Cucsa.108740 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.108740
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionAutophagy protein 5
Locationscaffold00931 : 1009122 .. 1010513 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGACTTAGAAGCCTATCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGCTAAAAGTACTGGCGAGATGGATATAGCCCAATTAATAACAGGTATGACAACCACTTTTAGGCATTTCACTTTTGTGCTTCTACTCATAGATTCTTTGTCCTCGGCATCTATGTTTGCATATTGAAGATTTATTTTGTTGACACTTTTGCTCTTTGTTCAGATGGTTACATTTTGTACTATATTCCTAATAATTTGTGTCTTGACTATATTCTATTCTTCTAAAAGACTTCTCCGTCTAGTGGAGAGTAATTTGCTGACATGTATATTCTCTCGGAGGGGGAGAGTTGTTCCAAATTATTGTTTTGACTTCAAATGTGAGACGTTTTGGTTCTTATGCTAAAAAAaTTCATTGACTTCAAATTAGTTATGTTTTATCATTCAACTTTGCTAATGGTATTGGATTTCCATCCTACATGTGGGTTTTATGTGTATGATTTTTAAATTTTCACTCACCTTTGTTACTCTCACCCCTCAAGTCTAATATTCATTTATACTATCATTTCACTTGCGTTTCTTACTACTTCAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATCATTTAGAAGATGCACCACCAGTTAACAACTGGGATGATGTCTCATACATTAATCGTCCTGTAGAGATCCGTGAAGAAGGTAAAGCAACGTGAACTATCACTTTTTGTTTTTAGGAACGGTCTATTATATGAGCACAGTGTTATTGGATGTGATTGACTAAGCGAGATTTATGCTGTCCAATTGATAAAAGAAAGACTAGAGGCCAATTTATAAACATGTAGAATTGAGTGTAGTTTGATTTTTCACGATCAGTCTGAGTTTCTGTGCTTTAAAAATATAGTTGTCATACTGGTTTAAGGTCTATATCCCATCCATGACCACAAAGGTCAACAGTACAACGTCTAGGCATATTAAGAGATTTTCTTCCTCATCTCCGCACATTGCAGGTAAGTGCTTCACCTTACATGATGCTGTTAGGAGTCTGTTACCTGAGCTTTTTGCCGAAAAGGGGACTACCAAGGAGGAATCAACAAATGTTCCAAGTGAAGGACAAAGTGATAGTACAGAACAGTTGGATTGTACCAAAACAGAAGAAGGGGGATCAAATTTTTCTGAGGAATATTTCCAATCTTATCATCCTAGCATCAAGCTGGTTAGGATCCAAGGGATTGAACCAAAAGGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAATCCTGAATACTTCCTCCATATCTGTGTTTTTGTATCTGTTCAATAA

mRNA sequence

TTGACTTAGAAGCCTATCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGCTAAAAGTACTGGCGAGATGGATATAGCCCAATTAATAACAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATCATTTAGAAGATGCACCACCAGTTAACAACTGGGATGATGTCTCATACATTAATCGTCCTGTAGAGATCCGTGAAGAAGGTAAGTGCTTCACCTTACATGATGCTGTTAGGAGTCTGTTACCTGAGCTTTTTGCCGAAAAGGGGACTACCAAGGAGGAATCAACAAATGTTCCAAGTGAAGGACAAAGTGATAGTACAGAACAGTTGGATTGTACCAAAACAGAAGAAGGGGGATCAAATTTTTCTGAGGAATATTTCCAATCTTATCATCCTAGCATCAAGCTGGTTAGGATCCAAGGGATTGAACCAAAAGGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAATCCTGAATACTTCCTCCATATCTGTGTTTTTGTATCTGTTCAATAA

Coding sequence (CDS)

TTGACTTAGAAGCCTATCTACGTATATCATCTAAACTTAAGCTTGGAGGAACTGGTCACGAGCATGTGTTGAAATCTATATCAACTGCATCATTGCCTGCTAAAAGTACTGGCGAGATGGATATAGCCCAATTAATAACAGCATGTCCAGGTCGAATTCCAGTTCGATTGTATGTAAGGAATTTAGGTGATGATTTTGATCATTTAGAAGATGCACCACCAGTTAACAACTGGGATGATGTCTCATACATTAATCGTCCTGTAGAGATCCGTGAAGAAGGTAAGTGCTTCACCTTACATGATGCTGTTAGGAGTCTGTTACCTGAGCTTTTTGCCGAAAAGGGGACTACCAAGGAGGAATCAACAAATGTTCCAAGTGAAGGACAAAGTGATAGTACAGAACAGTTGGATTGTACCAAAACAGAAGAAGGGGGATCAAATTTTTCTGAGGAATATTTCCAATCTTATCATCCTAGCATCAAGCTGGTTAGGATCCAAGGGATTGAACCAAAAGGCCAAATTCCTTTCTCCTGGGTAGTGAACAACTTAATGAATCCTGAATACTTCCTCCATATCTGTGTTTTTGTATCTGTTCAATAA

Protein sequence

DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRNLGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEESTNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVNNLMNPEYFLHICVFVSVQ*
Homology
[Close]
BLAST of Cucsa.108740 vs. Swiss-Prot
Match: ATG5_ARATH (Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-40
Identity = 96/197 (48.73%), Postives = 125/197 (63.45%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIA-QLITACPGRIPVRLYVR 60
           DL+AY R+S KLK+G    E   K+  ++    +   E ++A Q+ TA   RIPVRLYVR
Sbjct: 160 DLDAYTRLSPKLKMGTVEDEFSRKTSLSSPQSQQVVPETEVAGQVKTA---RIPVRLYVR 219

Query: 61  NLGDDFDHLEDAPPVNNWDDVSYINRPVE-IREEGKCFTLHDAVRSLLPELFAEKGTTKE 120
           +L  DF++LED P ++ WDD+SY+NRPVE ++EEGKCFTL DA++SLLPE   ++  T  
Sbjct: 220 SLNKDFENLEDVPEIDTWDDISYLNRPVEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSG 279

Query: 121 ESTNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWV 180
           E  ++      D TE+ D      G     E         IKLVRIQGIE K +IPFSWV
Sbjct: 280 EERSI------DDTEEAD------GSREMGE---------IKLVRIQGIEMKLEIPFSWV 332

Query: 181 VNNLMNPEYFLHICVFV 196
           VNNLMNPE++LHI V V
Sbjct: 340 VNNLMNPEFYLHISVLV 332

[Close]
BLAST of Cucsa.108740 vs. Swiss-Prot
Match: ATG5_ORYSI (Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 80/207 (38.65%), Postives = 118/207 (57.00%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           +L+ Y+ IS++LKLG    + ++++ S          E   +      P R+PVRLYVR+
Sbjct: 170 NLDGYMNISTRLKLGPFEEDCLVRTSSVEGQQGSDEPESPGS----GKPCRVPVRLYVRS 229

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEI-REEGKCF-TLHDAVRSLLPELFAEKGT--- 120
           + +D   LEDA PV +W+ +SYINRP E+ REEG+ + TL  A+++LLPE F+ K +   
Sbjct: 230 VQEDLYDLEDALPVGDWESISYINRPFEVRREEGRSYITLEHALKTLLPEFFSSKASRIP 289

Query: 121 -TKEESTNVPSEGQSDSTE--QLDCTKTEEGGSNFSEE-YFQSYHPSIKLVRIQGIEPKG 180
              E +   P    +D ++     C K E   S+  +E    +    +KLVR+QGIE   
Sbjct: 290 DDSETAPQAPDSAPNDDSDVTPRSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDM 349

Query: 181 QIPFSWVVNNLMNPEYFLHICVFVSVQ 199
            IPF WV NNL NPE +LHICV+V  +
Sbjct: 350 DIPFLWVANNLKNPECYLHICVYVGTR 372

[Close]
BLAST of Cucsa.108740 vs. Swiss-Prot
Match: ATG5_ORYSJ (Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 80/207 (38.65%), Postives = 118/207 (57.00%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           +L+ Y+ IS++LKLG    + ++++ S          E   +      P R+PVRLYVR+
Sbjct: 170 NLDGYMNISTRLKLGPFEEDCLVRTSSVEGQQGSDEPESPGS----GKPCRVPVRLYVRS 229

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEI-REEGKCF-TLHDAVRSLLPELFAEKGT--- 120
           + +D   LEDA PV +W+ +SYINRP E+ REEG+ + TL  A+++LLPE F+ K +   
Sbjct: 230 VQEDLYDLEDALPVGDWESISYINRPFEVRREEGRSYITLEHALKTLLPEFFSSKASRIP 289

Query: 121 -TKEESTNVPSEGQSDSTE--QLDCTKTEEGGSNFSEE-YFQSYHPSIKLVRIQGIEPKG 180
              E +   P    +D ++     C K E   S+  +E    +    +KLVR+QGIE   
Sbjct: 290 DDSETAPQAPDSAPNDDSDVTPRSCEKLESSASSSPQEANVANKGKIVKLVRVQGIEVDM 349

Query: 181 QIPFSWVVNNLMNPEYFLHICVFVSVQ 199
            IPF WV NNL NPE +LHICV+V  +
Sbjct: 350 DIPFLWVANNLKNPECYLHICVYVGTR 372

[Close]
BLAST of Cucsa.108740 vs. TrEMBL
Match: A0A0A0L933_CUCSA (Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197940 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-106
Identity = 195/198 (98.48%), Postives = 195/198 (98.48%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT   GRIPVRLYVRN
Sbjct: 53  DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT---GRIPVRLYVRN 112

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 120
           LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES
Sbjct: 113 LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 172

Query: 121 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 180
           TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN
Sbjct: 173 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 232

Query: 181 NLMNPEYFLHICVFVSVQ 199
           NLMNPEYFLHICVFVSVQ
Sbjct: 233 NLMNPEYFLHICVFVSVQ 247

[Close]
BLAST of Cucsa.108740 vs. TrEMBL
Match: F6HT40_VITVI (Autophagy protein 5 OS=Vitis vinifera GN=VIT_02s0012g02270 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-45
Identity = 108/205 (52.68%), Postives = 135/205 (65.85%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           ++EAY R+SSKLKL   G ++V K  S       +TGE D    +    GRIPVRLYV +
Sbjct: 165 NMEAYQRVSSKLKLEKVGDQYVGKPNSNLLKSRTNTGETDTGGPVKT--GRIPVRLYVWS 224

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEI-REEGKCFTLHDAVRSLLPELFAEKGTTKEE 120
           +  DFD LEDAP +++WD +SY+NRPVEI REE KCFTL DAV++LLPELF EK    EE
Sbjct: 225 VSKDFDDLEDAPQIDSWDQISYMNRPVEIHREEDKCFTLRDAVKALLPELFVEKTLIDEE 284

Query: 121 STNVPSEGQSDS-TEQLDCTKTEEGGSNFSEEYFQSYHPS------IKLVRIQGIEPKGQ 180
            + +  E +S + ++    T+ EE       E  +   PS      +KLVRIQGIEPK +
Sbjct: 285 ISRIELEEESRAPSDDESNTRNEEDVEEKQRENVECCCPSDDAETKLKLVRIQGIEPKLE 344

Query: 181 IPFSWVVNNLMNPEYFLHICVFVSV 198
           IPFSWVVNNLMNPE+FLHICVFV V
Sbjct: 345 IPFSWVVNNLMNPEHFLHICVFVKV 367

[Close]
BLAST of Cucsa.108740 vs. TrEMBL
Match: V4RJI1_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-45
Identity = 102/198 (51.52%), Postives = 136/198 (68.69%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           +LEAYLR+SSKLKL     ++ +K ++++S   + TGE D A  +    GRIPVRLYV +
Sbjct: 162 NLEAYLRVSSKLKLVTVEDDYTVK-LNSSSKSQQGTGETDFAGQVKT--GRIPVRLYVWS 221

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIR-EEGKCFTLHDAVRSLLPELFAEKGTTKEE 120
           + +DFD LEDAP ++ WD +S+INRPVE+R EEGKCFTLHDA+++LLPE F +K    +E
Sbjct: 222 VSEDFDDLEDAPDIDCWDKISFINRPVEVRTEEGKCFTLHDAIKTLLPEYFTDKPLFNDE 281

Query: 121 STNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVV 180
           S  +  E  + S+E     K  E      E   ++    IKLVRIQGIEPK +IPFSWVV
Sbjct: 282 SPKLEDEEMNLSSEDAGSNKNTEVEEILYEHVTRN--AEIKLVRIQGIEPKLEIPFSWVV 341

Query: 181 NNLMNPEYFLHICVFVSV 198
           NNLMNP+YFL++C+ V V
Sbjct: 342 NNLMNPDYFLYMCICVRV 354

[Close]
BLAST of Cucsa.108740 vs. TrEMBL
Match: V4U4U7_9ROSI (Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-45
Identity = 102/198 (51.52%), Postives = 136/198 (68.69%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           +LEAYLR+SSKLKL     ++ +K ++++S   + TGE D A  +    GRIPVRLYV +
Sbjct: 160 NLEAYLRVSSKLKLVTVEDDYTVK-LNSSSKSQQGTGETDFAGQVKT--GRIPVRLYVWS 219

