Cucsa.105870 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.105870
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionZinc finger protein, putative
Locationscaffold00929 : 329473 .. 330055 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTCAAACACGAATTTGGGTGGGGGTTTGATGCAAGAAGAAGAAGAAGAACCGAACCTTATTGATTTTTTCTATGCTGATAATTTACCAAATGGCAGTTTTTATGAAGGTGTAGAAGCAGCCGCTAGGCCTCGAGTTTTCTCGTGCAATTATTGCCCGCGGAAGTTCGTTAGTTCCCAGTCGCTTGGTGGCCACCAAAATGCTCACAGTCGAGAGAGAAAAATAGCTAAAACAGGCAATAAAATGGTTACTAATTCAACTGCGTGCAAATACTCAAAATCACTTGGAATTCAAGCACGTTCAATGATTCACAAGCCTTTTTCCCATTCATCTGTTTTTGGGTCCTTCCATCCTTTTCAGCTTGAGGCTAAGAGCAGGCAGTTTCTTTACGAGCAAGTGGCAGCTGGCCAATGGCCCTCACAGAAGAATTATCTGTCGAGGACCTCACCGGTACCGCCTTCAACCAGCGGAGCAACGAGTTGTGCTGGTTGGACGTTGAATAATGACTCATTATTGGATTCAAAGCGTACTTGTAATGAATTACACAAGCTAGATTGTTTAGACTTGTCTTTGAAGCTGTAA

mRNA sequence

GCTCTCAAACACGAATTTGGGTGGGGGTTTGATGCAAGAAGAAGAAGAAGAACCGAACCTTATTGATTTTTTCTATGCTGATAATTTACCAAATGGCAGTTTTTATGAAGGTGTAGAAGCAGCCGCTAGGCCTCGAGTTTTCTCGTGCAATTATTGCCCGCGGAAGTTCGTTAGTTCCCAGTCGCTTGGTGGCCACCAAAATGCTCACAGTCGAGAGAGAAAAATAGCTAAAACAGGCAATAAAATGGTTACTAATTCAACTGCGTGCAAATACTCAAAATCACTTGGAATTCAAGCACGTTCAATGATTCACAAGCCTTTTTCCCATTCATCTGTTTTTGGGTCCTTCCATCCTTTTCAGCTTGAGGCTAAGAGCAGGCAGTTTCTTTACGAGCAAGTGGCAGCTGGCCAATGGCCCTCACAGAAGAATTATCTGTCGAGGACCTCACCGGTACCGCCTTCAACCAGCGGAGCAACGAGTTGTGCTGGTTGGACGTTGAATAATGACTCATTATTGGATTCAAAGCGTACTTGTAATGAATTACACAAGCTAGATTGTTTAGACTTGTCTTTGAAGCTGTAA

Coding sequence (CDS)

GCTCTCAAACACGAATTTGGGTGGGGGTTTGATGCAAGAAGAAGAAGAAGAACCGAACCTTATTGATTTTTTCTATGCTGATAATTTACCAAATGGCAGTTTTTATGAAGGTGTAGAAGCAGCCGCTAGGCCTCGAGTTTTCTCGTGCAATTATTGCCCGCGGAAGTTCGTTAGTTCCCAGTCGCTTGGTGGCCACCAAAATGCTCACAGTCGAGAGAGAAAAATAGCTAAAACAGGCAATAAAATGGTTACTAATTCAACTGCGTGCAAATACTCAAAATCACTTGGAATTCAAGCACGTTCAATGATTCACAAGCCTTTTTCCCATTCATCTGTTTTTGGGTCCTTCCATCCTTTTCAGCTTGAGGCTAAGAGCAGGCAGTTTCTTTACGAGCAAGTGGCAGCTGGCCAATGGCCCTCACAGAAGAATTATCTGTCGAGGACCTCACCGGTACCGCCTTCAACCAGCGGAGCAACGAGTTGTGCTGGTTGGACGTTGAATAATGACTCATTATTGGATTCAAAGCGTACTTGTAATGAATTACACAAGCTAGATTGTTTAGACTTGTCTTTGAAGCTGTAA

Protein sequence

LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNELHKLDCLDLSLKL*
Homology
[Close]
BLAST of Cucsa.105870 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 1 

Query: 41  AARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACKY--------- 100
           +   ++FSCNYC R F SSQ+LGGHQNAH RER +AK G +M  +++A  +         
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPF 114

Query: 101 ------SKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNY- 160
                  +SLGIQA S+ HK  S++   G +        SR    +Q A G++PS  N+ 
Sbjct: 115 HGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQINW---SRLPFDQQPAIGKFPSMDNFH 174

Query: 161 --LSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNELH-------------KLDCLDL 194
               +   + PS +  ++      N   +L+   T  + H             +   LDL
Sbjct: 175 HHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQKLDL 234

[Close]
BLAST of Cucsa.105870 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.4e-13
Identity = 40/72 (55.56%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F   +          E  A PRVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 77  KTGN--KMVTNS 87
           K G   KM  +S
Sbjct: 98  KRGQYYKMTLSS 109

[Close]
BLAST of Cucsa.105870 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.0e-11
Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 1 

Query: 36  EGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAK----TGNKMVTNSTACKY 95
           +  +  A PRVFSCNYC RKF SSQ+LGGHQNAH RER +AK     G     +     Y
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTY 107

Query: 96  -SKSLGIQARS-MIH----------KPFSHSSVFGSFHP 119
            S SLG+QA S ++H            F H   FG+  P
Sbjct: 108 TSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVP 146

[Close]
BLAST of Cucsa.105870 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1 

Query: 43 RPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNS 87
          +PRVFSCNYC RKF SSQ+LGGHQNAH  ER +AK   ++  +S
Sbjct: 48 QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSS 91

[Close]
BLAST of Cucsa.105870 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-09
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 1 

Query: 45  RVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKM 83
           RVFSCNYC RKF SSQ+LGGHQNAH RER +AK   +M
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRM 120

[Close]
BLAST of Cucsa.105870 vs. TrEMBL
Match: A0A0A0K8M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 9.2e-108
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1 

Query: 1   LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ 60
           LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ
Sbjct: 37  LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ 96

Query: 61  SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ 120
           SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ
Sbjct: 97  SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ 156

Query: 121 LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNE 180
           LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDS RTCNE
Sbjct: 157 LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSNRTCNE 216

Query: 181 LHKLDCLDLSLKL 194
           LHKLDCLDLSLKL
Sbjct: 217 LHKLDCLDLSLKL 229

[Close]
BLAST of Cucsa.105870 vs. TrEMBL
Match: G7JD88_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_4g006575 PE=4 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17
Identity = 77/196 (39.29%), Postives = 96/196 (48.98%), Query Frame = 1 

Query: 13  EEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRE 72
           + + E NL++ F+A NL   S     E    PRVFSCNYC RKF SSQ+LGGHQNAH RE
Sbjct: 36  DSKSELNLLNCFHA-NLSESSSESSHENELDPRVFSCNYCQRKFYSSQALGGHQNAHKRE 95

Query: 73  RKIAKTGNKMVTNSTACKY---SKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFL 132
           R +A+ G      S+   Y   +KSLGIQ  SMI+KP   + +FG F         RQ  
Sbjct: 96  RTLARRGYTTSMASSLPSYGLCNKSLGIQVHSMINKPSYQTPLFG-FCSNGQNGWRRQNF 155

Query: 133 YEQVAAGQWP------------SQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRT 192
             Q A G+ P            S    +SR +  P   +          +N S L SK+ 
Sbjct: 156 DSQPAIGKLPLGNFHVRDEVESSFGGGISRVAMFPKRLANEGLGGYLFDSNTSHLQSKQ- 215

Query: 193 CNELHKLDCLDLSLKL 194
                KL  LDLSLKL
Sbjct: 216 ----EKLQKLDLSLKL 224

[Close]
BLAST of Cucsa.105870 vs. TrEMBL
Match: A0A0A0KVN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-17
Identity = 68/162 (41.98%), Postives = 85/162 (52.47%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F A NL      E  +    PRVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 60  ELNLIDCFDA-NLAT----EPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 119

Query: 77  KTGNKMVTNST---ACKYS------------KSLGIQARSMIHKPFSHSSVFGSFHPFQL 136
           K   ++ + S    A +YS            +SLGIQA SM+HKP  H S  GS   +  
Sbjct: 120 KRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGH 179

Query: 137 EAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAG 164
              SRQ L +  A G+     +++     +  ST+GA    G
Sbjct: 180 SGWSRQPLDQHPAIGRLMQGNSHVGSHRGI-SSTTGAARFEG 215

[Close]
BLAST of Cucsa.105870 vs. TrEMBL
Match: B9SMU5_RICCO (Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0470980 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-16
Identity = 67/168 (39.88%), Postives = 86/168 (51.19%), Query Frame = 1 

Query: 12  QEEEEEPNLIDFF--------YADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLG 71
           ++ + E NLID F         +DN   G+  E       PRVFSCNYC RKF SSQ+LG
Sbjct: 72  KDSKAELNLIDTFDLGPSQKSLSDNPHQGNETE-------PRVFSCNYCQRKFYSSQALG 131

Query: 72  GHQNAHSRERKIAKTGNKMVTNSTAC---------KYS------------KSLGIQARSM 131
           GHQNAH RER +AK G ++   S A          +YS            +SLGIQ  SM
Sbjct: 132 GHQNAHKRERTLAKRGQRISAASFALGHHHHSHLNRYSSMASLPLHGSLNRSLGIQVHSM 191

Query: 132 IHKP-FSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSRTS 150
           IHKP F  SS+ GS + +     SRQ   +Q A G+  S+  ++   S
Sbjct: 192 IHKPTFIQSSILGSSNLYGQNGWSRQPFDQQPAVGRLASESFHMGSPS 232

[Close]
BLAST of Cucsa.105870 vs. TrEMBL
Match: B9IL36_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s02320g PE=4 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 6.4e-16
Identity = 66/199 (33.17%), Postives = 91/199 (45.73%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F + +    S           RVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 62  ELNLIDNFRSMDSSETSPETPQGTDGEQRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 121

Query: 77  KTGNKMVTNSTACK----------------------YSKSLGIQARSMIHKPFSHSSVFG 136
           K G +++ +                           + +SLGIQ  SMIHKP   SS  G
Sbjct: 122 KRGQRLIRSQLEASMAAYGHPYFHHHHHSSMASLPLHGRSLGIQVHSMIHKPSHLSSSTG 181

Query: 137 SFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDS 194
             + +   + SR  + +Q   G+   +  Y++ T+P   S            N +   + 
Sbjct: 182 FGNVYGHGSWSRPHIDQQPGIGKLSMENFYMNATTPSRASVG--------RFNLERTSNG 241

[Close]
BLAST of Cucsa.105870 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 81.6 bits (200), Expect = 5.7e-16
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 1 

Query: 41  AARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACKY--------- 100
           +   ++FSCNYC R F SSQ+LGGHQNAH RER +AK G +M  +++A  +         
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPF 114

Query: 101 ------SKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNY- 160
                  +SLGIQA S+ HK  S++   G +        SR    +Q A G++PS  N+ 
Sbjct: 115 HGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQINW---SRLPFDQQPAIGKFPSMDNFH 174

Query: 161 --LSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNELH-------------KLDCLDL 194
               +   + PS +  ++      N   +L+   T  + H             +   LDL
Sbjct: 175 HHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEEQQKLDL 234

[Close]
BLAST of Cucsa.105870 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 4.8e-15
Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 1 

Query: 41  AARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNST------------A 100
           +   ++FSCNYC R F SSQ+LGGHQNAH RER +AK G +M + +              
Sbjct: 98  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFH 157

Query: 101 CKYS-KSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSR 157
            +YS ++LGIQA SM HKP S++   G +        SR  L +Q A  +  S +N+ + 
Sbjct: 158 GQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQINW---SRIPLVQQPAIAKLTSTENHYNH 217

[Close]
BLAST of Cucsa.105870 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 75.1 bits (183), Expect = 5.3e-14
Identity = 40/72 (55.56%), Postives = 44/72 (61.11%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F   +          E  A PRVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 38  ELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 97

Query: 77  KTGN--KMVTNS 87
           K G   KM  +S
Sbjct: 98  KRGQYYKMTLSS 109

[Close]
BLAST of Cucsa.105870 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 44/99 (44.44%), Postives = 53/99 (53.54%), Query Frame = 1 

Query: 36  EGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAK----TGNKMVTNSTACKY 95
           +  +  A PRVFSCNYC RKF SSQ+LGGHQNAH RER +AK     G     +     Y
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTY 107

Query: 96  -SKSLGIQARS-MIH----------KPFSHSSVFGSFHP 119
            S SLG+QA S ++H            F H   FG+  P
Sbjct: 108 TSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVP 146

[Close]
BLAST of Cucsa.105870 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 64.7 bits (156), Expect = 7.2e-11
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1 

Query: 43 RPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNS 87
          +PRVFSCNYC RKF SSQ+LGGHQNAH  ER +AK   ++  +S
Sbjct: 48 QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSS 91

[Close]
BLAST of Cucsa.105870 vs. NCBI nr
Match: gi|778730464|ref|XP_011659788.1| (PREDICTED: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 1.3e-107
Identity = 192/193 (99.48%), Postives = 192/193 (99.48%), Query Frame = 1 

Query: 1   LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ 60
           LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ
Sbjct: 37  LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ 96

Query: 61  SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ 120
           SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ
Sbjct: 97  SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ 156

Query: 121 LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNE 180
           LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDS RTCNE
Sbjct: 157 LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSNRTCNE 216

Query: 181 LHKLDCLDLSLKL 194
           LHKLDCLDLSLKL
Sbjct: 217 LHKLDCLDLSLKL 229

[Close]
BLAST of Cucsa.105870 vs. NCBI nr
Match: gi|659122986|ref|XP_008461428.1| (PREDICTED: zinc finger protein 1-like [Cucumis melo])

HSP 1 Score: 358.6 bits (919), Expect = 6.8e-96
Identity = 178/193 (92.23%), Postives = 184/193 (95.34%), Query Frame = 1 

Query: 1   LSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQ 60
           LSNTNLGGGL QEEEE PNLIDFF ADNLPNGS YEGVEAAARPRVFSCNYCPRKFVSSQ
Sbjct: 38  LSNTNLGGGLTQEEEE-PNLIDFFDADNLPNGSSYEGVEAAARPRVFSCNYCPRKFVSSQ 97

Query: 61  SLGGHQNAHSRERKIAKTGNKMVTNSTACKYSKSLGIQARSMIHKPFSHSSVFGSFHPFQ 120
           SLGGHQNAHSRERK+AKT +KMVTNST CKYSKSLGIQARSMIHKPFS+S VFGSFHPFQ
Sbjct: 98  SLGGHQNAHSRERKMAKTSSKMVTNSTGCKYSKSLGIQARSMIHKPFSYSPVFGSFHPFQ 157

Query: 121 LEAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRTCNE 180
           LEAK+RQ LYEQ+AAGQWPS+KNYLSRTSPVPPSTSGATSCAGWTL NDSLLDSKRTCNE
Sbjct: 158 LEAKNRQSLYEQLAAGQWPSKKNYLSRTSPVPPSTSGATSCAGWTL-NDSLLDSKRTCNE 217

Query: 181 LHKLDCLDLSLKL 194
           LHKLDCLDLSLKL
Sbjct: 218 LHKLDCLDLSLKL 228

[Close]
BLAST of Cucsa.105870 vs. NCBI nr
Match: gi|922362048|ref|XP_003604205.2| (zinc finger-like protein [Medicago truncatula])

HSP 1 Score: 97.1 bits (240), Expect = 3.7e-17
Identity = 77/196 (39.29%), Postives = 96/196 (48.98%), Query Frame = 1 

Query: 13  EEEEEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRE 72
           + + E NL++ F+A NL   S     E    PRVFSCNYC RKF SSQ+LGGHQNAH RE
Sbjct: 36  DSKSELNLLNCFHA-NLSESSSESSHENELDPRVFSCNYCQRKFYSSQALGGHQNAHKRE 95

Query: 73  RKIAKTGNKMVTNSTACKY---SKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFL 132
           R +A+ G      S+   Y   +KSLGIQ  SMI+KP   + +FG F         RQ  
Sbjct: 96  RTLARRGYTTSMASSLPSYGLCNKSLGIQVHSMINKPSYQTPLFG-FCSNGQNGWRRQNF 155

Query: 133 YEQVAAGQWP------------SQKNYLSRTSPVPPSTSGATSCAGWTLNNDSLLDSKRT 192
             Q A G+ P            S    +SR +  P   +          +N S L SK+ 
Sbjct: 156 DSQPAIGKLPLGNFHVRDEVESSFGGGISRVAMFPKRLANEGLGGYLFDSNTSHLQSKQ- 215

Query: 193 CNELHKLDCLDLSLKL 194
                KL  LDLSLKL
Sbjct: 216 ----EKLQKLDLSLKL 224

[Close]
BLAST of Cucsa.105870 vs. NCBI nr
Match: gi|778689686|ref|XP_004152329.2| (PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17
Identity = 68/162 (41.98%), Postives = 85/162 (52.47%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F A NL      E  +    PRVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 60  ELNLIDCFDA-NLAT----EPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 119

Query: 77  KTGNKMVTNST---ACKYS------------KSLGIQARSMIHKPFSHSSVFGSFHPFQL 136
           K   ++ + S    A +YS            +SLGIQA SM+HKP  H S  GS   +  
Sbjct: 120 KRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGH 179

Query: 137 EAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAG 164
              SRQ L +  A G+     +++     +  ST+GA    G
Sbjct: 180 SGWSRQPLDQHPAIGRLMQGNSHVGSHRGI-SSTTGAARFEG 215

[Close]
BLAST of Cucsa.105870 vs. NCBI nr
Match: gi|700197786|gb|KGN52944.1| (hypothetical protein Csa_4G006510 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 8.3e-17
Identity = 68/162 (41.98%), Postives = 85/162 (52.47%), Query Frame = 1 

Query: 17  EPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIA 76
           E NLID F A NL      E  +    PRVFSCNYC RKF SSQ+LGGHQNAH RER +A
Sbjct: 60  ELNLIDCFDA-NLAT----EPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA 119

Query: 77  KTGNKMVTNST---ACKYS------------KSLGIQARSMIHKPFSHSSVFGSFHPFQL 136
           K   ++ + S    A +YS            +SLGIQA SM+HKP  H S  GS   +  
Sbjct: 120 KRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGH 179

Query: 137 EAKSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSCAG 164
              SRQ L +  A G+     +++     +  ST+GA    G
Sbjct: 180 SGWSRQPLDQHPAIGRLMQGNSHVGSHRGI-SSTTGAARFEG 215

