CsaV3_2G028190 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAAAACCTTTTGATCTCTTCTGATATCCAAACTTCATTTATTCGGACTCCATAACTGTGTTTAATCATATAGATCGGAAGTTTTAAGATGCATAACAAAGCAAAAGGAAAAAAAAACCAAAAAGGCAAAGAAATGAGAGATTAGAAATCAGAGGCTTCACGTGACAGTACTGGCATTTCAGCCAATGTTACGTAGCCAGTTTCTGTAGGGCTGGAACAGATTCTATAAAATTATGCTTTGTTTGCACTTATTATTTGTTTTTTATCCATTTTTATAGTTAAAAAACAGTAACTTTTGAAACTATGTACAGTTAAGGTTTCTTTTCGGTAGATTCTTTACATGAGCAAGAGCAAGAGCATTAGCAAGATATAGGCCTGTAAATAGCTCATTTGGGTCATTTGACAAATTGTTTATTTATTATTTAAAAAGCAAAAAGAAAGGCACAATCTGGGAAAGAGATTGGACTTTTTAACACTCCCAAAGATTCCAACTCTTCTGATTACATTGCCTTTTTCTTTTCGTCCTTTTACAGTGCTCAGGGTTCTTATTGTTTCCATCAAAATTACAGTAAAAGAAACATCTTTTTCTCTATTGGTCACTCTTTTGCCCTTCTCTTCTTCTTTACTCCATCTTTGATATCTTCTCCCCACTTACAGAGTGACTCTGTTTTCTTCAGGTCCGGATTTTGCTGTTAAAAAAAAAGGGTAAATCTTGTGGCCATCGCCGGAGCATTACATTACAGCTCTTGCTCCGGCCAAATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGATTTCTAAGATGGGAATCGTTGATAGTTGGATTATTAGCTCAAAATTTTCTCTGGAATTTTCTTCTTTTTTTTTCCCTTCATTTGATTCTTTTTTCTTCCGCTGTCCGAATTAGAAAATTTGTGAAACTCTCTTAAATGTAATGCCATTTTTCTGTCAGCTTTTCTCCATCAAATTCGGAAGCTTGATTTCAAGTTTTAGTATCTATTGCACTTGAGAGAGAATGTGTTATTCGATCGAAATTTTGGTCAATAGCTTCTTGTGTTTGAATTCACTCTTTCTATGAAGATTTTCCTTTAACTTTCGCT ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNPSANA
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: KGN62547.1 (hypothetical protein Csa_2G360640 [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_022144319.1 (uncharacterized protein LOC111014030 [Momordica charantia]) HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_023537357.1 (uncharacterized protein LOC111798443 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21 Identity = 73/94 (77.66%), Postives = 77/94 (81.91%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_023002021.1 (uncharacterized protein LOC111496028 [Cucurbita maxima]) HSP 1 Score: 106.3 bits (264), Expect = 7.7e-20 Identity = 73/95 (76.84%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_008220152.1 (PREDICTED: uncharacterized protein LOC103320276 [Prunus mume]) HSP 1 Score: 102.8 bits (255), Expect = 8.5e-19 Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TAIR10
Match: AT2G26520.1 (unknown protein) HSP 1 Score: 68.9 bits (167), Expect = 2.5e-12 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A0A0LP67|A0A0A0LP67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360640 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A061FJB6|A0A061FJB6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_033911 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17 Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A2G9HSF1|A0A2G9HSF1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06867 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17 Identity = 47/86 (54.65%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A2P5ANF4|A0A2P5ANF4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315310 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15 Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A251RCE8|A0A251RCE8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G441900 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15 Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |