MELO3C017596.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C017596.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAvr9/Cf-9 rapidly elicited protein, putative
Locationchr07 : 25574634 .. 25575538 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGACGACACTCTGTCTTTGTTTTCTCTTTGTTTTTATATCCCAACTCACAATAAAAACAGAGACAAAAAGTAACAAAAAAGCAAAAGAAAGAAGAAAACAGAGAGGAAAACACAATCAATCAACTTTGTTTTGAAGAACCATGGGGAAATCGGAATCGGCGAAAGAATGTAAGAGACACCCAAATTACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTACGAGAAAAGCTTCAACAATTTCATCAATCTCCCAATTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGTCGCCACCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGATTTGTTAGCGGACAAGCTGAAGAAGAGCGGTTCCATTAGGATCTCAGCCGATGGGAGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGGTTGTTGCTCCGCCCAAAAGCTCTTTATTTTAGTTGATTATTCATCATGTATAAGATTTTATTTAGTAAATGAATTAGAATTTTTCTCTTTGTTCTTTAATTGCTTCATAATTTCTTTGAATTTATATATATTTTAAAAAAAAAATTGGATAGAGGAAGAAGAAGAGTTTGTTCTTGTAATGAATTAAAGAAAAAGAAAAAGAAAAAGAAAAAGATGAATCCCAATGGAGAGGGTTTGGTTAGTTGAACAAAGGGTACGAAGGAGTCAACATATTATTAATGCAAATTCACCTAATTTTGCAACTTATTGCTTTTTGGTTTATGAAAGATCAAGGGTCAATAACATATTGATATATTATGGAGACTTGTAAAATAAAATAAAGGCAAACTTGAACATTGG

mRNA sequence

GGACGACACTCTGTCTTTGTTTTCTCTTTGTTTTTATATCCCAACTCACAATAAAAACAGAGACAAAAAGTAACAAAAAAGCAAAAGAAAGAAGAAAACAGAGAGGAAAACACAATCAATCAACTTTGTTTTGAAGAACCATGGGGAAATCGGAATCGGCGAAAGAATGTAAGAGACACCCAAATTACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTACGAGAAAAGCTTCAACAATTTCATCAATCTCCCAATTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGTCGCCACCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGATTTGTTAGCGGACAAGCTGAAGAAGAGCGGTTCCATTAGGATCTCAGCCGATGGGAGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGAGGAAGAAGAAGAGTTTGTTCTTGTAATGAATTAAAGAAAAAGAAAAAGAAAAAGAAAAAGATGAATCCCAATGGAGAGGGTTTGGTTAGTTGAACAAAGGGTACGAAGGAGTCAACATATTATTAATGCAAATTCACCTAATTTTGCAACTTATTGCTTTTTGGTTTATGAAAGATCAAGGGTCAATAACATATTGATATATTATGGAGACTTGTAAAATAAAATAAAGGCAAACTTGAACATTGG

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCGAAAGAATGTAAGAGACACCCAAATTACAATCTCTTACCCGGAATTTGCCCTTCTTGTCTACGAGAAAAGCTTCAACAATTTCATCAATCTCCCAATTATTCCGATTCTCAATCAACTTTCTCTTCCCCTTCTTCTTCTTCCTCCGATTTTTTCTTCTCCGCCGATTCCTCTCGCCGCCACCGTCGCCACCACCACCGTCGTAACGCCTCCGAGTTCGTCACTGGGTCGATGGCGGTTGATTTGTTAGCGGACAAGCTGAAGAAGAGCGGTTCCATTAGGATCTCAGCCGATGGGAGCACCGGCGCTGGCGTTAAAGGAAAGAAGAAACTTGGGTTTTGGTCAAGAGGAAGAAGAAGAGTTTGTTCTTGTAATGAATTAAAGAAAAAGAAAAAGAAAAAGAAAAAGATGAATCCCAATGGAGAGGGTTTGGTTAGTTGA

Protein sequence

MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFSSPSSSSSDFFFSADSSRRHRRHHHRRNASEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFWSRGRRRVCSCNELKKKKKKKKKMNPNGEGLVS
Homology
[Close]
BLAST of MELO3C017596.2 vs. NCBI nr
Match: XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 3.0e-42
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120

Query: 121 SR 123
           SR
Sbjct: 121 SR 122

[Close]
BLAST of MELO3C017596.2 vs. NCBI nr
Match: XP_011653117.1 (PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hypothetical protein Csa_4G026920 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 4.0e-39
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQSPNYSDSQSTF XXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTF-XXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKK+GSIRIS DG TGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120

Query: 121 SR 123
           SR
Sbjct: 121 SR 121

[Close]
BLAST of MELO3C017596.2 vs. NCBI nr
Match: XP_022929275.1 (uncharacterized protein LOC111435907 [Cucurbita moschata])

HSP 1 Score: 114.4 bits (285), Expect = 3.4e-22
Identity = 67/123 (54.47%), Postives = 74/123 (60.16%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFXXXXXXXXXXXX 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS  +Y+DS+ST             
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSRST---SSSSFLKSSE 60

Query: 61  XXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120
                            SE  TGSMA DL  DK+KKS SIRISADG       GKKK+GF
Sbjct: 61  SFFSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADGG-----GGKKKVGF 115

Query: 121 WSR 123
           WSR
Sbjct: 121 WSR 115

[Close]
BLAST of MELO3C017596.2 vs. NCBI nr
Match: XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])

HSP 1 Score: 102.4 bits (254), Expect = 1.3e-18
Identity = 61/124 (49.19%), Postives = 66/124 (53.23%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP--NYSDSQSTFXXXXXXXXXXX 60
           MGKSESAKECKRH N+N LPGICPSCLRE+LQQ  QS   NYSDS+ST            
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSRST---SSSSFLKSS 115

Query: 61  XXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLG 120
                             SE VTGSMA DL  DK+KKS SIR                +G
Sbjct: 116 ESFFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRXXXXXXXXXXXXXXXXVG 175

Query: 121 FWSR 123
           FWSR
Sbjct: 176 FWSR 176

[Close]
BLAST of MELO3C017596.2 vs. NCBI nr
Match: XP_023553119.1 (uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.1 bits (235), Expect = 2.1e-16
Identity = 59/123 (47.97%), Postives = 66/123 (53.66%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSP-NYSDSQSTFXXXXXXXXXXXX 60
           MGKSESA+ECKRH N+N LPGICPSCLRE+LQQ  QS  +YSDS+ST             
Sbjct: 1   MGKSESARECKRHQNHNQLPGICPSCLRERLQQLQQSSISYSDSRST---SSSSFLKSSE 60

Query: 61  XXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGF 120
                            SE VTGSMA DL  DK+KKS SIR                +GF
Sbjct: 61  SFFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIR-XXXXXXXXXXXXXXXVGF 119

Query: 121 WSR 123
           WSR
Sbjct: 121 WSR 119

[Close]
BLAST of MELO3C017596.2 vs. TrEMBL
Match: tr|A0A1S3BWL8|A0A1S3BWL8_CUCME (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120

Query: 121 SR 123
           SR
Sbjct: 121 SR 122

[Close]
BLAST of MELO3C017596.2 vs. TrEMBL
Match: tr|A0A0A0KZB2|A0A0A0KZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCLREKLQQFHQSPNYSDSQSTF XXXXXXXXXXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQSTF-XXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVKGKKKLGFW 120
           XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKK+GSIRIS DG TGAGVKGKKKLGFW
Sbjct: 61  XXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVKGKKKLGFW 120

Query: 121 SR 123
           SR
Sbjct: 121 SR 121

[Close]
BLAST of MELO3C017596.2 vs. TrEMBL
Match: tr|A0A2I4GV67|A0A2I4GV67_9ROSI (uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.3e-05
Identity = 44/127 (34.65%), Postives = 56/127 (44.09%), Query Frame = 0 

Query: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQSTFXXXXXXXXXXXXX 60
           MGKSES + CK+H N   LPG+C SCLREKL Q + S +   +   F             
Sbjct: 1   MGKSESQQGCKQHQNEKQLPGVCSSCLREKLSQLNASASNMKTTGGFGYFGSSSPNSSSA 60

Query: 61  XXXXXXXXXXXXXXXXSEFVTG-SMAVDLLADK---LKKSGSIR-ISADGSTGAGVKGKK 120
                           +   TG S+++ L       LKKS SI  +S      A   GKK
Sbjct: 61  SSSIFVSPIYGRHHRRALEKTGSSISLTLKVGHDYGLKKSRSIAFVSRSLHEEAAGSGKK 120

Query: 121 KLGFWSR 123
           K GFWS+
Sbjct: 121 KGGFWSK 127

[Close]
BLAST of MELO3C017596.2 vs. TrEMBL
Match: tr|A0A2C9UQM9|A0A2C9UQM9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G096700 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.2e-04
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0 

Query: 1  MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFH 36
          MG SE+ K CK HP++N   G+CPSCLRE+L Q H
Sbjct: 1  MGFSEAEKSCKDHPSHNKKQGVCPSCLRERLSQLH 35

[Close]
BLAST of MELO3C017596.2 vs. TrEMBL
Match: tr|A0A2N9F5I8|A0A2N9F5I8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10043 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.1e-04
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0 

Query: 1  MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPN 40
          MG SES + C++HPN   LPG+C SCLRE+L Q   S N
Sbjct: 1  MGWSESKQGCRKHPNEKQLPGVCSSCLRERLSQLQPSSN 39

The following BLAST results are available for this feature:
BLAST of MELO3C017596.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008453802.13.0e-42100.00PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo][more]
XP_011653117.14.0e-3995.90PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hy... [more]
XP_022929275.13.4e-2254.47uncharacterized protein LOC111435907 [Cucurbita moschata][more]
XP_022985135.11.3e-1849.19uncharacterized protein LOC111483218, partial [Cucurbita maxima][more]
XP_023553119.12.1e-1647.97uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo][more]
BLAST of MELO3C017596.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C017596.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C017596.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BWL8|A0A1S3BWL8_CUCME2.0e-42100.00uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=... [more]
tr|A0A0A0KZB2|A0A0A0KZB2_CUCSA2.7e-3995.90Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1[more]
tr|A0A2I4GV67|A0A2I4GV67_9ROSI7.3e-0534.65uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 P... [more]
tr|A0A2C9UQM9|A0A2C9UQM9_MANES6.2e-0460.00Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G096700 PE=4 SV=... [more]
tr|A0A2N9F5I8|A0A2N9F5I8_FAGSY8.1e-0456.41Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10043 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008004UPF0503
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017596.2.1MELO3C017596.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008004Uncharacterised protein family UPF0503PFAMPF05340DUF740coord: 6..76
e-value: 5.0E-7
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..152
NoneNo IPR availablePANTHERPTHR34046:SF1SUBFAMILY NOT NAMEDcoord: 1..122
NoneNo IPR availablePANTHERPTHR34046FAMILY NOT NAMEDcoord: 1..122

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017596.2Csa4G026920Cucumber (Chinese Long) v2cumedB297
MELO3C017596.2CSPI04G04570Wild cucumber (PI 183967)cpimedB301
MELO3C017596.2Cucsa.093660Cucumber (Gy14) v1cgymedB109
MELO3C017596.2CmoCh16G007510Cucurbita moschata (Rifu)cmomedB336
MELO3C017596.2Lsi07G001630Bottle gourd (USVL1VR-Ls)lsimedB471
MELO3C017596.2Cp4.1LG14g01110Cucurbita pepo (Zucchini)cpemedB238
MELO3C017596.2Cp4.1LG01g09310Cucurbita pepo (Zucchini)cpemedB504
MELO3C017596.2CsGy4G004480Cucumber (Gy14) v2cgybmedB266
MELO3C017596.2Cla010663Watermelon (97103) v1medwmB493
MELO3C017596.2ClCG07G017490Watermelon (Charleston Gray)medwcgB488
MELO3C017596.2Cla97C07G144550Watermelon (97103) v2medwmbB491
MELO3C017596.2Bhi01G001948Wax gourdmedwgoB573
MELO3C017596.2Carg05803Silver-seed gourdcarmedB1004
MELO3C017596.2CsaV3_UNG148160Cucumber (Chinese Long) v3cucmedB338
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017596.2Cucurbita moschata (Rifu)cmomedB779
MELO3C017596.2Cucurbita maxima (Rimu)cmamedB350
MELO3C017596.2Cucurbita maxima (Rimu)cmamedB782
MELO3C017596.2Cucurbita pepo (Zucchini)cpemedB079
MELO3C017596.2Cucurbita pepo (Zucchini)cpemedB487
MELO3C017596.2Cucurbita pepo (Zucchini)cpemedB530
MELO3C017596.2Watermelon (97103) v1medwmB519
MELO3C017596.2Silver-seed gourdcarmedB0930
MELO3C017596.2Cucumber (Chinese Long) v3cucmedB307
MELO3C017596.2Cucumber (Chinese Long) v3cucmedB339
MELO3C017596.2Cucumber (Chinese Long) v3cucmedB340
MELO3C017596.2Watermelon (97103) v2medwmbB451