Cla013118 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla013118
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Autophagy protein 5 (AHRD V1 ***- B6TJE5_MAIZE); contains Interpro domain(s) IPR007239 Autophagy-related protein 5
Location	Chr5 : 11102637 .. 11105163 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATATTTGGTGAAAGAGAGATTTTCTGCAAGTTGACCAAGGATATTCATTATAACCAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTGAACCTGATCTGGTGGAGTTATGGCGTTTAGTATCGAATGGTATGCTAGCAAGTGCAGTAGTACCTTCGTTCTAGAAATTAAATCAATAGTTTATCAATTTCGAATGATGATGACTTGATGGCATTTTACTTTAGCTTTCCATAATTTTGCACTTTTATCTAAGTTAATATTGCAATAGTATTTTGTAATTTTGCACTTAAATTATTTTTGTGATATAGTTAATTTTGCAGCCTCCAATTAAAGCACCGTTTTCTAAAAAGAACCATGTAATATACAGCCTAGGAGCCAAGGATTGAGAAAACCCCTACATGAAACTACAGAAGGAGAACCTTCTAATAGTTTATAATTATAAAAATGTGTAATTACGTAATAATTTCTGATGGTTAGAGCACTGCCAATAAGTATTATGTTGTATGTTTACCATCTTATCTTAAAAAGTCCTCTAGTTTCTTTCCTTCCTAATCAGTCAAACAACAGCACCATTTTTATGAACTTTTGTAATGATTCCTCTTTCTTTTATTATTCCAATAGTAATATTATTGGCAAGCTCAATTGTTTAGAGGGGCTCTCCCTCCTTATGTGTCTCTTCATTGATTTGTATAAAAGGATTTCCTATTTCTATTGTAGAAGCAGGAACATAAATTATATTGAAGTTAGGAGGACTGTTTATATTTAAGGAAAAAAATACCGAATAGATAAGGTCATTATAAGATTATAACTAGTATGACTAATGTTTATGAAGAATATAAAGGAAATCCAATGGACTTCATAATGTGTTTTCTTCTAATTTTTTTGGCTTGCTGATTGGCTGCTAGCAAGTGATTTAGAAGCCTACCTACGTATATCGTCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGGTCAAAGTACTGGTGAGATGGATATAGCAGGACAACTAATGACAGGTATGACTTTTTGTGCTTCTACTAATAGATTATTTTGCCTCTGCATCTAATTTTGTATTGGAGATTTATTGTGTGGACCCTTTTGCTCGTTGTTCAGATGGTTACATTTTGTAATATTCCTAATAATTTGTCTCTTCATCTACTCTTTTAAAAGACTTCACCGTCTAGTGTAGTATTTTGACGACATATATTTTCTCTTCGAGGGGGAGAGTTGTTCCAAATTATCGTTTTGACTTCAAATGTGACTATGTGAGACGTTTATGCTAAAAAGACTTTTGACTTCAAACTAGTAGGGTTTTATCATTCTACTGTCCGCCTATTGTACTTGAGACGCAAAAGAATCTCTGCTTATGCATGTCAATCAAAGCAAGTTTTGGTTTGCAAGATATTGGATTTCCATCAAAATTACACGAGGGTTCCGTGTGTGTATGATTTTTAAGTTCTCACACACCTCTGTTACTCTCTGTGTAAGATCTCAATCTATAATGAAGAAATGATAGTAGCTCGTTGTTCCATGCTTATATTCATGAACCCCGCTTTATGTTATCATTTCACTTGTAAGGATAAGTTTCTTATTACTTCAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATAATTTAGAAGATGCACCACCAGTTAACAATTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAAGGTAACGCAAAGTTAATTATCACTCTTTGTTTTTAGTTTTCTTATTCTTTTGGAACAGTCTATTATATGAGTATGGTGTTATTGACTAGCCAGATTTATGTTGTCCAATCGATAAAAGAATGATAAAAGAAAGATTAAGGGCTAATTTATAAACATGGAGAATTGAGTGTAGATCGATTTTCCTCGATTAATCAAGAATTCTTGTGCTTAAAAATATAGTTGTCATATTGGTTTAAGGTGTAATCCACGACCACAAAGGCCAACAGTTCGAATTCCCACCCACACATGTTGAAAACACACAGGAGGTTCAGCTTATGATGCATTGTTATGTAGCAATTGCGATTTAGTTGTTGACAGTCTAAGCATATGCAGAGATTTTCTTCCTCATCTTTATATGTTGCAGGTAAGTGCTTCACCTTGCTAGATGCTGTTAGGAGTCTGTTACCCGAGCTTTTCACCGAAAAGGAGACTACCAAGGAAGAATCGACCAATGTTATAGGTGAAGAACAAATTGATTGTACAGAACAGTTGAATTGTACCAAAACAGAAGAAAGGGCACCAAATTTTTCTGAGGAACATGTGCAATCTTATCATCCTAGCATCAAGCTTGTTAGGATCCAAGGGATTGAACCAAAATGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAACCCTGAATACTTCCTTCATATCTGTGTTTTTGTATCAGTTCAACAAGTCAGATGCTAA

mRNA sequence

ATGATATTTGGTGAAAGAGAGATTTTCTGCAAGTTGACCAAGGATATTCATTATAACCAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTGAACCTGATCTGGTGGAGTTATGGCGTTTAGTATCGAATGCAAGTGATTTAGAAGCCTACCTACGTATATCGTCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGGTCAAAGTACTGGTGAGATGGATATAGCAGGACAACTAATGACAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATAATTTAGAAGATGCACCACCAGTTAACAATTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAAGGTAAGTGCTTCACCTTGCTAGATGCTGTTAGGAGTCTGTTACCCGAGCTTTTCACCGAAAAGGAGACTACCAAGGAAGAATCGACCAATGTTATAGGTGAAGAACAAATTGATTGTACAGAACAGTTGAATTGTACCAAAACAGAAGAAAGGGCACCAAATTTTTCTGAGGAACATGTGCAATCTTATCATCCTAGCATCAAGCTTGTTAGGATCCAAGGGATTGAACCAAAATGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAACCCTGAATACTTCCTTCATATCTGTGTTTTTGTATCAGTTCAACAAGTCAGATGCTAA

Coding sequence (CDS)

ATGATATTTGGTGAAAGAGAGATTTTCTGCAAGTTGACCAAGGATATTCATTATAACCAGGCCGATTACATTGTCAATGGGAACACCAAGAATGTCATGAGCATGTCTGAACCTGATCTGGTGGAGTTATGGCGTTTAGTATCGAATGCAAGTGATTTAGAAGCCTACCTACGTATATCGTCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGGTCAAAGTACTGGTGAGATGGATATAGCAGGACAACTAATGACAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATAATTTAGAAGATGCACCACCAGTTAACAATTGGGATGATGTCTCATACATTAACCGTCCAGTAGAGATTCATGAAGAAGGTAAGTGCTTCACCTTGCTAGATGCTGTTAGGAGTCTGTTACCCGAGCTTTTCACCGAAAAGGAGACTACCAAGGAAGAATCGACCAATGTTATAGGTGAAGAACAAATTGATTGTACAGAACAGTTGAATTGTACCAAAACAGAAGAAAGGGCACCAAATTTTTCTGAGGAACATGTGCAATCTTATCATCCTAGCATCAAGCTTGTTAGGATCCAAGGGATTGAACCAAAATGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAACCCTGAATACTTCCTTCATATCTGTGTTTTTGTATCAGTTCAACAAGTCAGATGCTAA

Protein sequence

MIFGEREIFCKLTKDIHYNQADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSISTASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVEIHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNFSEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQVRC

Homology

[Close]

BLAST of Cla013118 vs. Swiss-Prot
Match: ATG5_ARATH (Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.4e-53
Identity = 113/233 (48.50%), Postives = 145/233 (62.23%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A YI+NGN KNVM+MS+ D  +LW  V N  DL+AY R+S KLK+G    E   K+  +
Sbjct: 129 EAQYIINGNCKNVMNMSQSDQEDLWTSVMNG-DLDAYTRLSPKLKMGTVEDEFSRKTSLS 188

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
           +    Q   E ++AGQ+ TA   RIPVRLYVR+L  DF+NLED P ++ WDD+SY+NRPV
Sbjct: 189 SPQSQQVVPETEVAGQVKTA---RIPVRLYVRSLNKDFENLEDVPEIDTWDDISYLNRPV 248

Query: 140 E-IHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPN 199
           E + EEGKCFTL DA++SLLPE   ++  T  E  ++   E+ D + ++           
Sbjct: 249 EFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSGEERSIDDTEEADGSREMG---------- 308

Query: 200 FSEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQ 252
                       IKLVRIQGIE K +IPFSWVVNNLMNPE++LHI V V   Q
Sbjct: 309 -----------EIKLVRIQGIEMKLEIPFSWVVNNLMNPEFYLHISVLVKAPQ 336

[Close]

BLAST of Cla013118 vs. Swiss-Prot
Match: ATG5_ORYSI (Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.5e-39
Identity = 96/242 (39.67%), Postives = 145/242 (59.92%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A +I+ GN+KNVM+MS+ D   LW+ V   + L+ Y+ IS++LKLG    + ++++ S 
Sbjct: 139 EAAFIITGNSKNVMNMSQADQGALWQSVMKGN-LDGYMNISTRLKLGPFEEDCLVRTSSV 198

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
               G    E   +G+     P R+PVRLYVR++ +D  +LEDA PV +W+ +SYINRP 
Sbjct: 199 EGQQGSDEPESPGSGK-----PCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPF 258

Query: 140 EIH-EEGKCF-TLLDAVRSLLPELFTEKET-------TKEESTNVIGEEQIDCTEQLNCT 199
           E+  EEG+ + TL  A+++LLPE F+ K +       T  ++ +    +  D T + +C 
Sbjct: 259 EVRREEGRSYITLEHALKTLLPEFFSSKASRIPDDSETAPQAPDSAPNDDSDVTPR-SCE 318

Query: 200 KTEERAPNFSEE-HVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSV 252
           K E  A +  +E +V +    +KLVR+QGIE    IPF WV NNL NPE +LHICV+V  
Sbjct: 319 KLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWVANNLKNPECYLHICVYVGT 373

[Close]

BLAST of Cla013118 vs. Swiss-Prot
Match: ATG5_ORYSJ (Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.5e-39
Identity = 96/242 (39.67%), Postives = 145/242 (59.92%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A +I+ GN+KNVM+MS+ D   LW+ V   + L+ Y+ IS++LKLG    + ++++ S 
Sbjct: 139 EAAFIITGNSKNVMNMSQADQGALWQSVMKGN-LDGYMNISTRLKLGPFEEDCLVRTSSV 198

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
               G    E   +G+     P R+PVRLYVR++ +D  +LEDA PV +W+ +SYINRP 
Sbjct: 199 EGQQGSDEPESPGSGK-----PCRVPVRLYVRSVQEDLYDLEDALPVGDWESISYINRPF 258

Query: 140 EIH-EEGKCF-TLLDAVRSLLPELFTEKET-------TKEESTNVIGEEQIDCTEQLNCT 199
           E+  EEG+ + TL  A+++LLPE F+ K +       T  ++ +    +  D T + +C 
Sbjct: 259 EVRREEGRSYITLEHALKTLLPEFFSSKASRIPDDSETAPQAPDSAPNDDSDVTPR-SCE 318

Query: 200 KTEERAPNFSEE-HVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSV 252
           K E  A +  +E +V +    +KLVR+QGIE    IPF WV NNL NPE +LHICV+V  
Sbjct: 319 KLESSASSSPQEANVANKGKIVKLVRVQGIEVDMDIPFLWVANNLKNPECYLHICVYVGT 373

[Close]

BLAST of Cla013118 vs. TrEMBL
Match: A0A0A0L933_CUCSA (Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197940 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.7e-91
Identity = 181/224 (80.80%), Postives = 190/224 (84.82%), Query Frame = 1


Query: 27  GNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSISTASLPGQS 86
           GN  +V  +S+    E W     + DLEAYLRISSKLKLGGTGHEHVLKSISTASLP +S
Sbjct: 35  GNVSDVRKVSD---TETWP----SFDLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKS 94

Query: 87  TGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVEIHEEGK 146
           TGEMDIA QL+T   GRIPVRLYVRNLGDDFD+LEDAPPVNNWDDVSYINRPVEI EEGK
Sbjct: 95  TGEMDIA-QLIT---GRIPVRLYVRNLGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGK 154

Query: 147 CFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNFSEEHVQS 206
           CFTL DAVRSLLPELF EK TTKEESTNV  E Q D TEQL+CTKTEE   NFSEE+ QS
Sbjct: 155 CFTLHDAVRSLLPELFAEKGTTKEESTNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQS 214

Query: 207 YHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQ 251
           YHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFVSVQ
Sbjct: 215 YHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFVSVQ 247

[Close]

BLAST of Cla013118 vs. TrEMBL
Match: F6HT40_VITVI (Autophagy protein 5 OS=Vitis vinifera GN=VIT_02s0012g02270 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.1e-59
Identity = 131/242 (54.13%), Postives = 165/242 (68.18%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A YIVNGN KNVM+MS+ D +ELW  V N + +EAY R+SSKLKL   G ++V K  S 
Sbjct: 134 EAAYIVNGNCKNVMNMSQSDQMELWHSVLNGN-MEAYQRVSSKLKLEKVGDQYVGKPNSN 193

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
                 +TGE D  G + T   GRIPVRLYV ++  DFD+LEDAP +++WD +SY+NRPV
Sbjct: 194 LLKSRTNTGETDTGGPVKT---GRIPVRLYVWSVSKDFDDLEDAPQIDSWDQISYMNRPV 253

Query: 140 EIH-EEGKCFTLLDAVRSLLPELFTEKETTKEESTNV-IGEEQIDCTEQLNCTKTEERAP 199
           EIH EE KCFTL DAV++LLPELF EK    EE + + + EE    ++  + T+ EE   
Sbjct: 254 EIHREEDKCFTLRDAVKALLPELFVEKTLIDEEISRIELEEESRAPSDDESNTRNEEDVE 313

Query: 200 NFSEEHVQSYHPS------IKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQ 254
               E+V+   PS      +KLVRIQGIEPK +IPFSWVVNNLMNPE+FLHICVFV V Q
Sbjct: 314 EKQRENVECCCPSDDAETKLKLVRIQGIEPKLEIPFSWVVNNLMNPEHFLHICVFVKVPQ 371

[Close]

BLAST of Cla013118 vs. TrEMBL
Match: V4RJI1_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 6.1e-59
Identity = 129/235 (54.89%), Postives = 167/235 (71.06%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSN-ASDLEAYLRISSKLKLGGTGHEHVLKSIS 79
           +A YI+NGN KNVM+MS+ D VELWR V N A +LEAYLR+SSKLKL     ++ +K ++
Sbjct: 129 EAAYIINGNCKNVMNMSQSDQVELWRSVMNVAGNLEAYLRVSSKLKLVTVEDDYTVK-LN 188

Query: 80  TASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRP 139
           ++S   Q TGE D AGQ+ T   GRIPVRLYV ++ +DFD+LEDAP ++ WD +S+INRP
Sbjct: 189 SSSKSQQGTGETDFAGQVKT---GRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRP 248

Query: 140 VEIH-EEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAP 199
           VE+  EEGKCFTL DA+++LLPE FT+K    +ES  +  EE    +E     K  E   
Sbjct: 249 VEVRTEEGKCFTLHDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTE-VE 308

Query: 200 NFSEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQV 253
               EHV + +  IKLVRIQGIEPK +IPFSWVVNNLMNP+YFL++C+ V V +V
Sbjct: 309 EILYEHV-TRNAEIKLVRIQGIEPKLEIPFSWVVNNLMNPDYFLYMCICVRVPEV 357

[Close]

BLAST of Cla013118 vs. TrEMBL
Match: V4U4U7_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.8e-58
Identity = 128/234 (54.70%), Postives = 166/234 (70.94%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A YI+NGN KNVM+MS+ D VELWR V N + LEAYLR+SSKLKL     ++ +K +++
Sbjct: 129 EAAYIINGNCKNVMNMSQSDQVELWRSVMNGN-LEAYLRVSSKLKLVTVEDDYTVK-LNS 188

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
           +S   Q TGE D AGQ+ T   GRIPVRLYV ++ +DFD+LEDAP ++ WD +S+INRPV
Sbjct: 189 SSKSQQGTGETDFAGQVKT---GRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPV 248

Query: 140 EIH-EEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPN 199
           E+  EEGKCFTL DA+++LLPE FT+K    +ES  +  EE    +E     K  E    
Sbjct: 249 EVRTEEGKCFTLHDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTE-VEE 308

Query: 200 FSEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQV 253
              EHV + +  IKLVRIQGIEPK +IPFSWVVNNLMNP+YFL++C+ V V +V
Sbjct: 309 ILYEHV-TRNAEIKLVRIQGIEPKLEIPFSWVVNNLMNPDYFLYMCICVRVPEV 355

[Close]

BLAST of Cla013118 vs. TrEMBL
Match: V4S1S6_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.1e-57
Identity = 127/235 (54.04%), Postives = 165/235 (70.21%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +A YI+NGN KNVM+MS+ D VELWR V N + LEAYLR+SSKLKL     ++ +K +++
Sbjct: 129 EAAYIINGNCKNVMNMSQSDQVELWRSVMNGN-LEAYLRVSSKLKLVTVEDDYTVK-LNS 188

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
           +S   Q TGE D AGQ+ T   GRIPVRLYV ++ +DFD+LEDAP ++ WD +S+INRPV
Sbjct: 189 SSKSQQGTGETDFAGQVKT---GRIPVRLYVWSVSEDFDDLEDAPDIDCWDKISFINRPV 248

Query: 140 EIHEE--GKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAP 199
           E+  E  GKCFTL DA+++LLPE FT+K    +ES  +  EE    +E     K  E   
Sbjct: 249 EVRTEEAGKCFTLHDAIKTLLPEYFTDKPLFNDESPKLEDEEMNLSSEDAGSNKNTE-VE 308

Query: 200 NFSEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQQV 253
               EHV + +  IKLVRIQGIEPK +IPFSWVVNNLMNP+YFL++C+ V V +V
Sbjct: 309 EILYEHV-TRNAEIKLVRIQGIEPKLEIPFSWVVNNLMNPDYFLYMCICVRVPEV 356

[Close]

BLAST of Cla013118 vs. NCBI nr
Match: gi|449446111|ref|XP_004140815.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 1.6e-105
Identity = 201/231 (87.01%), Postives = 209/231 (90.48%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +ADYI+NGNTKNVMSMSEPDL+ELWR VSN  DLEAYLRISSKLKLGGTGHEHVLKSIST
Sbjct: 127 EADYIINGNTKNVMSMSEPDLLELWRSVSNV-DLEAYLRISSKLKLGGTGHEHVLKSIST 186

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
           ASLP +STGEMDIA QL+T   GRIPVRLYVRNLGDDFD+LEDAPPVNNWDDVSYINRPV
Sbjct: 187 ASLPAKSTGEMDIA-QLIT---GRIPVRLYVRNLGDDFDHLEDAPPVNNWDDVSYINRPV 246

Query: 140 EIHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNF 199
           EI EEGKCFTL DAVRSLLPELF EK TTKEESTNV  E Q D TEQL+CTKTEE   NF
Sbjct: 247 EIREEGKCFTLHDAVRSLLPELFAEKGTTKEESTNVPSEGQSDSTEQLDCTKTEEGGSNF 306

Query: 200 SEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQ 251
           SEE+ QSYHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFVSVQ
Sbjct: 307 SEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFVSVQ 352

[Close]

BLAST of Cla013118 vs. NCBI nr
Match: gi|778679952|ref|XP_011651221.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-105
Identity = 201/230 (87.39%), Postives = 208/230 (90.43%), Query Frame = 1


Query: 21  ADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSISTA 80
           ADYI+NGNTKNVMSMSEPDL+ELWR VSN  DLEAYLRISSKLKLGGTGHEHVLKSISTA
Sbjct: 98  ADYIINGNTKNVMSMSEPDLLELWRSVSNV-DLEAYLRISSKLKLGGTGHEHVLKSISTA 157

Query: 81  SLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVE 140
           SLP +STGEMDIA QL+T   GRIPVRLYVRNLGDDFD+LEDAPPVNNWDDVSYINRPVE
Sbjct: 158 SLPAKSTGEMDIA-QLIT---GRIPVRLYVRNLGDDFDHLEDAPPVNNWDDVSYINRPVE 217

Query: 141 IHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNFS 200
           I EEGKCFTL DAVRSLLPELF EK TTKEESTNV  E Q D TEQL+CTKTEE   NFS
Sbjct: 218 IREEGKCFTLHDAVRSLLPELFAEKGTTKEESTNVPSEGQSDSTEQLDCTKTEEGGSNFS 277

Query: 201 EEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQ 251
           EE+ QSYHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFVSVQ
Sbjct: 278 EEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFVSVQ 322

[Close]

BLAST of Cla013118 vs. NCBI nr
Match: gi|659112386|ref|XP_008456193.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 386.0 bits (990), Expect = 5.2e-104
Identity = 198/228 (86.84%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 20  QADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSIST 79
           +ADYIVNGNTKNVMSMSEPDL+ELWR VSN  DLEAYLRISSKLKLGGTG EHVLKSIS 
Sbjct: 127 EADYIVNGNTKNVMSMSEPDLLELWRSVSNV-DLEAYLRISSKLKLGGTGLEHVLKSISA 186

Query: 80  ASLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 139
           ASLP +S+GEMDIAGQL+T   GRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV
Sbjct: 187 ASLPAKSSGEMDIAGQLIT---GRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPV 246

Query: 140 EIHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNF 199
           EI EEGKCFTL DAVRSLLPELFTEK TTK+ESTNVIGEEQ D TEQL+CTKTE  + + 
Sbjct: 247 EIQEEGKCFTLHDAVRSLLPELFTEKATTKDESTNVIGEEQSDSTEQLDCTKTEGGSTS- 306

Query: 200 SEEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFV 248
           SEE++QSYHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFV
Sbjct: 307 SEEYLQSYHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFV 349

[Close]

BLAST of Cla013118 vs. NCBI nr
Match: gi|659112388|ref|XP_008456194.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 8.9e-104
Identity = 198/227 (87.22%), Postives = 208/227 (91.63%), Query Frame = 1


Query: 21  ADYIVNGNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSISTA 80
           ADYIVNGNTKNVMSMSEPDL+ELWR VSN  DLEAYLRISSKLKLGGTG EHVLKSIS A
Sbjct: 98  ADYIVNGNTKNVMSMSEPDLLELWRSVSNV-DLEAYLRISSKLKLGGTGLEHVLKSISAA 157

Query: 81  SLPGQSTGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVE 140
           SLP +S+GEMDIAGQL+T   GRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVE
Sbjct: 158 SLPAKSSGEMDIAGQLIT---GRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVE 217

Query: 141 IHEEGKCFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNFS 200
           I EEGKCFTL DAVRSLLPELFTEK TTK+ESTNVIGEEQ D TEQL+CTKTE  + + S
Sbjct: 218 IQEEGKCFTLHDAVRSLLPELFTEKATTKDESTNVIGEEQSDSTEQLDCTKTEGGSTS-S 277

Query: 201 EEHVQSYHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFV 248
           EE++QSYHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFV
Sbjct: 278 EEYLQSYHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFV 319

[Close]

BLAST of Cla013118 vs. NCBI nr
Match: gi|700202346|gb|KGN57479.1| (hypothetical protein Csa_3G197940 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 3.9e-91
Identity = 181/224 (80.80%), Postives = 190/224 (84.82%), Query Frame = 1


Query: 27  GNTKNVMSMSEPDLVELWRLVSNASDLEAYLRISSKLKLGGTGHEHVLKSISTASLPGQS 86
           GN  +V  +S+    E W     + DLEAYLRISSKLKLGGTGHEHVLKSISTASLP +S
Sbjct: 35  GNVSDVRKVSD---TETWP----SFDLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKS 94

Query: 87  TGEMDIAGQLMTACPGRIPVRLYVRNLGDDFDNLEDAPPVNNWDDVSYINRPVEIHEEGK 146
           TGEMDIA QL+T   GRIPVRLYVRNLGDDFD+LEDAPPVNNWDDVSYINRPVEI EEGK
Sbjct: 95  TGEMDIA-QLIT---GRIPVRLYVRNLGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGK 154

Query: 147 CFTLLDAVRSLLPELFTEKETTKEESTNVIGEEQIDCTEQLNCTKTEERAPNFSEEHVQS 206
           CFTL DAVRSLLPELF EK TTKEESTNV  E Q D TEQL+CTKTEE   NFSEE+ QS
Sbjct: 155 CFTLHDAVRSLLPELFAEKGTTKEESTNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQS 214

Query: 207 YHPSIKLVRIQGIEPKCQIPFSWVVNNLMNPEYFLHICVFVSVQ 251
           YHPSIKLVRIQGIEPK QIPFSWVVNNLMNPEYFLHICVFVSVQ
Sbjct: 215 YHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFVSVQ 247

The following BLAST results are available for this feature:

BLAST of Cla013118 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG5_ARATH	9.4e-53	48.50	Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1	[more]
ATG5_ORYSI	3.5e-39	39.67	Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2	[more]
ATG5_ORYSJ	3.5e-39	39.67	Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1	[more]

BLAST of Cla013118 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L933_CUCSA	2.7e-91	80.80	Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197940 PE=3 SV=1	[more]
F6HT40_VITVI	6.1e-59	54.13	Autophagy protein 5 OS=Vitis vinifera GN=VIT_02s0012g02270 PE=3 SV=1	[more]
V4RJI1_9ROSI	6.1e-59	54.89	Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1	[more]
V4U4U7_9ROSI	1.8e-58	54.70	Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1	[more]
V4S1S6_9ROSI	1.1e-57	54.04	Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1	[more]

BLAST of Cla013118 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446111\|ref\|XP_004140815.1\|	1.6e-105	87.01	PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus]	[more]
gi\|778679952\|ref\|XP_011651221.1\|	2.8e-105	87.39	PREDICTED: autophagy protein 5 isoform X2 [Cucumis sativus]	[more]
gi\|659112386\|ref\|XP_008456193.1\|	5.2e-104	86.84	PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo]	[more]
gi\|659112388\|ref\|XP_008456194.1\|	8.9e-104	87.22	PREDICTED: autophagy protein 5 isoform X2 [Cucumis melo]	[more]
gi\|700202346\|gb\|KGN57479.1\|	3.9e-91	80.80	hypothetical protein Csa_3G197940 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007239	Atg5

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006914	autophagy

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006810	transport
biological_process	GO:0006996	organelle organization
biological_process	GO:0042594	response to starvation
biological_process	GO:0044699	single-organism process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0044444	cytoplasmic part
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU40494	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla013118	Cla013118.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU40494	WMU40494	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007239	Autophagy-related protein 5	PANTHER	PTHR13040	AUTOPHAGY PROTEIN 5	coord: 20..252 score: 2.4
IPR007239	Autophagy-related protein 5	PFAM	PF04106	APG5	coord: 20..245 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla013118	Cla97C05G092850	Watermelon (97103) v2	wmwmbB206
Cla013118	Csa3G197940	Cucumber (Chinese Long) v2	cuwmB243
Cla013118	MELO3C019565	Melon (DHL92) v3.5.1	mewmB461
Cla013118	ClCG05G010470	Watermelon (Charleston Gray)	wcgwmB286
Cla013118	CSPI03G17950	Wild cucumber (PI 183967)	cpiwmB242
Cla013118	Cucsa.108740	Cucumber (Gy14) v1	cgywmB153
Cla013118	CmaCh14G008790	Cucurbita maxima (Rimu)	cmawmB243
Cla013118	CmoCh14G008980	Cucurbita moschata (Rifu)	cmowmB232
Cla013118	Lsi05G002590	Bottle gourd (USVL1VR-Ls)	lsiwmB361
Cla013118	Cp4.1LG03g05690	Cucurbita pepo (Zucchini)	cpewmB614
Cla013118	CsGy3G017890	Cucumber (Gy14) v2	cgybwmB229
Cla013118	MELO3C019565.2	Melon (DHL92) v3.6.1	medwmB448
Cla013118	Carg24250	Silver-seed gourd	carwmB0166
Cla013118	CsaV3_3G018020	Cucumber (Chinese Long) v3	cucwmB252
Cla013118	Bhi01G001301	Wax gourd	wgowmB202

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla013118	Silver-seed gourd	carwmB0760
Cla013118	Watermelon (97103) v1	wmwmB131
Cla013118	Cucurbita maxima (Rimu)	cmawmB434
Cla013118	Cucurbita moschata (Rifu)	cmowmB427
Cla013118	Cucurbita pepo (Zucchini)	cpewmB568