CmoCh11G013450 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G013450
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionTransmembrane protein, putative
LocationCmo_Chr11 : 9320893 .. 9321282 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA

mRNA sequence

ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA

Coding sequence (CDS)

ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA
BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A0A0K6N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-43
Identity = 95/135 (70.37%), Postives = 109/135 (80.74%), Query Frame = 1

Query: 1   MSVPLDQLQPPPSAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQY 60
           MS P+DQLQPPP    +H +  SVGP+IAVLAVISILG IAGMIGR+C GRPVFGY A Y
Sbjct: 1   MSTPIDQLQPPPP---LHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHY 60

Query: 61  DVEDWVEKKCASCLDGSLD---PPPHLRPPPPIEAIPVSEPLGG-PPNIKEG--GDGDRE 120
           D+EDWVEKKCASCLDGSLD   PPPHLR PPP++++PV+EPLGG PP IK+    D D +
Sbjct: 61  DLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAK 120

Query: 121 RENLQSVAPGSGGES 130
            ENLQS APG+GGES
Sbjct: 121 GENLQSAAPGTGGES 132

BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A061E7I4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 6.1e-23
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 1

Query: 1   MSVPLDQLQPPP-----SAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFG 60
           MS PL+Q QPPP      A   H   GSVGPVIAVLAVI+ILG IAGMIGR+C GRP+ G
Sbjct: 11  MSTPLEQQQPPPVGVSQQAYTAHTGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRPIMG 70

Query: 61  YNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEP 99
           +  QYD E WVE+KC+SCLDG ++PP    PP P E +PV+ P
Sbjct: 71  H-GQYDFEGWVERKCSSCLDGRVNPP----PPRPTEEVPVAVP 108

BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A067KPY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-22
Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1

Query: 1   MSVPLDQLQPPPSAAA-----IHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFG 60
           MS PLDQ QPPP          H   GSVGP IAVLAVI+ILG +AGM+GR+C GR + G
Sbjct: 1   MSTPLDQQQPPPMEVTQQVYTAHTGHGSVGPFIAVLAVITILGVLAGMVGRLCSGRRIMG 60

Query: 61  YNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPL--GGPPNIKEGGDGDR 120
           +  QYD E WVE+KC+SCLDG +DPP    P PP + IPV+EPL   GP  IKE    ++
Sbjct: 61  H-GQYDFEGWVERKCSSCLDGRVDPP----PAPPAD-IPVAEPLEETGPQEIKE---EEQ 120

Query: 121 ERENLQSVAPGSG 127
           E+   +S A  SG
Sbjct: 121 EQSKHKSHASSSG 124

BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A067E5K6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036640mg PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 7.5e-21
Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1

Query: 1   MSVPLDQLQPPPS------AAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVF 60
           MS+P+   QPPP+      A   H   GSVGPVIAVLAVI+ILG IAGMIGR+C GR + 
Sbjct: 1   MSMPVIGQQPPPAVEGTQQAYTAHSGHGSVGPVIAVLAVITILGVIAGMIGRLCTGRRIM 60

Query: 61  GYNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPL 100
           G + QYD E WVE+KC+SCLDGS+DP PH    P    IPV EP+
Sbjct: 61  G-SGQYDFEGWVERKCSSCLDGSIDPAPHRTARPD---IPVEEPV 101

BLAST of CmoCh11G013450 vs. TrEMBL
Match: U5GFK7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s15180g PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.7e-20
Identity = 70/133 (52.63%), Postives = 79/133 (59.40%), Query Frame = 1

Query: 1   MSVPLDQLQPP-------PS------AAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRV 60
           MS PLDQ Q         PS      AA  H   GSVGPVIAVLAVI+ILG IAGMIGR+
Sbjct: 1   MSTPLDQQQQQQQQQQETPSMEVSQQAAYTHTGHGSVGPVIAVLAVITILGVIAGMIGRL 60

Query: 61  CFGRPVFGYNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPLGGPPNIKE 120
           C GR + G+  QYD E WVE+KC+SCLDG +DPPP      P+ A  V E   GP  IKE
Sbjct: 61  CSGRRILGHG-QYDFEGWVERKCSSCLDGHVDPPPTRHADIPVAAPVVEE---GPQEIKE 120

BLAST of CmoCh11G013450 vs. TAIR10
Match: AT2G26520.1 (AT2G26520.1 unknown protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 1

Query: 2   SVPLDQLQPPP-------SAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVF 61
           S+PL   QPPP       S++       ++GP IAV  V+++L  +A +IGR+C G+ + 
Sbjct: 3   SMPL-YWQPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTIL 62

Query: 62  GYNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPLGGPPNIKEGGDGDRE 117
           GY   YD+E W E +C SC+DG + P      P P    P+     G     EG   D +
Sbjct: 63  GYG-DYDMERWAESRCGSCIDGHIHPHRPSPSPTPPPRQPLHHTSSGVSAESEGHVADLD 122

BLAST of CmoCh11G013450 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 9.0e-10
Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1

Query: 6   DQLQPPPSAAAIHPAQG----------SVGPVIAVLAVISILGFIAGMIGRVCFGRPVFG 65
           DQL   P+   I P             S+  ++ VLAVI+IL  +AG+  R+C GR +  
Sbjct: 10  DQLSTTPTTIYIDPPSQDQPSHNSDHRSIETLVVVLAVITILSVLAGVFARLCGGRHL-S 69

Query: 66  YNAQYDVEDWVEKKCASCLDGSL-------DPPPHLRPPPPIEAIPVSEP 99
           +   +D+E WVE+KC SC+D  +        PPP   PPPP  A   S+P
Sbjct: 70  HGGDHDIEGWVERKCRSCIDAGIPAVSAAPSPPP---PPPPATAEERSKP 115

BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|659110987|ref|XP_008455516.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 8.1e-45
Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 1

Query: 1   MSVPLDQLQPPPSAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQY 60
           MS P+DQLQPPP    +H +  SVGP+IAVLAVISILG IAGMIGR+C GRPVFGY A Y
Sbjct: 1   MSTPIDQLQPPPP---LHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHY 60

Query: 61  DVEDWVEKKCASCLDGSLD-------PPPHLRPPPPIEAIPVSEPLGG-PPNIKEGGDGD 120
           DVEDWVEKKCASCLDGSLD       PPPHLR PPP++++PV+EPLGG PP IK+G D D
Sbjct: 61  DVEDWVEKKCASCLDGSLDPPPPPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQGADAD 120

Query: 121 RERENLQSVAPGSGGES 130
            + ENLQS APG+GGES
Sbjct: 121 AKGENLQSAAPGTGGES 134

BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|700188719|gb|KGN43952.1| (hypothetical protein Csa_7G074850 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 9.9e-43
Identity = 95/135 (70.37%), Postives = 109/135 (80.74%), Query Frame = 1

Query: 1   MSVPLDQLQPPPSAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFGYNAQY 60
           MS P+DQLQPPP    +H +  SVGP+IAVLAVISILG IAGMIGR+C GRPVFGY A Y
Sbjct: 1   MSTPIDQLQPPPP---LHSSHASVGPLIAVLAVISILGVIAGMIGRLCSGRPVFGYGAHY 60

Query: 61  DVEDWVEKKCASCLDGSLD---PPPHLRPPPPIEAIPVSEPLGG-PPNIKEG--GDGDRE 120
           D+EDWVEKKCASCLDGSLD   PPPHLR PPP++++PV+EPLGG PP IK+    D D +
Sbjct: 61  DLEDWVEKKCASCLDGSLDPPPPPPHLRHPPPLDSVPVAEPLGGPPPEIKQSAHADADAK 120

Query: 121 RENLQSVAPGSGGES 130
            ENLQS APG+GGES
Sbjct: 121 GENLQSAAPGTGGES 132

BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|590686362|ref|XP_007042357.1| (Uncharacterized protein TCM_007002 [Theobroma cacao])

HSP 1 Score: 115.2 bits (287), Expect = 8.7e-23
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 1

Query: 1   MSVPLDQLQPPP-----SAAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFG 60
           MS PL+Q QPPP      A   H   GSVGPVIAVLAVI+ILG IAGMIGR+C GRP+ G
Sbjct: 11  MSTPLEQQQPPPVGVSQQAYTAHTGHGSVGPVIAVLAVITILGVIAGMIGRLCSGRPIMG 70

Query: 61  YNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEP 99
           +  QYD E WVE+KC+SCLDG ++PP    PP P E +PV+ P
Sbjct: 71  H-GQYDFEGWVERKCSSCLDGRVNPP----PPRPTEEVPVAVP 108

BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|802598804|ref|XP_012072449.1| (PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas])

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1

Query: 1   MSVPLDQLQPPPSAAA-----IHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVFG 60
           MS PLDQ QPPP          H   GSVGP IAVLAVI+ILG +AGM+GR+C GR + G
Sbjct: 1   MSTPLDQQQPPPMEVTQQVYTAHTGHGSVGPFIAVLAVITILGVLAGMVGRLCSGRRIMG 60

Query: 61  YNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPL--GGPPNIKEGGDGDR 120
           +  QYD E WVE+KC+SCLDG +DPP    P PP + IPV+EPL   GP  IKE    ++
Sbjct: 61  H-GQYDFEGWVERKCSSCLDGRVDPP----PAPPAD-IPVAEPLEETGPQEIKE---EEQ 120

Query: 121 ERENLQSVAPGSG 127
           E+   +S A  SG
Sbjct: 121 EQSKHKSHASSSG 124

BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|641830045|gb|KDO49145.1| (hypothetical protein CISIN_1g036640mg [Citrus sinensis])

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1

Query: 1   MSVPLDQLQPPPS------AAAIHPAQGSVGPVIAVLAVISILGFIAGMIGRVCFGRPVF 60
           MS+P+   QPPP+      A   H   GSVGPVIAVLAVI+ILG IAGMIGR+C GR + 
Sbjct: 1   MSMPVIGQQPPPAVEGTQQAYTAHSGHGSVGPVIAVLAVITILGVIAGMIGRLCTGRRIM 60

Query: 61  GYNAQYDVEDWVEKKCASCLDGSLDPPPHLRPPPPIEAIPVSEPL 100
           G + QYD E WVE+KC+SCLDGS+DP PH    P    IPV EP+
Sbjct: 61  G-SGQYDFEGWVERKCSSCLDGSIDPAPHRTARPD---IPVEEPV 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K6N4_CUCSA6.9e-4370.37Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1[more]
A0A061E7I4_THECC6.1e-2360.19Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1[more]
A0A067KPY1_JATCU1.0e-2253.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1[more]
A0A067E5K6_CITSI7.5e-2158.10Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036640mg PE=4 SV=1[more]
U5GFK7_POPTR3.7e-2052.63Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s15180g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G26520.12.1e-1134.43 unknown protein[more]
AT3G57500.19.0e-1036.36 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659110987|ref|XP_008455516.1|8.1e-4570.80PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiqu... [more]
gi|700188719|gb|KGN43952.1|9.9e-4370.37hypothetical protein Csa_7G074850 [Cucumis sativus][more]
gi|590686362|ref|XP_007042357.1|8.7e-2360.19Uncharacterized protein TCM_007002 [Theobroma cacao][more]
gi|802598804|ref|XP_012072449.1|1.5e-2253.38PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas][more]
gi|641830045|gb|KDO49145.1|1.1e-2058.10hypothetical protein CISIN_1g036640mg [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0000723 telomere maintenance
biological_process GO:0008150 biological_process
biological_process GO:0006468 protein phosphorylation
biological_process GO:0044710 single-organism metabolic process
biological_process GO:1902589 single-organism organelle organization
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0015630 microtubule cytoskeleton
cellular_component GO:0000922 spindle pole
cellular_component GO:0044430 cytoskeletal part
cellular_component GO:0005815 microtubule organizing center
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G013450.1CmoCh11G013450.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 1..117
score: 3.0
NoneNo IPR availablePANTHERPTHR33429:SF5SUBFAMILY NOT NAMEDcoord: 1..117
score: 3.0

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G013450CmoCh19G006400Cucurbita moschata (Rifu)cmocmoB110