CsaV3_4G005160 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G005160
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	transmembrane protein 97-like
Location	chr4 : 3389482 .. 3390072 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGTATCTTACTTTTCCTTGTCATTGTTTTCCAATTCTACTTCTTTGAAAATGGAAGAGTAAGCTTTACACTTTCCTTCTTCTCAGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

mRNA sequence

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

Coding sequence (CDS)

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

Protein sequence

MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

Homology

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BLAST of CsaV3_4G005160 vs. NCBI nr
Match: XP_004149168.1 (PREDICTED: transmembrane protein 97 [Cucumis sativus] >KGN53261.1 hypothetical protein Csa_4G038780 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 6.4e-86
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsaV3_4G005160 vs. NCBI nr
Match: XP_008453730.1 (PREDICTED: transmembrane protein 97-like [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 1.0e-75
Identity = 149/168 (88.69%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsaV3_4G005160 vs. NCBI nr
Match: XP_022929300.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 1.5e-63
Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 167

[Close]

BLAST of CsaV3_4G005160 vs. NCBI nr
Match: XP_023553153.1 (sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.0 bits (637), Expect = 5.8e-63
Identity = 129/167 (77.25%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFV F VHA+APPLI AQLLLP  LFP++ I  K  YI  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 167

[Close]

BLAST of CsaV3_4G005160 vs. NCBI nr
Match: XP_022985078.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 247.7 bits (631), Expect = 2.9e-62
Identity = 126/167 (75.45%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFV   VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLF+AM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMVAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 167

[Close]

BLAST of CsaV3_4G005160 vs. TAIR10
Match: AT2G32380.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-36
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA  KL D+VLF++F + A+  PLI  Q  LP  +FP   + L   YI   GDYL+ + 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELLL WPL+++N+YAI   KSW  TT ++YG S+ ++MAAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL +Y PF+ VG+LA+LRGLL + NK +    G  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNK-SGGAVGKRPAILARRK 166

[Close]

BLAST of CsaV3_4G005160 vs. TAIR10
Match: AT1G05210.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 147.5 bits (371), Expect = 7.4e-36
Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA+ KL D  LFV+F+  A+  PLI  Q  LP  ++P     LK+KYI   GDYL+ + 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELL  WPL++ N+YAI   KSW  TTCL+YG SL ++MAAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL +Y PF+  G+LA+LRGL+ R  K  T   G   +I  ++K
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTK-NTGSSGKRSTIMPRRK 166

[Close]

BLAST of CsaV3_4G005160 vs. TAIR10
Match: AT1G05220.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +   LK+ Y +   DYL  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT 154
            +  LL  Y PF+ + +LAMLRGL+    K +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRST 152

[Close]

BLAST of CsaV3_4G005160 vs. Swiss-Prot
Match: sp|Q6DFQ5|SGMR2_XENTR (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06
Identity = 40/154 (25.97%), Postives = 70/154 (45.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           M    +L + + F +F  H     L+  Q +LP +L+P   + L   Y     D+LMA+ 
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLIYGVSLFSAMAAIAAELIG-- 120
           PP+F   ++ E +LQ P   +  YA       W+    ++Y   + + + AI   ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SQRASGILLTIYFPFLAVGVLAML 142
                     +Q+    L++IY P+L V VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of CsaV3_4G005160 vs. TrEMBL
Match: tr|A0A0A0KZE5|A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.2e-86
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsaV3_4G005160 vs. TrEMBL
Match: tr|A0A1S3BWY8|A0A1S3BWY8_CUCME (transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.7e-76
Identity = 149/168 (88.69%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsaV3_4G005160 vs. TrEMBL
Match: tr|A0A0A0K5K2|A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 99/168 (58.93%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA LKL D +LF+ FL+ A+  PLI  QL+ P TLFP+  I LK  Y    GDYLMA+ 
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPF VGL+WLEL  QWP+ LLNLYA   SK W +TTCLIYGVS+ S+M+A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           AS  LLTIY+PFL +GVLAMLRGL+P  +KA  T  G  PS   KK+A
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAIT--GTRPSNGRKKRA 166

[Close]

BLAST of CsaV3_4G005160 vs. TrEMBL
Match: tr|M5WRG5|M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G218400 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 8.9e-44
Identity = 97/168 (57.74%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA++KL D+ LFVFF V ALA PLI AQ  LPQ+LFPN+ + LK+ Y    GDYL+   
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I  +KSW +TTCLIYGVS+F++M  I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           AS  LL +YFPFL +GVLA+LRGLLP  +  T++G G  P++  KKKA
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKKA 167

[Close]

BLAST of CsaV3_4G005160 vs. TrEMBL
Match: tr|A0A2I4FME0|A0A2I4FME0_9ROSI (transmembrane protein 97-like OS=Juglans regia OX=51240 GN=LOC109000401 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 9.8e-43
Identity = 98/167 (58.68%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA L L D+VLF+FF+V A+A PLI AQ+ LP  L P++ + L N Y    GDYL+A+ 
Sbjct: 1   MGAFLNLVDAVLFLFFVVIAVAAPLIDAQMCLPAGLLPDLLVDLNNWYTREYGDYLVAEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVG++WLELL QWPL LLNLY I   K W +TTCLIYGVS F+ MAAI +EL+GSQ+
Sbjct: 61  PHFFVGIVWLELLFQWPLALLNLYGILGGKPWFNTTCLIYGVSCFTCMAAILSELMGSQK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL  YFPF+ +GVLA LRGLLP   K TTT  G  P +  KK+
Sbjct: 121 ASDKLLMTYFPFMGLGVLAFLRGLLPHSGKTTTT-IGKRPLLGRKKR 166

The following BLAST results are available for this feature:

BLAST of CsaV3_4G005160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149168.1	6.4e-86	100.00	PREDICTED: transmembrane protein 97 [Cucumis sativus] >KGN53261.1 hypothetical p...	[more]
XP_008453730.1	1.0e-75	88.69	PREDICTED: transmembrane protein 97-like [Cucumis melo]	[more]
XP_022929300.1	1.5e-63	76.65	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
XP_023553153.1	5.8e-63	77.25	sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985078.1	2.9e-62	75.45	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]

BLAST of CsaV3_4G005160 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32380.1	2.5e-36	48.50	Transmembrane protein 97, predicted	[more]
AT1G05210.1	7.4e-36	48.50	Transmembrane protein 97, predicted	[more]
AT1G05220.1	2.3e-29	44.44	Transmembrane protein 97, predicted	[more]

BLAST of CsaV3_4G005160 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6DFQ5\|SGMR2_XENTR	3.4e-06	25.97	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of CsaV3_4G005160 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZE5\|A0A0A0KZE5_CUCSA	4.2e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1	[more]
tr\|A0A1S3BWY8\|A0A1S3BWY8_CUCME	6.7e-76	88.69	transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1	[more]
tr\|A0A0A0K5K2\|A0A0A0K5K2_CUCSA	4.0e-44	58.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1	[more]
tr\|M5WRG5\|M5WRG5_PRUPE	8.9e-44	57.74	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G218400 PE=4 SV=1	[more]
tr\|A0A2I4FME0\|A0A2I4FME0_9ROSI	9.8e-43	58.68	transmembrane protein 97-like OS=Juglans regia OX=51240 GN=LOC109000401 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033118	EXPERA
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G005160.1	CsaV3_4G005160.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 e-value: 8.8E-25 score: 87.7
None	No IPR available	PANTHER	PTHR31204:SF1	TRANSMEMBRANE PROTEIN 97	coord: 4..152
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 4..152
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..157 e-value: 5.1E-26 score: 89.2
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 15.148

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G005160	CSPI04G05040	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G005160	Cucsa.201310	Cucumber (Gy14) v1	cgycucB323
CsaV3_4G005160	CmaCh16G006540	Cucurbita maxima (Rimu)	cmacucB0393
CsaV3_4G005160	CmoCh16G007110	Cucurbita moschata (Rifu)	cmocucB0388
CsaV3_4G005160	Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpecucB0266
CsaV3_4G005160	CsGy4G004960	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G005160	Carg05772	Silver-seed gourd	carcucB1063
CsaV3_4G005160	Cla014531	Watermelon (97103) v1	cucwmB322
CsaV3_4G005160	MELO3C017552	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G005160	ClCG07G009050	Watermelon (Charleston Gray)	cucwcgB344
CsaV3_4G005160	Lsi07G002130	Bottle gourd (USVL1VR-Ls)	cuclsiB322
CsaV3_4G005160	MELO3C017552.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G005160	Cla97C00G000060	Watermelon (97103) v2	cucwmbB289

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G005160	Silver-seed gourd	carcucB0982
CsaV3_4G005160	Cucurbita maxima (Rimu)	cmacucB0847
CsaV3_4G005160	Cucurbita moschata (Rifu)	cmocucB0833
CsaV3_4G005160	Cucurbita pepo (Zucchini)	cpecucB0497
CsaV3_4G005160	Melon (DHL92) v3.5.1	cucmeB273
CsaV3_4G005160	Watermelon (97103) v2	cucwmbB330
CsaV3_4G005160	Wax gourd	cucwgoB381