Cp4.1LG12g07330 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g07330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger protein, putative
LocationCp4.1LG12 : 7001987 .. 7002679 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCCCTCCAGAAATAAAAGATCCAAGTGACTCAAAAGACATAAGCCCTGGACTTGTTTCCCTCGATCCAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGATGCCAGAGGAACTGAACCTAATTGACTTTTTTTCTGCTGATAATTTACCAAACGACACTTCTCACGAAGGTAAAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTCGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAATGGCTCAAACAGGCCATAAATTGGTTACCAATTCAACTGATTGCAAACAGTCGAGCGTGTCGTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATCCAAATGCATTCAATGATTCATAAGCCTTTTTCCCATGCACCTGTTTTTGGTTCCTTCCGTTCTTTTGAGTCTAAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAAGTGGCATATGGCCCTTGTCCGAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

mRNA sequence

ATGGATAGCCCTCCAGAAATAAAAGATCCAAGTGACTCAAAAGACATAAGCCCTGGACTTGTTTCCCTCGATCCAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGATGCCAGAGGAACTGAACCTAATTGACTTTTTTTCTGCTGATAATTTACCAAACGACACTTCTCACGAAGGTAAAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTCGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAATGGCTCAAACAGGCCATAAATTGGTTACCAATTCAACTGATTGCAAACAGTCGAGCGTGTCGTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATCCAAATGCATTCAATGATTCATAAGCCTTTTTCCCATGCACCTGTTTTTGGTTCCTTCCGTTCTTTTGAGTCTAAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAAGTGGCATATGGCCCTTGTCCGAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Coding sequence (CDS)

ATGGATAGCCCTCCAGAAATAAAAGATCCAAGTGACTCAAAAGACATAAGCCCTGGACTTGTTTCCCTCGATCCAAGCCTCTCAAACAAGGATTTGGGTGGGAGTTTGATGCCAGAGGAACTGAACCTAATTGACTTTTTTTCTGCTGATAATTTACCAAACGACACTTCTCACGAAGGTAAAGAAGCAGCAGCTAAGCCTCGAGTTTTCTCCTGCAATTTTTGCCCAAGGGAGTTCTCGAGTTCACAGGCACTTGGAGGCCACCAAAATGCTCATAATCGAAAGAGGAAAATGGCTCAAACAGGCCATAAATTGGTTACCAATTCAACTGATTGCAAACAGTCGAGCGTGTCGTCCCTGCCTTTTCAAGGCTTCAATAGATCACTTGGAATCCAAATGCATTCAATGATTCATAAGCCTTTTTCCCATGCACCTGTTTTTGGTTCCTTCCGTTCTTTTGAGTCTAAGGTCTGGGACAGACAGCCTCTTTACACGCAAGTGGCAAGTGGCATATGGCCCTTGTCCGAGAATTATCAGTCGGGGGCCTCACCGGTACTGCCATCAAGCAGCGGAGCAGCAGGTTTTGATGGTGGTTGGAGGCTGTCGTCAAACAGTGACACATTGTTGGATTCAAAGCGTCCTCATAATGAACTGCACAAGCTAGACTGTTTAGACTTGTCTTTGAGGCTGTAA

Protein sequence

MDSPPEIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQGFNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL
Homology
[Close]
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 56/123 (45.53%), Postives = 70/123 (56.91%), Query Frame = 1 

Query: 34  GSLMPEELNLIDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQALGGHQNAHN 93
           G+    ELNLID F   +         +E  A PRVFSCN+C R+F SSQALGGHQNAH 
Sbjct: 32  GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query: 94  RKRKMAQTG--HKLVTNSTDCKQ-----------SSVSSLPFQGF--NRS-LGIQMHSMI 141
           R+R +A+ G  +K+  +S                +S++SLP  G   NRS LGIQ HS I
Sbjct: 92  RERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-16
Identity = 75/231 (32.47%), Postives = 111/231 (48.05%), Query Frame = 1 

Query: 22  SLDPSLSNKDLGGSLMPEELNLIDFFS-ADNLPNDTSHEGKEAAAKPRVFSCNFCPREFS 81
           SL+ S+ +++        ELNLID      ++ N+++      + + ++FSCN+C R F 
Sbjct: 17  SLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTFY 76

Query: 82  SSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQS-SVSSLPFQG---FNRSLGIQMHSM 141
           SSQALGGHQNAH R+R +A+ G ++  +++        S LPF G    +RSLGIQ HS+
Sbjct: 77  SSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSI 136

Query: 142 IHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASPVL---------- 201
            HK  S+    G +       W R P   Q A G +P  +N+      ++          
Sbjct: 137 SHKLSSYNGFGGHYGQIN---WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRS 196

Query: 202 -----PSSSGAAGFDGGWRLSS--NSDTLLDSKRPHNELHKLDCLDLSLRL 231
                PS++G    +G   L        LL S   H E  K   LDLSL+L
Sbjct: 197 NNIDSPSNTGRV-LEGSPTLEQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

[Close]
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-11
Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 1 

Query: 28  SNKDLGGSLMPEELNL-IDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQALG 87
           SN+DL     PE  ++ +D    D   +DT  +  +  A PRVFSCN+C R+F SSQALG
Sbjct: 21  SNQDLS---KPESNHVSLDLKLNDTFNDDT--KSTKCEANPRVFSCNYCRRKFYSSQALG 80

Query: 88  GHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQGFNRSLGIQMHS-MIHKPFSHAP 147
           GHQNAH R+R MA+    +       +       P+   + SLG+Q HS ++H   S   
Sbjct: 81  GHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQ 140

Query: 148 VFGSFRSFESKVWDRQPLYTQVASG----IWPLS--ENYQSGASPVLPSSSGAAGFDGGW 207
              S    +    +  PL+     G     WP S  +  +   +PV+  +S  +G D   
Sbjct: 141 PLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN- 200

Query: 208 RLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            +++N     +S +P          DL+LRL
Sbjct: 201 SVAANGGVDNNSSKP----------DLTLRL 209

[Close]
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 1 

Query: 21  VSLDPSLS-NKDLGGSLMPEELNL-IDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPRE 80
           +SL+ SLS N +   +L  E  +L +   S     N    + ++ +   RVFSCN+C R+
Sbjct: 34  ISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRK 93

Query: 81  FSSSQALGGHQNAHNRKRKMAQTGHKL------------VTNSTDCKQSSVSSLPFQGFN 139
           F SSQALGGHQNAH R+R +A+   ++               +     +++S LP  G  
Sbjct: 94  FYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSG 153

[Close]
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.7e-08
Identity = 38/100 (38.00%), Postives = 51/100 (51.00%), Query Frame = 1 

Query: 25  PSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQA 84
           PS  N  L   L+ E        S+ +  + +S        +PRVFSCN+C R+F SSQA
Sbjct: 14  PSYKNHQLNLELVLEP-------SSMSSSSSSSTNSSSCLEQPRVFSCNYCQRKFYSSQA 73

Query: 85  LGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQG 125
           LGGHQNAH  +R +A+   +L  +S      S    PF G
Sbjct: 74  LGGHQNAHKLERTLAKKSRELFRSSNTV--DSDQPYPFSG 104

[Close]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match: A0A0A0K8M2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.2e-67
Identity = 142/229 (62.01%), Postives = 171/229 (74.67%), Query Frame = 1 

Query: 5   PEIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEEL---NLIDFFSADNLPNDTSHEGK 64
           P ++DP+DSKD SP LVSL+  LSN +LGG LM EE    NLIDFF ADNLPN + +EG 
Sbjct: 15  PWLQDPNDSKDTSPELVSLEFRLSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGV 74

Query: 65  EAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLP 124
           EAAA+PRVFSCN+CPR+F SSQ+LGGHQNAH+R+RK+A+TG+K+VTNST CK        
Sbjct: 75  EAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACK-------- 134

Query: 125 FQGFNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSG 184
              +++SLGIQ  SMIHKPFSH+ VFGSF  F+ +   RQ LY QVA+G WP  +NY S 
Sbjct: 135 ---YSKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSR 194

Query: 185 ASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            SPV PS+SGA     GW L  N+D+LLDS R  NELHKLDCLDLSL+L
Sbjct: 195 TSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNELHKLDCLDLSLKL 229

[Close]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match: A0A067DJC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-27
Identity = 102/249 (40.96%), Postives = 133/249 (53.41%), Query Frame = 1 

Query: 14  KDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFF-----SADNLPNDTSH-EGKEAAAKP 73
           ++ +P LV LD SLSNKD      PE LNLID F     S D+L N+  H +G E   +P
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPE-LNLIDCFKSTDSSQDSLENNDIHRQGNET--EP 98

Query: 74  RVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNS----------------TD 133
           RVFSCN+C R+F SSQALGGHQNAH R+R +A+ G ++ T S                T 
Sbjct: 99  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTH 158

Query: 134 CKQSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASG 193
               S++SLP  G FNRSLGIQ+HSMIHKP        S  S+    W RQP+  Q A G
Sbjct: 159 RSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIG 218

Query: 194 IWPLSENYQSGASPVLPSSSGAAGFDGGWRLSSNS---------DTLLDSKRPHNELHKL 231
                EN+Q+ A+    S +G + F+   + S  +         D +   K   ++L K 
Sbjct: 219 KLS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK- 278

[Close]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match: V4S0F0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.5e-27
Identity = 102/250 (40.80%), Postives = 133/250 (53.20%), Query Frame = 1 

Query: 14  KDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFF-----SADNLPNDTSH-EGKEAAAKP 73
           ++ +P LV LD SLSNKD      PE LNLID F     S D+L N+  H +G E   +P
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPE-LNLIDCFKSTDSSQDSLENNDIHRQGNET--EP 98

Query: 74  RVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNS-----------------T 133
           RVFSCN+C R+F SSQALGGHQNAH R+R +A+ G ++ T S                 T
Sbjct: 99  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSSLAFGHHHNPNSYT 158

Query: 134 DCKQSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVAS 193
                S++SLP  G FNRSLGIQ+HSMIHKP        S  S+    W RQP+  Q A 
Sbjct: 159 HRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAI 218

Query: 194 GIWPLSENYQSGASPVLPSSSGAAGFDGGWRLSSNS---------DTLLDSKRPHNELHK 231
           G     EN+Q+ A+    S +G + F+   + S  +         D +   K   ++L K
Sbjct: 219 GKLS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK 278

[Close]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match: A0A0A0KVN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.6e-26
Identity = 89/205 (43.41%), Postives = 114/205 (55.61%), Query Frame = 1 

Query: 3   SPPEIKDPSDSKDISPGL-VSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGK 62
           SPP  K    +  I+P   + LD +LSN D      PE LNLID F A+     T  E  
Sbjct: 23  SPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE-LNLIDCFDANLATEPTDTE-- 82

Query: 63  EAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNST---DCKQSSVS 122
               +PRVFSCN+C R+F SSQALGGHQNAH R+R +A+   ++ + S      + SS++
Sbjct: 83  ---TEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSGSNFGLAHRYSSLA 142

Query: 123 SLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSEN 182
           SLP  G FNRSLGIQ HSM+HKP  H    GS   +    W RQPL    A G   +  N
Sbjct: 143 SLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQPLDQHPAIGRL-MQGN 202

Query: 183 YQSGASPVLPSSSGAAGFDGGWRLS 203
              G+   + S++GAA F+G  R S
Sbjct: 203 SHVGSHRGISSTTGAARFEGVKRFS 220

[Close]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match: V7AT75_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G160000g PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 95/235 (40.43%), Postives = 124/235 (52.77%), Query Frame = 1 

Query: 6   EIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGKEAAA 65
           E +D     D  P ++ LD SLSNKD G      ELNL++ F   N   ++S   +    
Sbjct: 40  ESEDQKHPHDSIPRVL-LDLSLSNKDSGDDDSKPELNLLNCFHT-NFSENSSESSQGNEL 99

Query: 66  KPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQG- 125
            PRVFSCN+C R+F SSQALGGHQNAH R+R +A+ G+K          S++  LP  G 
Sbjct: 100 DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKAGAADFGHTYSTMPFLPSHGL 159

Query: 126 FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASP 185
           +N+SLGIQ+H+MI+KP    P FG      SK W RQPL +Q A G + +    +S  + 
Sbjct: 160 YNKSLGIQVHAMINKPSHQTPFFG---LCHSKGWQRQPLDSQPAIGNFRVVAETESSLAD 219

Query: 186 VLPS---------SSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            +P          S G  GF  G      S T L SK+      KL  LDLSL+L
Sbjct: 220 SVPKLGKFSTRLVSEGFGGFCFG------SITHLKSKQ-----EKLQKLDLSLKL 258

[Close]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 79/238 (33.19%), Postives = 112/238 (47.06%), Query Frame = 1 

