CmoCh19G006400 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCTACGGCTCCGTCGGTCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGAATGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTCGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGTGAGTCGTGA ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCTACGGCTCCGTCGGTCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGAATGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTCGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGTGAGTCGTGA ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCTACGGCTCCGTCGGTCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGAATGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTCGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGTGAGTCGTGA
BLAST of CmoCh19G006400 vs. TrEMBL
Match: A0A0A0K6N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 8.7e-54 Identity = 112/133 (84.21%), Postives = 119/133 (89.47%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TrEMBL
Match: A0A067KPY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 9.0e-27 Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TrEMBL
Match: A0A061E7I4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.9e-25 Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TrEMBL
Match: A5BS04_VITVI (Peroxidase OS=Vitis vinifera GN=VITISV_035943 PE=3 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.5e-25 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TrEMBL
Match: A0A0D2VAC4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G040900 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.7e-23 Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TAIR10
Match: AT2G26520.1 (AT2G26520.1 unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 6.0e-14 Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 1
BLAST of CmoCh19G006400 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 1
BLAST of CmoCh19G006400 vs. NCBI nr
Match: gi|659110987|ref|XP_008455516.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [Cucumis melo]) HSP 1 Score: 223.0 bits (567), Expect = 3.0e-55 Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 1
BLAST of CmoCh19G006400 vs. NCBI nr
Match: gi|700188719|gb|KGN43952.1| (hypothetical protein Csa_7G074850 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.2e-53 Identity = 112/133 (84.21%), Postives = 119/133 (89.47%), Query Frame = 1
BLAST of CmoCh19G006400 vs. NCBI nr
Match: gi|802598804|ref|XP_012072449.1| (PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas]) HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26 Identity = 71/131 (54.20%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of CmoCh19G006400 vs. NCBI nr
Match: gi|1009115432|ref|XP_015874226.1| (PREDICTED: transcription factor RBF1-like [Ziziphus jujuba]) HSP 1 Score: 125.6 bits (314), Expect = 6.4e-26 Identity = 72/128 (56.25%), Postives = 90/128 (70.31%), Query Frame = 1
BLAST of CmoCh19G006400 vs. NCBI nr
Match: gi|764548062|ref|XP_011459753.1| (PREDICTED: uncharacterized protein LOC105350079 [Fragaria vesca subsp. vesca]) HSP 1 Score: 124.0 bits (310), Expect = 1.9e-25 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |