CsaV3_UNG148160 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG148160
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDUF740 domain-containing protein
Locationscaffold66 : 319180 .. 319578 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATCGGAATCGGCCAAAGAATGTAAGAGACACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTTCGAGAAAAGCTTCAACAATTTCATCAATCTCCCAACTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGCCGCCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGACTTGTTAGCGGACAAGCTGAAGAAGACCGGTTCCATTAGGATCTCTACCGATGGCGGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGGTTGTTGCTCCGCCCAAAAGCTCTGTATTTTAGTTGA

mRNA sequence

ATGGGGAAATCGGAATCGGCCAAAGAATGTAAGAGACACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTTCGAGAAAAGCTTCAACAATTTCATCAATCTCCCAACTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGCCGCCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGACTTGTTAGCGGACAAGCTGAAGAAGACCGGTTCCATTAGGATCTCTACCGATGGCGGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGGTTGTTGCTCCGCCCAAAAGCTCTGTATTTTAGTTGA

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCCAAAGAATGTAAGAGACACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTTCGAGAAAAGCTTCAACAATTTCATCAATCTCCCAACTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGCCGCCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGACTTGTTAGCGGACAAGCTGAAGAAGACCGGTTCCATTAGGATCTCTACCGATGGCGGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGGTTGTTGCTCCGCCCAAAAGCTCTGTATTTTAGTTGA

Protein sequence

MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFSADSSRRHRRHHRRNASEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWSRLLLRPKALYFS
Homology
[Close]
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match: XP_011653117.1 (PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hypothetical protein Csa_4G026920 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS 120
           XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS
Sbjct: 61  XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS 120

Query: 121 RLLLRPKALYFS 133
           RLLLRPKALYFS
Sbjct: 121 RLLLRPKALYFS 132

[Close]
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match: XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 8.6e-46
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTF-XXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQSPNYSDSQSTF XXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKK+GSIRIS DG TGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120

Query: 121 SRLLLRPKALYFS 133
           SRLLLRPKALYFS
Sbjct: 121 SRLLLRPKALYFS 133

[Close]
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match: XP_022929275.1 (uncharacterized protein LOC111435907 [Cucurbita moschata])

HSP 1 Score: 134.4 bits (337), Expect = 2.8e-28
Identity = 75/132 (56.82%), Postives = 83/132 (62.88%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFXXXXXXXXXXXX 60
           MGKSESAKECKRH NHN LPGICPSCLRE+LQQ  QS  +Y+DS+ST             
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRST--SSSSFLKSSES 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120
                           SE  TGSMA DL  DK+KK+ SIRIS DGG      GKKK+GFW
Sbjct: 61  FFSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGG-----GGKKKVGFW 120

Query: 121 SRLLLRPKALYF 132
           SR L+RPKALYF
Sbjct: 121 SRFLVRPKALYF 125

[Close]
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match: XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 69/133 (51.88%), Postives = 75/133 (56.39%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSP--NYSDSQSTFXXXXXXXXXXX 60
           MGKSESAKECKRH NHN LPGICPSCLRE+LQQ  QS   NYSDS+ST            
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRST--SSSSFLKSSE 115

Query: 61  XXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGF 120
                            SE VTGSMA DL  DK+KK+ SIR                +GF
Sbjct: 116 SFFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRXXXXXXXXXXXXXXXXVGF 175

Query: 121 WSRLLLRPKALYF 132
           WSR L+RPKALYF
Sbjct: 176 WSRFLVRPKALYF 186

[Close]
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match: XP_023553119.1 (uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 114.4 bits (285), Expect = 3.0e-22
Identity = 67/132 (50.76%), Postives = 75/132 (56.82%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFXXXXXXXXXXXX 60
           MGKSESA+ECKRH NHN LPGICPSCLRE+LQQ  QS  +YSDS+ST             
Sbjct: 1   MGKSESARECKRHQNHNQLPGICPSCLRERLQQLQQSSISYSDSRST--SSSSFLKSSES 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120
                           SE VTGSMA DL  DK+KK+ SIR                +GFW
Sbjct: 61  FFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIR-XXXXXXXXXXXXXXXVGFW 120

Query: 121 SRLLLRPKALYF 132
           SR L+RPKALYF
Sbjct: 121 SRFLVRPKALYF 129

[Close]
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match: tr|A0A0A0KZB2|A0A0A0KZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.5e-50
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS 120
           XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS
Sbjct: 61  XXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFWS 120

Query: 121 RLLLRPKALYFS 133
           RLLLRPKALYFS
Sbjct: 121 RLLLRPKALYFS 132

[Close]
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match: tr|A0A1S3BWL8|A0A1S3BWL8_CUCME (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.7e-46
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTF-XXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQSPNYSDSQSTF XXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKK+GSIRIS DG TGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120

Query: 121 SRLLLRPKALYFS 133
           SRLLLRPKALYFS
Sbjct: 121 SRLLLRPKALYFS 133

[Close]
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match: tr|A0A2I4GV67|A0A2I4GV67_9ROSI (uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05
Identity = 42/129 (32.56%), Postives = 53/129 (41.09%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSES + CK+H N   LPG+C SCLREKL Q + S +   +   F             
Sbjct: 1   MGKSESQQGCKQHQNEKQLPGVCSSCLREKLSQLNASASNMKTTGGFGYFGSSSPNSSSA 60

Query: 61  XXXXXXXXXXXXXXXSEFVTGSMAVDLLAD-----KLKKTGSIR-ISTDGGTGAGVKGKK 120
                                  ++ L         LKK+ SI  +S      A   GKK
Sbjct: 61  SSSIFVSPIYGRHHRRALEKTGSSISLTLKVGHDYGLKKSRSIAFVSRSLHEEAAGSGKK 120

Query: 121 KLGFWSRLL 124
           K GFWS+LL
Sbjct: 121 KGGFWSKLL 129

[Close]
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match: tr|A0A067K3Z2|A0A067K3Z2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18663 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-05
Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQS---------TFXXXX 60
           MG SE  + CK HP HN   G+CPSCLREKL + + +P  +D ++           XXXX
Sbjct: 1   MGFSEFQQACKEHPYHNHKQGVCPSCLREKLSKLYVAP-LNDKEAXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSEFVTG-SMAVDLLADKLKKTGSIRISTDGGTGAGV 120
           XXXXXXXXXXXXXXXXXXXXXX  S+ +   S  V +  + LKK+ S+   T+G  G   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXNVSDIMHSISFRVSIAGNGLKKSRSLAFVTEGKNG--- 120

Query: 121 KGKKKLGFWSRLL 124
           K K K GFWS+LL
Sbjct: 121 KKKNKKGFWSKLL 129

[Close]
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match: tr|A0A1J6I869|A0A1J6I869_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_23602 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 45/128 (35.16%), Postives = 55/128 (42.97%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSD-----SQSTFXXXXXXXX 60
           M  SE    CK+HP H   PG+C  CLREKL + + +    D     S S  XXXX    
Sbjct: 1   MAFSEPEVICKKHPQHKQQPGVCSCCLREKLSKINGTSTIMDALASISSSLXXXXXSSNC 60

Query: 61  XXXXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKK 120
                                 FVT  +A       LKK+ SI     GG   G+ GKKK
Sbjct: 61  MSPRGAIGHRRITSDVTGGHYSFVT--LAGGGAGGGLKKSRSIAFVARGGR-VGINGKKK 120

Query: 121 LGFWSRLL 124
            GFWS+L+
Sbjct: 121 EGFWSKLI 125

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG148160 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653117.11.3e-49100.00PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hy... [more]
XP_008453802.18.6e-4696.24PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo][more]
XP_022929275.12.8e-2856.82uncharacterized protein LOC111435907 [Cucurbita moschata][more]
XP_022985135.11.9e-2451.88uncharacterized protein LOC111483218, partial [Cucurbita maxima][more]
XP_023553119.13.0e-2250.76uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_UNG148160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG148160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG148160 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KZB2|A0A0A0KZB2_CUCSA8.5e-50100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1[more]
tr|A0A1S3BWL8|A0A1S3BWL8_CUCME5.7e-4696.24uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=... [more]
tr|A0A2I4GV67|A0A2I4GV67_9ROSI2.2e-0532.56uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 P... [more]
tr|A0A067K3Z2|A0A067K3Z2_JATCU6.4e-0550.38Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18663 PE=4 SV=1[more]
tr|A0A1J6I869|A0A1J6I869_NICAT1.1e-0435.16Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_23602 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008004UPF0503
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG148160.1CsaV3_UNG148160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008004Uncharacterised protein family UPF0503PFAMPF05340DUF740coord: 6..78
e-value: 7.4E-9
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..75
NoneNo IPR availablePANTHERPTHR34046FAMILY NOT NAMEDcoord: 1..123
NoneNo IPR availablePANTHERPTHR34046:SF1SUBFAMILY NOT NAMEDcoord: 1..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG148160CSPI04G04570Wild cucumber (PI 183967)cpicucB229
CsaV3_UNG148160Cucsa.093660Cucumber (Gy14) v1cgycucB104
CsaV3_UNG148160CmoCh16G007510Cucurbita moschata (Rifu)cmocucB0395
CsaV3_UNG148160Cp4.1LG01g09310Cucurbita pepo (Zucchini)cpecucB0515
CsaV3_UNG148160Cp4.1LG14g01110Cucurbita pepo (Zucchini)cpecucB0272
CsaV3_UNG148160CsGy4G004480Cucumber (Gy14) v2cgybcucB180
CsaV3_UNG148160Carg14205Silver-seed gourdcarcucB0984
CsaV3_UNG148160Carg05803Silver-seed gourdcarcucB1064
CsaV3_UNG148160Cla010663Watermelon (97103) v1cucwmB379
CsaV3_UNG148160MELO3C017596Melon (DHL92) v3.5.1cucmeB346
CsaV3_UNG148160ClCG07G017490Watermelon (Charleston Gray)cucwcgB354
CsaV3_UNG148160Lsi07G001630Bottle gourd (USVL1VR-Ls)cuclsiB341
CsaV3_UNG148160MELO3C017596.2Melon (DHL92) v3.6.1cucmedB338
CsaV3_UNG148160Cla97C07G144550Watermelon (97103) v2cucwmbB345
CsaV3_UNG148160Bhi01G001948Wax gourdcucwgoB438
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG148160Wax gourdcucwgoB439
CsaV3_UNG148160Cucumber (Chinese Long) v3cuccucB168
CsaV3_UNG148160Cucumber (Chinese Long) v3cuccucB192
CsaV3_UNG148160Cucumber (Chinese Long) v3cuccucB193
CsaV3_UNG148160Silver-seed gourdcarcucB0983
CsaV3_UNG148160Cucumber (Gy14) v1cgycucB103
CsaV3_UNG148160Cucurbita maxima (Rimu)cmacucB0399
CsaV3_UNG148160Cucurbita maxima (Rimu)cmacucB0857
CsaV3_UNG148160Cucurbita moschata (Rifu)cmocucB0843
CsaV3_UNG148160Cucurbita pepo (Zucchini)cpecucB0514
CsaV3_UNG148160Watermelon (Charleston Gray)cucwcgB356
CsaV3_UNG148160Watermelon (97103) v1cucwmB378
CsaV3_UNG148160Watermelon (97103) v2cucwmbB346