Query: 8   KDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGKEAAAKP 67
           +D  D K+   G + LD  L+  D     + +ELNL+D      +   T       + + 
Sbjct: 46  EDDHDQKEGVEG-IKLDLMLAGYDSSQPQLNQELNLLDCLETGVV---TPSFNGSTSTEQ 105

Query: 68  RVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQG--F 127
           ++FSCN+C R F SSQALGGHQNAH R+R +A+ G ++ + +        + +PF G   
Sbjct: 106 KLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPFHGQYS 165

Query: 128 NRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSG---- 187
           NR+LGIQ HSM HKP S+    G +       W R PL  Q A      +EN+ +     
Sbjct: 166 NRTLGIQAHSMSHKPSSYNVYGGEYGQIN---WSRIPLVQQPAIAKLTSTENHYNHHQMM 225

Query: 188 -ASPVLPSSSGAAGFDGG--------WRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            A P+  +      FD G          L    + LL   +P  E  K   LDLSL+L
Sbjct: 226 IAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELL---KPAEE-EKQKNLDLSLKL 272

[Close]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-18
Identity = 56/123 (45.53%), Postives = 70/123 (56.91%), Query Frame = 1 

Query: 34  GSLMPEELNLIDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQALGGHQNAHN 93
           G+    ELNLID F   +         +E  A PRVFSCN+C R+F SSQALGGHQNAH 
Sbjct: 32  GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query: 94  RKRKMAQTG--HKLVTNSTDCKQ-----------SSVSSLPFQGF--NRS-LGIQMHSMI 141
           R+R +A+ G  +K+  +S                +S++SLP  G   NRS LGIQ HS I
Sbjct: 92  RERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTI 151

[Close]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 75/231 (32.47%), Postives = 111/231 (48.05%), Query Frame = 1 

Query: 22  SLDPSLSNKDLGGSLMPEELNLIDFFS-ADNLPNDTSHEGKEAAAKPRVFSCNFCPREFS 81
           SL+ S+ +++        ELNLID      ++ N+++      + + ++FSCN+C R F 
Sbjct: 17  SLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNEST-----TSTEQKLFSCNYCQRTFY 76

Query: 82  SSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQS-SVSSLPFQG---FNRSLGIQMHSM 141
           SSQALGGHQNAH R+R +A+ G ++  +++        S LPF G    +RSLGIQ HS+
Sbjct: 77  SSQALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSI 136

Query: 142 IHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASPVL---------- 201
            HK  S+    G +       W R P   Q A G +P  +N+      ++          
Sbjct: 137 SHKLSSYNGFGGHYGQIN---WSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRS 196

Query: 202 -----PSSSGAAGFDGGWRLSS--NSDTLLDSKRPHNELHKLDCLDLSLRL 231
                PS++G    +G   L        LL S   H E  K   LDLSL+L
Sbjct: 197 NNIDSPSNTGRV-LEGSPTLEQWHGDKGLLLSTSHHEEQQK---LDLSLKL 235

[Close]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 66/211 (31.28%), Postives = 99/211 (46.92%), Query Frame = 1 

Query: 28  SNKDLGGSLMPEELNL-IDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPREFSSSQALG 87
           SN+DL     PE  ++ +D    D   +DT  +  +  A PRVFSCN+C R+F SSQALG
Sbjct: 21  SNQDLS---KPESNHVSLDLKLNDTFNDDT--KSTKCEANPRVFSCNYCRRKFYSSQALG 80

Query: 88  GHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQGFNRSLGIQMHS-MIHKPFSHAP 147
           GHQNAH R+R MA+    +       +       P+   + SLG+Q HS ++H   S   
Sbjct: 81  GHQNAHKRERTMAKRAMHM------GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQ 140

Query: 148 VFGSFRSFESKVWDRQPLYTQVASG----IWPLS--ENYQSGASPVLPSSSGAAGFDGGW 207
              S    +    +  PL+     G     WP S  +  +   +PV+  +S  +G D   
Sbjct: 141 PLVSRFHHQGYFGNTVPLFFDYDDGGSDFFWPGSFRQVVEEAEAPVVVVASTESGLDLN- 200

Query: 208 RLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            +++N     +S +P          DL+LRL
Sbjct: 201 SVAANGGVDNNSSKP----------DLTLRL 209

[Close]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-10
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 1 

Query: 21  VSLDPSLS-NKDLGGSLMPEELNL-IDFFSADNLPNDTSHEGKEAAAKPRVFSCNFCPRE 80
           +SL+ SLS N +   +L  E  +L +   S     N    + ++ +   RVFSCN+C R+
Sbjct: 34  ISLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRK 93

Query: 81  FSSSQALGGHQNAHNRKRKMAQTGHKL------------VTNSTDCKQSSVSSLPFQGFN 139
           F SSQALGGHQNAH R+R +A+   ++               +     +++S LP  G  
Sbjct: 94  FYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSG 153

[Close]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match: gi|659122986|ref|XP_008461428.1| (PREDICTED: zinc finger protein 1-like [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 6.0e-67
Identity = 141/226 (62.39%), Postives = 170/226 (75.22%), Query Frame = 1 

Query: 7   IKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEEL--NLIDFFSADNLPNDTSHEGKEAA 66
           ++DP+DSKD SP LVSLD  LSN +LGG L  EE   NLIDFF ADNLPN +S+EG EAA
Sbjct: 18  LQDPNDSKDTSPELVSLDFRLSNTNLGGGLTQEEEEPNLIDFFDADNLPNGSSYEGVEAA 77

Query: 67  AKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQG 126
           A+PRVFSCN+CPR+F SSQ+LGGHQNAH+R+RKMA+T  K+VTNST CK           
Sbjct: 78  ARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKMAKTSSKMVTNSTGCK----------- 137

Query: 127 FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASP 186
           +++SLGIQ  SMIHKPFS++PVFGSF  F+ +  +RQ LY Q+A+G WP  +NY S  SP
Sbjct: 138 YSKSLGIQARSMIHKPFSYSPVFGSFHPFQLEAKNRQSLYEQLAAGQWPSKKNYLSRTSP 197

Query: 187 VLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
           V PS+SGA     GW L   +D+LLDSKR  NELHKLDCLDLSL+L
Sbjct: 198 VPPSTSGATSC-AGWTL---NDSLLDSKRTCNELHKLDCLDLSLKL 228

[Close]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match: gi|778730464|ref|XP_011659788.1| (PREDICTED: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.0e-66
Identity = 142/229 (62.01%), Postives = 171/229 (74.67%), Query Frame = 1 

Query: 5   PEIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEEL---NLIDFFSADNLPNDTSHEGK 64
           P ++DP+DSKD SP LVSL+  LSN +LGG LM EE    NLIDFF ADNLPN + +EG 
Sbjct: 15  PWLQDPNDSKDTSPELVSLEFRLSNTNLGGGLMQEEEEEPNLIDFFYADNLPNGSFYEGV 74

Query: 65  EAAAKPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLP 124
           EAAA+PRVFSCN+CPR+F SSQ+LGGHQNAH+R+RK+A+TG+K+VTNST CK        
Sbjct: 75  EAAARPRVFSCNYCPRKFVSSQSLGGHQNAHSRERKIAKTGNKMVTNSTACK-------- 134

Query: 125 FQGFNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSG 184
              +++SLGIQ  SMIHKPFSH+ VFGSF  F+ +   RQ LY QVA+G WP  +NY S 
Sbjct: 135 ---YSKSLGIQARSMIHKPFSHSSVFGSFHPFQLEAKSRQFLYEQVAAGQWPSQKNYLSR 194

Query: 185 ASPVLPSSSGAAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            SPV PS+SGA     GW L  N+D+LLDS R  NELHKLDCLDLSL+L
Sbjct: 195 TSPVPPSTSGATSC-AGWTL--NNDSLLDSNRTCNELHKLDCLDLSLKL 229

[Close]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match: gi|951034276|ref|XP_014515964.1| (PREDICTED: zinc finger protein 3-like [Vigna radiata var. radiata])

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-27
Identity = 97/232 (41.81%), Postives = 126/232 (54.31%), Query Frame = 1 

Query: 6   EIKDPSDSKDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFFSADNLPNDTSHEGKEAAA 65
           E  D     D +PG++ LD SLSNKD G      ELNL++ F   N   ++S   +    
Sbjct: 40  ESDDQKHPNDSNPGVL-LDLSLSNKDSGDDESKPELNLLNCFHT-NFSENSSESSQGNEL 99

Query: 66  KPRVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNSTDCKQSSVSSLPFQG- 125
            PRVFSCN+C R+F SSQALGGHQNAH R+R +A+ G+K          S++  LP  G 
Sbjct: 100 DPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKAGAADFGHTYSTMPFLPSHGL 159

Query: 126 FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASGIWPLSENYQSGASP 185
           +N+SLGIQ+HSMI+KP   AP+FG  R   S  W RQPL +Q A G + +    +S  + 
Sbjct: 160 YNKSLGIQVHSMINKPSYQAPIFGLCR---SNGWQRQPLDSQPAIGNFRVGAESESSLAD 219

Query: 186 VLPSSSG------AAGFDGGWRLSSNSDTLLDSKRPHNELHKLDCLDLSLRL 231
            +P            GF GG    S S   L SK+      KL  LDLSL+L
Sbjct: 220 SVPKVGKFSTRVVTEGF-GGHCFGSFSH--LKSKQ-----EKLQKLDLSLKL 258

[Close]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match: gi|568821509|ref|XP_006465202.1| (PREDICTED: zinc finger protein 1 [Citrus sinensis])

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-27
Identity = 102/249 (40.96%), Postives = 133/249 (53.41%), Query Frame = 1 

Query: 14  KDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFF-----SADNLPNDTSH-EGKEAAAKP 73
           ++ +P LV LD SLSNKD      PE LNLID F     S D+L N+  H +G E   +P
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPE-LNLIDCFKSTDSSQDSLENNDIHRQGNET--EP 98

Query: 74  RVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNS----------------TD 133
           RVFSCN+C R+F SSQALGGHQNAH R+R +A+ G ++ T S                T 
Sbjct: 99  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSLAFGHHHNPNSYTH 158

Query: 134 CKQSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVASG 193
               S++SLP  G FNRSLGIQ+HSMIHKP        S  S+    W RQP+  Q A G
Sbjct: 159 RSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIG 218

Query: 194 IWPLSENYQSGASPVLPSSSGAAGFDGGWRLSSNS---------DTLLDSKRPHNELHKL 231
                EN+Q+ A+    S +G + F+   + S  +         D +   K   ++L K 
Sbjct: 219 KLS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK- 278

[Close]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match: gi|567869933|ref|XP_006427588.1| (hypothetical protein CICLE_v10026234mg [Citrus clementina])

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-27
Identity = 102/250 (40.80%), Postives = 133/250 (53.20%), Query Frame = 1 

Query: 14  KDISPGLVSLDPSLSNKDLGGSLMPEELNLIDFF-----SADNLPNDTSH-EGKEAAAKP 73
           ++ +P LV LD SLSNKD      PE LNLID F     S D+L N+  H +G E   +P
Sbjct: 39  QNTNPALV-LDLSLSNKDSNRGSKPE-LNLIDCFKSTDSSQDSLENNDIHRQGNET--EP 98

Query: 74  RVFSCNFCPREFSSSQALGGHQNAHNRKRKMAQTGHKLVTNS-----------------T 133
           RVFSCN+C R+F SSQALGGHQNAH R+R +A+ G ++ T S                 T
Sbjct: 99  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRISTPSSSSSSLAFGHHHNPNSYT 158

Query: 134 DCKQSSVSSLPFQG-FNRSLGIQMHSMIHKPFSHAPVFGSFRSFESKVWDRQPLYTQVAS 193
                S++SLP  G FNRSLGIQ+HSMIHKP        S  S+    W RQP+  Q A 
Sbjct: 159 HRSYPSLASLPLHGSFNRSLGIQVHSMIHKPSFIPSTINSSYSYSQNGWPRQPIDQQPAI 218

Query: 194 GIWPLSENYQSGASPVLPSSSGAAGFDGGWRLSSNS---------DTLLDSKRPHNELHK 231
           G     EN+Q+ A+    S +G + F+   + S  +         D +   K   ++L K
Sbjct: 219 GKLS-QENFQANAAAGSSSINGVSKFENVKKFSPVTEGNIGGYWCDFVSPFKTKQDDLQK 278

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP1_ARATH3.4e-1745.53Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH2.8e-1632.47Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP7_ARATH2.8e-1131.28Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP4_ARATH2.6e-0933.09Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP2_ARATH3.7e-0838.00Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
BLAST of Cp4.1LG12g07330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8M2_CUCSA7.2e-6762.01Uncharacterized protein OS=Cucumis sativus GN=Csa_7G432050 PE=4 SV=1[more]
A0A067DJC5_CITSI1.9e-2740.96Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1[more]
V4S0F0_9ROSI2.5e-2740.80Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1[more]
A0A0A0KVN7_CUCSA3.6e-2643.41Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1[more]
V7AT75_PHAVU6.2e-2640.43Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G160000g PE=4 SV=1[more]
BLAST of Cp4.1LG12g07330 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G10970.11.7e-1933.19 C2H2 and C2HC zinc fingers superfamily protein[more]
AT1G80730.11.9e-1845.53 zinc-finger protein 1[more]
AT5G25160.11.6e-1732.47 zinc finger protein 3[more]
AT1G24625.11.6e-1231.28 zinc finger protein 7[more]
AT1G66140.11.5e-1033.09 zinc finger protein 4[more]
BLAST of Cp4.1LG12g07330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122986|ref|XP_008461428.1|6.0e-6762.39PREDICTED: zinc finger protein 1-like [Cucumis melo][more]
gi|778730464|ref|XP_011659788.1|1.0e-6662.01PREDICTED: zinc finger protein 3-like [Cucumis sativus][more]
gi|951034276|ref|XP_014515964.1|2.7e-2741.81PREDICTED: zinc finger protein 3-like [Vigna radiata var. radiata][more]
gi|568821509|ref|XP_006465202.1|2.7e-2740.96PREDICTED: zinc finger protein 1 [Citrus sinensis][more]
gi|567869933|ref|XP_006427588.1|3.6e-2740.80hypothetical protein CICLE_v10026234mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07330.1Cp4.1LG12g07330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 72..92
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 70..97
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 67..97
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07330Cucsa.105870Cucumber (Gy14) v1cgycpeB0229
Cp4.1LG12g07330Cucsa.162760Cucumber (Gy14) v1cgycpeB0431
Cp4.1LG12g07330CmaCh01G001760Cucurbita maxima (Rimu)cmacpeB465
Cp4.1LG12g07330CmaCh17G008920Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g07330CmoCh01G001840Cucurbita moschata (Rifu)cmocpeB425
Cp4.1LG12g07330Cla022357Watermelon (97103) v1cpewmB142
Cp4.1LG12g07330Cla015329Watermelon (97103) v1cpewmB131
Cp4.1LG12g07330Cla012754Watermelon (97103) v1cpewmB148
Cp4.1LG12g07330Csa7G432050Cucumber (Chinese Long) v2cpecuB161
Cp4.1LG12g07330MELO3C023462Melon (DHL92) v3.5.1cpemeB123
Cp4.1LG12g07330MELO3C011290Melon (DHL92) v3.5.1cpemeB131
Cp4.1LG12g07330ClCG09G003270Watermelon (Charleston Gray)cpewcgB126
Cp4.1LG12g07330ClCG08G013640Watermelon (Charleston Gray)cpewcgB152
Cp4.1LG12g07330CSPI07G20170Wild cucumber (PI 183967)cpecpiB163
Cp4.1LG12g07330CSPI02G23850Wild cucumber (PI 183967)cpecpiB130
Cp4.1LG12g07330Lsi02G026710Bottle gourd (USVL1VR-Ls)cpelsiB113
Cp4.1LG12g07330MELO3C023462.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07330CsaV3_7G031960Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07330CsaV3_2G032400Cucumber (Chinese Long) v3cpecucB0147
Cp4.1LG12g07330Bhi09G000427Wax gourdcpewgoB0201
Cp4.1LG12g07330CsGy7G018450Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07330CsGy2G023590Cucumber (Gy14) v2cgybcpeB177
Cp4.1LG12g07330Carg04202Silver-seed gourdcarcpeB0280
Cp4.1LG12g07330Carg18739Silver-seed gourdcarcpeB0493
Cp4.1LG12g07330Carg13506Silver-seed gourdcarcpeB0631
Cp4.1LG12g07330Carg27704Silver-seed gourdcarcpeB0270
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g07330Cp4.1LG07g03240Cucurbita pepo (Zucchini)cpecpeB191
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g07330Silver-seed gourdcarcpeB1356
Cp4.1LG12g07330Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g07330Cucurbita pepo (Zucchini)cpecpeB181
Cp4.1LG12g07330Cucurbita maxima (Rimu)cmacpeB902
Cp4.1LG12g07330Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g07330Cucurbita moschata (Rifu)cmocpeB839