CmaCh17G008920 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G008920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger protein, putative
Location	Cma_Chr17 : 6776760 .. 6777449 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCCCTCGATCTAAGCCTCTCAAACAAGGATTTGGGCGGGAGTTTGCCAGAGGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACGACATTTCCTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCATTCATCCTTTTGAGCCTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCGGTTGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGAAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

mRNA sequence

ATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCCCTCGATCTAAGCCTCTCAAACAAGGATTTGGGCGGGAGTTTGCCAGAGGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACGACATTTCCTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCATTCATCCTTTTGAGCCTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCGGTTGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGAAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Coding sequence (CDS)

ATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCCCTCGATCTAAGCCTCTCAAACAAGGATTTGGGCGGGAGTTTGCCAGAGGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACGACATTTCCTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCATTCATCCTTTTGAGCCTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCGGTTGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGAAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Protein sequence

MDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNYRLGASPVLPSSSGAEGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL

Homology

[Close]

BLAST of CmaCh17G008920 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-18
Identity = 78/211 (36.97%), Postives = 103/211 (48.82%), Query Frame = 1


Query: 39  ELNLIDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKA 98
           ELNLID  C D+  + ++ E T  + + ++FSCN+C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVN-EST-TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 99  KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEP 158
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G       
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 159 EVWDRQPLYTQVATGKWPLSKNYR-------LGASPVLPSSSGAEGFDGGWRLSSNSDT- 218
             W R P   Q A GK+P   N+        + A  V   S+  +      R+   S T 
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTL 214

Query: 219 --------LLDSKRPHNELHKLDCLDLSLRL 230
                   LL S   H E  K   LDLSL+L
Sbjct: 215 EQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

[Close]

BLAST of CmaCh17G008920 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-17
Identity = 62/133 (46.62%), Postives = 72/133 (54.14%), Query Frame = 1


Query: 23  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQ 82
           L+L L+    G +   ELNLID F   +          E  A PRVFSCN+C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81

Query: 83  ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 140
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]

BLAST of CmaCh17G008920 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11
Identity = 68/210 (32.38%), Postives = 98/210 (46.67%), Query Frame = 1


Query: 28  SNKDLGGSLPEELNL-IDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQALGG 87
           SN+DL  S PE  ++ +D    D   +D   + T+  A PRVFSCN+C R+F SSQALGG
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT--KSTKCEANPRVFSCNYCRRKFYSSQALGG 80

Query: 88  HQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPFSHAPV 147
           HQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   S    
Sbjct: 81  HQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQP 140

Query: 148 FGSIHPFEPEVWDRQPLYTQVATGK----WPLS--KNYRLGASPVLPSSSGAEGFDGGWR 207
             S    +    +  PL+     G     WP S  +      +PV+  +S   G D    
Sbjct: 141 LVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN-S 200

Query: 208 LSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
           +++N     +S +P          DL+LRL
Sbjct: 201 VAANGGVDNNSSKP----------DLTLRL 209

[Close]

BLAST of CmaCh17G008920 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 46/144 (31.94%), Postives = 67/144 (46.53%), Query Frame = 1


Query: 14  KDISPELVSLDLSLSNKDLGGSLPEELNL-IDFFCADNLPNDISYEGTEAAAKPRVFSCN 73
           +D  P  ++L LS +N +      E  +L +         N    +  + +   RVFSCN
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 74  FCPREFLSSQALGGHQNAHNRKRKKAKPAHKL------------VTNSTDCKHSSVSSLP 133
           +C R+F SSQALGGHQNAH R+R  AK A ++               +     +++S LP
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 134 FQGFN-------RSLGIQMHSMIH 138
             G         R+LGI+ HS  H
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of CmaCh17G008920 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 32/68 (47.06%), Postives = 40/68 (58.82%), Query Frame = 1


Query: 56  SYEGTEAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSS 115
           S   +    +PRVFSCN+C R+F SSQALGGHQNAH  +R  AK + +L  +S      S
Sbjct: 39  STNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTV--DS 98

Query: 116 VSSLPFQG 124
               PF G
Sbjct: 99  DQPYPFSG 104

[Close]

BLAST of CmaCh17G008920 vs. TrEMBL
Match: A0A0A0K8M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-69
Identity = 145/229 (63.32%), Postives = 168/229 (73.36%), Query Frame = 1


Query: 5   PEVKDPSDSKDISPELVSLDLSLSNKDLGGSL----PEELNLIDFFCADNLPNDISYEGT 64
           P ++DP+DSKD SPELVSL+  LSN +LGG L     EE NLIDFF ADNLPN   YEG 
Sbjct: 15  PWLQDPNDSKDTSPELVSLEFRLSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGV 74

Query: 65  EAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLP 124
           EAAA+PRVFSCN+CPR+F+SSQ+LGGHQNAH+R+RK AK  +K+VTNST CK+S      
Sbjct: 75  EAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACKYS------ 134

Query: 125 FQGFNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNYRLG 184
                +SLGIQ  SMIHKPFSH+ VFGS HPF+ E   RQ LY QVA G+WP  KNY   
Sbjct: 135 -----KSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSR 194

Query: 185 ASPVLPSSSGAEGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
            SPV PS+SGA     GW L  N+D+LLDS R  NELHKLDCLDLSL+L
Sbjct: 195 TSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNELHKLDCLDLSLKL 229

[Close]

BLAST of CmaCh17G008920 vs. TrEMBL
Match: A0A0A0KVN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 9.1e-30
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 3   SPPEVKDPSDSKDISPEL-VSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTE 62
           SPP  K    +  I+P   + LDL+LSN D       ELNLID F A+     ++ E T+
Sbjct: 23  SPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPELNLIDCFDAN-----LATEPTD 82

Query: 63  AAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNST---DCKHSSVSS 122
              +PRVFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ + S      ++SS++S
Sbjct: 83  TETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLAS 142

Query: 123 LPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNY 182
           LP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G+  +  N 
Sbjct: 143 LPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQGNS 202

Query: 183 RLGASPVLPSSSGAEGFDGGWRLS 202
            +G+   + S++GA  F+G  R S
Sbjct: 203 HVGSHRGISSTTGAARFEGVKRFS 220

[Close]

BLAST of CmaCh17G008920 vs. TrEMBL
Match: A0A067DJC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 100/248 (40.32%), Postives = 131/248 (52.82%), Query Frame = 1


Query: 14  KDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCA-----DNLPN-DISYEGTEAAAKPR 73
           ++ +P LV LDLSLSNKD       ELNLID F +     D+L N DI  +G E   +PR
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNET--EPR 98

Query: 74  VFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNS----------------TDC 133
           VFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ T S                T  
Sbjct: 99  VFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHR 158

Query: 134 KHSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGK 193
            + S++SLP  G FNRSLGIQ+HSMIHKP        S + +    W RQP+  Q A GK
Sbjct: 159 SYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGK 218

Query: 194 WPLSKNYRLGASPVLPSSSGAEGFDGGWRLSSNS---------DTLLDSKRPHNELHKLD 230
               +N++  A+    S +G   F+   + S  +         D +   K   ++L K  
Sbjct: 219 LS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK-- 278

[Close]

BLAST of CmaCh17G008920 vs. TrEMBL
Match: V4S0F0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-28
Identity = 100/249 (40.16%), Postives = 131/249 (52.61%), Query Frame = 1


Query: 14  KDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCA-----DNLPN-DISYEGTEAAAKPR 73
           ++ +P LV LDLSLSNKD       ELNLID F +     D+L N DI  +G E   +PR
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPELNLIDCFKSTDSSQDSLENNDIHRQGNET--EPR 98

Query: 74  VFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNS-----------------TD 133
           VFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ T S                 T 
Sbjct: 99  VFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSSLAFGHHHNPNSYTH 158

Query: 134 CKHSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATG 193
             + S++SLP  G FNRSLGIQ+HSMIHKP        S + +    W RQP+  Q A G
Sbjct: 159 RSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIG 218

Query: 194 KWPLSKNYRLGASPVLPSSSGAEGFDGGWRLSSNS---------DTLLDSKRPHNELHKL 230
           K    +N++  A+    S +G   F+   + S  +         D +   K   ++L K 
Sbjct: 219 KLS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK- 278

[Close]

BLAST of CmaCh17G008920 vs. TrEMBL
Match: A0A061G9A1_THECC (Zinc finger protein, putative OS=Theobroma cacao GN=TCM_027404 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 99/253 (39.13%), Postives = 137/253 (54.15%), Query Frame = 1


Query: 5   PEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPE---ELNLIDFFCADNLPNDISYEGTE 64
           PE +D    +D++ +LV LDLSLS+KD   S PE   ELNLID F  D+  +  S E  +
Sbjct: 40  PEEEDHEHQQDVNYDLV-LDLSLSSKDDSNSNPELKPELNLIDCFKTDSSDDQDSLETPQ 99

Query: 65  A-AAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVT---------NSTDC 124
               +PRVFSCN+C R+F SSQALGGHQNAH R+R  AK   ++           N+   
Sbjct: 100 GNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRIGAASFAAFGHPNAHLS 159

Query: 125 KHSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGK 184
           ++SS++SLP  G FN+SLGIQ+HSMIHKP        S H +    W R+P+ ++ A G 
Sbjct: 160 RYSSMASLPLHGSFNKSLGIQVHSMIHKP----AFLPSAHIYGHNGWSRRPIDSKPAIGH 219

Query: 185 WPLSKNYRLGASPVLPSSSGA--------------EGFDGGWRLSSNSDTLLDSKRPHNE 230
             + K + +G +    +S+ A              EG  G W +    D++   K   +E
Sbjct: 220 LSMEK-FHVGINAGSSASNAAARFETSTRKLGPATEGMGGYWWV----DSVNHFKTKQDE 278

[Close]

BLAST of CmaCh17G008920 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 5.9e-20
Identity = 83/238 (34.87%), Postives = 115/238 (48.32%), Query Frame = 1


Query: 8   KDPSDSKDISPELVSLDLSLSNKDLGG-SLPEELNLIDFFCADNLPNDISYEGTEAAAKP 67
           +D  D K+   E + LDL L+  D     L +ELNL+D  C +      S+ G+  + + 
Sbjct: 46  EDDHDQKE-GVEGIKLDLMLAGYDSSQPQLNQELNLLD--CLETGVVTPSFNGS-TSTEQ 105

Query: 68  RVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQG--F 127
           ++FSCN+C R F SSQALGGHQNAH R+R  AK   ++ + +        + +PF G   
Sbjct: 106 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYS 165

Query: 128 NRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNY-----RL 187
           NR+LGIQ HSM HKP S+    G         W R PL  Q A  K   ++N+      +
Sbjct: 166 NRTLGIQAHSMSHKPSSYNVYGGEYGQIN---WSRIPLVQQPAIAKLTSTENHYNHHQMM 225

Query: 188 GASPVLPSSSGAEGFDGG--------WRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
            A P+  +      FD G          L    + LL   +P  E  K   LDLSL+L
Sbjct: 226 IAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELL---KPAEE-EKQKNLDLSLKL 272

[Close]

BLAST of CmaCh17G008920 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 78/211 (36.97%), Postives = 103/211 (48.82%), Query Frame = 1


Query: 39  ELNLIDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKA 98
           ELNLID  C D+  + ++ E T  + + ++FSCN+C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVN-EST-TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 99  KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEP 158
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G       
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 159 EVWDRQPLYTQVATGKWPLSKNYR-------LGASPVLPSSSGAEGFDGGWRLSSNSDT- 218
             W R P   Q A GK+P   N+        + A  V   S+  +      R+   S T 
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSPTL 214

Query: 219 --------LLDSKRPHNELHKLDCLDLSLRL 230
                   LL S   H E  K   LDLSL+L
Sbjct: 215 EQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

[Close]

BLAST of CmaCh17G008920 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-18
Identity = 62/133 (46.62%), Postives = 72/133 (54.14%), Query Frame = 1


Query: 23  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQ 82
           L+L L+    G +   ELNLID F   +          E  A PRVFSCN+C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81

Query: 83  ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 140
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]

BLAST of CmaCh17G008920 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-12
Identity = 68/210 (32.38%), Postives = 98/210 (46.67%), Query Frame = 1


Query: 28  SNKDLGGSLPEELNL-IDFFCADNLPNDISYEGTEAAAKPRVFSCNFCPREFLSSQALGG 87
           SN+DL  S PE  ++ +D    D   +D   + T+  A PRVFSCN+C R+F SSQALGG
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT--KSTKCEANPRVFSCNYCRRKFYSSQALGG 80

Query: 88  HQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPFSHAPV 147
           HQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   S    
Sbjct: 81  HQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQP 140

Query: 148 FGSIHPFEPEVWDRQPLYTQVATGK----WPLS--KNYRLGASPVLPSSSGAEGFDGGWR 207
             S    +    +  PL+     G     WP S  +      +PV+  +S   G D    
Sbjct: 141 LVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN-S 200

Query: 208 LSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
           +++N     +S +P          DL+LRL
Sbjct: 201 VAANGGVDNNSSKP----------DLTLRL 209

[Close]

BLAST of CmaCh17G008920 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 46/144 (31.94%), Postives = 67/144 (46.53%), Query Frame = 1


Query: 14  KDISPELVSLDLSLSNKDLGGSLPEELNL-IDFFCADNLPNDISYEGTEAAAKPRVFSCN 73
           +D  P  ++L LS +N +      E  +L +         N    +  + +   RVFSCN
Sbjct: 29  EDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCN 88

Query: 74  FCPREFLSSQALGGHQNAHNRKRKKAKPAHKL------------VTNSTDCKHSSVSSLP 133
           +C R+F SSQALGGHQNAH R+R  AK A ++               +     +++S LP
Sbjct: 89  YCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLP 148

Query: 134 FQGFN-------RSLGIQMHSMIH 138
             G         R+LGI+ HS  H
Sbjct: 149 LHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of CmaCh17G008920 vs. NCBI nr
Match: gi|659122986|ref|XP_008461428.1| (PREDICTED: zinc finger protein 1-like [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 2.6e-70
Identity = 145/226 (64.16%), Postives = 170/226 (75.22%), Query Frame = 1


Query: 7   VKDPSDSKDISPELVSLDLSLSNKDLGGSLP---EELNLIDFFCADNLPNDISYEGTEAA 66
           ++DP+DSKD SPELVSLD  LSN +LGG L    EE NLIDFF ADNLPN  SYEG EAA
Sbjct: 18  LQDPNDSKDTSPELVSLDFRLSNTNLGGGLTQEEEEPNLIDFFDADNLPNGSSYEGVEAA 77

Query: 67  AKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQG 126
           A+PRVFSCN+CPR+F+SSQ+LGGHQNAH+R+RK AK + K+VTNST CK+S         
Sbjct: 78  ARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKMAKTSSKMVTNSTGCKYS--------- 137

Query: 127 FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNYRLGASP 186
             +SLGIQ  SMIHKPFS++PVFGS HPF+ E  +RQ LY Q+A G+WP  KNY    SP
Sbjct: 138 --KSLGIQARSMIHKPFSYSPVFGSFHPFQLEAKNRQSLYEQLAAGQWPSKKNYLSRTSP 197

Query: 187 VLPSSSGAEGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
           V PS+SGA     GW L   +D+LLDSKR  NELHKLDCLDLSL+L
Sbjct: 198 VPPSTSGATSC-AGWTL---NDSLLDSKRTCNELHKLDCLDLSLKL 228

[Close]

BLAST of CmaCh17G008920 vs. NCBI nr
Match: gi|778730464|ref|XP_011659788.1| (PREDICTED: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 4.9e-69
Identity = 145/229 (63.32%), Postives = 168/229 (73.36%), Query Frame = 1


Query: 5   PEVKDPSDSKDISPELVSLDLSLSNKDLGGSL----PEELNLIDFFCADNLPNDISYEGT 64
           P ++DP+DSKD SPELVSL+  LSN +LGG L     EE NLIDFF ADNLPN   YEG 
Sbjct: 15  PWLQDPNDSKDTSPELVSLEFRLSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGV 74

Query: 65  EAAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLP 124
           EAAA+PRVFSCN+CPR+F+SSQ+LGGHQNAH+R+RK AK  +K+VTNST CK+S      
Sbjct: 75  EAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACKYS------ 134

Query: 125 FQGFNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNYRLG 184
                +SLGIQ  SMIHKPFSH+ VFGS HPF+ E   RQ LY QVA G+WP  KNY   
Sbjct: 135 -----KSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSR 194

Query: 185 ASPVLPSSSGAEGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230
            SPV PS+SGA     GW L  N+D+LLDS R  NELHKLDCLDLSL+L
Sbjct: 195 TSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNELHKLDCLDLSLKL 229

[Close]

BLAST of CmaCh17G008920 vs. NCBI nr
Match: gi|778689686|ref|XP_004152329.2| (PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 3   SPPEVKDPSDSKDISPEL-VSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTE 62
           SPP  K    +  I+P   + LDL+LSN D       ELNLID F A+     ++ E T+
Sbjct: 23  SPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPELNLIDCFDAN-----LATEPTD 82

Query: 63  AAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNST---DCKHSSVSS 122
              +PRVFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ + S      ++SS++S
Sbjct: 83  TETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLAS 142

Query: 123 LPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNY 182
           LP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G+  +  N 
Sbjct: 143 LPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQGNS 202

Query: 183 RLGASPVLPSSSGAEGFDGGWRLS 202
            +G+   + S++GA  F+G  R S
Sbjct: 203 HVGSHRGISSTTGAARFEGVKRFS 220

[Close]

BLAST of CmaCh17G008920 vs. NCBI nr
Match: gi|700197786|gb|KGN52944.1| (hypothetical protein Csa_4G006510 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 3   SPPEVKDPSDSKDISPEL-VSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTE 62
           SPP  K    +  I+P   + LDL+LSN D       ELNLID F A+     ++ E T+
Sbjct: 23  SPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPELNLIDCFDAN-----LATEPTD 82

Query: 63  AAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNST---DCKHSSVSS 122
              +PRVFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ + S      ++SS++S
Sbjct: 83  TETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLAS 142

Query: 123 LPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNY 182
           LP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G+  +  N 
Sbjct: 143 LPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQGNS 202

Query: 183 RLGASPVLPSSSGAEGFDGGWRLS 202
            +G+   + S++GA  F+G  R S
Sbjct: 203 HVGSHRGISSTTGAARFEGVKRFS 220

[Close]

BLAST of CmaCh17G008920 vs. NCBI nr
Match: gi|659108987|ref|XP_008454489.1| (PREDICTED: zinc finger protein 3-like [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-29
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 1


Query: 3   SPPEVKDPSDSKDISPEL-VSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNDISYEGTE 62
           SPP  +    +  I+P   + LDLSLSN D       ELNLID F A+     ++ E T+
Sbjct: 23  SPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPELNLIDCFDAN-----LATEPTD 82

Query: 63  AAAKPRVFSCNFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNST---DCKHSSVSS 122
              +PRVFSCN+C R+F SSQALGGHQNAH R+R  AK   ++ + S      ++SS++S
Sbjct: 83  TETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLAS 142

Query: 123 LPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSIHPFEPEVWDRQPLYTQVATGKWPLSKNY 182
           LP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G+  +  N 
Sbjct: 143 LPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQGNS 202

Query: 183 RLGASPVLPSSSGAEGFDGGWRLS 202
            +G+   + S++GA  F+G  R S
Sbjct: 203 HVGSLRGISSNTGAARFEGVKRFS 220

The following BLAST results are available for this feature:

BLAST of CmaCh17G008920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP3_ARATH	3.0e-18	36.97	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	[more]
ZFP1_ARATH	3.3e-17	46.62	Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1	[more]
ZFP7_ARATH	2.7e-11	32.38	Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1	[more]
ZFP4_ARATH	2.0e-09	31.94	Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2	[more]
ZFP2_ARATH	1.3e-08	47.06	Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1	[more]

BLAST of CmaCh17G008920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8M2_CUCSA	3.4e-69	63.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1	[more]
A0A0A0KVN7_CUCSA	9.1e-30	43.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1	[more]
A0A067DJC5_CITSI	3.8e-28	40.32	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1	[more]
V4S0F0_9ROSI	5.0e-28	40.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1	[more]
A0A061G9A1_THECC	1.9e-27	39.13	Zinc finger protein, putative OS=Theobroma cacao GN=TCM_027404 PE=4 SV=1	[more]

