Cla97C07G144550 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C07G144550
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Avr9/Cf-9 rapidly elicited protein, putative
Location	Cla97Chr07 : 31891973 .. 31892398 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCCTTGA

mRNA sequence

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCCTTGA

Coding sequence (CDS)

ATGGGGAAATCGGAATCGGCGAAAGAATGCAAGAGGCACCCAAATCACAATCTCTTACCCGGAATTTGCCCTTCCTGTCTTACAGAAAAGCTTCAACAATTCCATCAATCTTCTATTTATTCCGATTCTCATTCGACCACCTTCTCTTCTTCTTCTTCCTCTTCCCTTCCTCACTCCTCTGAATTTTTCTTCTCCGCCGATTCCTCACACCGCCACCGCCGCCACCACCACCACCACCACCGTAGGAACGCCTCCGAGTTGGTCACTGGGTCGATGACCGCAGATTTGTTTGGGGACAAGCTGAAGAAGAGCGGCTCCATTAGGATCTCGGCCGATGGCGGCGCCGGGGCCAAAGGAGGAGGAAAGAAGAAACTTGGGTTTTGGTCCAGGTTGTTACTCCGCCCCAAGGCTTTCTATTTTCCTTGA

Protein sequence

MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHSTTFSSSSSSSLPHSSEFFFSADSSHRHRRHHHHHHRRNASELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGGGKKKLGFWSRLLLRPKAFYFP

Homology

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BLAST of Cla97C07G144550 vs. NCBI nr
Match: XP_011653117.1 (PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hypothetical protein Csa_4G026920 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 8.0e-34
Identity = 112/140 (80.00%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNHNLLPGICPSCL EKLQQFHQS  YSDS             XXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQ---------STFXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
           XXXXXXXXXXXXXXXXXXXXXXXXSE VTGSM  DL  DKLKK+GSIRIS DGG GA   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVK 120

Query: 121 GKKKLGFWSRLLLRPKAFYF 141
           GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 131

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BLAST of Cla97C07G144550 vs. NCBI nr
Match: XP_008453802.1 (PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo])

HSP 1 Score: 151.0 bits (380), Expect = 3.1e-33
Identity = 113/140 (80.71%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS  YSDS            XXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQ--------STFXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
           XXXXXXXXXXXXXXXXXXXXXXXXSE VTGSM  DL  DKLKKSGSIRISADG  GA   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVK 120

Query: 121 GKKKLGFWSRLLLRPKAFYF 141
           GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132

[Close]

BLAST of Cla97C07G144550 vs. NCBI nr
Match: XP_022929275.1 (uncharacterized protein LOC111435907 [Cucurbita moschata])

HSP 1 Score: 136.7 bits (343), Expect = 6.0e-29
Identity = 79/141 (56.03%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSI-YSDSHXXXXXXXXXXXXXXX 60
           MGKSESAKECKRH NHN LPGICPSCL E+LQQ  QSSI Y+DS                
Sbjct: 1   MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSISYADSR-----------STSS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKG 120
                                    SEL TGSM ADLFGDK+KKS SIRISADG     G
Sbjct: 61  SSFLKSSESFFSGNTSWRRRHTRNASELFTGSMAADLFGDKVKKSSSIRISADG-----G 120

Query: 121 GGKKKLGFWSRLLLRPKAFYF 141
           GGKKK+GFWSR L+RPKA YF
Sbjct: 121 GGKKKVGFWSRFLVRPKALYF 125

[Close]

BLAST of Cla97C07G144550 vs. NCBI nr
Match: XP_022985135.1 (uncharacterized protein LOC111483218, partial [Cucurbita maxima])

HSP 1 Score: 114.4 bits (285), Expect = 3.2e-22
Identity = 69/142 (48.59%), Postives = 73/142 (51.41%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSI--YSDSHXXXXXXXXXXXXXX 60
           MGKSESAKECKRH NHN LPGICPSCL E+LQQ  QSS   YSDS               
Sbjct: 56  MGKSESAKECKRHQNHNQLPGICPSCLRERLQQLQQSSSINYSDSR-----------STS 115

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAK 120
                                     SELVTGSM ADLFGDK+KKS SIR          
Sbjct: 116 SSSFLKSSESFFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIRXXXXXXXXXX 175