The following BLAST results are available for this feature:
BLAST of Cucsa.105870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP3_ARATH1.0e-1432.07Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP1_ARATH9.4e-1355.56Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP7_ARATH3.0e-1144.44Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP2_ARATH1.3e-0963.64Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
ZFP4_ARATH2.2e-0973.68Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
BLAST of Cucsa.105870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8M2_CUCSA9.2e-10899.48Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1[more]
G7JD88_MEDTR2.6e-1739.29Uncharacterized protein OS=Medicago truncatula GN=MTR_4g006575 PE=4 SV=2[more]
A0A0A0KVN7_CUCSA5.8e-1741.98Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1[more]
B9SMU5_RICCO1.3e-1639.88Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0470980 PE=4 SV=1[more]
B9IL36_POPTR6.4e-1633.17Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s02320g PE=4 SV=2[more]
BLAST of Cucsa.105870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25160.15.7e-1632.07 zinc finger protein 3[more]
AT5G10970.14.8e-1538.93 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G80730.15.3e-1455.56 zinc-finger protein 1[more]
AT1G24625.11.7e-1244.44 zinc finger protein 7[more]
AT5G57520.17.2e-1163.64 zinc finger protein 2[more]
BLAST of Cucsa.105870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730464|ref|XP_011659788.1|1.3e-10799.48PREDICTED: zinc finger protein 3-like [Cucumis sativus][more]
gi|659122986|ref|XP_008461428.1|6.8e-9692.23PREDICTED: zinc finger protein 1-like [Cucumis melo][more]
gi|922362048|ref|XP_003604205.2|3.7e-1739.29zinc finger-like protein [Medicago truncatula][more]
gi|778689686|ref|XP_004152329.2|8.3e-1741.98PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus][more]
gi|700197786|gb|KGN52944.1|8.3e-1741.98hypothetical protein Csa_4G006510 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.105870.1Cucsa.105870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 49..69
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 47..74
score: 12
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3DG3DSA:3.30.160.60coord: 45..73
score: 2.
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 44..74
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.105870Cla015329Watermelon (97103) v1cgywmB142
Cucsa.105870Csa7G432050Cucumber (Chinese Long) v2cgycuB126
Cucsa.105870MELO3C023462Melon (DHL92) v3.5.1cgymeB133
Cucsa.105870ClCG09G003270Watermelon (Charleston Gray)cgywcgB141
Cucsa.105870CSPI07G20170Wild cucumber (PI 183967)cgycpiB127
Cucsa.105870CmaCh17G008920Cucurbita maxima (Rimu)cgycmaB0237
Cucsa.105870CmaCh01G001760Cucurbita maxima (Rimu)cgycmaB0238
Cucsa.105870CmoCh01G001840Cucurbita moschata (Rifu)cgycmoB0238
Cucsa.105870CmoCh14G014200Cucurbita moschata (Rifu)cgycmoB0235
Cucsa.105870Lsi07G004080Bottle gourd (USVL1VR-Ls)cgylsiB136
Cucsa.105870Lsi04G020860Bottle gourd (USVL1VR-Ls)cgylsiB134
Cucsa.105870Lsi02G026710Bottle gourd (USVL1VR-Ls)cgylsiB133
Cucsa.105870Cp4.1LG12g07330Cucurbita pepo (Zucchini)cgycpeB0229
Cucsa.105870Cp4.1LG03g13450Cucurbita pepo (Zucchini)cgycpeB0234
Cucsa.105870MELO3C017834.2Melon (DHL92) v3.6.1cgymedB135
Cucsa.105870MELO3C016976.2Melon (DHL92) v3.6.1cgymedB134
Cucsa.105870MELO3C023462.2Melon (DHL92) v3.6.1cgymedB133
Cucsa.105870CsaV3_4G036740Cucumber (Chinese Long) v3cgycucB130
Cucsa.105870CsaV3_4G002030Cucumber (Chinese Long) v3cgycucB129
Cucsa.105870Cla97C09G165510Watermelon (97103) v2cgywmbB141
Cucsa.105870Cla97C05G097460Watermelon (97103) v2cgywmbB138
Cucsa.105870Bhi09G000427Wax gourdcgywgoB161
Cucsa.105870Carg13506Silver-seed gourdcarcgyB0520
Cucsa.105870Carg18739Silver-seed gourdcarcgyB0414
Cucsa.105870Carg27704Silver-seed gourdcarcgyB0227
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.105870Cucsa.095930Cucumber (Gy14) v1cgycgyB032
Cucsa.105870Cucsa.271680Cucumber (Gy14) v1cgycgyB054
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.105870Cucumber (Chinese Long) v3cgycucB131
Cucsa.105870Cucurbita maxima (Rimu)cgycmaB0241
Cucsa.105870Cucurbita moschata (Rifu)cgycmoB0236
Cucsa.105870Cucurbita moschata (Rifu)cgycmoB0240
Cucsa.105870Wild cucumber (PI 183967)cgycpiB126
Cucsa.105870Cucumber (Chinese Long) v2cgycuB125
Cucsa.105870Melon (DHL92) v3.5.1cgymeB134
Cucsa.105870Watermelon (Charleston Gray)cgywcgB143
Cucsa.105870Watermelon (97103) v1cgywmB144
Cucsa.105870Cucurbita pepo (Zucchini)cgycpeB0230