CsGy4G004960 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G004960
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transmembrane protein 97-like
Location	Chr4 : 3507920 .. 3508510 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGTATCTTACTTTTCCTTGTCATTGTTTTCCAATTCTACTTCTTTGAAAATGGAAGAGTAAGCTTTACACTTTCCTTCTTCTCAGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

mRNA sequence

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

Coding sequence (CDS)

ATGGGGGCTGTTCTCAAGCTCTTCGACTCAGTTCTATTTGTGTTCTTCCTTGTACATGCATTGGCACCTCCTCTCATCAGCGCCCAGTTATTACTCCCTCAAACCCTTTTCCCCAATATTTTCATTCATTTAAAAAATAAATACATTACCCACTCTGGAGATTATCTGATGGCCGATCTCCCTCCCTTTTTCGTCGGCTTGCTTTGGCTCGAGCTTCTTCTTCAATGGCCACTCACGCTTCTCAACCTCTACGCCATCCCCACTTCGAAGTCATGGCTGCACACAACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCTGCTGAATTGATTGGTTCACAGAGAGCATCTGGTATACTGTTGACTATATATTTCCCTTTTTTGGCGGTGGGAGTTCTCGCCATGCTTCGTGGGTTGCTGCCGCGTTGCAACAAGGCTACAACCACCGGCCACGGTGCTGGACCATCAATTGCTACAAAGAAAAAGGCTTGA

Protein sequence

MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADLPPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQRASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA

Homology

[Close]

BLAST of CsGy4G004960 vs. NCBI nr
Match: XP_004149168.1 (PREDICTED: transmembrane protein 97 [Cucumis sativus] >KGN53261.1 hypothetical protein Csa_4G038780 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsGy4G004960 vs. NCBI nr
Match: XP_008453730.1 (PREDICTED: transmembrane protein 97-like [Cucumis melo])

HSP 1 Score: 291.2 bits (744), Expect = 2.3e-75
Identity = 149/168 (88.69%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsGy4G004960 vs. NCBI nr
Match: XP_022929300.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 2.6e-63
Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 167

[Close]

BLAST of CsGy4G004960 vs. NCBI nr
Match: XP_023553153.1 (sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 9.8e-63
Identity = 129/167 (77.25%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFV F VHA+APPLI AQLLLP  LFP++ I  K  YI  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Sbjct: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 167

[Close]

BLAST of CsGy4G004960 vs. NCBI nr
Match: XP_022985078.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-62
Identity = 126/167 (75.45%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG +LKLFDSVLFV   VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLF+AM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMVAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 167

[Close]

BLAST of CsGy4G004960 vs. TAIR10
Match: AT2G32380.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 148.3 bits (373), Expect = 4.3e-36
Identity = 81/167 (48.50%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA  KL D+VLF++F + A+  PLI  Q  LP  +FP   + L   YI   GDYL+ + 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELLL WPL+++N+YAI   KSW  TT ++YG S+ ++MAAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL +Y PF+ VG+LA+LRGLL + NK +    G  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNK-SGGAVGKRPAILARRK 166

[Close]

BLAST of CsGy4G004960 vs. TAIR10
Match: AT1G05210.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA+ KL D  LFV+F+  A+  PLI  Q  LP  ++P     LK+KYI   GDYL+ + 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F VGL+W ELL  WPL++ N+YAI   KSW  TTCL+YG SL ++MAAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL +Y PF+  G+LA+LRGL+ R  K  T   G   +I  ++K
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTK-NTGSSGKRSTIMPRRK 166

[Close]

BLAST of CsGy4G004960 vs. TAIR10
Match: AT1G05220.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 125.9 bits (315), Expect = 2.3e-29
Identity = 68/153 (44.44%), Postives = 101/153 (66.01%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA+ KL +  LF FF + A+  PL++ Q+L P  ++P +   LK+ Y +   DYL  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVGL+W E++   PL+++N+YAI TSKSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATT 154
            +  LL  Y PF+ + +LAMLRGL+    K +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRST 152

[Close]

BLAST of CsGy4G004960 vs. Swiss-Prot
Match: sp|Q6DFQ5|SGMR2_XENTR (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06
Identity = 40/154 (25.97%), Postives = 70/154 (45.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           M    +L + + F +F  H     L+  Q +LP +L+P   + L   Y     D+LMA+ 
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYA-IPTSKSWLHTTCLIYGVSLFSAMAAIAAELIG-- 120
           PP+F   ++ E +LQ P   +  YA       W+    ++Y   + + + AI   ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SQRASGILLTIYFPFLAVGVLAML 142
                     +Q+    L++IY P+L V VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

[Close]

BLAST of CsGy4G004960 vs. TrEMBL
Match: tr|A0A0A0KZE5|A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 9.3e-86
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsGy4G004960 vs. TrEMBL
Match: tr|A0A1S3BWY8|A0A1S3BWY8_CUCME (transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-75
Identity = 149/168 (88.69%), Postives = 157/168 (93.45%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MG+ LKLF+SVLFVFFLVHALAPPLI AQLLLPQTLFP+I IH KN+YITHSGDYLMA+ 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           ASGILLTIY PFL +GV AMLRGLLP C KATTTGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of CsGy4G004960 vs. TrEMBL
Match: tr|A0A0A0K5K2|A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.8e-44
Identity = 99/168 (58.93%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA LKL D +LF+ FL+ A+  PLI  QL+ P TLFP+  I LK  Y    GDYLMA+ 
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PPF VGL+WLEL  QWP+ LLNLYA   SK W +TTCLIYGVS+ S+M+A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           AS  LLTIY+PFL +GVLAMLRGL+P  +KA  T  G  PS   KK+A
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAIT--GTRPSNGRKKRA 166

[Close]

BLAST of CsGy4G004960 vs. TrEMBL
Match: tr|M5WRG5|M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G218400 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.0e-43
Identity = 97/168 (57.74%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA++KL D+ LFVFF V ALA PLI AQ  LPQ+LFPN+ + LK+ Y    GDYL+   
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I  +KSW +TTCLIYGVS+F++M  I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKKA 169
           AS  LL +YFPFL +GVLA+LRGLLP  +  T++G G  P++  KKKA
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKKA 167

[Close]

BLAST of CsGy4G004960 vs. TrEMBL
Match: tr|A0A2I4FME0|A0A2I4FME0_9ROSI (transmembrane protein 97-like OS=Juglans regia OX=51240 GN=LOC109000401 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42
Identity = 98/167 (58.68%), Postives = 119/167 (71.26%), Query Frame = 0


Query: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60
           MGA L L D+VLF+FF+V A+A PLI AQ+ LP  L P++ + L N Y    GDYL+A+ 
Sbjct: 1   MGAFLNLVDAVLFLFFVVIAVAAPLIDAQMCLPAGLLPDLLVDLNNWYTREYGDYLVAEK 60

Query: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFVG++WLELL QWPL LLNLY I   K W +TTCLIYGVS F+ MAAI +EL+GSQ+
Sbjct: 61  PHFFVGIVWLELLFQWPLALLNLYGILGGKPWFNTTCLIYGVSCFTCMAAILSELMGSQK 120

Query: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 168
           AS  LL  YFPF+ +GVLA LRGLLP   K TTT  G  P +  KK+
Sbjct: 121 ASDKLLMTYFPFMGLGVLAFLRGLLPHSGKTTTT-IGKRPLLGRKKR 166

The following BLAST results are available for this feature:

BLAST of CsGy4G004960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149168.1	1.4e-85	100.00	PREDICTED: transmembrane protein 97 [Cucumis sativus] >KGN53261.1 hypothetical p...	[more]
XP_008453730.1	2.3e-75	88.69	PREDICTED: transmembrane protein 97-like [Cucumis melo]	[more]
XP_022929300.1	2.6e-63	76.65	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
XP_023553153.1	9.8e-63	77.25	sigma intracellular receptor 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985078.1	4.9e-62	75.45	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]

BLAST of CsGy4G004960 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32380.1	4.3e-36	48.50	Transmembrane protein 97, predicted	[more]
AT1G05210.1	1.2e-35	48.50	Transmembrane protein 97, predicted	[more]
AT1G05220.1	2.3e-29	44.44	Transmembrane protein 97, predicted	[more]

BLAST of CsGy4G004960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6DFQ5\|SGMR2_XENTR	3.4e-06	25.97	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]

BLAST of CsGy4G004960 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZE5\|A0A0A0KZE5_CUCSA	9.3e-86	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G038780 PE=4 SV=1	[more]
tr\|A0A1S3BWY8\|A0A1S3BWY8_CUCME	1.5e-75	88.69	transmembrane protein 97-like OS=Cucumis melo OX=3656 GN=LOC103494373 PE=4 SV=1	[more]
tr\|A0A0A0K5K2\|A0A0A0K5K2_CUCSA	6.8e-44	58.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1	[more]
tr\|M5WRG5\|M5WRG5_PRUPE	2.0e-43	57.74	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G218400 PE=4 SV=1	[more]
tr\|A0A2I4FME0\|A0A2I4FME0_9ROSI	1.7e-42	58.68	transmembrane protein 97-like OS=Juglans regia OX=51240 GN=LOC109000401 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033118	EXPERA
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004960.1	CsGy4G004960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..157 e-value: 5.1E-26 score: 89.2
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 e-value: 8.8E-25 score: 87.7
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 4..152
None	No IPR available	PANTHER	PTHR31204:SF1	TRANSMEMBRANE PROTEIN 97	coord: 4..152
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 15.148

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G004960	Cla014531	Watermelon (97103) v1	cgybwmB288
CsGy4G004960	Csa4G038780	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G004960	MELO3C017552	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G004960	ClCG07G009050	Watermelon (Charleston Gray)	cgybwcgB303
CsGy4G004960	CSPI04G05040	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G004960	Lsi07G002130	Bottle gourd (USVL1VR-Ls)	cgyblsiB277
CsGy4G004960	MELO3C017552.2	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G004960	CsaV3_4G005160	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G004960	BhiUN281G18	Wax gourd	cgybwgoB350

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G004960	Wax gourd	cgybwgoB361
CsGy4G004960	Cucurbita maxima (Rimu)	cgybcmaB498
CsGy4G004960	Cucurbita maxima (Rimu)	cgybcmaB547
CsGy4G004960	Cucurbita moschata (Rifu)	cgybcmoB467
CsGy4G004960	Cucurbita moschata (Rifu)	cgybcmoB521
CsGy4G004960	Cucurbita pepo (Zucchini)	cgybcpeB487
CsGy4G004960	Cucurbita pepo (Zucchini)	cgybcpeB502
CsGy4G004960	Cucurbita pepo (Zucchini)	cgybcpeB531
CsGy4G004960	Silver-seed gourd	carcgybB0931
CsGy4G004960	Silver-seed gourd	carcgybB1005
CsGy4G004960	Watermelon (97103) v2	cgybwmbB254
CsGy4G004960	Watermelon (97103) v2	cgybwmbB305