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIR-EEGKCFTLHDAVRSLLPELFAEKGTTKEE 120
           + +DFD LEDAP ++ WD +S+INRPVE+R EEGKCFTLHDA+++LLPE F +K    +E
Sbjct: 220 VSEDFDDLEDAPDIDCWDKISFINRPVEVRTEEGKCFTLHDAIKTLLPEYFTDKPLFNDE 279

Query: 121 STNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVV 180
           S  +  E  + S+E     K  E      E   ++    IKLVRIQGIEPK +IPFSWVV
Sbjct: 280 SPKLEDEEMNLSSEDAGSNKNTEVEEILYEHVTRN--AEIKLVRIQGIEPKLEIPFSWVV 339

Query: 181 NNLMNPEYFLHICVFVSV 198
           NNLMNP+YFL++C+ V V
Sbjct: 340 NNLMNPDYFLYMCICVRV 352

[Close]
BLAST of Cucsa.108740 vs. TrEMBL
Match: M5XBI8_PRUPE (Autophagy protein 5 OS=Prunus persica GN=PRUPE_ppa007660mg PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.1e-45
Identity = 106/204 (51.96%), Postives = 132/204 (64.71%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           +LE Y R+S+KLKLG  G E+  K           +GE D +  + A  GR+PVRLYV +
Sbjct: 160 NLEPYRRVSTKLKLGTVGDEYAAK--------LNLSGETDFSGQVKA--GRVPVRLYVWS 219

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIR--EEGKCFTLHDAVRSLLPELFAEKGTTKE 120
           + +DF+ LEDAP +++WD VSYINRPVEI+  E G+CFTLHDAV+SLLPE F +K  T E
Sbjct: 220 VSEDFEDLEDAPQIDSWDKVSYINRPVEIQGGEGGRCFTLHDAVKSLLPEYFLDKSLTNE 279

Query: 121 ESTNVPSEGQS--DSTEQLDCTKTEEGGSNFSEEYFQSYH---PSIKLVRIQGIEPKGQI 180
           ES  V  E +    S +     K EE   N SE     Y     +IKLVRIQGI PK +I
Sbjct: 280 ESLTVGDEHEQRVSSEDASSDRKAEEEVENSSEHITSCYQHDDAAIKLVRIQGIHPKLEI 339

Query: 181 PFSWVVNNLMNPEYFLHICVFVSV 198
           PFSWV NNLMNPE+FLHICV++ V
Sbjct: 340 PFSWVANNLMNPEHFLHICVYLKV 353

[Close]
BLAST of Cucsa.108740 vs. TAIR10
Match: AT5G17290.1 (AT5G17290.1 autophagy protein Apg5 family)

HSP 1 Score: 167.5 bits (423), Expect = 8.1e-42
Identity = 96/197 (48.73%), Postives = 125/197 (63.45%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIA-QLITACPGRIPVRLYVR 60
           DL+AY R+S KLK+G    E   K+  ++    +   E ++A Q+ TA   RIPVRLYVR
Sbjct: 160 DLDAYTRLSPKLKMGTVEDEFSRKTSLSSPQSQQVVPETEVAGQVKTA---RIPVRLYVR 219

Query: 61  NLGDDFDHLEDAPPVNNWDDVSYINRPVE-IREEGKCFTLHDAVRSLLPELFAEKGTTKE 120
           +L  DF++LED P ++ WDD+SY+NRPVE ++EEGKCFTL DA++SLLPE   ++  T  
Sbjct: 220 SLNKDFENLEDVPEIDTWDDISYLNRPVEFLKEEGKCFTLRDAIKSLLPEFMGDRAQTSG 279

Query: 121 ESTNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWV 180
           E  ++      D TE+ D      G     E         IKLVRIQGIE K +IPFSWV
Sbjct: 280 EERSI------DDTEEAD------GSREMGE---------IKLVRIQGIEMKLEIPFSWV 332

Query: 181 VNNLMNPEYFLHICVFV 196
           VNNLMNPE++LHI V V
Sbjct: 340 VNNLMNPEFYLHISVLV 332

[Close]
BLAST of Cucsa.108740 vs. NCBI nr
Match: gi|449446111|ref|XP_004140815.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 2.6e-106
Identity = 195/198 (98.48%), Postives = 195/198 (98.48%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT   GRIPVRLYVRN
Sbjct: 158 DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT---GRIPVRLYVRN 217

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 120
           LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES
Sbjct: 218 LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 277

Query: 121 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 180
           TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN
Sbjct: 278 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 337

Query: 181 NLMNPEYFLHICVFVSVQ 199
           NLMNPEYFLHICVFVSVQ
Sbjct: 338 NLMNPEYFLHICVFVSVQ 352

[Close]
BLAST of Cucsa.108740 vs. NCBI nr
Match: gi|778679952|ref|XP_011651221.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 2.6e-106
Identity = 195/198 (98.48%), Postives = 195/198 (98.48%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT   GRIPVRLYVRN
Sbjct: 128 DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT---GRIPVRLYVRN 187

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 120
           LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES
Sbjct: 188 LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 247

Query: 121 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 180
           TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN
Sbjct: 248 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 307

Query: 181 NLMNPEYFLHICVFVSVQ 199
           NLMNPEYFLHICVFVSVQ
Sbjct: 308 NLMNPEYFLHICVFVSVQ 322

[Close]
BLAST of Cucsa.108740 vs. NCBI nr
Match: gi|700202346|gb|KGN57479.1| (hypothetical protein Csa_3G197940 [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 2.6e-106
Identity = 195/198 (98.48%), Postives = 195/198 (98.48%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLITACPGRIPVRLYVRN 60
           DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT   GRIPVRLYVRN
Sbjct: 53  DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIAQLIT---GRIPVRLYVRN 112

Query: 61  LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 120
           LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES
Sbjct: 113 LGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEES 172

Query: 121 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 180
           TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN
Sbjct: 173 TNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVVN 232

Query: 181 NLMNPEYFLHICVFVSVQ 199
           NLMNPEYFLHICVFVSVQ
Sbjct: 233 NLMNPEYFLHICVFVSVQ 247

[Close]
BLAST of Cucsa.108740 vs. NCBI nr
Match: gi|659112388|ref|XP_008456194.1| (PREDICTED: autophagy protein 5 isoform X2 [Cucumis melo])

HSP 1 Score: 344.0 bits (881), Expect = 1.8e-91
Identity = 177/196 (90.31%), Postives = 181/196 (92.35%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIA-QLITACPGRIPVRLYVR 60
           DLEAYLRISSKLKLGGTG EHVLKSIS ASLPAKS+GEMDIA QLIT   GRIPVRLYVR
Sbjct: 128 DLEAYLRISSKLKLGGTGLEHVLKSISAASLPAKSSGEMDIAGQLIT---GRIPVRLYVR 187

Query: 61  NLGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEE 120
           NLGDDFD+LEDAPPVNNWDDVSYINRPVEI+EEGKCFTLHDAVRSLLPELF EK TTK+E
Sbjct: 188 NLGDDFDNLEDAPPVNNWDDVSYINRPVEIQEEGKCFTLHDAVRSLLPELFTEKATTKDE 247

Query: 121 STNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVV 180
           STNV  E QSDSTEQLDCTKT EGGS  SEEY QSYHPSIKLVRIQGIEPKGQIPFSWVV
Sbjct: 248 STNVIGEEQSDSTEQLDCTKT-EGGSTSSEEYLQSYHPSIKLVRIQGIEPKGQIPFSWVV 307

Query: 181 NNLMNPEYFLHICVFV 196
           NNLMNPEYFLHICVFV
Sbjct: 308 NNLMNPEYFLHICVFV 319

[Close]
BLAST of Cucsa.108740 vs. NCBI nr
Match: gi|659112386|ref|XP_008456193.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 344.0 bits (881), Expect = 1.8e-91
Identity = 177/196 (90.31%), Postives = 181/196 (92.35%), Query Frame = 1 

Query: 1   DLEAYLRISSKLKLGGTGHEHVLKSISTASLPAKSTGEMDIA-QLITACPGRIPVRLYVR 60
           DLEAYLRISSKLKLGGTG EHVLKSIS ASLPAKS+GEMDIA QLIT   GRIPVRLYVR
Sbjct: 158 DLEAYLRISSKLKLGGTGLEHVLKSISAASLPAKSSGEMDIAGQLIT---GRIPVRLYVR 217

Query: 61  NLGDDFDHLEDAPPVNNWDDVSYINRPVEIREEGKCFTLHDAVRSLLPELFAEKGTTKEE 120
           NLGDDFD+LEDAPPVNNWDDVSYINRPVEI+EEGKCFTLHDAVRSLLPELF EK TTK+E
Sbjct: 218 NLGDDFDNLEDAPPVNNWDDVSYINRPVEIQEEGKCFTLHDAVRSLLPELFTEKATTKDE 277

