ClCG07G009050 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG07G009050
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Transmembrane protein
Location	CG_Chr07 : 23974675 .. 23975527 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAAAGTGAAACAATGGGGGCTCTTCTCAAGCTCTTCGATTCAATTCTATTGGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCTCAATTATTACTCCCTCGAGCCCTATTTCCCGATCTTCTCATTGATTTCAAAAACCACTACATTACGCAATCCGGAGATTATCTGATGGCCGAGGCTCCTCACTTTTTCATCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGCTTCTCAACCTCTACGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGTATTTTACTTCTCTGCTCAGATCATCTCATTGTTGTTCAAACCTTCACTTCTTCTCTTCTTTTTCATTGATTTTCTAATTCTACTTTGAAGATGGAAGTAAGCTTTACTTTGTTTCATATACTTCCCTTTTTTTTTCCAGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATGTATCTCCCTTTCTTGGGTTTGGGAGTTTTCGCCACGCTACGTGGGCTGCTGCCACGCTGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGGACCATCAATTGCCACCAAAAAGAAGGCTTGAAGAAAAGAAATGACATCTCATGCTACCAATTTCTCTAATCACACCTCTATTTCATTTTATTCTTCAAGTAAAGTACTCTATTTCATTTTACTTGAATTCATTCATTTTAGTGTTTGTATTTCGAAACATGATTAGAAATACATGATTAGATATGTATTTCGAAACATGATTGATATGTTGCTTCTTTT

mRNA sequence

CTGAAAGTGAAACAATGGGGGCTCTTCTCAAGCTCTTCGATTCAATTCTATTGGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCTCAATTATTACTCCCTCGAGCCCTATTTCCCGATCTTCTCATTGATTTCAAAAACCACTACATTACGCAATCCGGAGATTATCTGATGGCCGAGGCTCCTCACTTTTTCATCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGCTTCTCAACCTCTACGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATGTATCTCCCTTTCTTGGGTTTGGGAGTTTTCGCCACGCTACGTGGGCTGCTGCCACGCTGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGGACCATCAATTGCCACCAAAAAGAAGGCTTGAAGAAAAGAAATGACATCTCATGCTACCAATTTCTCTAATCACACCTCTATTTCATTTTATTCTTCAAGTAAAGTACTCTATTTCATTTTACTTGAATTCATTCATTTTAGTGTTTGTATTTCGAAACATGATTAGAAATACATGATTAGATATGTATTTCGAAACATGATTGATATGTTGCTTCTTTT

Coding sequence (CDS)

ATGGGGGCTCTTCTCAAGCTCTTCGATTCAATTCTATTGGTGTCCTTCCTTGTACATGCCTTGGCGCCTCCTCTCATCGGCGCTCAATTATTACTCCCTCGAGCCCTATTTCCCGATCTTCTCATTGATTTCAAAAACCACTACATTACGCAATCCGGAGATTATCTGATGGCCGAGGCTCCTCACTTTTTCATCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGCTTCTCAACCTCTACGCCATCTCCACTGCAAAATCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTCTTCTCTGCTATGGCTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGCATACTGTTGAAAATGTATCTCCCTTTCTTGGGTTTGGGAGTTTTCGCCACGCTACGTGGGCTGCTGCCACGCTGCTGCAGCAAGGCTACGGCCACCGGCCACGGTGCTGGACCATCAATTGCCACCAAAAAGAAGGCTTGA

Protein sequence

MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEAPHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQRASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA

Homology

[Close]

BLAST of ClCG07G009050 vs. TrEMBL
Match: A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.1e-71
Identity = 139/169 (82.25%), Postives = 150/169 (88.76%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGA+LKLFDS+L V FLVHALAPPLI AQLLLP+ LFP++ I  KN YIT SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           ASGILL +Y PFL +GV A LRGLLPR C+KAT TGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPR-CNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of ClCG07G009050 vs. TrEMBL
Match: M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.6e-47
Identity = 98/169 (57.99%), Postives = 124/169 (73.37%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGAL+KL D+ L V F V ALA PLI AQ  LP++LFP++L+  K+ Y  Q GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHFF+G++WLELL QWPL++ NLY I  AKSW +TTCLIYGVS+F++M  I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL MY PFLGLGV A LRGLLP   S  T++G G  P++  KKKA
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP--SSTTSSGIGKRPTLGRKKKA 167

[Close]

BLAST of ClCG07G009050 vs. TrEMBL
Match: A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-46
Identity = 98/169 (57.99%), Postives = 118/169 (69.82%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGA LKL D +L + FL+ A+  PLI  QL+ P  LFPD LID K  Y  Q GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F +GL+WLEL  QWP+ LLNLYA   +K W +TTCLIYGVS+ S+M+A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL +Y PFLGLGV A LRGL+P C SKA  T  G  PS   KK+A
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVP-CSSKAAIT--GTRPSNGRKKRA 166

[Close]

BLAST of ClCG07G009050 vs. TrEMBL
Match: A0A0S3SBU8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G149700 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 93/169 (55.03%), Postives = 120/169 (71.01%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MG +LKL D+IL + FLV A+A PLI AQ  LP + FP++L+  K+HY    GDYL+AE 
Sbjct: 1   MGVVLKLVDAILFLFFLVIAVAAPLIDAQTCLPLSYFPEILVQLKDHYTHDYGDYLVAEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHFF+GL+WLELL QWPL LLNLYAI T+K W +TTCL+YGVS  ++M AI +E++ S R
Sbjct: 61  PHFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLMYGVSTSTSMVAILSEMMNSNR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL +Y  F+GLG  A LRGLL   CS  + +  G  P++  KK+A
Sbjct: 121 ASDKLLTLYASFMGLGALALLRGLL--TCSSKSTSALGKRPALMRKKRA 167

[Close]

BLAST of ClCG07G009050 vs. TrEMBL
Match: A0A0L9V5M3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g118700 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.7e-44
Identity = 93/169 (55.03%), Postives = 120/169 (71.01%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MG +LKL D+IL + FLV A+A PLI AQ  LP + FP++L+  K+HY    GDYL+AE 
Sbjct: 1   MGVVLKLVDAILFLFFLVIAVAAPLIDAQTCLPLSYFPEILVQLKDHYTHDYGDYLVAEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHFF+GL+WLELL QWPL LLNLYAI T+K W +TTCL+YGVS  ++M AI +E++ S R
Sbjct: 61  PHFFVGLVWLELLFQWPLALLNLYAILTSKPWFNTTCLMYGVSTSTSMVAILSEMMNSNR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL +Y  F+GLG  A LRGLL   CS  + +  G  P++  KK+A
Sbjct: 121 ASDKLLTLYASFMGLGALALLRGLL--TCSSKSTSALGKRPALMRKKRA 167

[Close]

BLAST of ClCG07G009050 vs. TAIR10
Match: AT1G05210.1 (AT1G05210.1 Transmembrane protein 97, predicted)

HSP 1 Score: 161.8 bits (408), Expect = 3.8e-40
Identity = 79/156 (50.64%), Postives = 100/156 (64.10%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGAL KL D  L V F+  A+  PLI  Q  LP  ++P  L D K+ YI   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHF +GL+W ELL  WPL++ N+YAI   KSW  TTCL+YG SL ++MAAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATG 157
           AS  LL MY+PF+G G+ A LRGL+ R      ++G
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGSSG 156

[Close]

BLAST of ClCG07G009050 vs. TAIR10
Match: AT2G32380.1 (AT2G32380.1 Transmembrane protein 97, predicted)

HSP 1 Score: 161.0 bits (406), Expect = 6.4e-40
Identity = 79/168 (47.02%), Postives = 109/168 (64.88%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGA  KL D++L + F + A+  PLI  Q  LP  +FP  ++D    YI + GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHF +GL+W ELLL WPL+++N+YAI   KSW  TT ++YG S+ ++MAAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKK 169
           AS  LL MY+PF+G+G+ A LRGLL +  S  +    G  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQ--SNKSGGAVGKRPAILARRK 166

[Close]

BLAST of ClCG07G009050 vs. TAIR10
Match: AT1G05220.1 (AT1G05220.1 Transmembrane protein 97, predicted)

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-32
Identity = 68/153 (44.44%), Postives = 98/153 (64.05%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGAL KL +  L   F + A+  PL+  Q+L P  ++P LL D K+ Y ++  DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GL+W E++   PL+++N+YAI T+KSW  TT L+YG S  ++MAAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKAT 154
            +  LL  YLPF+GL + A LRGL+     ++T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTKRST 152

[Close]

BLAST of ClCG07G009050 vs. NCBI nr
Match: gi|659107545|ref|XP_008453730.1| (PREDICTED: transmembrane protein 97-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-73
Identity = 146/169 (86.39%), Postives = 152/169 (89.94%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MG+ LKLF+S+L V FLVHALAPPLIGAQLLLP+ LFPD+LI FKN YIT SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           ASGILL +Y PFL LGVFA LRGLLP  C KAT TGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPH-CRKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of ClCG07G009050 vs. NCBI nr
Match: gi|449462890|ref|XP_004149168.1| (PREDICTED: transmembrane protein 97 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 3.0e-71
Identity = 139/169 (82.25%), Postives = 150/169 (88.76%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGA+LKLFDS+L V FLVHALAPPLI AQLLLP+ LFP++ I  KN YIT SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P FF+GLLWLELLLQWPLTLLNLYAI T+KSWLHTTCLIYGVSLFSAMAAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           ASGILL +Y PFL +GV A LRGLLPR C+KAT TGHGAGPSIATKKKA
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPR-CNKATTTGHGAGPSIATKKKA 168

[Close]

BLAST of ClCG07G009050 vs. NCBI nr
Match: gi|595927259|ref|XP_007215075.1| (hypothetical protein PRUPE_ppa012485mg [Prunus persica])

HSP 1 Score: 196.1 bits (497), Expect = 5.1e-47
Identity = 98/169 (57.99%), Postives = 124/169 (73.37%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGAL+KL D+ L V F V ALA PLI AQ  LP++LFP++L+  K+ Y  Q GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHFF+G++WLELL QWPL++ NLY I  AKSW +TTCLIYGVS+F++M  I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL MY PFLGLGV A LRGLLP   S  T++G G  P++  KKKA
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP--SSTTSSGIGKRPTLGRKKKA 167

[Close]

BLAST of ClCG07G009050 vs. NCBI nr
Match: gi|645247952|ref|XP_008230078.1| (PREDICTED: uncharacterized protein LOC103329393 [Prunus mume])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 98/169 (57.99%), Postives = 125/169 (73.96%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGAL+KL D+ L V F+V ALA PLI AQ  LP++LFP +L++ K+ Y  Q GDYL+A+ 
Sbjct: 1   MGALVKLVDATLFVFFVVIALAAPLIDAQTCLPQSLFPSVLVELKSWYARQYGDYLVAQK 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           PHFF+G++WLELL QWPL++ NLY I  AKSW +TTCLIYGVS+F++M  I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVIILSELVQSGK 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL MY PFLGLGV A LRGLLP   S  T++  G  P++  KKKA
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP--SSTTSSRIGKRPTLGRKKKA 167

[Close]

BLAST of ClCG07G009050 vs. NCBI nr
Match: gi|449453494|ref|XP_004144492.1| (PREDICTED: transmembrane protein 97-like [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 7.4e-46
Identity = 98/169 (57.99%), Postives = 118/169 (69.82%), Query Frame = 1


Query: 1   MGALLKLFDSILLVSFLVHALAPPLIGAQLLLPRALFPDLLIDFKNHYITQSGDYLMAEA 60
           MGA LKL D +L + FL+ A+  PLI  QL+ P  LFPD LID K  Y  Q GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120
           P F +GL+WLEL  QWP+ LLNLYA   +K W +TTCLIYGVS+ S+M+A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGILLKMYLPFLGLGVFATLRGLLPRCCSKATATGHGAGPSIATKKKA 170
           AS  LL +Y PFLGLGV A LRGL+P C SKA  T  G  PS   KK+A
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVP-CSSKAAIT--GTRPSNGRKKRA 166

The following BLAST results are available for this feature:

BLAST of ClCG07G009050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZE5_CUCSA	2.1e-71	82.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1	[more]
M5WRG5_PRUPE	3.6e-47	57.99	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1	[more]
A0A0A0K5K2_CUCSA	5.1e-46	57.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1	[more]
A0A0S3SBU8_PHAAN	1.7e-44	55.03	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G149700 PE=...	[more]
A0A0L9V5M3_PHAAN	1.7e-44	55.03	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g118700 PE=4 SV=1	[more]

BLAST of ClCG07G009050 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05210.1	3.8e-40	50.64	Transmembrane protein 97, predicted	[more]
AT2G32380.1	6.4e-40	47.02	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.7e-32	44.44	Transmembrane protein 97, predicted	[more]

BLAST of ClCG07G009050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107545\|ref\|XP_008453730.1\|	1.1e-73	86.39	PREDICTED: transmembrane protein 97-like [Cucumis melo]	[more]
gi\|449462890\|ref\|XP_004149168.1\|	3.0e-71	82.25	PREDICTED: transmembrane protein 97 [Cucumis sativus]	[more]
gi\|595927259\|ref\|XP_007215075.1\|	5.1e-47	57.99	hypothetical protein PRUPE_ppa012485mg [Prunus persica]	[more]
gi\|645247952\|ref\|XP_008230078.1\|	1.1e-46	57.99	PREDICTED: uncharacterized protein LOC103329393 [Prunus mume]	[more]
gi\|449453494\|ref\|XP_004144492.1\|	7.4e-46	57.99	PREDICTED: transmembrane protein 97-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G009050.1	ClCG07G009050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Transmembrane protein 97	PIR	PIRSF031032	TMP_97	coord: 1..156 score: 1.4
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 1..169 score: 1.8
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG07G009050	Csa4G038780	Cucumber (Chinese Long) v2	cuwcgB325
ClCG07G009050	MELO3C017552	Melon (DHL92) v3.5.1	mewcgB484
ClCG07G009050	Cla014531	Watermelon (97103) v1	wcgwmB364
ClCG07G009050	Cla97C00G000060	Watermelon (97103) v2	wcgwmbB297
ClCG07G009050	CSPI04G05040	Wild cucumber (PI 183967)	cpiwcgB342
ClCG07G009050	Cucsa.201310	Cucumber (Gy14) v1	cgywcgB372
ClCG07G009050	CmaCh16G006540	Cucurbita maxima (Rimu)	cmawcgB301
ClCG07G009050	CmoCh16G007110	Cucurbita moschata (Rifu)	cmowcgB294
ClCG07G009050	Lsi07G002130	Bottle gourd (USVL1VR-Ls)	lsiwcgB413
ClCG07G009050	Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpewcgB210
ClCG07G009050	CsGy4G004960	Cucumber (Gy14) v2	cgybwcgB303
ClCG07G009050	MELO3C017552.2	Melon (DHL92) v3.6.1	medwcgB479
ClCG07G009050	Carg05772	Silver-seed gourd	carwcgB0999
ClCG07G009050	CsaV3_4G005160	Cucumber (Chinese Long) v3	cucwcgB344

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG07G009050	Silver-seed gourd	carwcgB0916
ClCG07G009050	Watermelon (97103) v2	wcgwmbB307
ClCG07G009050	Wax gourd	wcgwgoB560
ClCG07G009050	Cucurbita maxima (Rimu)	cmawcgB668
ClCG07G009050	Cucurbita moschata (Rifu)	cmowcgB670
ClCG07G009050	Melon (DHL92) v3.5.1	mewcgB125
ClCG07G009050	Cucurbita pepo (Zucchini)	cpewcgB412