BLAST of CmaCh17G008920 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10970.1	5.9e-20	34.87	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.7e-19	36.97	zinc finger protein 3	[more]
AT1G80730.1	1.9e-18	46.62	zinc-finger protein 1	[more]
AT1G24625.1	1.5e-12	32.38	zinc finger protein 7	[more]
AT1G66140.1	1.1e-10	31.94	zinc finger protein 4	[more]

BLAST of CmaCh17G008920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122986\|ref\|XP_008461428.1\|	2.6e-70	64.16	PREDICTED: zinc finger protein 1-like [Cucumis melo]	[more]
gi\|778730464\|ref\|XP_011659788.1\|	4.9e-69	63.32	PREDICTED: zinc finger protein 3-like [Cucumis sativus]	[more]
gi\|778689686\|ref\|XP_004152329.2\|	1.3e-29	43.63	PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus]	[more]
gi\|700197786\|gb\|KGN52944.1\|	1.3e-29	43.63	hypothetical protein Csa_4G006510 [Cucumis sativus]	[more]
gi\|659108987\|ref\|XP_008454489.1\|	1.7e-29	43.63	PREDICTED: zinc finger protein 3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G008920.1	CmaCh17G008920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 71..91 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 69..96 score: 10
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 66..95 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G008920	Cucsa.105870	Cucumber (Gy14) v1	cgycmaB0237
CmaCh17G008920	Cla012754	Watermelon (97103) v1	cmawmB339
CmaCh17G008920	Cla015329	Watermelon (97103) v1	cmawmB328
CmaCh17G008920	Csa7G432050	Cucumber (Chinese Long) v2	cmacuB388
CmaCh17G008920	MELO3C017834	Melon (DHL92) v3.5.1	cmameB348
CmaCh17G008920	MELO3C023462	Melon (DHL92) v3.5.1	cmameB326
CmaCh17G008920	ClCG09G003270	Watermelon (Charleston Gray)	cmawcgB306
CmaCh17G008920	ClCG07G012130	Watermelon (Charleston Gray)	cmawcgB332
CmaCh17G008920	CSPI07G20170	Wild cucumber (PI 183967)	cmacpiB392
CmaCh17G008920	CmoCh01G001840	Cucurbita moschata (Rifu)	cmacmoB354
CmaCh17G008920	Lsi02G026710	Bottle gourd (USVL1VR-Ls)	cmalsiB348
CmaCh17G008920	Cp4.1LG12g07330	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G008920	MELO3C023462.2	Melon (DHL92) v3.6.1	cmamedB379
CmaCh17G008920	CsaV3_2G032400	Cucumber (Chinese Long) v3	cmacucB0422
CmaCh17G008920	CsaV3_7G031960	Cucumber (Chinese Long) v3	cmacucB0462
CmaCh17G008920	Cla97C09G165510	Watermelon (97103) v2	cmawmbB387
CmaCh17G008920	Bhi09G000427	Wax gourd	cmawgoB0487
CmaCh17G008920	CsGy7G018450	Cucumber (Gy14) v2	cgybcmaB925
CmaCh17G008920	Carg13506	Silver-seed gourd	carcmaB0625
CmaCh17G008920	Carg18739	Silver-seed gourd	carcmaB0497
CmaCh17G008920	Carg04202	Silver-seed gourd	carcmaB0277
CmaCh17G008920	Carg27704	Silver-seed gourd	carcmaB0259

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G008920	CmaCh12G003590	Cucurbita maxima (Rimu)	cmacmaB175
CmaCh17G008920	CmaCh01G001760	Cucurbita maxima (Rimu)	cmacmaB360

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G008920	Cucurbita maxima (Rimu)	cmacmaB382
CmaCh17G008920	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G008920	Cucurbita moschata (Rifu)	cmacmoB374
CmaCh17G008920	Cucurbita pepo (Zucchini)	cmacpeB399
CmaCh17G008920	Cucurbita pepo (Zucchini)	cmacpeB376