CsaV3_7G008810 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGTGAGTCATGAGATTTAATAAGAAGAGTAAAGTTGTTTCCTTTTTTTCTTTGTTCTTCTTTTTTGTGGTTCAATTTTTATTCTTTTACAAATCCTATCTGGTGGATGAATGAATGAATCTTTGCCTCTTTTATATATATATATATATATATATATATATTTCTCTCTCTCTTTATTTGCAATTTAAACACTAATTTCCTTCATTTTTATCCTTTACTTTGAAATATTTTTTGTAATAAACAAATTTTGTTTATCTTAGTCCTCATACACTAAAATAGTGAATTTTAATAAAAGAACTCAAATGGGCAATGTTTTTAGAAAAACAATATTTTGTGAAAGTAAAGGAAATAAAAATGAATAGTTTCAATTAAAAAATTGGAATTGAATCAAAATAATAATGAAAAAAAGAATCATACTTTCACCATAATAGTGAAAATAAGAGTGAAAGTAGCATAGTTTTTAGACATAAGAAAAGGAGACAAAGTATTTACAAATATTAGCAAAATTTGAAATATATTACTTCTTTTTTAAGTGGTTGATAGCTATATGATATATCCATATTCTAAAATTTTGCTATCTATTTAAAGAAAGTTTCGATGTTATATATCAATTGGGGGGATGGCATTGACTGTTAAGGCAAGAGACTCTTTTGTTATGTTTACATTCCCTTTTCTTTCTTTCTTTTTCTTTTTCAATACTAGGCAGGGGCTTGGTGCTAG ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCTTGGTGCTAG ATGTCCACTCCCATCGACCAACTCCAGCCCCCCCCGCCCCTTCACTCCTCCCACGCCTCTGTCGGCCCCCTCATCGCCGTCCTCGCCGTCATTTCCATCCTTGGCGTCATTGCTGGTATGATTGGCCGCCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCACACTACGACCTCGAGGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCCCCTCCTCCTCCGCCTCATCTCCGCCACCCACCGCCTCTGGATTCTGTTCCTGTGGCTGAACCTCTTGGTGGGCCTCCGCCGGAGATCAAACAAAGCGCCCATGCCGATGCTGATGCTAAAGGGGAGAATTTGCAGTCGGCGGCTCCTGGAACCGGCGGGGCTTGGTGCTAG MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAKGENLQSAAPGTGGAWC
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: KGN43952.1 (hypothetical protein Csa_7G074850 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 9.6e-53 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_008455516.1 (PREDICTED: type IV secretion system protein virB10-like [Cucumis melo]) HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46 Identity = 125/134 (93.28%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_022972364.1 (uncharacterized protein LOC111470940 [Cucurbita maxima]) HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30 Identity = 88/130 (67.69%), Postives = 91/130 (70.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_022989510.1 (uncharacterized protein LOC111486567 [Cucurbita maxima]) HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30 Identity = 84/133 (63.16%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. NCBI nr
Match: XP_022927713.1 (uncharacterized protein LOC111434531 [Cucurbita moschata]) HSP 1 Score: 139.8 bits (351), Expect = 6.7e-30 Identity = 83/133 (62.41%), Postives = 97/133 (72.93%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TAIR10
Match: AT2G26520.1 (unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 5.5e-10 Identity = 30/77 (38.96%), Postives = 41/77 (53.25%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TAIR10
Match: AT3G57500.1 (unknown protein) HSP 1 Score: 52.4 bits (124), Expect = 2.6e-07 Identity = 24/67 (35.82%), Postives = 35/67 (52.24%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TrEMBL
Match: tr|A0A0A0K6N4|A0A0A0K6N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074850 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 6.4e-53 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TrEMBL
Match: tr|A0A1S3C1T9|A0A1S3C1T9_CUCME (type IV secretion system protein virB10-like OS=Cucumis melo OX=3656 GN=LOC103495668 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.5e-46 Identity = 125/134 (93.28%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TrEMBL
Match: tr|A0A2P6PMT8|A0A2P6PMT8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0259071 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.5e-14 Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TrEMBL
Match: tr|A0A061FJB6|A0A061FJB6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_033911 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.3e-12 Identity = 50/85 (58.82%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of CsaV3_7G008810 vs. TrEMBL
Match: tr|A0A2G5EK70|A0A2G5EK70_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00700481v1 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11 Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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