CmoCh11G013450 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA ATGTCCGTTCCCCTCGACCAGCTCCAACCCCCGCCCTCTGCCGCCGCCATACACCCCGCCCAGGGCTCCGTCGGCCCCGTCATCGCCGTCCTTGCAGTGATTTCCATCCTCGGCTTCATTGCCGGCATGATCGGCCGCGTCTGCTTTGGCCGTCCCGTTTTTGGCTACAACGCCCAGTACGACGTCGAAGATTGGGTCGAGAAGAAATGTGCTTCCTGCCTCGATGGGTCTCTAGACCCTCCCCCGCATCTCCGCCCCCCGCCACCGATCGAAGCTATTCCGGTGTCGGAGCCGCTTGGTGGGCCGCCGAACATCAAAGAAGGTGGCGATGGCGATAGGGAACGCGAGAATCTGCAGTCGGTGGCTCCCGGCAGTGGCGGTGAGTCGTGA
BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A0A0K6N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G074850 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 6.9e-43 Identity = 95/135 (70.37%), Postives = 109/135 (80.74%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A061E7I4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007002 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 6.1e-23 Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A067KPY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04879 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.0e-22 Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TrEMBL
Match: A0A067E5K6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036640mg PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 7.5e-21 Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TrEMBL
Match: U5GFK7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s15180g PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 3.7e-20 Identity = 70/133 (52.63%), Postives = 79/133 (59.40%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TAIR10
Match: AT2G26520.1 (AT2G26520.1 unknown protein) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 1
BLAST of CmoCh11G013450 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein) HSP 1 Score: 60.5 bits (145), Expect = 9.0e-10 Identity = 40/110 (36.36%), Postives = 56/110 (50.91%), Query Frame = 1
BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|659110987|ref|XP_008455516.1| (PREDICTED: putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 [Cucumis melo]) HSP 1 Score: 188.3 bits (477), Expect = 8.1e-45 Identity = 97/137 (70.80%), Postives = 110/137 (80.29%), Query Frame = 1
BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|700188719|gb|KGN43952.1| (hypothetical protein Csa_7G074850 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 9.9e-43 Identity = 95/135 (70.37%), Postives = 109/135 (80.74%), Query Frame = 1
BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|590686362|ref|XP_007042357.1| (Uncharacterized protein TCM_007002 [Theobroma cacao]) HSP 1 Score: 115.2 bits (287), Expect = 8.7e-23 Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 1
BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|802598804|ref|XP_012072449.1| (PREDICTED: uncharacterized protein LOC105634230 [Jatropha curcas]) HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22 Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1
BLAST of CmoCh11G013450 vs. NCBI nr
Match: gi|641830045|gb|KDO49145.1| (hypothetical protein CISIN_1g036640mg [Citrus sinensis]) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |