Lsi07G004080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G004080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Zinc finger protein, putative
Location	chr07 : 4401433 .. 4402248 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGCTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCCAATTCCCAACTGGGTTTGGATCTCAGTCTTTCTAATAACGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTGTTTCGATGTGAATTTAGGAACAGAACCTACAGATACAGAAACAGAGCCAAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGAGGACACCAAAATGCCCACAAGCGAGAAAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTTGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTTAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTCTTCATGTTTCTGCAATTGGGTCATCAGGAATTTATGGTCACAGTGGATGGTCGAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTCAGAGGTATTTCGTCGAACACTGGAGCTGCAAGGTTTGAGGGTGTGAAGAAATTCTCTCCGGCGGCAGTCACGGAGGCGCCACCGCCGCTCGGAGGTTTCTGGTGGGATAGCGGCGGCGGTGGCGGTGGTGGTGGTGGGGGTGGTTTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA

mRNA sequence

ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGCTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCCAATTCCCAACTGGGTTTGGATCTCAGTCTTTCTAATAACGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTGTTTCGATGTGAATTTAGGAACAGAACCTACAGATACAGAAACAGAGCCAAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGAGGACACCAAAATGCCCACAAGCGAGAAAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTTGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTTAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTCTTCATGTTTCTGCAATTGGGTCATCAGGAATTTATGGTCACAGTGGATGGTCGAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTCAGAGGTATTTCGTCGAACACTGGAGCTGCAAGGTTTGAGGGTGTGAAGAAATTCTCTCCGGCGGCAGTCACGGAGGCGCCACCGCCGCTCGGAGGTTTCTGGTGGGATAGCGGCGGCGGTGGCGGTGGTGGTGGTGGGGGTGGTTTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA

Coding sequence (CDS)

ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGCTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCCAATTCCCAACTGGGTTTGGATCTCAGTCTTTCTAATAACGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTGTTTCGATGTGAATTTAGGAACAGAACCTACAGATACAGAAACAGAGCCAAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGAGGACACCAAAATGCCCACAAGCGAGAAAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTTGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTTAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTCTTCATGTTTCTGCAATTGGGTCATCAGGAATTTATGGTCACAGTGGATGGTCGAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTCAGAGGTATTTCGTCGAACACTGGAGCTGCAAGGTTTGAGGGTGTGAAGAAATTCTCTCCGGCGGCAGTCACGGAGGCGCCACCGCCGCTCGGAGGTTTCTGGTGGGATAGCGGCGGCGGTGGCGGTGGTGGTGGTGGGGGTGGTTTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA

Protein sequence

MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL

Homology

[Close]

BLAST of Lsi07G004080 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 7.9e-34
Identity = 109/242 (45.04%), Postives = 132/242 (54.55%), Query Frame = 1


Query: 41  QLGLDLSLSNNDSD-HGSNPELNLIDCFD--VNLGTEPTDTETEPRVFSCNYCQRKFYSS 100
           Q  L+ S+ + + D H S+ ELNLIDC D   ++  E T T TE ++FSCNYCQR FYSS
Sbjct: 15  QDSLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNEST-TSTEQKLFSCNYCQRTFYSS 74

Query: 101 QALGGHQNAHKRERTLAKRTQRV-GSASNFGLAHRYSSLASLPLHGSFS--RSLGIQAHS 160
           QALGGHQNAHKRERTLAKR QR+  SAS FG  H Y   + LP HG ++  RSLGIQAHS
Sbjct: 75  QALGGHQNAHKRERTLAKRGQRMAASASAFG--HPY-GFSPLPFHGQYNNHRSLGIQAHS 134

Query: 161 MVHKPSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRL-----MQGNSHVGSLRGISSNTG 220
           + HK S   S  G  G YG   WSR P DQ PAIG+         + H   +   S N+ 
Sbjct: 135 ISHKLS---SYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSR 194

Query: 221 AARFEGVKKFSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSL 272
           +   +     +   V E  P L  +  D G             L      +E  KLDLSL
Sbjct: 195 SNNIDSPS--NTGRVLEGSPTLEQWHGDKG------------LLLSTSHHEEQQKLDLSL 235

[Close]

BLAST of Lsi07G004080 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 89/213 (41.78%), Postives = 117/213 (54.93%), Query Frame = 1


Query: 25  PCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPELNLIDCFDVNLGT-----EPTDTE 84
           P  KGD+   +I       L+L L+       ++ ELNLID F  +  +        +  
Sbjct: 3   PSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQL 62

Query: 85  TEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVG------SASNFGLAH--- 144
            +PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR Q          +S F   H   
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 145 -RYSSLASLPLHGSFSR--SLGIQAHSMVHKPS-LHVSAIGSSGIYGHSGWSRQPLDQHP 204
            R++S+ASLPLHGS +   +LGIQAHS +HKPS L       S ++      +Q + Q P
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVF------KQSIHQKP 182

Query: 205 AIGRLMQGNSHVGSLRGISSNTGAARFEGVKKF 220
            IG+++    H+      +SN  AA+ E +  F
Sbjct: 183 TIGKMLPEKFHLEVAGNNNSNMVAAKLERIGHF 209

[Close]

BLAST of Lsi07G004080 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-20
Identity = 74/183 (40.44%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIIS----ASESSPPCPKGDRITDQINPNSQLGLD---LSLSNNDS 60
           +D  I   S S +S + S      E   P      ++   N N+ L L+   L+L  + +
Sbjct: 5   LDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSST 64

Query: 61  DHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 120
              SNPE             +        RVFSCNYCQRKFYSSQALGGHQNAHKRERTL
Sbjct: 65  SESSNPEQQ-----------QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 124

Query: 121 AKRTQRV---------GSASNFGLAHRYSSLASLPLHGSFS------RSLGIQAHSMVHK 162
           AKR  R+         GS+SN+  A   ++L+ LPLHGS +      R+LGI+AHS  H 
Sbjct: 125 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 176

[Close]

BLAST of Lsi07G004080 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 1


Query: 48  LSNNDSDHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAH 107
           LS  +S+H S  +L L D F  N  T+ T  E  PRVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 25  LSKPESNHVSL-DLKLNDTF--NDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAH 84

Query: 108 KRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHS-MVH----KPSLH 167
           KRERT+AKR   +G    FG  HR  +          S SLG+QAHS ++H    +P   
Sbjct: 85  KRERTMAKRAMHMGRM--FGHHHRPYTYT--------SSSLGMQAHSGLLHHTLSQPQPL 144

Query: 168 VSAIGSSGIYGHS 176
           VS     G +G++
Sbjct: 145 VSRFHHQGYFGNT 144

[Close]

BLAST of Lsi07G004080 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-14
Identity = 44/87 (50.57%), Postives = 54/87 (62.07%), Query Frame = 1


Query: 39  NSQLGLDLSLSNNDSDHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQ 98
           N QL L+L L  +     S+   N   C +            +PRVFSCNYCQRKFYSSQ
Sbjct: 18  NHQLNLELVLEPSSMSSSSSSSTNSSSCLE------------QPRVFSCNYCQRKFYSSQ 77

Query: 99  ALGGHQNAHKRERTLAKRTQRVGSASN 126
           ALGGHQNAHK ERTLAK+++ +  +SN
Sbjct: 78  ALGGHQNAHKLERTLAKKSRELFRSSN 92

[Close]

BLAST of Lsi07G004080 vs. TrEMBL
Match: A0A0A0KVN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.2e-116
Identity = 221/248 (89.11%), Postives = 225/248 (90.73%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPE 60
           MDFPIPEPSPSETSTIISASESSPPCPKGDR TDQINPNS +GLDL+LSNNDSDHGSNPE
Sbjct: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE 60

Query: 61  LNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120
           LNLIDCFD NL TEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV
Sbjct: 61  LNLIDCFDANLATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120

Query: 121 GSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSAIGSSGIYGHSGWSRQ 180
           GS SNFGLAHRYSSLASLPLHGSF+RSLGIQAHSMVHKPSLHVS IGSSGIYGHSGWSRQ
Sbjct: 121 GSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQ 180

Query: 181 PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVTEAPPPLGGFWWDSGG 240
           PLDQHPAIGRLMQGNSHVGS RGISS TGAARFEGVK+FSP AV E   P    W DSGG
Sbjct: 181 PLDQHPAIGRLMQGNSHVGSHRGISSTTGAARFEGVKRFSPVAVRETGGP-PRRWEDSGG 240

Query: 241 GGGGGGGG 249
              G G G
Sbjct: 241 TAVGVGVG 247

[Close]

BLAST of Lsi07G004080 vs. TrEMBL
Match: A5BQW1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000223 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 4.4e-63
Identity = 160/293 (54.61%), Postives = 189/293 (64.51%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPC------PKG-------DRITDQINPNSQLGLDLS 60
           M+ P  EP  SETS+IIS SE++P        PK        DR  +++  N  L LDLS
Sbjct: 1   MEIPRSEPCLSETSSIISVSEAAPSLNTSMDSPKEGKQQEXQDRNQEELT-NPDLVLDLS 60

Query: 61  LSNNDSDHGSNPELNLIDCFDV----NLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGH 120
           LS+ D + GS PELNLI+ F++    N    P   E EPRVFSCNYCQRKFYSSQALGGH
Sbjct: 61  LSSRDLEQGSRPELNLINSFEMGSSQNQSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGH 120

Query: 121 QNAHKRERTLAKRTQRVGSAS-NFG----LAHRYSSLASLPLHGSFSRSLGIQAHSMVHK 180
           QNAHKRERTLAKR QR+G+AS  FG      +R+SS+ASLPLHGSF+RSLGIQAHS++HK
Sbjct: 121 QNAHKRERTLAKRGQRIGAASVAFGHPLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHK 180

Query: 181 PSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKK 240
           PS       SS +YGH GWSR P+DQ PAIGRL   N HVGS    SS+ GAARFE V+K
Sbjct: 181 PSSL-----SSTLYGHQGWSRLPIDQQPAIGRLAPENYHVGS---SSSSGGAARFETVRK 240

Query: 241 FSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           FS      A   +GG+WW++                +K  QDEL KLDLSLKL
Sbjct: 241 FS----RPASEGIGGYWWNNSN-------------NLKMNQDELQKLDLSLKL 267

[Close]

BLAST of Lsi07G004080 vs. TrEMBL
Match: F6HXT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g09080 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.7e-63
Identity = 160/293 (54.61%), Postives = 189/293 (64.51%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPC------PKG-------DRITDQINPNSQLGLDLS 60
           M+ P  EP  SETS+IIS SE++P        PK        DR  +++  N  L LDLS
Sbjct: 1   MEIPRSEPCLSETSSIISVSEAAPSLNTSMDSPKEGKQQEGQDRNQEELT-NPDLVLDLS 60

Query: 61  LSNNDSDHGSNPELNLIDCFDV----NLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGH 120
           LS+ D + GS PELNLI+ F++    N    P   E EPRVFSCNYCQRKFYSSQALGGH
Sbjct: 61  LSSRDLEQGSRPELNLINSFEMGSSQNHSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGH 120

Query: 121 QNAHKRERTLAKRTQRVGSAS-NFG----LAHRYSSLASLPLHGSFSRSLGIQAHSMVHK 180
           QNAHKRERTLAKR QR+G+AS  FG      +R+SS+ASLPLHGSF+RSLGIQAHS++HK
Sbjct: 121 QNAHKRERTLAKRGQRIGAASVAFGHPLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHK 180

Query: 181 PSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKK 240
           PS       SS +YGH GWSR P+DQ PAIGRL   N HVGS    SS+ GAARFE V+K
Sbjct: 181 PSSL-----SSTLYGHQGWSRLPIDQQPAIGRLAPENYHVGS---SSSSGGAARFETVRK 240

Query: 241 FSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           FS      A   +GG+WW++                +K  QDEL KLDLSLKL
Sbjct: 241 FS----RPASEGIGGYWWNNSN-------------NLKMNQDELQKLDLSLKL 267

[Close]

BLAST of Lsi07G004080 vs. TrEMBL
Match: A0A067DJC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.7e-62
Identity = 155/294 (52.72%), Postives = 180/294 (61.22%), Query Frame = 1


Query: 6   PEPSPSETSTIISASESSPPC------PKGDRITDQINPNSQLGLDLSLSNNDSDHGSNP 65
           P+  PSETS+ IS S ++  C       +G ++  Q N N  L LDLSLSN DS+ GS P
Sbjct: 4   PKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQ-NTNPALVLDLSLSNKDSNRGSKP 63

Query: 66  ELNLIDCFDVNLGTEPT---------DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 125
           ELNLIDCF     ++ +           ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE
Sbjct: 64  ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 123

Query: 126 RTLAKRTQRVGSASN-----FGLAHR--------YSSLASLPLHGSFSRSLGIQAHSMVH 185
           RTLAKR QR+ + S+     FG  H         Y SLASLPLHGSF+RSLGIQ HSM+H
Sbjct: 124 RTLAKRGQRISTPSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMIH 183

Query: 186 KPSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVK 245
           KPS   S I SS  Y  +GW RQP+DQ PAIG+L Q N    +  G SS  G ++FE VK
Sbjct: 184 KPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENVK 243

Query: 246 KFSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           KFSP  VTE    +GG+W D                  K KQD+L KLDLSLKL
Sbjct: 244 KFSP--VTEG--NIGGYWCDFVS-------------PFKTKQDDLQKLDLSLKL 279

[Close]

BLAST of Lsi07G004080 vs. TrEMBL
Match: V4S0F0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62
Identity = 155/295 (52.54%), Postives = 180/295 (61.02%), Query Frame = 1


Query: 6   PEPSPSETSTIISASESSPPC------PKGDRITDQINPNSQLGLDLSLSNNDSDHGSNP 65
           P+  PSETS+ IS S ++  C       +G ++  Q N N  L LDLSLSN DS+ GS P
Sbjct: 4   PKSEPSETSSFISVSNAAHSCIIKPSEKEGQKVQRQ-NTNPALVLDLSLSNKDSNRGSKP 63

Query: 66  ELNLIDCFDVNLGTEPT---------DTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 125
           ELNLIDCF     ++ +           ETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE
Sbjct: 64  ELNLIDCFKSTDSSQDSLENNDIHRQGNETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 123

Query: 126 RTLAKRTQRVGSASN------FGLAHR--------YSSLASLPLHGSFSRSLGIQAHSMV 185
           RTLAKR QR+ + S+      FG  H         Y SLASLPLHGSF+RSLGIQ HSM+
Sbjct: 124 RTLAKRGQRISTPSSSSSSLAFGHHHNPNSYTHRSYPSLASLPLHGSFNRSLGIQVHSMI 183

Query: 186 HKPSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGV 245
           HKPS   S I SS  Y  +GW RQP+DQ PAIG+L Q N    +  G SS  G ++FE V
Sbjct: 184 HKPSFIPSTINSSYSYSQNGWPRQPIDQQPAIGKLSQENFQANAAAGSSSINGVSKFENV 243

Query: 246 KKFSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           KKFSP  VTE    +GG+W D                  K KQD+L KLDLSLKL
Sbjct: 244 KKFSP--VTEG--NIGGYWCDFVS-------------PFKTKQDDLQKLDLSLKL 280

[Close]

BLAST of Lsi07G004080 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36
Identity = 119/292 (40.75%), Postives = 152/292 (52.05%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASES-----SPPCPKGDRITDQINPNSQ-----------LGL 60
           MD    +P  S++S IISAS S     SP     +   D +    +           + L
Sbjct: 1   MDSSSGKPRSSDSSCIISASTSLQFSDSPKLSLENYNIDTVAAQEEDDHDQKEGVEGIKL 60

Query: 61  DLSLSNNDSDHGS-NPELNLIDCFDVNLGTEPTD--TETEPRVFSCNYCQRKFYSSQALG 120
           DL L+  DS     N ELNL+DC +  + T   +  T TE ++FSCNYCQR FYSSQALG
Sbjct: 61  DLMLAGYDSSQPQLNQELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALG 120

Query: 121 GHQNAHKRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFS-RSLGIQAHSMVHKPS 180
           GHQNAHKRERTLAKR QR+ SA+ FG  H Y   A +P HG +S R+LGIQAHSM HKPS
Sbjct: 121 GHQNAHKRERTLAKRGQRMASAAAFG--HPY-GFAPVPFHGQYSNRTLGIQAHSMSHKPS 180

Query: 181 LHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFS 240
            + +  G  G YG   WSR PL Q PAI +L    +H    + + +    +  E + +F 
Sbjct: 181 SY-NVYG--GEYGQINWSRIPLVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFD 240

Query: 241 PAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLK-LDLSLKL 272
              +    P      W  G               +KP ++E  K LDLSLKL
Sbjct: 241 VGRIPVEFPT--SELWQRG------------EELLKPAEEEKQKNLDLSLKL 272

[Close]

BLAST of Lsi07G004080 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-35
Identity = 109/242 (45.04%), Postives = 132/242 (54.55%), Query Frame = 1


Query: 41  QLGLDLSLSNNDSD-HGSNPELNLIDCFD--VNLGTEPTDTETEPRVFSCNYCQRKFYSS 100
           Q  L+ S+ + + D H S+ ELNLIDC D   ++  E T T TE ++FSCNYCQR FYSS
Sbjct: 15  QDSLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNEST-TSTEQKLFSCNYCQRTFYSS 74

Query: 101 QALGGHQNAHKRERTLAKRTQRV-GSASNFGLAHRYSSLASLPLHGSFS--RSLGIQAHS 160
           QALGGHQNAHKRERTLAKR QR+  SAS FG  H Y   + LP HG ++  RSLGIQAHS
Sbjct: 75  QALGGHQNAHKRERTLAKRGQRMAASASAFG--HPY-GFSPLPFHGQYNNHRSLGIQAHS 134

Query: 161 MVHKPSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRL-----MQGNSHVGSLRGISSNTG 220
           + HK S   S  G  G YG   WSR P DQ PAIG+         + H   +   S N+ 
Sbjct: 135 ISHKLS---SYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSR 194

Query: 221 AARFEGVKKFSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSL 272
           +   +     +   V E  P L  +  D G             L      +E  KLDLSL
Sbjct: 195 SNNIDSPS--NTGRVLEGSPTLEQWHGDKG------------LLLSTSHHEEQQKLDLSL 235

[Close]

BLAST of Lsi07G004080 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 89/213 (41.78%), Postives = 117/213 (54.93%), Query Frame = 1


Query: 25  PCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPELNLIDCFDVNLGT-----EPTDTE 84
           P  KGD+   +I       L+L L+       ++ ELNLID F  +  +        +  
Sbjct: 3   PSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQL 62

Query: 85  TEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVG------SASNFGLAH--- 144
            +PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR Q          +S F   H   
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSV 122

Query: 145 -RYSSLASLPLHGSFSR--SLGIQAHSMVHKPS-LHVSAIGSSGIYGHSGWSRQPLDQHP 204
            R++S+ASLPLHGS +   +LGIQAHS +HKPS L       S ++      +Q + Q P
Sbjct: 123 SRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVF------KQSIHQKP 182

Query: 205 AIGRLMQGNSHVGSLRGISSNTGAARFEGVKKF 220
            IG+++    H+      +SN  AA+ E +  F
Sbjct: 183 TIGKMLPEKFHLEVAGNNNSNMVAAKLERIGHF 209

[Close]

BLAST of Lsi07G004080 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 74/183 (40.44%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIIS----ASESSPPCPKGDRITDQINPNSQLGLD---LSLSNNDS 60
           +D  I   S S +S + S      E   P      ++   N N+ L L+   L+L  + +
Sbjct: 5   LDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLPLSST 64

Query: 61  DHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 120
              SNPE             +        RVFSCNYCQRKFYSSQALGGHQNAHKRERTL
Sbjct: 65  SESSNPEQQ-----------QQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 124

Query: 121 AKRTQRV---------GSASNFGLAHRYSSLASLPLHGSFS------RSLGIQAHSMVHK 162
           AKR  R+         GS+SN+  A   ++L+ LPLHGS +      R+LGI+AHS  H 
Sbjct: 125 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 176

[Close]

BLAST of Lsi07G004080 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 94.7 bits (234), Expect = 9.1e-20
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 1


Query: 48  LSNNDSDHGSNPELNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAH 107
           LS  +S+H S  +L L D F  N  T+ T  E  PRVFSCNYC+RKFYSSQALGGHQNAH
Sbjct: 25  LSKPESNHVSL-DLKLNDTF--NDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAH 84

Query: 108 KRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHS-MVH----KPSLH 167
           KRERT+AKR   +G    FG  HR  +          S SLG+QAHS ++H    +P   
Sbjct: 85  KRERTMAKRAMHMGRM--FGHHHRPYTYT--------SSSLGMQAHSGLLHHTLSQPQPL 144

Query: 168 VSAIGSSGIYGHS 176
           VS     G +G++
Sbjct: 145 VSRFHHQGYFGNT 144

[Close]

BLAST of Lsi07G004080 vs. NCBI nr
Match: gi|659108987|ref|XP_008454489.1| (PREDICTED: zinc finger protein 3-like [Cucumis melo])

HSP 1 Score: 512.3 bits (1318), Expect = 5.2e-142
Identity = 256/271 (94.46%), Postives = 261/271 (96.31%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPE 60
           MDFPIPEPSPSETSTIISASESSPPCP+GDR TDQINPNS +GLDLSLSNNDSDHGSNPE
Sbjct: 1   MDFPIPEPSPSETSTIISASESSPPCPRGDRTTDQINPNSHMGLDLSLSNNDSDHGSNPE 60

