Cucsa.232610 (gene) Cucumber (Gy14) v1

NameCucsa.232610
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTransmembrane protein, putative
Locationscaffold01989 : 488500 .. 488874 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAaCTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA

mRNA sequence

ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGgtcattggagtcctcatcgtcatcattgtgtttgccgtcgtcgccgtcgttgttgGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA

Coding sequence (CDS)

ATGTCACTCCCAATTGAACAACAATCTCCGCCGGGAATGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCATCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTTGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGCCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTTGCATTGACGGAAGGATAACCCCACCACCGCCGAGGGTCGATGCCTCCACCACTGCCGCCGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAaCTAAGCAAGAAGAACCAGCTTCTCAAAATCCATCTGCCAACGCTTGA

Protein sequence

MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNPSANA*
BLAST of Cucsa.232610 vs. TrEMBL
Match: A0A0A0LP67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360640 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 5.3e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120
           FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120

Query: 121 SANA 125
           SANA
Sbjct: 121 SANA 124

BLAST of Cucsa.232610 vs. TrEMBL
Match: M5XJE5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020468mg PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 1

Query: 7   QQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLE 66
           QQ PP   +QQN   H   GS+G V+ VL+V+I+  VVAVV+GRLCSGRSI+GYGH+DLE
Sbjct: 1   QQPPPDFVLQQNANPHSPHGSIGAVVAVLVVVIILGVVAVVIGRLCSGRSIIGYGHYDLE 60

Query: 67  SWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 121
           SWAETKCSSCIDGRI PP  R + S ++ ++S PA T       E +QEE + Q P
Sbjct: 61  SWAETKCSSCIDGRINPPLSRPNVSCSSVSTSTPAQT---HQGSELQQEEQSPQTP 113

BLAST of Cucsa.232610 vs. TrEMBL
Match: U5FNP0_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s03470g PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-27
Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 1

Query: 8   QSPPGMQ---QNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLE 67
           Q PP M    Q++  +    S+GP I VL+VI+VF V+AV+VGRLCSGR IMGYG +D+E
Sbjct: 75  QQPPPMSVTPQSFNTYSTHASIGPAIAVLVVIMVFGVLAVMVGRLCSGRRIMGYGQYDME 134

Query: 68  SWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNPSAN 124
           SWAE KCSSCIDGRI+PP  R     T++++S PA      TQQETKQEE + Q+P  N
Sbjct: 135 SWAEVKCSSCIDGRISPPLSRSSVPATSSSASTPA-----QTQQETKQEEQSPQHPPEN 188

BLAST of Cucsa.232610 vs. TrEMBL
Match: B9R7I2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591930 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-27
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 1

Query: 1   MSLPIEQQSPPGM---QQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 60
           MS+P+ QQ PP +   Q+ +  H   GS+GP+I VL+VI++  V+AV++GRLCSGR I+G
Sbjct: 1   MSMPLTQQ-PPAVTVAQEPFSTHSTHGSIGPLIVVLVVIMILGVLAVMIGRLCSGRRILG 60

Query: 61  YGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPAS 120
           YG +D+ESWAETKC+SCIDGRI+ P PR +   T+ +S LP     V   QETKQEE + 
Sbjct: 61  YGQYDIESWAETKCASCIDGRISSPAPRSNPFVTSGSSPLP-----VQIHQETKQEEQSP 117

BLAST of Cucsa.232610 vs. TrEMBL
Match: A5AWI6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011909 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-26
Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1

Query: 1    MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
            MS+P++Q   P    +Y  +   GSVGPVI VL VI +   +A +VGRLCSGR I G+G 
Sbjct: 1497 MSMPLDQLQQPPPSLSYTXYSRHGSVGPVIAVLAVIAILGTLAAIVGRLCSGRRIXGHGQ 1556

Query: 61   FDLESWAETKCSSCIDGRITPPP-PRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQN 120
            +D+ESW E KCSSCIDGR+ PPP P  D S  +   S+P     + TQ+ETK +EP+SQN
Sbjct: 1557 YDIESWLEEKCSSCIDGRVNPPPLPSADISAGSVPLSIP-----IHTQEETKPDEPSSQN 1612

BLAST of Cucsa.232610 vs. TAIR10
Match: AT2G26520.1 (AT2G26520.1 unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 1

Query: 2   SLPIEQQSPPGMQ----QNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 61
           S+P+  Q PP  +     + V   G+ ++GP I V IV+ V  V+A V+GRLCSG++I+G
Sbjct: 3   SMPLYWQPPPATEVSQDSSSVSSAGNSTIGPFIAVFIVVTVLCVLASVIGRLCSGKTILG 62

Query: 62  YGHFDLESWAETKCSSCIDGRI---------TPPPPRVDASTTAAASSLPAGTMA----- 121
           YG +D+E WAE++C SCIDG I         TPPP +    T++  S+   G +A     
Sbjct: 63  YGDYDMERWAESRCGSCIDGHIHPHRPSPSPTPPPRQPLHHTSSGVSAESEGHVADLDHE 122

Query: 122 -VGTQQETKQEEPASQNPSA 123
             G +Q++   EP  Q PS+
Sbjct: 123 TDGEKQDSLDHEPPQQTPSS 142

BLAST of Cucsa.232610 vs. TAIR10
Match: AT3G57500.1 (AT3G57500.1 unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09
Identity = 33/80 (41.25%), Postives = 41/80 (51.25%), Query Frame = 1

Query: 25  SVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI----- 84
           S+  ++ VL VI + +V+A V  RLC GR +   G  D+E W E KC SCID  I     
Sbjct: 37  SIETLVVVLAVITILSVLAGVFARLCGGRHLSHGGDHDIEGWVERKCRSCIDAGIPAVSA 96

Query: 85  TPPPPRVDASTTAAASSLPA 100
            P PP      TA   S PA
Sbjct: 97  APSPPPPPPPATAEERSKPA 116

BLAST of Cucsa.232610 vs. NCBI nr
Match: gi|700207428|gb|KGN62547.1| (hypothetical protein Csa_2G360640 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 7.6e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1

Query: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120
           FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120

Query: 121 SANA 125
           SANA
Sbjct: 121 SANA 124

BLAST of Cucsa.232610 vs. NCBI nr
Match: gi|659087815|ref|XP_008444649.1| (PREDICTED: uncharacterized protein LOC103487920 [Cucumis melo])

HSP 1 Score: 241.9 bits (616), Expect = 6.0e-61
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 1

Query: 1   MSLPIEQQSPPGMQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGH 60
           MS PIEQQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGH
Sbjct: 1   MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGH 60

Query: 61  FDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 120
           FDLESWAETKCSSCIDGRITPPPPRVDAS TAAASSLPAGTMAVGTQQETKQEEPASQNP
Sbjct: 61  FDLESWAETKCSSCIDGRITPPPPRVDAS-TAAASSLPAGTMAVGTQQETKQEEPASQNP 120

Query: 121 SANA 125
           SANA
Sbjct: 121 SANA 123

BLAST of Cucsa.232610 vs. NCBI nr
Match: gi|645226679|ref|XP_008220152.1| (PREDICTED: uncharacterized protein LOC103320276 [Prunus mume])

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 69/122 (56.56%), Postives = 87/122 (71.31%), Query Frame = 1

Query: 1   MSLPIEQQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGY 60
           MS+P++QQ PP   +QQN   H   GS+G V+ VL+ +I+  VVAVV+GRLCSGRSIMGY
Sbjct: 1   MSMPLDQQPPPDFVLQQNANPHSPHGSIGAVVAVLVGVIILGVVAVVIGRLCSGRSIMGY 60

Query: 61  GHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQ 120
           GH+DLESWAETKCSSCIDGRI PP  R + S ++ ++S PA T       E +QEE + Q
Sbjct: 61  GHYDLESWAETKCSSCIDGRINPPLSRPNVSCSSVSTSTPAQT---HQGSELQQEEQSPQ 119

BLAST of Cucsa.232610 vs. NCBI nr
Match: gi|1009136293|ref|XP_015885455.1| (PREDICTED: uncharacterized protein LOC107420905 [Ziziphus jujuba])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-29
Identity = 71/126 (56.35%), Postives = 91/126 (72.22%), Query Frame = 1

Query: 1   MSLPIEQQSPPG---MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMG 60
           M++P+ +Q PP    +QQ +  H   GS+GP+I VL+VIIV  ++AV+VGRLCSG+S+MG
Sbjct: 1   MAMPLYEQPPPPAFTVQQPHSTHSAHGSIGPLIAVLVVIIVLGILAVMVGRLCSGKSMMG 60

Query: 61  YGHFDLESWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPAS 120
           YG FDLESWAE KCSSCIDG+I  P PR + S   + +S+P  TM V T QE  QEE +S
Sbjct: 61  YGQFDLESWAERKCSSCIDGKINSPLPRTNIS---SCNSVPI-TMPVETHQEIDQEELSS 120

Query: 121 QNPSAN 124
            NPSAN
Sbjct: 121 PNPSAN 122

BLAST of Cucsa.232610 vs. NCBI nr
Match: gi|596264395|ref|XP_007225003.1| (hypothetical protein PRUPE_ppa020468mg, partial [Prunus persica])

HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27
Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = 1

Query: 7   QQSPPG--MQQNYVGHPGSGSVGPVIGVLIVIIVFAVVAVVVGRLCSGRSIMGYGHFDLE 66
           QQ PP   +QQN   H   GS+G V+ VL+V+I+  VVAVV+GRLCSGRSI+GYGH+DLE
Sbjct: 1   QQPPPDFVLQQNANPHSPHGSIGAVVAVLVVVIILGVVAVVIGRLCSGRSIIGYGHYDLE 60

Query: 67  SWAETKCSSCIDGRITPPPPRVDASTTAAASSLPAGTMAVGTQQETKQEEPASQNP 121
           SWAETKCSSCIDGRI PP  R + S ++ ++S PA T       E +QEE + Q P
Sbjct: 61  SWAETKCSSCIDGRINPPLSRPNVSCSSVSTSTPAQT---HQGSELQQEEQSPQTP 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LP67_CUCSA5.3e-64100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360640 PE=4 SV=1[more]
M5XJE5_PRUPE2.3e-2756.90Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020468mg PE=4 S... [more]
U5FNP0_POPTR4.0e-2755.46Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0014s03470g P... [more]
B9R7I2_RICCO5.2e-2752.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591930 PE=4 SV=1[more]
A5AWI6_VITVI1.2e-2651.24Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011909 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G26520.11.0e-2138.57 unknown protein[more]
AT3G57500.11.9e-0941.25 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700207428|gb|KGN62547.1|7.6e-64100.00hypothetical protein Csa_2G360640 [Cucumis sativus][more]
gi|659087815|ref|XP_008444649.1|6.0e-6196.77PREDICTED: uncharacterized protein LOC103487920 [Cucumis melo][more]
gi|645226679|ref|XP_008220152.1|2.1e-2956.56PREDICTED: uncharacterized protein LOC103320276 [Prunus mume][more]
gi|1009136293|ref|XP_015885455.1|3.6e-2956.35PREDICTED: uncharacterized protein LOC107420905 [Ziziphus jujuba][more]
gi|596264395|ref|XP_007225003.1|3.3e-2756.90hypothetical protein PRUPE_ppa020468mg, partial [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.232610.1Cucsa.232610.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33429FAMILY NOT NAMEDcoord: 1..119
score: 1.9
NoneNo IPR availablePANTHERPTHR33429:SF5SUBFAMILY NOT NAMEDcoord: 1..119
score: 1.9

The following gene(s) are paralogous to this gene:

None