPGVDT 64
           R +W+G +PLQI L  SE  T       ++  PRI YLP L  +++ +FSS+L  P    
Sbjct: 18  RAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFSSSLIEPNSQP 77

Query: 65  I--WFEYKGLPLKWHIPTGVLFDLLC-AEPER-------------------PWNLTVHFR 124
              WF ++G+PLKWH+P G+L+DL   A+P                     PW LTVHF 
Sbjct: 78  HEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRIDETDHPSSSLSDTLPWRLTVHFS 137

Query: 125 GYPRQLLIPCEGEDSIKW-SFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLE 170
            +P + L+  + +  +   +FINS+KEAD++ NG  K +M++S+ D   LW++V + DL 
Sbjct: 138 DWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDSAGLWQAVQDVDLP 197

[Close]

BLAST of Carg24250 vs. Swiss-Prot
Match: sp|Q4WNA5|ATG5_ASPFU (Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=atg5 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.3e-29
Identity = 69/189 (36.51%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 5   RYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFS-STLPPGVDT 64
           R +W+G +PLQI L  SE  T       ++  PRI YLP L  +++ +FS S + P    
Sbjct: 18  RAVWDGKLPLQITLASSESRTYDQTDPYLIACPRISYLPSLLPRLRAFFSPSLIEPNSQP 77

Query: 65  I--WFEYKGLPLKWHIPTGVLFDLLC-AEPER-------------------PWNLTVHFR 124
              WF ++G+PLKWH+P G+L+DL   A+P                     PW LTVHF 
Sbjct: 78  HEGWFSFEGVPLKWHLPVGLLYDLYAGADPASKGTRVDETDHPTSSLNDTLPWRLTVHFS 137

Query: 125 GYPRQLLIPCEGEDSIKW-SFINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLE 170
            +P + L+  + +  +   +FINS+KEAD++ NG  K +M++S+ D   LW++V + DL 
Sbjct: 138 DWPDEELVRLDADGMVMHDAFINSVKEADFLRNGTAKGIMTLSKEDSAGLWQAVQDVDLL 197

[Close]

BLAST of Carg24250 vs. TrEMBL
Match: tr|A0A1S3C294|A0A1S3C294_CUCME (Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.4e-140
Identity = 253/292 (86.64%), Postives = 273/292 (93.49%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           M+AL+YIWEGAIPLQIHLHESEVT XXXXXXXMVLAPRIGYLPLLASQIKPYF STLPPG
Sbjct: 1   MDALKYIWEGAIPLQIHLHESEVTXXXXXXXXMVLAPRIGYLPLLASQIKPYFGSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEY+GLPLKW+IPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS
Sbjct: 61  VDTIWFEYQGLPLKWNIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEADYIVNGNTKNVMSMS+PDL+ LWRSV N DLEAYLRISSKLKLGGT  E +L
Sbjct: 121 FINSLKEADYIVNGNTKNVMSMSEPDLLELWRSVSNVDLEAYLRISSKLKLGGTGLEHVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSIS +SLP +S+ EMDIAG+++TGRIPVRLYVRN+G+DFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISAASLPAKSSGEMDIAGQLITGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFN 293
           PVEI EE KCFTLHDA+RSLL ELF EKATTK+EST +IG EEQSD TEQ +
Sbjct: 241 PVEIQEEGKCFTLHDAVRSLLPELFTEKATTKDESTNVIG-EEQSDSTEQLD 291

[Close]

BLAST of Carg24250 vs. TrEMBL
Match: tr|A0A1S3C2S2|A0A1S3C2S2_CUCME (Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 6.9e-116
Identity = 223/292 (76.37%), Postives = 243/292 (83.22%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           M+AL+YIWEGAIPLQIHLHESEVT XXXXXXXMVLAPRIGYLPLLASQIKPYF STLPPG
Sbjct: 1   MDALKYIWEGAIPLQIHLHESEVTXXXXXXXXMVLAPRIGYLPLLASQIKPYFGSTLPPG 60

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWFEY+GLPLKW+IPTGVLFDLLCAEPERPWNLT                       
Sbjct: 61  VDTIWFEYQGLPLKWNIPTGVLFDLLCAEPERPWNLT----------------------- 120

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
                  ADYIVNGNTKNVMSMS+PDL+ LWRSV N DLEAYLRISSKLKLGGT  E +L
Sbjct: 121 -------ADYIVNGNTKNVMSMSEPDLLELWRSVSNVDLEAYLRISSKLKLGGTGLEHVL 180

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           KSIS +SLP +S+ EMDIAG+++TGRIPVRLYVRN+G+DFDNLEDAPPVN+WDDVSYINR
Sbjct: 181 KSISAASLPAKSSGEMDIAGQLITGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINR 240

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQFN 293
           PVEI EE KCFTLHDA+RSLL ELF EKATTK+EST +IG EEQSD TEQ +
Sbjct: 241 PVEIQEEGKCFTLHDAVRSLLPELFTEKATTKDESTNVIG-EEQSDSTEQLD 261

[Close]

BLAST of Carg24250 vs. TrEMBL
Match: tr|A0A2I4E862|A0A2I4E862_9ROSI (Autophagy protein 5 OS=Juglans regia OX=51240 GN=LOC108987175 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 7.6e-115
Identity = 203/291 (69.76%), Postives = 233/291 (80.07%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEA +Y+WEGAIPLQIHLHESEVTT       ++LAPRIGYLPLL   IKP+F+STLPPG
Sbjct: 2   MEAQKYVWEGAIPLQIHLHESEVTTLPPPLPALILAPRIGYLPLLIPHIKPHFNSTLPPG 61

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDT+WFEYKGLPLKW+IPTGVLFDLLC EPERPWNLTVHFRGYP  +LIPCEGEDS+KWS
Sbjct: 62  VDTVWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPGNILIPCEGEDSVKWS 121

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEA YI+NGN KNVM+MSQPD V LW SV NG+LEAYL++SSKLKLG   HE   
Sbjct: 122 FINSLKEASYIINGNCKNVMNMSQPDQVELWHSVFNGNLEAYLKVSSKLKLGTAGHEYSA 181

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
              S S +  QST + D  G+V TGR+PVRLYV  V EDFD+LEDAP ++SWD +SYINR
Sbjct: 182 NLNSGSFVSRQSTGDTDATGQVKTGRVPVRLYVWGVSEDFDDLEDAPQIDSWDKISYINR 241

Query: 241 PVEIH-EECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           PVEIH EE KCFTL DA++SLL E F  K+ T EES+   GE+EQ   +E+
Sbjct: 242 PVEIHGEEGKCFTLLDAVKSLLPEHFQYKSLTNEESSKEEGEDEQKVPSEE 292

[Close]

BLAST of Carg24250 vs. TrEMBL
Match: tr|A0A2I4E868|A0A2I4E868_9ROSI (Autophagy protein 5 OS=Juglans regia OX=51240 GN=LOC108987175 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.9e-113
Identity = 203/292 (69.52%), Postives = 233/292 (79.79%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEA +Y+WEGAIPLQIHLHESEVTT       ++LAPRIGYLPLL   IKP+F+STLPPG
Sbjct: 2   MEAQKYVWEGAIPLQIHLHESEVTTLPPPLPALILAPRIGYLPLLIPHIKPHFNSTLPPG 61

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDT+WFEYKGLPLKW+IPTGVLFDLLC EPERPWNLTVHFRGYP  +LIPCEGEDS+KWS
Sbjct: 62  VDTVWFEYKGLPLKWYIPTGVLFDLLCVEPERPWNLTVHFRGYPGNILIPCEGEDSVKWS 121

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLN-GDLEAYLRISSKLKLGGTDHEQL 180
           FINSLKEA YI+NGN KNVM+MSQPD V LW SV N G+LEAYL++SSKLKLG   HE  
Sbjct: 122 FINSLKEASYIINGNCKNVMNMSQPDQVELWHSVFNAGNLEAYLKVSSKLKLGTAGHEYS 181

Query: 181 LKSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYIN 240
               S S +  QST + D  G+V TGR+PVRLYV  V EDFD+LEDAP ++SWD +SYIN
Sbjct: 182 ANLNSGSFVSRQSTGDTDATGQVKTGRVPVRLYVWGVSEDFDDLEDAPQIDSWDKISYIN 241

Query: 241 RPVEIH-EECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGEEEQSDCTEQ 291
           RPVEIH EE KCFTL DA++SLL E F  K+ T EES+   GE+EQ   +E+
Sbjct: 242 RPVEIHGEEGKCFTLLDAVKSLLPEHFQYKSLTNEESSKEEGEDEQKVPSEE 293

[Close]

BLAST of Carg24250 vs. TrEMBL
Match: tr|A0A2P6PCT8|A0A2P6PCT8_ROSCH (Autophagy protein 5 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0220631 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 7.9e-112
Identity = 196/281 (69.75%), Postives = 233/281 (82.92%), Query Frame = 0


Query: 1   MEALRYIWEGAIPLQIHLHESEVTTXXXXXXXMVLAPRIGYLPLLASQIKPYFSSTLPPG 60
           MEA R++WEGAIPLQIHLHESEVTT       ++LAPR+GYLPLLAS +KPYFS+ LPPG
Sbjct: 3   MEAQRFLWEGAIPLQIHLHESEVTTLPSPPPALILAPRLGYLPLLASHLKPYFSTALPPG 62

Query: 61  VDTIWFEYKGLPLKWHIPTGVLFDLLCAEPERPWNLTVHFRGYPRQLLIPCEGEDSIKWS 120
           VDTIWF+YKGLPLKW+IPTGVLFDLLCAEPERPWNLTVHFRGYP  +LIPCEGEDSIKW+
Sbjct: 63  VDTIWFDYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILIPCEGEDSIKWN 122

Query: 121 FINSLKEADYIVNGNTKNVMSMSQPDLVVLWRSVLNGDLEAYLRISSKLKLGGTDHEQLL 180
           FINSLKEA YI+NGN KNVM+MSQPD V LWRSVLNG+L++Y R+SSKLKL     E + 
Sbjct: 123 FINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNGNLDSYRRVSSKLKL-----EAVG 182

Query: 181 KSISTSSLPGQSTSEMDIAGKVMTGRIPVRLYVRNVGEDFDNLEDAPPVNSWDDVSYINR 240
           +  S+S     S  E+D++G+V  GR+PVRLYV NV EDFD+LEDAPPV+SWD VSYINR
Sbjct: 183 EMNSSSPRSRLSMGEVDVSGQVKPGRVPVRLYVWNVSEDFDDLEDAPPVDSWDKVSYINR 242

Query: 241 PVEIHEECKCFTLHDAIRSLLSELFLEKATTKEESTTIIGE 282
           PVEI +E +CFTLHDA++SLL + F+ K+    ES T++G+
Sbjct: 243 PVEI-QEGRCFTLHDAVKSLLPDYFVVKSLGTAESLTVVGD 277

The following BLAST results are available for this feature:

BLAST of Carg24250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935041.1	3.3e-162	99.66	autophagy protein 5 isoform X2 [Cucurbita moschata]	[more]
XP_022935040.1	8.1e-161	99.31	autophagy protein 5 isoform X1 [Cucurbita moschata]	[more]
XP_022982728.1	4.5e-159	95.17	autophagy protein 5 isoform X2 [Cucurbita maxima]	[more]
XP_023528056.1	5.8e-159	97.24	autophagy protein 5 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022982727.1	1.1e-157	94.85	autophagy protein 5 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg24250 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17290.1	3.1e-106	61.94	autophagy protein Apg5 family	[more]

