CsaV3_2G028190 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G028190
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionWAS protein family homolog 1-like
Locationchr2 : 18599286 .. 18600735 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAAACCTTTTGATCTCTTCTGATATCCAAACTTCATTTATTCGGACTCCATAACTGTGTTTAATCATATAGATCGGAAGTTTTAAGATGCATAACAAAGCAAAAGGAAAAAAAAACCAAAAAGGCAAAGAAATGAGAGATTAGAAATCAGAGGCTTCACGTGACAGTACTGGCATTTCAGCCAATGTTACGTAGCCAGTTTCTGTAGGGCTGGAACAGATTCTATAAAATTATGCTTTGTTTGCACTTATTATTTGTTTTTTATCCATTTTTATAGTTAAAAAACAGTAACTTTTGAAACTATGTACAGTTAAGGTTTCTTTTCGGTAGATTCTTTACATGAGCAAGAGCAAGAGCATTAGCAAGATATAGGCCTGTAAATAGCTCATTTGGGTCATTTGACAAATTGTTTATTTATTATTTAAAAAGCAAAAAGAAAGGCACAATCTGGGAAAGAGATTGGACTTTTTAACACTCCCAAAGATTCCAACTCTTCTGATTACATTGCCTTTTTCTTTTCGTCCTTTTACAGTGCTCAGGGTTCTTATTGTTTCCATCAAAATTACAGTAAAAGAAACATCTTTTTCTCTATTGGTCACTCTTTTGCCCTTCTCTTCTTCTTTACTCCATCTTTGATATCTTCTCCCCACTTACAGAGTGACTCTGTTTTCTTCAGGTCCGGATTTTGCTGTTAAAAAAAAAGGGTAAATCTTGTGGCCATCGCCGGAGCATTACATTACAGCTCTTGCTCCGGCCAAATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGATTTCTAAGATGGGAATCGTTGATAGTTGGATTATTAGCTCAAAATTTTCTCTGGAATTTTCTTCTTTTTTTTTCCCTTCATTTGATTCTTTTTTCTTCCGCTGTCCGAATTAGAAAATTTGTGAAACTCTCTTAAATGTAATGCCATTTTTCTGTCAGCTTTTCTCCATCAAATTCGGAAGCTTGATTTCAAGTTTTAGTATCTATTGCACTTGAGAGAGAATGTGTTATTCGATCGAAATTTTGGTCAATAGCTTCTTGTGTTTGAATTCACTCTTTCTATGAAGATTTTCCTTTAACTTTCGCT

mRNA sequence

ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA

Coding sequence (CDS)

ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA

Protein sequence

MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNPSANA
BLAST of CsaV3_2G028190 vs. NCBI nr
Match: KGN62547.1 (hypothetical protein Csa_2G360640 [Cucumis sativus])

HSP 1 Score: 158.3 bits (399), Expect = 1.7e-35
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 60
          MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH
Sbjct: 1  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 60

Query: 61 FDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          FDLESWAETKCSSCIDGRITPPPPRVDASTTA
Sbjct: 61 FDLESWAETKCSSCIDGRITPPPPRVDASTTA 92

BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_022144319.1 (uncharacterized protein LOC111014030 [Momordica charantia])

HSP 1 Score: 127.9 bits (320), Expect = 2.5e-26
Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0

Query: 1  MSLPIEQQSP--PGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGY 60
          MSLPIEQQSP  PGMQQ Y GH  +GSVGPV  XXXXXXXXXXXXXXVGRLCSG++IMGY
Sbjct: 1  MSLPIEQQSPPAPGMQQPYGGHLSNGSVGPVIGXXXXXXXXXXXXXXVGRLCSGKTIMGY 60

Query: 61 GHFDLESWAETKCSSCIDGRITPPPPR--VDASTTA 93
          GHFDLESWAETKCSSCIDGRI+PPPPR  V A+TTA
Sbjct: 61 GHFDLESWAETKCSSCIDGRISPPPPRANVSAATTA 96

BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_023537357.1 (uncharacterized protein LOC111798443 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 112.5 bits (280), Expect = 1.1e-21
Identity = 73/94 (77.66%), Postives = 77/94 (81.91%), Query Frame = 0

Query: 1  MSLPIEQQSP--PGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGY 60
          MSLPI+QQSP  PGMQQ Y      GSVGPV  XXXXXXXXXXXXXXVGRLCSGRSIMGY
Sbjct: 1  MSLPIDQQSPPAPGMQQPY-----GGSVGPVIGXXXXXXXXXXXXXXVGRLCSGRSIMGY 60

Query: 61 GHFDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          GHFDLE WAE KCSSCIDGR++ P PRV+ ST A
Sbjct: 61 GHFDLERWAEVKCSSCIDGRVSSPSPRVNVSTAA 89

BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_023002021.1 (uncharacterized protein LOC111496028 [Cucurbita maxima])

HSP 1 Score: 106.3 bits (264), Expect = 7.7e-20
Identity = 73/95 (76.84%), Postives = 76/95 (80.00%), Query Frame = 0

Query: 1  MSLPIEQQSP--PGMQQNYVGHPGSGS-VGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMG 60
          MSLPI+QQSP  PGMQQ Y GH  SG      XXXXXXXXXXXXXXXX GRLCSGRSIMG
Sbjct: 1  MSLPIDQQSPPAPGMQQPYGGHASSGGXXXXXXXXXXXXXXXXXXXXXXGRLCSGRSIMG 60

Query: 61 YGHFDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          YGHFDLE WAE KCSSCIDGRI+ P PRV+ ST A
Sbjct: 61 YGHFDLERWAEVKCSSCIDGRISSPSPRVNVSTAA 95

BLAST of CsaV3_2G028190 vs. NCBI nr
Match: XP_008220152.1 (PREDICTED: uncharacterized protein LOC103320276 [Prunus mume])

HSP 1 Score: 102.8 bits (255), Expect = 8.5e-19
Identity = 51/94 (54.26%), Postives = 61/94 (64.89%), Query Frame = 0

Query: 1  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGY 60
          MS+P++QQ PP   +QQN   H   GS+G V                +GRLCSGRSIMGY
Sbjct: 1  MSMPLDQQPPPDFVLQQNANPHSPHGSIGAVVAVLVGVIILGVVAVVIGRLCSGRSIMGY 60

Query: 61 GHFDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          GH+DLESWAETKCSSCIDGRI PP  R + S ++
Sbjct: 61 GHYDLESWAETKCSSCIDGRINPPLSRPNVSCSS 94

BLAST of CsaV3_2G028190 vs. TAIR10
Match: AT2G26520.1 (unknown protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.5e-12
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0

Query: 2  SLPIEQQSPPGMQ----QNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMG 61
          S+P+  Q PP  +     + V   G+ ++GP                 +GRLCSG++I+G
Sbjct: 3  SMPLYWQPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILG 62

Query: 62 YGHFDLESWAETKCSSCIDGRI 80
          YG +D+E WAE++C SCIDG I
Sbjct: 63 YGDYDMERWAESRCGSCIDGHI 84

BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A0A0LP67|A0A0A0LP67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360640 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 60
          MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH
Sbjct: 1  MSLPIEQQSPPGMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 60

Query: 61 FDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          FDLESWAETKCSSCIDGRITPPPPRVDASTTA
Sbjct: 61 FDLESWAETKCSSCIDGRITPPPPRVDASTTA 92

BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A061FJB6|A0A061FJB6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_033911 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 57/94 (60.64%), Postives = 68/94 (72.34%), Query Frame = 0

Query: 1  MSLPIEQQSPP-GMQQNYVGHPGS-GSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGY 60
          MS+P+ QQ PP  + Q Y  H  +  S+GPV   XXXXXXXX     +GRLC+GR IMGY
Sbjct: 1  MSMPLVQQPPPVTVTQPYNSHATTHASIGPVIAVXXXXXXXXILAGMIGRLCTGRKIMGY 60

Query: 61 GHFDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          G +D+ESW ETKCSSCIDGRI PPPPR +AS T+
Sbjct: 61 GQYDIESWIETKCSSCIDGRIYPPPPRANASGTS 94

BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A2G9HSF1|A0A2G9HSF1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06867 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 47/86 (54.65%), Postives = 53/86 (61.63%), Query Frame = 0

Query: 4  PIEQQSPPGM---QQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 63
          P++QQ  P M   QQ Y  H G GSVGPV                +GRLCSGR I GYG 
Sbjct: 10 PLQQQQAPPMETTQQAYRTHTGHGSVGPVIGVLAIITILGAIAVMIGRLCSGRGIRGYGQ 69

Query: 64 FDLESWAETKCSSCIDGRITPPPPRV 87
          +D ESW ETKC+SCIDGR+ PPPPRV
Sbjct: 70 YDFESWVETKCASCIDGRVDPPPPRV 95

BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A2P5ANF4|A0A2P5ANF4_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315310 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 0

Query: 2  SLPIEQQSPP-GMQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGYGH 61
          SLP+ QQ+PP  +   +V H    SVGPV                VGRLCSG+ IMGYG 
Sbjct: 3  SLPLNQQAPPLEVVSQHVSH--GPSVGPVVAVLAVILILGAMAVMVGRLCSGKRIMGYGQ 62

Query: 62 FDLESWAETKCSSCIDGRI--TPPPPRVDASTTA 93
          FDLESWAETKCSSCIDGRI    P PR +AS T+
Sbjct: 63 FDLESWAETKCSSCIDGRIHANAPLPRANASATS 94

BLAST of CsaV3_2G028190 vs. TrEMBL
Match: tr|A0A251RCE8|A0A251RCE8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G441900 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-15
Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 0

Query: 1  MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVXXXXXXXXXXXXXXXXVGRLCSGRSIMGY 60
          MS+P++QQ PP   +QQN   H         XXXXXXXXXXXXXXXX+GRLCSGRSI+GY
Sbjct: 1  MSMPLDQQPPPDFVLQQNANPHXXXXXXXXXXXXXXXXXXXXXXXXXIGRLCSGRSIIGY 60

Query: 61 GHFDLESWAETKCSSCIDGRITPPPPRVDASTTA 93
          GH+DLESWAETKCSSCIDGRI PP  R + S ++
Sbjct: 61 GHYDLESWAETKCSSCIDGRINPPLSRPNVSCSS 94

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN62547.11.7e-35100.00hypothetical protein Csa_2G360640 [Cucumis sativus][more]
XP_022144319.12.5e-2683.33uncharacterized protein LOC111014030 [Momordica charantia][more]
XP_023537357.11.1e-2177.66uncharacterized protein LOC111798443 [Cucurbita pepo subsp. pepo][more]
XP_023002021.17.7e-2076.84uncharacterized protein LOC111496028 [Cucurbita maxima][more]
XP_008220152.18.5e-1954.26PREDICTED: uncharacterized protein LOC103320276 [Prunus mume][more]
Match NameE-valueIdentityDescription
AT2G26520.12.5e-1237.80unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LP67|A0A0A0LP67_CUCSA1.1e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360640 PE=4 SV=1[more]
tr|A0A061FJB6|A0A061FJB6_THECC1.8e-1760.64Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_033911 PE=4 SV=1[more]
tr|A0A2G9HSF1|A0A2G9HSF1_9LAMI1.8e-1754.65Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06867 P... [more]
tr|A0A2P5ANF4|A0A2P5ANF4_PARAD1.7e-1554.26Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315310 PE... [more]
tr|A0A251RCE8|A0A251RCE8_PRUPE2.2e-1565.96Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G441900 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:1902589 single-organism organelle organization
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0044430 cytoskeletal part
cellular_component GO:0015630 microtubule cytoskeleton
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G028190.1CsaV3_2G028190.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..124
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 4..122
NoneNo IPR availablePANTHERPTHR33429:SF1EXPRESSED PROTEINcoord: 4..122

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_2G028190CsaV3_7G008810Cucumber (Chinese Long) v3cuccucB100