Query: 121 GGGKKKLGFWSRLLLRPKAFYF 141
                 +GFWSR L+RPKA YF
Sbjct: 176 XXXXXXVGFWSRFLVRPKALYF 186

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BLAST of Cla97C07G144550 vs. NCBI nr
Match: XP_023553119.1 (uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.3 bits (277), Expect = 2.7e-21
Identity = 69/141 (48.94%), Postives = 74/141 (52.48%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSI-YSDSHXXXXXXXXXXXXXXX 60
           MGKSESA+ECKRH NHN LPGICPSCL E+LQQ  QSSI YSDS                
Sbjct: 1   MGKSESARECKRHQNHNQLPGICPSCLRERLQQLQQSSISYSDSR-----------STSS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKG 120
                                    SELVTGSM ADLFGDK+KKS SIR           
Sbjct: 61  SSFLKSSESFFSGNTSWRRRHTRNASELVTGSMAADLFGDKVKKSSSIR-XXXXXXXXXX 120

Query: 121 GGKKKLGFWSRLLLRPKAFYF 141
                +GFWSR L+RPKA YF
Sbjct: 121 XXXXXVGFWSRFLVRPKALYF 129

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BLAST of Cla97C07G144550 vs. TrEMBL
Match: tr|A0A0A0KZB2|A0A0A0KZB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34
Identity = 112/140 (80.00%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MGKSESAKECKRHPNHNLLPGICPSCL EKLQQFHQS  YSDS             XXXX
Sbjct: 1   MGKSESAKECKRHPNHNLLPGICPSCLREKLQQFHQSPNYSDSQ---------STFXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
           XXXXXXXXXXXXXXXXXXXXXXXXSE VTGSM  DL  DKLKK+GSIRIS DGG GA   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKTGSIRISTDGGTGAGVK 120

Query: 121 GKKKLGFWSRLLLRPKAFYF 141
           GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 131

[Close]

BLAST of Cla97C07G144550 vs. TrEMBL
Match: tr|A0A1S3BWL8|A0A1S3BWL8_CUCME (uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33
Identity = 113/140 (80.71%), Postives = 114/140 (81.43%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MGKSESAKECKRHPN+NLLPGICPSCL EKLQQFHQS  YSDS            XXXXX
Sbjct: 1   MGKSESAKECKRHPNYNLLPGICPSCLREKLQQFHQSPNYSDSQ--------STFXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGDKLKKSGSIRISADGGAGAKGG 120
           XXXXXXXXXXXXXXXXXXXXXXXXSE VTGSM  DL  DKLKKSGSIRISADG  GA   
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXSEFVTGSMAVDLLADKLKKSGSIRISADGSTGAGVK 120

Query: 121 GKKKLGFWSRLLLRPKAFYF 141
           GKKKLGFWSRLLLRPKA YF
Sbjct: 121 GKKKLGFWSRLLLRPKALYF 132

[Close]

BLAST of Cla97C07G144550 vs. TrEMBL
Match: tr|A0A067K3Z2|A0A067K3Z2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18663 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-04
Identity = 76/133 (57.14%), Postives = 91/133 (68.42%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MG SE  + CK HP HN   G+CPSCL EKL + + + + +D   XXXXXXXXXXXXXXX
Sbjct: 1   MGFSEFQQACKEHPYHNHKQGVCPSCLREKLSKLYVAPL-NDKEAXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTG-SMTADLFGDKLKKSGSIRISADGGAGAKG 120
           XXXXXXXXXXXXXXXXXXXXXX  S+++   S    + G+ LKKS S+    +G  G K 
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXNVSDIMHSISFRVSIAGNGLKKSRSLAFVTEGKNGKK- 120

Query: 121 GGKKKLGFWSRLL 133
             K K GFWS+LL
Sbjct: 121 --KNKKGFWSKLL 129

[Close]

BLAST of Cla97C07G144550 vs. TrEMBL
Match: tr|A0A2I4GV67|A0A2I4GV67_9ROSI (uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-04
Identity = 46/134 (34.33%), Postives = 57/134 (42.54%), Query Frame = 0


Query: 1   MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFHQSSIYSDSHXXXXXXXXXXXXXXXX 60
           MGKSES + CK+H N   LPG+C SCL EKL Q + S+  S+                  
Sbjct: 1   MGKSESQQGCKQHQNEKQLPGVCSSCLREKLSQLNASA--SNMKTTGGFGYFGSSSPNSS 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXSELVTGSMTADLFGD-KLKKSGSIR-ISADGGAGAK 120
                                   S +   S+T  +  D  LKKS SI  +S      A 
Sbjct: 61  SASSSIFVSPIYGRHHRRALEKTGSSI---SLTLKVGHDYGLKKSRSIAFVSRSLHEEAA 120

Query: 121 GGGKKKLGFWSRLL 133
           G GKKK GFWS+LL
Sbjct: 121 GSGKKKGGFWSKLL 129

[Close]

BLAST of Cla97C07G144550 vs. TrEMBL
Match: tr|A0A2C9UQM9|A0A2C9UQM9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G096700 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.5e-04
Identity = 21/35 (60.00%), Postives = 25/35 (71.43%), Query Frame = 0


Query: 1  MGKSESAKECKRHPNHNLLPGICPSCLTEKLQQFH 36
          MG SE+ K CK HP+HN   G+CPSCL E+L Q H
Sbjct: 1  MGFSEAEKSCKDHPSHNKKQGVCPSCLRERLSQLH 35

The following BLAST results are available for this feature:

BLAST of Cla97C07G144550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653117.1	8.0e-34	80.00	PREDICTED: uncharacterized protein LOC105435176 [Cucumis sativus] >KGN53216.1 hy...	[more]
XP_008453802.1	3.1e-33	80.71	PREDICTED: uncharacterized protein LOC103494420 [Cucumis melo]	[more]
XP_022929275.1	6.0e-29	56.03	uncharacterized protein LOC111435907 [Cucurbita moschata]	[more]
XP_022985135.1	3.2e-22	48.59	uncharacterized protein LOC111483218, partial [Cucurbita maxima]	[more]
XP_023553119.1	2.7e-21	48.94	uncharacterized protein LOC111810620 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C07G144550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZB2\|A0A0A0KZB2_CUCSA	5.3e-34	80.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G026920 PE=4 SV=1	[more]
tr\|A0A1S3BWL8\|A0A1S3BWL8_CUCME	2.0e-33	80.71	uncharacterized protein LOC103494420 OS=Cucumis melo OX=3656 GN=LOC103494420 PE=...	[more]
tr\|A0A067K3Z2\|A0A067K3Z2_JATCU	2.6e-04	57.14	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18663 PE=4 SV=1	[more]
tr\|A0A2I4GV67\|A0A2I4GV67_9ROSI	3.4e-04	34.33	uncharacterized protein LOC109011153 OS=Juglans regia OX=51240 GN=LOC109011153 P...	[more]
tr\|A0A2C9UQM9\|A0A2C9UQM9_MANES	7.5e-04	60.00	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G096700 PE=4 SV=...	[more]

BLAST of Cla97C07G144550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C07G144550 vs. TAIR10


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008004	UPF0503

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C07G144550.1	Cla97C07G144550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008004	Uncharacterised protein family UPF0503	PFAM	PF05340	DUF740	coord: 6..56 e-value: 2.0E-5 score: 23.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..87
None	No IPR available	PANTHER	PTHR34046	FAMILY NOT NAMED	coord: 1..132
None	No IPR available	PANTHER	PTHR34046:SF1	SUBFAMILY NOT NAMED	coord: 1..132

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C07G144550	Cla010663	Watermelon (97103) v1	wmwmbB174
Cla97C07G144550	Csa4G026920	Cucumber (Chinese Long) v2	cuwmbB316
Cla97C07G144550	MELO3C017596	Melon (DHL92) v3.5.1	mewmbB498
Cla97C07G144550	ClCG07G017490	Watermelon (Charleston Gray)	wcgwmbB307
Cla97C07G144550	CSPI04G04570	Wild cucumber (PI 183967)	cpiwmbB326
Cla97C07G144550	Cucsa.093660	Cucumber (Gy14) v1	cgywmbB112
Cla97C07G144550	CmoCh16G007510	Cucurbita moschata (Rifu)	cmowmbB339
Cla97C07G144550	Lsi07G001630	Bottle gourd (USVL1VR-Ls)	lsiwmbB406
Cla97C07G144550	CsGy4G004480	Cucumber (Gy14) v2	cgybwmbB298
Cla97C07G144550	MELO3C017596.2	Melon (DHL92) v3.6.1	medwmbB491
Cla97C07G144550	Carg05803	Silver-seed gourd	carwmbB1085
Cla97C07G144550	CsaV3_UNG148160	Cucumber (Chinese Long) v3	cucwmbB345
Cla97C07G144550	Bhi01G001948	Wax gourd	wgowmbB222

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C07G144550	Silver-seed gourd	carwmbB0990
Cla97C07G144550	Cucurbita moschata (Rifu)	cmowmbB759
Cla97C07G144550	Cucumber (Chinese Long) v3	cucwmbB324
Cla97C07G144550	Cucumber (Chinese Long) v3	cucwmbB349
Cla97C07G144550	Cucumber (Chinese Long) v3	cucwmbB346