Cp4.1LG15g05030 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG15g05030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG15 : 5977306 .. 5977701 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCCACGGCTCCGTCGGCCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGACTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGACGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTGGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGCGGTGAGTCGTGA

mRNA sequence

ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCCACGGCTCCGTCGGCCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGACTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGACGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTGGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGCGGTGAGTCGTGA

Coding sequence (CDS)

ATGTCCACTCCCGTCGACCAGCTCCAGCCCCCGCCGACCGCTCATTCCGGCCACGGCTCCGTCGGCCCAGTCATCGCCGTCCTCGCAGTCATTTCCATCCTCGGCGTCATCGCCGGCATTATCGGCCGTCTCTGCTCCGGCCGCCCCGTCTTCGGCTACGGCGCCCACTACGACGTCGAGGACTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGACGGCTCCCTCGACCCTCCTCCGCCGCCGCCGCCGCCGCCGCATCTCCGCCACCCTCCGCCGCTGGATGCCGTTCCTGTAGTCGAACCCCTTGGTGGGCCGCCGGAAATCAAGCAAGGCGCCGATGACAAACGCGAGAATTTGCAGTCGGCGGCTCCCGGAACCGGCGGCGGTGAGTCGTGA

Protein sequence

MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGADDKRENLQSAAPGTGGGES
BLAST of Cp4.1LG15g05030 vs. TrEMBL
Match: A0A0A0K6N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 1

Query: 1   MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVE 60
           MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E
Sbjct: 1   MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLE 60

Query: 61  DWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGG-PPEIKQG----ADDK 120
           DWVEKKCASCLDGSLD   PPPPPPHLRHPPPLD+VPV EPLGG PPEIKQ     AD K
Sbjct: 61  DWVEKKCASCLDGSLD---PPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAK 120

Query: 121 RENLQSAAPGTGG 129
            ENLQSAAPGTGG
Sbjct: 121 GENLQSAAPGTGG 130

BLAST of Cp4.1LG15g05030 vs. TrEMBL
Match: A0A067KPY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-26
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 1

Query: 1   MSTPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFG 60
           MSTP+DQ QPPP        TAH+GHGSVGP IAVLAVI+ILGV+AG++GRLCSGR + G
Sbjct: 1   MSTPLDQQQPPPMEVTQQVYTAHTGHGSVGPFIAVLAVITILGVLAGMVGRLCSGRRIMG 60

Query: 61  YGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPL--GGPPEIKQ 120
           +G  YD E WVE+KC+SCLDG +DPPP PP             +PV EPL   GP EIK+
Sbjct: 61  HG-QYDFEGWVERKCSSCLDGRVDPPPAPPAD-----------IPVAEPLEETGPQEIKE 120

Query: 121 GADDKRENLQSAA 124
              ++ ++   A+
Sbjct: 121 EEQEQSKHKSHAS 121

BLAST of Cp4.1LG15g05030 vs. TrEMBL
Match: A0A061E7I4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.5e-26
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 1

Query: 1  MSTPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFG 60
          MSTP++Q QPPP        TAH+GHGSVGPVIAVLAVI+ILGVIAG+IGRLCSGRP+ G
Sbjct: 11 MSTPLEQQQPPPVGVSQQAYTAHTGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRPIMG 70

Query: 61 YGAHYDVEDWVEKKCASCLDGSLDPPPPPP 83
          +G  YD E WVE+KC+SCLDG ++PPPP P
Sbjct: 71 HG-QYDFEGWVERKCSSCLDGRVNPPPPRP 99

BLAST of Cp4.1LG15g05030 vs. TrEMBL
Match: A5BS04_VITVI (Peroxidase OS=Vitis vinifera GN=VITISV_035943 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.0e-25
Identity = 74/125 (59.20%), Postives = 85/125 (68.00%), Query Frame = 1

Query: 1   MSTPVDQLQP---PP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRP 60
           MSTP+D LQ    PP        TAHSGHGSVGPVIAVLAVI+ILGVIAG+IGRLCSGR 
Sbjct: 810 MSTPIDPLQQQQSPPGGLTQQAYTAHSGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRR 869

Query: 61  VFGYGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHP----PPLDAVPVVEPLGGP 111
           + G+G  YDVE WVE+KC+SC+DG +DPPP PPP P    P    PP D+    +     
Sbjct: 870 IMGHG-QYDVEGWVERKCSSCIDGRVDPPPRPPPAPTSYSPGESAPPADSSETAQ----- 927

BLAST of Cp4.1LG15g05030 vs. TrEMBL
Match: I1JEX1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G134900 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23
Identity = 76/136 (55.88%), Postives = 88/136 (64.71%), Query Frame = 1

Query: 1   MSTPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFG 60
           MSTP  Q QPPP        T HSGHGSVGPVIAVLAVI++LGVIAG+IGRLCSGR V G
Sbjct: 1   MSTPFVQ-QPPPIEVTQQAYTTHSGHGSVGPVIAVLAVITVLGVIAGMIGRLCSGRRVMG 60

Query: 61  YGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPL----DAVPVVEPLGGPPEI 120
           +G  +DVE WVE KC+SC+DG + PPPP P PP    PPP     +  P  EP   P EI
Sbjct: 61  HG-EFDVETWVETKCSSCVDGRIAPPPPRPRPP----PPPEHNSGEESPPEEP---PQEI 120

Query: 121 KQGADDKRENLQSAAP 125
           K+    + E   S +P
Sbjct: 121 KEQQQQREEEQHSHSP 127

BLAST of Cp4.1LG15g05030 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14
Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1

Query: 9   QPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVEDWVEKKCA 68
           Q  P+ +S H S+  ++ VLAVI+IL V+AG+  RLC GR +  +G  +D+E WVE+KC 
Sbjct: 26  QDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHL-SHGGDHDIEGWVERKCR 85

Query: 69  SCLDG-----SLDPPPPPPPPP 86
           SC+D      S  P PPPPPPP
Sbjct: 86  SCIDAGIPAVSAAPSPPPPPPP 106

BLAST of Cp4.1LG15g05030 vs. TAIR10
Match: AT2G26520.1 (AT2G26520.1 unknown protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1

Query: 9  QPPPTAH----------SGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYD 68
          QPPP             +G+ ++GP IAV  V+++L V+A +IGRLCSG+ + GYG  YD
Sbjct: 9  QPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILGYG-DYD 68

Query: 69 VEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPP 93
          +E W E +C SC+DG + P  P P P     PPP
Sbjct: 69 MERWAESRCGSCIDGHIHPHRPSPSPT----PPP 97

BLAST of Cp4.1LG15g05030 vs. NCBI nr
Match: gi|659110987|ref|XP_008455516.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 2.7e-56
Identity = 117/132 (88.64%), Postives = 121/132 (91.67%), Query Frame = 1

Query: 1   MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVE 60
           MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYDVE
Sbjct: 1   MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDVE 60

Query: 61  DWVEKKCASCLDGSLD-PPPPPPPPPHLRHPPPLDAVPVVEPLGG-PPEIKQG--ADDKR 120
           DWVEKKCASCLDGSLD PPPPPPPPPHLRHPPPLD+VPV EPLGG PPEIKQG  AD K 
Sbjct: 61  DWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQGADADAKG 120

Query: 121 ENLQSAAPGTGG 129
           ENLQSAAPGTGG
Sbjct: 121 ENLQSAAPGTGG 132

BLAST of Cp4.1LG15g05030 vs. NCBI nr
Match: gi|700188719|gb|KGN43952.1| (hypothetical protein Csa_7G074850 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-53
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 1

Query: 1   MSTPVDQLQPPPTAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGYGAHYDVE 60
           MSTP+DQLQPPP  HS H SVGP+IAVLAVISILGVIAG+IGRLCSGRPVFGYGAHYD+E
Sbjct: 1   MSTPIDQLQPPPPLHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHYDLE 60

Query: 61  DWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGG-PPEIKQG----ADDK 120
           DWVEKKCASCLDGSLD   PPPPPPHLRHPPPLD+VPV EPLGG PPEIKQ     AD K
Sbjct: 61  DWVEKKCASCLDGSLD---PPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAK 120

Query: 121 RENLQSAAPGTGG 129
            ENLQSAAPGTGG
Sbjct: 121 GENLQSAAPGTGG 130

BLAST of Cp4.1LG15g05030 vs. NCBI nr
Match: gi|1009115432|ref|XP_015874226.1| (PREDICTED: transcription factor RBF1-like [Ziziphus jujuba])

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-26
Identity = 73/127 (57.48%), Postives = 89/127 (70.08%), Query Frame = 1

Query: 2   STPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFGY 61
           +TP+DQ +PPP        T HSGHGSVGPVIAVLAVI+ILGVIAG+IGRLCSGRP+ G+
Sbjct: 3   TTPIDQ-EPPPMAMTQQAYTTHSGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRPIMGH 62

Query: 62  GAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPLGGPPEIKQGAD 121
           G  YD E WVE+KC++CLDG +DPPPPPP PP          VPV  P+    EIK+  +
Sbjct: 63  G-QYDFEAWVERKCSTCLDGRVDPPPPPPRPPANTSG---GEVPVAMPVEIQQEIKEEEE 122

BLAST of Cp4.1LG15g05030 vs. NCBI nr
Match: gi|802598804|ref|XP_012072449.1| (PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas])

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-26
Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 1

Query: 1   MSTPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFG 60
           MSTP+DQ QPPP        TAH+GHGSVGP IAVLAVI+ILGV+AG++GRLCSGR + G
Sbjct: 1   MSTPLDQQQPPPMEVTQQVYTAHTGHGSVGPFIAVLAVITILGVLAGMVGRLCSGRRIMG 60

Query: 61  YGAHYDVEDWVEKKCASCLDGSLDPPPPPPPPPHLRHPPPLDAVPVVEPL--GGPPEIKQ 120
           +G  YD E WVE+KC+SCLDG +DPPP PP             +PV EPL   GP EIK+
Sbjct: 61  HG-QYDFEGWVERKCSSCLDGRVDPPPAPPAD-----------IPVAEPLEETGPQEIKE 120

Query: 121 GADDKRENLQSAA 124
              ++ ++   A+
Sbjct: 121 EEQEQSKHKSHAS 121

BLAST of Cp4.1LG15g05030 vs. NCBI nr
Match: gi|590686362|ref|XP_007042357.1| (Uncharacterized protein TCM_007002 [Theobroma cacao])

HSP 1 Score: 125.9 bits (315), Expect = 5.0e-26
Identity = 63/90 (70.00%), Postives = 74/90 (82.22%), Query Frame = 1

Query: 1  MSTPVDQLQPPP--------TAHSGHGSVGPVIAVLAVISILGVIAGIIGRLCSGRPVFG 60
          MSTP++Q QPPP        TAH+GHGSVGPVIAVLAVI+ILGVIAG+IGRLCSGRP+ G
Sbjct: 11 MSTPLEQQQPPPVGVSQQAYTAHTGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRPIMG 70

Query: 61 YGAHYDVEDWVEKKCASCLDGSLDPPPPPP 83
          +G  YD E WVE+KC+SCLDG ++PPPP P
Sbjct: 71 HG-QYDFEGWVERKCSSCLDGRVNPPPPRP 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K6N4_CUCSA2.6e-5384.21Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1[more]
A0A067KPY1_JATCU1.2e-2654.14Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1[more]
A0A061E7I4_THECC3.5e-2670.00Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1[more]
A5BS04_VITVI3.0e-2559.20Peroxidase OS=Vitis vinifera GN=VITISV_035943 PE=3 SV=1[more]
I1JEX1_SOYBN1.6e-2355.88Uncharacterized protein OS=Glycine max GN=GLYMA_02G134900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G57500.11.6e-1448.78 unknown protein[more]
AT2G26520.11.0e-1343.62 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659110987|ref|XP_008455516.1|2.7e-5688.64PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiqu... [more]
gi|700188719|gb|KGN43952.1|3.7e-5384.21hypothetical protein Csa_7G074850 [Cucumis sativus][more]
gi|1009115432|ref|XP_015874226.1|1.0e-2657.48PREDICTED: transcription factor RBF1-like [Ziziphus jujuba][more]
gi|802598804|ref|XP_012072449.1|1.7e-2654.14PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas][more]
gi|590686362|ref|XP_007042357.1|5.0e-2670.00Uncharacterized protein TCM_007002 [Theobroma cacao][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006468 protein phosphorylation
biological_process GO:0044710 single-organism metabolic process
biological_process GO:1902589 single-organism organelle organization
biological_process GO:0000723 telomere maintenance
cellular_component GO:0000922 spindle pole
cellular_component GO:0005815 microtubule organizing center
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0015630 microtubule cytoskeleton
cellular_component GO:0044430 cytoskeletal part
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0016491 oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g05030.1Cp4.1LG15g05030.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 1..110
score: 4.2
NoneNo IPR availablePANTHERPTHR33429:SF5SUBFAMILY NOT NAMEDcoord: 1..110
score: 4.2

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g05030Cp4.1LG04g08150Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG15g05030Cp4.1LG05g12310Cucurbita pepo (Zucchini)cpecpeB274