Cp4.1LG01g09310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAATCGGAATCGGCGAAAGATTGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAACCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCACGGCGGACACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATAAGGTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTCCCAACCCAAAGTTTGTTGTAGGGAAATTATGGGTTAG ATGGGGAAATCGGAATCGGCGAAAGATTGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAACCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCACGGCGGACACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATAAGGTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTCCCAACCCAAAGTTTGTTGTAGGGAAATTATGGGTTAG ATGGGGAAATCGGAATCGGCGAAAGATTGCAAGAGGCACCCAAATCACAGACTCCTGCCCGGAATTTGCCCTTCTTGTCTCCGAGAAAGTCTTCAACGCTTCAATAACCAATCTTCAATCTATTCCGATTCTGTTTCCACCTTCTCTTCTTCTTCCTCTTCCTTTCCTCACTCCTCCGAGTTTTTCTTCTCCGGCGACTCTCCACGGCGGACACGCCACCATCACAAGAGGAACGCCTCCGAGATGGTCATGAGGTCGAGGGCGGCGGATTTGTTTGGGGATAAGGTGAAGATGGGCGGCGAGGGAGGGAAAAAGAAAGGTGGGTTTTGGTCGAGATTGATGGGTGGGCGGAAGGCGTTTCATTTCCATTCCCAACCCAAAGTTTGTTGTAGGGAAATTATGGGTTAG MGKSESAKDCKRHPNHRLLPGICPSCLRESLQRFNNQSSIYSDSVSTFSSSSSSFPHSSEFFFSGDSPRRTRHHHKRNASEMVMRSRAADLFGDKVKMGGEGGKKKGGFWSRLMGGRKAFHFHSQPKVCCREIMG
BLAST of Cp4.1LG01g09310 vs. TrEMBL
Match: A0A0A0KZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026920 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 8.3e-31 Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. TrEMBL
Match: A0A0D2QD40_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G041400 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-06 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. TrEMBL
Match: F6GZH7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s1679g00010 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-06 Identity = 46/134 (34.33%), Postives = 67/134 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. TrEMBL
Match: A0A103YD06_CYNCS (Uncharacterized protein family UPF0503 OS=Cynara cardunculus var. scolymus GN=Ccrd_014808 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-06 Identity = 46/134 (34.33%), Postives = 64/134 (47.76%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. TrEMBL
Match: A0A067K3Z2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18663 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.2e-06 Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. NCBI nr
Match: gi|778690424|ref|XP_011653117.1| (PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 1.2e-30 Identity = 86/135 (63.70%), Postives = 94/135 (69.63%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. NCBI nr
Match: gi|659107682|ref|XP_008453802.1| (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo]) HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29 Identity = 84/136 (61.76%), Postives = 93/136 (68.38%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. NCBI nr
Match: gi|720054231|ref|XP_010272981.1| (PREDICTED: uncharacterized protein LOC104608638 [Nelumbo nucifera]) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-07 Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. NCBI nr
Match: gi|1009146188|ref|XP_015890746.1| (PREDICTED: uncharacterized protein LOC107425283 [Ziziphus jujuba]) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06 Identity = 50/135 (37.04%), Postives = 66/135 (48.89%), Query Frame = 1
BLAST of Cp4.1LG01g09310 vs. NCBI nr
Match: gi|823144914|ref|XP_012472295.1| (PREDICTED: uncharacterized protein LOC105789468 [Gossypium raimondii]) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |