Carg27704 (gene) Silver-seed gourd

Overview
NameCarg27704
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein 1
LocationCucurbita_argyrosperma_scaffold_529 : 7951 .. 8724 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

mRNA sequence

ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Coding sequence (CDS)

ATGAGTCTTCCAGCAAAATCAGAGCCAGAAACTACCAGCATCAACTCATTGGCAGATGAACTTCCATGGCTGCAACAAGTTTCAATGGATAGCCCTCCAGAAGTAAAGGATCCAAGTGACTCAAAAGACATAAGCCCTGAACTTGTTTCTCTCGATCTAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGCCAGAAGAATTGAACCTAATTGACTTTTTTTGTGCTGATAATTTACCAAACTACATTTCTTACGAAGGTACAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCACTTTTTGCCCAAGGGAGTTCTTGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAAAGGCTAAACCAGCCCATAAATTAGTTACCAATTCAACTGATTGCAAACACTCGAGTGTGTCCTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATTCAAATGCATTCAATGATTCATAAGCCATTTTCCCATGCACCTGTTTTTGGTTCCTTTCATCCTTTTGAGCTTGAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAACTGGCAAATGGCCCTTGTCGAAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Protein sequence

MSLPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Homology
[Close]
BLAST of Carg27704 vs. NCBI nr
Match: XP_023548450.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 415.2 bits (1066), Expect = 1.6e-112
Identity = 207/230 (90.00%), Postives = 213/230 (92.61%), Query Frame = 0 

Query: 29  MDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL-PEELNLIDFFCADNLPNYISYEG 88
           MDSPPE+KDPSDSKDISP LVSLD SLSNKDLGGSL PEELNLIDFF ADNLPN  S+EG
Sbjct: 1   MDSPPEIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEG 60

Query: 89  TEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSL 148
            EAAAKPRVFSC FCPREF SSQALGGHQNAHNRKRK A+  HKLVTNSTDCK SSVSSL
Sbjct: 61  KEAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSL 120

Query: 149 PFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQS 208
           PFQGFNRSLGIQMHSMIHKPFSHAPVFGSF  FE +VWDRQPLYTQVA+G WPLS+NYQS
Sbjct: 121 PFQGFNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQS 180

Query: 209 GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
           GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Sbjct: 181 GASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 230

[Close]
BLAST of Carg27704 vs. NCBI nr
Match: XP_008461428.1 (PREDICTED: zinc finger protein 1 [Cucumis melo])

HSP 1 Score: 296.6 bits (758), Expect = 8.2e-77
Identity = 161/252 (63.89%), Postives = 185/252 (73.41%), Query Frame = 0 

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL---P 68
           PETT INSLA+EL WLQ           DP+DSKD SPELVSLD  LSN +LGG L    
Sbjct: 3   PETTRINSLAEELTWLQ-----------DPNDSKDTSPELVSLDFRLSNTNLGGGLTQEE 62

Query: 69  EELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKK 128
           EE NLIDFF ADNLPN  SYEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK 
Sbjct: 63  EEPNLIDFFDADNLPNGSSYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKM 122

Query: 129 AKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVW 188
           AK + K+VTNST CK+S           +SLGIQ  SMIHKPFS++PVFGSFHPF+LE  
Sbjct: 123 AKTSSKMVTNSTGCKYS-----------KSLGIQARSMIHKPFSYSPVFGSFHPFQLEAK 182

Query: 189 DRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNEL 248
           +RQ LY Q+A G+WP  KNY S  SPV PS+SGA     GW L   +D+LLDSKR  NEL
Sbjct: 183 NRQSLYEQLAAGQWPSKKNYLSRTSPVPPSTSGATSC-AGWTL---NDSLLDSKRTCNEL 228

Query: 249 HKLDCLDLSLRL 258
           HKLDCLDLSL+L
Sbjct: 243 HKLDCLDLSLKL 228

[Close]
BLAST of Carg27704 vs. NCBI nr
Match: XP_011659788.1 (PREDICTED: zinc finger protein 3-like [Cucumis sativus] >KGN45224.1 hypothetical protein Csa_7G432050 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.0e-74
Identity = 161/253 (63.64%), Postives = 183/253 (72.33%), Query Frame = 0 

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPE-- 68
           PETTSINSLA ELPWLQ           DP+DSKD SPELVSL+  LSN +LGG L +  
Sbjct: 3   PETTSINSLA-ELPWLQ-----------DPNDSKDTSPELVSLEFRLSNTNLGGGLMQXX 62

Query: 69  --ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRK 128
             E NLIDFF ADNLPN   YEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK
Sbjct: 63  XXEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERK 122

Query: 129 KAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEV 188
            AK  +K+VTNST CK+S           +SLGIQ  SMIHKPFSH+ VFGSFHPF+LE 
Sbjct: 123 IAKTGNKMVTNSTACKYS-----------KSLGIQARSMIHKPFSHSSVFGSFHPFQLEA 182

Query: 189 WDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNE 248
             RQ LY QVA G+WP  KNY S  SPV PS+SGA     GW L  N+D+LLDS R  NE
Sbjct: 183 KSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNE 229

Query: 249 LHKLDCLDLSLRL 258
           LHKLDCLDLSL+L
Sbjct: 243 LHKLDCLDLSLKL 229

[Close]
BLAST of Carg27704 vs. NCBI nr
Match: XP_022154830.1 (zinc finger protein 1-like [Momordica charantia])

HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68
Identity = 161/261 (61.69%), Postives = 186/261 (71.26%), Query Frame = 0 

Query: 1   MSLPAKSE--PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNK 60
           MS+PAKSE  PETTSI+   DELPWL+QV             SKDIS E VSLDL LSN+
Sbjct: 1   MSVPAKSEPCPETTSISLSTDELPWLRQV-------------SKDISTE-VSLDLRLSNE 60

Query: 61  DLGGSL-PEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQN 120
           DL GSL PEELNLID F A  LP   S +G E  AKPRV SC +C R+F SSQALGGHQN
Sbjct: 61  DLVGSLMPEELNLIDSFDAICLPG-TSSQGKE-VAKPRVLSCNYCQRKFFSSQALGGHQN 120

Query: 121 AHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKP-FSHAPVFGS 180
           AH+R+RK AK   KL   S++ K SSVSS+   GFNRSLGIQ H+MI KP  SHAP+FGS
Sbjct: 121 AHSRQRKLAKIGRKLDHVSSEYKFSSVSSISLHGFNRSLGIQAHTMIQKPCASHAPIFGS 180

Query: 181 FHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLL 240
           FHP EL+VWDRQ LYT++A G+ P  +++ SG S V  SS GAA FDGGW LS  S +L 
Sbjct: 181 FHPSELDVWDRQHLYTKLAAGR-PSPESFLSGDSSVPSSSRGAARFDGGWMLSPTSGSLF 240

Query: 241 DSKRPHNELHKLDCLDLSLRL 258
           + K  H+ELH+LDCLDLSLRL
Sbjct: 241 NPKHKHDELHELDCLDLSLRL 244

[Close]
BLAST of Carg27704 vs. NCBI nr
Match: KGN52944.1 (hypothetical protein Csa_4G006510 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29
Identity = 96/232 (41.38%), Postives = 127/232 (54.74%), Query Frame = 0 

Query: 3   LPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPEL-VSLDLSLSNKDLG 62
           +P  S  ET++I S           S  SPP  K    +  I+P   + LDL+LSN D  
Sbjct: 5   IPEPSPSETSTIIS----------ASESSPPCPKGDRTTDQINPNSHMGLDLTLSNNDSD 64

Query: 63  GSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNR 122
                ELNLID F A+     ++ E T+   +PRVFSC +C R+F SSQALGGHQNAH R
Sbjct: 65  HGSNPELNLIDCFDAN-----LATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKR 124

Query: 123 KRKKAKPAHKLVTNST---DCKHSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSF 182
           +R  AK   ++ + S      ++SS++SLP  G FNRSLGIQ HSM+HKP  H    GS 
Sbjct: 125 ERTLAKRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSS 184

Query: 183 HPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLS 230
             +    W RQPL    A G+  +  N   G+   + S++GAA F+G  R S
Sbjct: 185 GIYGHSGWSRQPLDQHPAIGRL-MQGNSHVGSHRGISSTTGAARFEGVKRFS 220

[Close]
BLAST of Carg27704 vs. TAIR10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-19
Identity = 81/250 (32.40%), Postives = 119/250 (47.60%), Query Frame = 0 

Query: 24  LQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLG-GSLPEELNLIDFFCADNLPNY 83
           L+  ++D+    ++    +    E + LDL L+  D     L +ELNL+D  C +     
Sbjct: 33  LENYNIDTVAAQEEDDHDQKEGVEGIKLDLMLAGYDSSQPQLNQELNLLD--CLETGVVT 92

Query: 84  ISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHS 143
            S+ G+  + + ++FSC +C R F SSQALGGHQNAH R+R  AK   ++ + +      
Sbjct: 93  PSFNGS-TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY 152

Query: 144 SVSSLPFQG--FNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWP 203
             + +PF G   NR+LGIQ HSM HKP S+    G +       W R PL  Q A  K  
Sbjct: 153 GFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQIN---WSRIPLVQQPAIAKLT 212

Query: 204 LSKNYQSG-----ASPVLPSSSGAAGFDGG--------WRLSSNSDTLLDSKRPHNELHK 258
            ++N+ +      A P+  +      FD G          L    + LL   +P  E  K
Sbjct: 213 STENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELL---KPAEE-EK 272

[Close]
BLAST of Carg27704 vs. TAIR10
Match: AT5G25160.1 (zinc finger protein 3)

HSP 1 Score: 93.2 bits (230), Expect = 2.5e-19
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 0 

Query: 67  ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKA 126
           ELNLID  C D+  + ++   T  + + ++FSC +C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVNESTT--STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 127 KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSFHPFEL 186
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G +     
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 187 EVWDRQPLYTQVATGKWPLSKNY 206
             W R P   Q A GK+P   N+
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNF 170

[Close]
BLAST of Carg27704 vs. TAIR10
Match: AT1G80730.1 (zinc-finger protein 1)

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-17
Identity = 60/133 (45.11%), Postives = 69/133 (51.88%), Query Frame = 0 

Query: 51  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQ 110
           L+L L+    G +   ELNLID F                 A PRVFSC +C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSXXXXXXXXXXXXQLADPRVFSCNYCQRKFYSSQ 81

Query: 111 ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 168
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]
BLAST of Carg27704 vs. TAIR10
Match: AT1G24625.1 (zinc finger protein 7)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-12
Identity = 71/216 (32.87%), Postives = 101/216 (46.76%), Query Frame = 0 

Query: 56  SNKDLGGSLPE------ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSS 115
           SN+DL  S PE      +L L D F  D        + T+  A PRVFSC +C R+F SS
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT-------KSTKCEANPRVFSCNYCRRKFYSS 80

Query: 116 QALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPF 175
           QALGGHQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   
Sbjct: 81  QALGGHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTL 140

Query: 176 SH-APVFGSFHPFELEVWDRQPLYTQVATGK----WPLS--KNYQSGASPVLPSSSGAAG 235
           S   P+   FH  +    +  PL+     G     WP S  +  +   +PV+  +S  +G
Sbjct: 141 SQPQPLVSRFH-HQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESG 200

Query: 236 FDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
            D    +++N     +S +P          DL+LRL
Sbjct: 201 LDLN-SVAANGGVDNNSSKP----------DLTLRL 209

[Close]
BLAST of Carg27704 vs. TAIR10
Match: AT5G01860.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-09
Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 0 

Query: 88  TEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTN 136
           T   AK RVF+CTFC +EF +SQALGGHQNAH ++R  AK   ++  N
Sbjct: 58  TRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEIN 105

[Close]
BLAST of Carg27704 vs. Swiss-Prot
Match: sp|Q39262|ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.5e-18
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 0 

Query: 67  ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKA 126
           ELNLID  C D+  + ++   T  + + ++FSC +C R F SSQALGGHQNAH R+R  A
Sbjct: 35  ELNLID--CIDDTTSIVNESTT--STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLA 94

Query: 127 KPAHKLVTNSTDCKHS-SVSSLPFQG---FNRSLGIQMHSMIHKPFSHAPVFGSFHPFEL 186
           K   ++  +++   H    S LPF G    +RSLGIQ HS+ HK  S+    G +     
Sbjct: 95  KRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQIN- 154

Query: 187 EVWDRQPLYTQVATGKWPLSKNY 206
             W R P   Q A GK+P   N+
Sbjct: 155 --WSRLPFDQQPAIGKFPSMDNF 170

[Close]
BLAST of Carg27704 vs. Swiss-Prot
Match: sp|Q42485|ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.4e-16
Identity = 60/133 (45.11%), Postives = 69/133 (51.88%), Query Frame = 0 

Query: 51  LDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQ 110
           L+L L+    G +   ELNLID F                 A PRVFSC +C R+F SSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSXXXXXXXXXXXXQLADPRVFSCNYCQRKFYSSQ 81

Query: 111 ALGGHQNAHNRKRKKAKPA--HKLVTNSTDCK-----HSSVS------SLPFQGF--NRS 168
           ALGGHQNAH R+R  AK    +K+  +S         H SVS      SLP  G   NRS
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

[Close]
BLAST of Carg27704 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.1e-11
Identity = 71/216 (32.87%), Postives = 101/216 (46.76%), Query Frame = 0 

Query: 56  SNKDLGGSLPE------ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSS 115
           SN+DL  S PE      +L L D F  D        + T+  A PRVFSC +C R+F SS
Sbjct: 21  SNQDL--SKPESNHVSLDLKLNDTFNDDT-------KSTKCEANPRVFSCNYCRRKFYSS 80

Query: 116 QALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHS-MIHKPF 175
           QALGGHQNAH R+R  AK A  +       +       P+   + SLG+Q HS ++H   
Sbjct: 81  QALGGHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTL 140

Query: 176 SH-APVFGSFHPFELEVWDRQPLYTQVATGK----WPLS--KNYQSGASPVLPSSSGAAG 235
           S   P+   FH  +    +  PL+     G     WP S  +  +   +PV+  +S  +G
Sbjct: 141 SQPQPLVSRFH-HQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESG 200

Query: 236 FDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
            D    +++N     +S +P          DL+LRL
Sbjct: 201 LDLN-SVAANGGVDNNSSKP----------DLTLRL 209

[Close]
BLAST of Carg27704 vs. Swiss-Prot
Match: sp|Q39261|ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0 

Query: 93  KPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNSTDCKHSSVSSLPFQG 152
           +PRVFSC +C R+F SSQALGGHQNAH  +R  AK + +L  +S      S    PF G
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTV--DSDQPYPFSG 104

[Close]
BLAST of Carg27704 vs. Swiss-Prot
Match: sp|Q39263|ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 0 

Query: 95  RVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKL------------VTNSTDCKHS 154
           RVFSC +C R+F SSQALGGHQNAH R+R  AK A ++               +     +
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 155 SVSSLPFQGFN-------RSLGIQMHSMIH 166
           ++S LP  G         R+LGI+ HS  H
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]
BLAST of Carg27704 vs. TrEMBL
Match: tr|A0A1S3CEM5|A0A1S3CEM5_CUCME (zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103500023 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 5.4e-77
Identity = 161/252 (63.89%), Postives = 185/252 (73.41%), Query Frame = 0 

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSL---P 68
           PETT INSLA+EL WLQ           DP+DSKD SPELVSLD  LSN +LGG L    
Sbjct: 3   PETTRINSLAEELTWLQ-----------DPNDSKDTSPELVSLDFRLSNTNLGGGLTQEE 62

Query: 69  EELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKK 128
           EE NLIDFF ADNLPN  SYEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK 
Sbjct: 63  EEPNLIDFFDADNLPNGSSYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKM 122

Query: 129 AKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVW 188
           AK + K+VTNST CK+S           +SLGIQ  SMIHKPFS++PVFGSFHPF+LE  
Sbjct: 123 AKTSSKMVTNSTGCKYS-----------KSLGIQARSMIHKPFSYSPVFGSFHPFQLEAK 182

Query: 189 DRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNEL 248
           +RQ LY Q+A G+WP  KNY S  SPV PS+SGA     GW L   +D+LLDSKR  NEL
Sbjct: 183 NRQSLYEQLAAGQWPSKKNYLSRTSPVPPSTSGATSC-AGWTL---NDSLLDSKRTCNEL 228

Query: 249 HKLDCLDLSLRL 258
           HKLDCLDLSL+L
Sbjct: 243 HKLDCLDLSLKL 228

[Close]
BLAST of Carg27704 vs. TrEMBL
Match: tr|A0A0A0K8M2|A0A0A0K8M2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432050 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.6e-75
Identity = 161/253 (63.64%), Postives = 183/253 (72.33%), Query Frame = 0 

Query: 9   PETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPELVSLDLSLSNKDLGGSLPE-- 68
           PETTSINSLA ELPWLQ           DP+DSKD SPELVSL+  LSN +LGG L +  
Sbjct: 3   PETTSINSLA-ELPWLQ-----------DPNDSKDTSPELVSLEFRLSNTNLGGGLMQXX 62

Query: 69  --ELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRK 128
             E NLIDFF ADNLPN   YEG EAAA+PRVFSC +CPR+F+SSQ+LGGHQNAH+R+RK
Sbjct: 63  XXEPNLIDFFYADNLPNGSFYEGVEAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERK 122

Query: 129 KAKPAHKLVTNSTDCKHSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEV 188
            AK  +K+VTNST CK+S           +SLGIQ  SMIHKPFSH+ VFGSFHPF+LE 
Sbjct: 123 IAKTGNKMVTNSTACKYS-----------KSLGIQARSMIHKPFSHSSVFGSFHPFQLEA 182

Query: 189 WDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNE 248
             RQ LY QVA G+WP  KNY S  SPV PS+SGA     GW L  N+D+LLDS R  NE
Sbjct: 183 KSRQFLYEQVAAGQWPSQKNYLSRTSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNE 229

Query: 249 LHKLDCLDLSLRL 258
           LHKLDCLDLSL+L
Sbjct: 243 LHKLDCLDLSLKL 229

[Close]
BLAST of Carg27704 vs. TrEMBL
Match: tr|A0A0A0KVN7|A0A0A0KVN7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006510 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-29
Identity = 96/232 (41.38%), Postives = 127/232 (54.74%), Query Frame = 0 

Query: 3   LPAKSEPETTSINSLADELPWLQQVSMDSPPEVKDPSDSKDISPEL-VSLDLSLSNKDLG 62
           +P  S  ET++I S           S  SPP  K    +  I+P   + LDL+LSN D  
Sbjct: 5   IPEPSPSETSTIIS----------ASESSPPCPKGDRTTDQINPNSHMGLDLTLSNNDSD 64

Query: 63  GSLPEELNLIDFFCADNLPNYISYEGTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNR 122
                ELNLID F A+     ++ E T+   +PRVFSC +C R+F SSQALGGHQNAH R
Sbjct: 65  HGSNPELNLIDCFDAN-----LATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKR 124

Query: 123 KRKKAKPAHKLVTNST---DCKHSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSF 182
           +R  AK   ++ + S      ++SS++SLP  G FNRSLGIQ HSM+HKP  H    GS 
Sbjct: 125 ERTLAKRTQRVGSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSS 184

Query: 183 HPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGFDGGWRLS 230
             +    W RQPL    A G+  +  N   G+   + S++GAA F+G  R S
Sbjct: 185 GIYGHSGWSRQPLDQHPAIGRL-MQGNSHVGSHRGISSTTGAARFEGVKRFS 220

[Close]
BLAST of Carg27704 vs. TrEMBL
Match: tr|A0A1S3BZI2|A0A1S3BZI2_CUCME (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 7.2e-29
Identity = 90/207 (43.48%), Postives = 118/207 (57.00%), Query Frame = 0 

Query: 28  SMDSPPEVKDPSDSKDISPEL-VSLDLSLSNKDLGGSLPEELNLIDFFCADNLPNYISYE 87
           S  SPP  +    +  I+P   + LDLSLSN D       ELNLID F A+     ++ E
Sbjct: 20  SESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPELNLIDCFDAN-----LATE 79

Query: 88  GTEAAAKPRVFSCTFCPREFLSSQALGGHQNAHNRKRKKAKPAHKLVTNST---DCKHSS 147
            T+   +PRVFSC +C R+F SSQALGGHQNAH R+R  AK   ++ + S      ++SS
Sbjct: 80  PTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSS 139

Query: 148 VSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLS 207
           ++SLP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G+  + 
Sbjct: 140 LASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQ 199

Query: 208 KNYQSGASPVLPSSSGAAGFDGGWRLS 230
            N   G+   + S++GAA F+G  R S
Sbjct: 200 GNSHVGSLRGISSNTGAARFEGVKRFS 220

[Close]
BLAST of Carg27704 vs. TrEMBL
Match: tr|F6HXT4|F6HXT4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g09080 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.7e-28
Identity = 118/289 (40.83%), Postives = 155/289 (53.63%), Query Frame = 0 

Query: 1   MSLPAKSEP---ETTSINSLADELPWLQQVSMDSPPEVK-----DPSDSKDISPELVSLD 60
           M +P +SEP   ET+SI S+++  P L   SMDSP E K     D +  +  +P+LV LD
Sbjct: 1   MEIP-RSEPCLSETSSIISVSEAAPSL-NTSMDSPKEGKQQEGQDRNQEELTNPDLV-LD 60

Query: 61  LSLSNKDLGGSLPEELNLIDFFCADNLPNYISY-EGTEAAAKPRVFSCTFCPREFLSSQA 120
           LSLS++DL      ELNLI+ F   +  N+    +G E   +PRVFSC +C R+F SSQA
Sbjct: 61  LSLSSRDLEQGSRPELNLINSFEMGSSQNHSEIPQGNE--GEPRVFSCNYCQRKFYSSQA 120

Query: 121 LGGHQNAHNRKRKKAKPAHKLVTNSTDCKH--------SSVSSLPFQG-FNRSLGIQMHS 180
           LGGHQNAH R+R  AK   ++   S    H        SS++SLP  G FNRSLGIQ HS
Sbjct: 121 LGGHQNAHKRERTLAKRGQRIGAASVAFGHPLPNPYRFSSMASLPLHGSFNRSLGIQAHS 180

Query: 181 MIHKPFSHAPVFGSFHPFELEVWDRQPLYTQVATGKWPLSKNYQSGASPVLPSSSGAAGF 240
           +IHKP S +        +  + W R P+  Q A G+    +NY  G+S    SS GAA F
Sbjct: 181 LIHKPSSLSSTL-----YGHQGWSRLPIDQQPAIGRL-APENYHVGSS---SSSGGAARF 240

Query: 241 D--------------GGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 258
           +              G W  +SN     + K   +EL K   LDLSL+L
Sbjct: 241 ETVRKFSRPASEGIGGYWWNNSN-----NLKMNQDELQK---LDLSLKL 267

The following BLAST results are available for this feature:
BLAST of Carg27704 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023548450.11.6e-11290.00zinc finger protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_008461428.18.2e-7763.89PREDICTED: zinc finger protein 1 [Cucumis melo][more]
XP_011659788.11.0e-7463.64PREDICTED: zinc finger protein 3-like [Cucumis sativus] >KGN45224.1 hypothetical... [more]
XP_022154830.11.4e-6861.69zinc finger protein 1-like [Momordica charantia][more]
KGN52944.12.9e-2941.38hypothetical protein Csa_4G006510 [Cucumis sativus][more]
BLAST of Carg27704 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10970.11.9e-1932.40C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G25160.12.5e-1940.56zinc finger protein 3[more]
AT1G80730.15.2e-1745.11zinc-finger protein 1[more]
AT1G24625.15.1e-1232.87zinc finger protein 7[more]
AT5G01860.16.8e-0956.25C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of Carg27704 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q39262|ZFP3_ARATH4.5e-1840.56Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1[more]
sp|Q42485|ZFP1_ARATH9.4e-1645.11Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1[more]
sp|Q39266|ZFP7_ARATH9.1e-1132.87Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1[more]
sp|Q39261|ZFP2_ARATH1.6e-0750.85Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1[more]
sp|Q39263|ZFP4_ARATH1.6e-0740.00Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2[more]
BLAST of Carg27704 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CEM5|A0A1S3CEM5_CUCME5.4e-7763.89zinc finger protein 1 OS=Cucumis melo OX=3656 GN=LOC103500023 PE=4 SV=1[more]
tr|A0A0A0K8M2|A0A0A0K8M2_CUCSA6.6e-7563.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432050 PE=4 SV=1[more]
tr|A0A0A0KVN7|A0A0A0KVN7_CUCSA1.9e-2941.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G006510 PE=4 SV=1[more]
tr|A0A1S3BZI2|A0A1S3BZI2_CUCME7.2e-2943.48zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103494887 PE=4 SV=1[more]
tr|F6HXT4|F6HXT4_VITVI4.7e-2840.83Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g09080 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27704-RACarg27704-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 79..147
e-value: 1.3E-5
score: 26.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR26374:SF258ZINC FINGER PROTEIN 1coord: 10..257
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 10..257
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 99..119
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 97..124
score: 10.575
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 94..123