Query: 121 STNVPSEGQSDSTEQLDCTKTEEGGSNFSEEYFQSYHPSIKLVRIQGIEPKGQIPFSWVV 180
           STNV  E QSDSTEQLDCTKT EGGS  SEEY QSYHPSIKLVRIQGIEPKGQIPFSWVV
Sbjct: 278 STNVIGEEQSDSTEQLDCTKT-EGGSTSSEEYLQSYHPSIKLVRIQGIEPKGQIPFSWVV 337

Query: 181 NNLMNPEYFLHICVFV 196
           NNLMNPEYFLHICVFV
Sbjct: 338 NNLMNPEYFLHICVFV 349

The following BLAST results are available for this feature:
BLAST of Cucsa.108740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATG5_ARATH1.4e-4048.73Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1[more]
ATG5_ORYSI1.0e-3038.65Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2[more]
ATG5_ORYSJ1.0e-3038.65Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1[more]
BLAST of Cucsa.108740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L933_CUCSA1.8e-10698.48Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197940 PE=3 SV=1[more]
F6HT40_VITVI1.8e-4552.68Autophagy protein 5 OS=Vitis vinifera GN=VIT_02s0012g02270 PE=3 SV=1[more]
V4RJI1_9ROSI5.1e-4551.52Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1[more]
V4U4U7_9ROSI5.1e-4551.52Autophagy protein 5 OS=Citrus clementina GN=CICLE_v10005246mg PE=3 SV=1[more]
M5XBI8_PRUPE5.1e-4551.96Autophagy protein 5 OS=Prunus persica GN=PRUPE_ppa007660mg PE=3 SV=1[more]
BLAST of Cucsa.108740 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G17290.18.1e-4248.73 autophagy protein Apg5 family[more]
BLAST of Cucsa.108740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449446111|ref|XP_004140815.1|2.6e-10698.48PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus][more]
gi|778679952|ref|XP_011651221.1|2.6e-10698.48PREDICTED: autophagy protein 5 isoform X2 [Cucumis sativus][more]
gi|700202346|gb|KGN57479.1|2.6e-10698.48hypothetical protein Csa_3G197940 [Cucumis sativus][more]
gi|659112388|ref|XP_008456194.1|1.8e-9190.31PREDICTED: autophagy protein 5 isoform X2 [Cucumis melo][more]
gi|659112386|ref|XP_008456193.1|1.8e-9190.31PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007239Atg5
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006914 autophagy
biological_process GO:0006810 transport
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.108740.1Cucsa.108740.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007239Autophagy-related protein 5PANTHERPTHR13040AUTOPHAGY PROTEIN 5coord: 1..197
score: 1.2
IPR007239Autophagy-related protein 5PFAMPF04106APG5coord: 1..193
score: 5.1
NoneNo IPR availablePANTHERPTHR13040:SF2AUTOPHAGY PROTEIN 5coord: 1..197
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.108740Cla013118Watermelon (97103) v1cgywmB153
Cucsa.108740Csa3G197940Cucumber (Chinese Long) v2cgycuB132
Cucsa.108740CSPI03G17950Wild cucumber (PI 183967)cgycpiB133
Cucsa.108740Lsi05G002590Bottle gourd (USVL1VR-Ls)cgylsiB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.108740Melon (DHL92) v3.6.1cgymedB144
Cucsa.108740Silver-seed gourdcarcgyB0216
Cucsa.108740Silver-seed gourdcarcgyB0856
Cucsa.108740Cucumber (Chinese Long) v3cgycucB137
Cucsa.108740Watermelon (97103) v2cgywmbB148
Cucsa.108740Wax gourdcgywgoB171
Cucsa.108740Cucurbita maxima (Rimu)cgycmaB0247
Cucsa.108740Cucurbita maxima (Rimu)cgycmaB0250
Cucsa.108740Cucurbita moschata (Rifu)cgycmoB0246
Cucsa.108740Cucurbita moschata (Rifu)cgycmoB0249
Cucsa.108740Melon (DHL92) v3.5.1cgymeB144
Cucsa.108740Watermelon (Charleston Gray)cgywcgB153
Cucsa.108740Cucurbita pepo (Zucchini)cgycpeB0242
Cucsa.108740Cucurbita pepo (Zucchini)cgycpeB0243