BLAST of Carg24250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FFI2\|ATG5_ARATH	5.6e-105	61.94	Autophagy protein 5 OS=Arabidopsis thaliana OX=3702 GN=ATG5 PE=2 SV=1	[more]
sp\|A2X052\|ATG5_ORYSI	2.3e-90	57.72	Autophagy protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ATG5 PE=3 SV=2	[more]
sp\|Q6ZGL4\|ATG5_ORYSJ	3.3e-89	57.35	Autophagy protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ATG5 PE=2 SV=1	[more]
sp\|A1DMA1\|ATG5_NEOFI	4.6e-30	37.04	Autophagy protein 5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 5...	[more]
sp\|Q4WNA5\|ATG5_ASPFU	2.3e-29	36.51	Autophagy protein 5 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS ...	[more]

BLAST of Carg24250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C294\|A0A1S3C294_CUCME	1.4e-140	86.64	Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1	[more]
tr\|A0A1S3C2S2\|A0A1S3C2S2_CUCME	6.9e-116	76.37	Autophagy protein 5 OS=Cucumis melo OX=3656 GN=LOC103496203 PE=3 SV=1	[more]
tr\|A0A2I4E862\|A0A2I4E862_9ROSI	7.6e-115	69.76	Autophagy protein 5 OS=Juglans regia OX=51240 GN=LOC108987175 PE=3 SV=1	[more]
tr\|A0A2I4E868\|A0A2I4E868_9ROSI	1.9e-113	69.52	Autophagy protein 5 OS=Juglans regia OX=51240 GN=LOC108987175 PE=3 SV=1	[more]
tr\|A0A2P6PCT8\|A0A2P6PCT8_ROSCH	7.9e-112	69.75	Autophagy protein 5 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0220631 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006914	autophagy

Vocabulary: **INTERPRO**
Term	Definition
IPR007239	Atg5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24250-RA	Carg24250-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007239	Autophagy-related protein 5	PFAM	PF04106	APG5	coord: 75..274 e-value: 2.8E-45 score: 154.4
IPR007239	Autophagy-related protein 5	PANTHER	PTHR13040	AUTOPHAGY PROTEIN 5	coord: 2..275
None	No IPR available	GENE3D	G3DSA:3.10.20.620		coord: 11..108 e-value: 1.6E-33 score: 116.8
None	No IPR available	GENE3D	G3DSA:1.10.246.190		coord: 109..171 e-value: 2.1E-23 score: 83.7
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 193..285 e-value: 2.6E-7 score: 32.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24250	Cla013118	Watermelon (97103) v1	carwmB0166
Carg24250	Csa3G197920	Cucumber (Chinese Long) v2	carcuB0196
Carg24250	MELO3C019565	Melon (DHL92) v3.5.1	carmeB0181
Carg24250	ClCG05G010470	Watermelon (Charleston Gray)	carwcgB0168
Carg24250	CSPI03G17930	Wild cucumber (PI 183967)	carcpiB0203
Carg24250	Cucsa.108720	Cucumber (Gy14) v1	carcgyB0216
Carg24250	CmaCh14G008790	Cucurbita maxima (Rimu)	carcmaB0240
Carg24250	CmoCh14G008980	Cucurbita moschata (Rifu)	carcmoB0248
Carg24250	Lsi05G002590	Bottle gourd (USVL1VR-Ls)	carlsiB158
Carg24250	Cp4.1LG03g05690	Cucurbita pepo (Zucchini)	carcpeB0257
Carg24250	CsGy3G017890	Cucumber (Gy14) v2	carcgybB0190
Carg24250	MELO3C019565.2	Melon (DHL92) v3.6.1	carmedB0185
Carg24250	CsaV3_3G018020	Cucumber (Chinese Long) v3	carcucB0203
Carg24250	Cla97C05G092850	Watermelon (97103) v2	carwmbB0181
Carg24250	Bhi01G001301	Wax gourd	carwgoB0227

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24250	Silver-seed gourd	carcarB213
Carg24250	Cucurbita maxima (Rimu)	carcmaB0241
Carg24250	Cucurbita moschata (Rifu)	carcmoB0249
Carg24250	Cucurbita pepo (Zucchini)	carcpeB0256