Query: 61  LNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120
           LNLIDCFD NL TEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV
Sbjct: 61  LNLIDCFDANLATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120

Query: 121 GSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSAIGSSGIYGHSGWSRQ 180
           GS SNFGLAHRYSSLASLPLHGSF+RSLGIQAHSMVHKPSLHVS IGSSGIYGHSGWSRQ
Sbjct: 121 GSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQ 180

Query: 181 PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVTEAPPPLGGFWWDSGG 240
           PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVK+FSP AVTEA P LGGFWWD GG
Sbjct: 181 PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKRFSPVAVTEASPSLGGFWWD-GG 240

Query: 241 GGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           GGGGGGGGGFSH+KMKPKQDELLKLDLSLKL
Sbjct: 241 GGGGGGGGGFSHMKMKPKQDELLKLDLSLKL 270

[Close]

BLAST of Lsi07G004080 vs. NCBI nr
Match: gi|778689686|ref|XP_004152329.2| (PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus])

HSP 1 Score: 500.7 bits (1288), Expect = 1.6e-138
Identity = 252/273 (92.31%), Postives = 257/273 (94.14%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPE 60
           MDFPIPEPSPSETSTIISASESSPPCPKGDR TDQINPNS +GLDL+LSNNDSDHGSNPE
Sbjct: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE 60

Query: 61  LNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120
           LNLIDCFD NL TEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV
Sbjct: 61  LNLIDCFDANLATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120

Query: 121 GSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSAIGSSGIYGHSGWSRQ 180
           GS SNFGLAHRYSSLASLPLHGSF+RSLGIQAHSMVHKPSLHVS IGSSGIYGHSGWSRQ
Sbjct: 121 GSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQ 180

Query: 181 PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVTE--APPPLGGFWWDS 240
           PLDQHPAIGRLMQGNSHVGS RGISS TGAARFEGVK+FSP AV E   PPPLGGFWWD 
Sbjct: 181 PLDQHPAIGRLMQGNSHVGSHRGISSTTGAARFEGVKRFSPVAVRETGGPPPLGGFWWD- 240

Query: 241 GGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
             GGGGGGGGGFSH+KMKPKQDELLKLDLSLKL
Sbjct: 241 --GGGGGGGGGFSHMKMKPKQDELLKLDLSLKL 270

[Close]

BLAST of Lsi07G004080 vs. NCBI nr
Match: gi|700197786|gb|KGN52944.1| (hypothetical protein Csa_4G006510 [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 221/248 (89.11%), Postives = 225/248 (90.73%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNNDSDHGSNPE 60
           MDFPIPEPSPSETSTIISASESSPPCPKGDR TDQINPNS +GLDL+LSNNDSDHGSNPE
Sbjct: 1   MDFPIPEPSPSETSTIISASESSPPCPKGDRTTDQINPNSHMGLDLTLSNNDSDHGSNPE 60

Query: 61  LNLIDCFDVNLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120
           LNLIDCFD NL TEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV
Sbjct: 61  LNLIDCFDANLATEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRV 120

Query: 121 GSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSAIGSSGIYGHSGWSRQ 180
           GS SNFGLAHRYSSLASLPLHGSF+RSLGIQAHSMVHKPSLHVS IGSSGIYGHSGWSRQ
Sbjct: 121 GSGSNFGLAHRYSSLASLPLHGSFNRSLGIQAHSMVHKPSLHVSPIGSSGIYGHSGWSRQ 180

Query: 181 PLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVTEAPPPLGGFWWDSGG 240
           PLDQHPAIGRLMQGNSHVGS RGISS TGAARFEGVK+FSP AV E   P    W DSGG
Sbjct: 181 PLDQHPAIGRLMQGNSHVGSHRGISSTTGAARFEGVKRFSPVAVRETGGP-PRRWEDSGG 240

Query: 241 GGGGGGGG 249
              G G G
Sbjct: 241 TAVGVGVG 247

[Close]

BLAST of Lsi07G004080 vs. NCBI nr
Match: gi|720030983|ref|XP_010265671.1| (PREDICTED: zinc finger protein 1-like [Nelumbo nucifera])

HSP 1 Score: 250.0 bits (637), Expect = 4.8e-63
Identity = 157/286 (54.90%), Postives = 177/286 (61.89%), Query Frame = 1


Query: 7   EPSPSETSTIISASESSPPCP------KGDRI------TDQINPNSQLGLDLSLSNNDSD 66
           EP  SETS+IIS  E+ P         KG+R       T Q   N  L LDLSLS+ DS 
Sbjct: 7   EPCLSETSSIISVPEAQPSLDGSEKQQKGERQQPEGEETLQEETNPDLLLDLSLSHKDSS 66

Query: 67  HGSNPELNLIDCFDVNLGTE----PTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 126
           HGS PELNLIDC  V         P  TE EPRVFSCNYCQRKFYSSQALGGHQNAHKRE
Sbjct: 67  HGSKPELNLIDCLSVGASETSPEIPQGTEAEPRVFSCNYCQRKFYSSQALGGHQNAHKRE 126

Query: 127 RTLAKRTQRVG-SASNFGLA----HRYSSLASLPLHGSFSRSLGIQAHSMVHKPSLHVSA 186
           RTLAKR  R+G +A+ FG +    HR+SSLASLPLHGSFSRSLGIQ HSM+HKPS H   
Sbjct: 127 RTLAKRGHRMGAAAAAFGHSQSHYHRFSSLASLPLHGSFSRSLGIQVHSMIHKPSGH--- 186

Query: 187 IGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKKFSPAAVT 246
                +YGH  WSR P++Q PAIGRL   + HVG   G SS  GAARF+  + FSP    
Sbjct: 187 -----LYGHHEWSRSPINQQPAIGRLAMTDYHVGVSAGSSSRGGAARFDTSRMFSP---- 246

Query: 247 EAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
                + G+WW + GG             MK  Q+EL KLDLSLKL
Sbjct: 247 PMEEGISGYWWAASGG-------------MKTNQEELQKLDLSLKL 267

[Close]

BLAST of Lsi07G004080 vs. NCBI nr
Match: gi|147832714|emb|CAN74885.1| (hypothetical protein VITISV_000223 [Vitis vinifera])

HSP 1 Score: 249.6 bits (636), Expect = 6.2e-63
Identity = 160/293 (54.61%), Postives = 189/293 (64.51%), Query Frame = 1


Query: 1   MDFPIPEPSPSETSTIISASESSPPC------PKG-------DRITDQINPNSQLGLDLS 60
           M+ P  EP  SETS+IIS SE++P        PK        DR  +++  N  L LDLS
Sbjct: 1   MEIPRSEPCLSETSSIISVSEAAPSLNTSMDSPKEGKQQEXQDRNQEELT-NPDLVLDLS 60

Query: 61  LSNNDSDHGSNPELNLIDCFDV----NLGTEPTDTETEPRVFSCNYCQRKFYSSQALGGH 120
           LS+ D + GS PELNLI+ F++    N    P   E EPRVFSCNYCQRKFYSSQALGGH
Sbjct: 61  LSSRDLEQGSRPELNLINSFEMGSSQNQSEIPQGNEGEPRVFSCNYCQRKFYSSQALGGH 120

Query: 121 QNAHKRERTLAKRTQRVGSAS-NFG----LAHRYSSLASLPLHGSFSRSLGIQAHSMVHK 180
           QNAHKRERTLAKR QR+G+AS  FG      +R+SS+ASLPLHGSF+RSLGIQAHS++HK
Sbjct: 121 QNAHKRERTLAKRGQRIGAASVAFGHPLPNPYRFSSMASLPLHGSFNRSLGIQAHSLIHK 180

Query: 181 PSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFEGVKK 240
           PS       SS +YGH GWSR P+DQ PAIGRL   N HVGS    SS+ GAARFE V+K
Sbjct: 181 PSSL-----SSTLYGHQGWSRLPIDQQPAIGRLAPENYHVGS---SSSSGGAARFETVRK 240

Query: 241 FSPAAVTEAPPPLGGFWWDSGGGGGGGGGGGFSHLKMKPKQDELLKLDLSLKL 272
           FS      A   +GG+WW++                +K  QDEL KLDLSLKL
Sbjct: 241 FS----RPASEGIGGYWWNNSN-------------NLKMNQDELQKLDLSLKL 267

The following BLAST results are available for this feature:

BLAST of Lsi07G004080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZFP3_ARATH	7.9e-34	45.04	Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1	[more]
ZFP1_ARATH	2.0e-29	41.78	Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1	[more]
ZFP4_ARATH	3.8e-20	40.44	Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2	[more]
ZFP7_ARATH	1.6e-18	48.87	Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1	[more]
ZFP2_ARATH	1.8e-14	50.57	Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1	[more]

BLAST of Lsi07G004080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVN7_CUCSA	1.2e-116	89.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006510 PE=4 SV=1	[more]
A5BQW1_VITVI	4.4e-63	54.61	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000223 PE=4 SV=1	[more]
F6HXT4_VITVI	5.7e-63	54.61	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g09080 PE=4 SV=...	[more]
A0A067DJC5_CITSI	1.7e-62	52.72	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043134mg PE=4 SV=1	[more]
V4S0F0_9ROSI	2.2e-62	52.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026234mg PE=4 SV=1	[more]

BLAST of Lsi07G004080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G10970.1	3.1e-36	40.75	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	4.5e-35	45.04	zinc finger protein 3	[more]
AT1G80730.1	1.1e-30	41.78	zinc-finger protein 1	[more]
AT1G66140.1	2.2e-21	40.44	zinc finger protein 4	[more]
AT1G24625.1	9.1e-20	48.87	zinc finger protein 7	[more]

BLAST of Lsi07G004080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108987\|ref\|XP_008454489.1\|	5.2e-142	94.46	PREDICTED: zinc finger protein 3-like [Cucumis melo]	[more]
gi\|778689686\|ref\|XP_004152329.2\|	1.6e-138	92.31	PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 3-like [Cucumis sativus]	[more]
gi\|700197786\|gb\|KGN52944.1\|	1.7e-116	89.11	hypothetical protein Csa_4G006510 [Cucumis sativus]	[more]
gi\|720030983\|ref\|XP_010265671.1\|	4.8e-63	54.90	PREDICTED: zinc finger protein 1-like [Nelumbo nucifera]	[more]
gi\|147832714\|emb\|CAN74885.1\|	6.2e-63	54.61	hypothetical protein VITISV_000223 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G004080.1	Lsi07G004080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 87..107 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 85..112 score: 11
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 81..112 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G004080	Csa4G006510	Cucumber (Chinese Long) v2	culsiB312
Lsi07G004080	CSPI07G20170	Wild cucumber (PI 183967)	cpilsiB546
Lsi07G004080	CSPI04G02070	Wild cucumber (PI 183967)	cpilsiB311
Lsi07G004080	Cucsa.105870	Cucumber (Gy14) v1	cgylsiB136
Lsi07G004080	Cucsa.095930	Cucumber (Gy14) v1	cgylsiB113
Lsi07G004080	CmaCh01G001760	Cucurbita maxima (Rimu)	cmalsiB450
Lsi07G004080	CmaCh14G013830	Cucurbita maxima (Rimu)	cmalsiB256
Lsi07G004080	CmoCh01G001840	Cucurbita moschata (Rifu)	cmolsiB437
Lsi07G004080	CmoCh14G014200	Cucurbita moschata (Rifu)	cmolsiB244
Lsi07G004080	Cla012754	Watermelon (97103) v1	lsiwmB438
Lsi07G004080	MELO3C023462	Melon (DHL92) v3.5.1	lsimeB430
Lsi07G004080	MELO3C017834	Melon (DHL92) v3.5.1	lsimeB447
Lsi07G004080	ClCG09G003270	Watermelon (Charleston Gray)	lsiwcgB387
Lsi07G004080	ClCG07G012130	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G004080	MELO3C017834.2	Melon (DHL92) v3.6.1	lsimedB465
Lsi07G004080	Cla97C09G165510	Watermelon (97103) v2	lsiwmbB420
Lsi07G004080	Cla97C07G138870	Watermelon (97103) v2	lsiwmbB405
Lsi07G004080	Bhi01G002816	Wax gourd	lsiwgoB558
Lsi07G004080	Cp4.1LG03g13450	Cucurbita pepo (Zucchini)	cpelsiB516
Lsi07G004080	CsGy4G002000	Cucumber (Gy14) v2	cgyblsiB285
Lsi07G004080	Carg04202	Silver-seed gourd	carlsiB182
Lsi07G004080	Carg06536	Silver-seed gourd	carlsiB109
Lsi07G004080	CsaV3_4G002030	Cucumber (Chinese Long) v3	cuclsiB331

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi07G004080	Lsi02G026710	Bottle gourd (USVL1VR-Ls)	lsilsiB117

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G004080	Cucurbita maxima (Rimu)	cmalsiB773
Lsi07G004080	Cucurbita pepo (Zucchini)	cpelsiB472