CmoCh16G007110 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G007110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr16 : 3548455 .. 3549925 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTTCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTATTCTACTTTTCTCCTACCATCATGTGATTGTTGTTCAATGCTTTACTCTGATTTTCTGTCCTTCTCCAACTTTCTCTTTTGAACTTTTCCTAATTTAAAAAAAAAAAAAAAGTTTTTAAAACGCTTTCGACGTGGGATCTCACAATCCACTCATTTTGAGGTCAACGTCCTCACTAACACTCGTTCTCTTCGGGACCCAACGTCCTATTCTGGTGTGCACCCTGACACTTATTTCTTTCTCTAATCAATGTGGAACTCTAATCCACTCCCTTTTCAGCGTCCTTGTTGGTACACCATCTCGTATCCACCTCTTTCAGAGCTCAACCTTCTCGCTGGCACATCGTCTGGTGTTTGGCTTTGATACCATTTGCAACGGCTCAAACCCACCACTAATAGATTTTATCTTCTTTGGATTTTTCCTTTCGGATTTTCTCTCAGGTTTTAAAAATGTATTTACTAAGAGAGATTTTCACGCTCTTATAATAGATATTTTGTTTTCCTCTCAGACCGATAGGTTATTTGAAGATGGAAGTAAATGAATAAAGCTTATATTAGGTTCTTTTTTCAGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGGAAAAAGAAGGTTTGAAGCAAAGATATGGCATCTCGTGTCGCCATTTTGTTCTTTCAACTATCTGCGTATATTTTCGAAAGATTTAAGCGACCACGAATAAAATTGAACAAGTGATTGTTGGATGATAAAAGTCCTACATCAACTAATTTAGAGAATAATCATAAGTATAATAATCAAGGAATACTCTATTAGCATGTGGCCTTTTAAGAAGCTCAAAGCCAAGCCATGAGAGCTTAAACTCAAAGTGGATAATATCATACCATTATAGTGAGTCGTGTTCATCTAACAAAAAAACAGGGCTATAAATTGGGTGGTCGAGTCGGTTTTGGGCCATAAGTTCAATCTATGTGAGGAATATAGTCTCACATGATGATGTAATAGTCCAAATCCACCACTAAGC

mRNA sequence

GTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTTCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGGAAAAAGAAGGTTTGAAGCAAAGATATGGCATCTCGTGTCGCCATTTTGTTCTTTCAACTATCTGCGTATATTTTCGAAAGATTTAAGCGACCACGAATAAAATTGAACAAGTGATTGTTGGATGATAAAAGTCCTACATCAACTAATTTAGAGAATAATCATAAGTATAATAATCAAGGAATACTCTATTAGCATGTGGCCTTTTAAGAAGCTCAAAGCCAAGCCATGAGAGCTTAAACTCAAAGTGGATAATATCATACCATTATAGTGAGTCGTGTTCATCTAACAAAAAAACAGGGCTATAAATTGGGTGGTCGAGTCGGTTTTGGGCCATAAGTTCAATCTATGTGAGGAATATAGTCTCACATGATGATGTAATAGTCCAAATCCACCACTAAGC

Coding sequence (CDS)

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTTCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGGAAAAAGAAGGTTTGA

Homology

[Close]

BLAST of CmoCh16G007110 vs. TrEMBL
Match: A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.1e-64
Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 167

[Close]

BLAST of CmoCh16G007110 vs. TrEMBL
Match: M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 100/167 (59.88%), Postives = 122/167 (73.05%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L+KL D+ LFVF FV A+A PLI AQ  LP +LFP+VLV  K  Y R  GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I AAKSW +TTCLIYGVS+F++MV I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           AS  LL +Y PFLGLGVLA LRGLLP  S  T +G    P++  KKK
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKK 166

[Close]

BLAST of CmoCh16G007110 vs. TrEMBL
Match: A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-41
Identity = 95/167 (56.89%), Postives = 115/167 (68.86%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG  LKL D +LF+   + A+  PLI  QL+ P  LFPD L+D K  Y R  GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           PPF VGL+WLEL  QWP+ + NLYA  A+K W +TTCLIYGVS+ S+M A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           AS  LL +Y PFLGLGVLA LRGL+P  SKA  TG    PS   KK+
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITG--TRPSNGRKKR 165

[Close]

BLAST of CmoCh16G007110 vs. TrEMBL
Match: A0A067JPF0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22871 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.2e-40
Identity = 89/168 (52.98%), Postives = 119/168 (70.83%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG + KL D +LF+F  V A+A PLI AQ  LP + FP++L++ K+ Y    GDYL++E 
Sbjct: 1   MGAITKLIDIILFLFFLVIAVAAPLIDAQTCLPLSYFPELLINLKQWYGHEYGDYLLSEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVG++WLELL QWPL +FNLYAI A+K W +TTCLIYG S+F++M AI AEL+GS +
Sbjct: 61  PHFFVGIVWLELLFQWPLALFNLYAILASKPWFNTTCLIYGASVFTSMSAILAELMGSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV 169
           AS  L+ +Y PF+GLG+LA LRGL+P   K+        P +  KK+V
Sbjct: 121 ASDKLMMIYFPFMGLGILAILRGLMPVSGKSASAMGSKRPPLLKKKRV 168

[Close]

BLAST of CmoCh16G007110 vs. TrEMBL
Match: B9SDV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.7e-39
Identity = 87/160 (54.37%), Postives = 115/160 (71.88%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG + KL D++LF+F  V A+A PLI AQ  LP  LFPD+L+D K+ Y    GDYL++E 
Sbjct: 1   MGAITKLIDAILFLFFVVIAVAAPLIDAQTCLPLNLFPDMLIDLKKWYSNEYGDYLVSEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVG++W+ELL QWPL +FNLY I A+K W +TTCLIYG S+F++M AI AEL+GS +
Sbjct: 61  PHFFVGVVWIELLFQWPLALFNLYGILASKPWFNTTCLIYGASVFTSMGAIMAELMGSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGP 161
           A+  L+ +Y PF+GLG+LA LRGL+P  S +   G    P
Sbjct: 121 ATERLMMVYAPFMGLGILAILRGLMPNSSASIVLGKRATP 160

[Close]

BLAST of CmoCh16G007110 vs. TAIR10
Match: AT2G32380.1 (AT2G32380.1 Transmembrane protein 97, predicted)

HSP 1 Score: 149.1 bits (375), Expect = 2.5e-36
Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG   KL D+VLF++  + A+  PLI  Q  LPG +FP  +VD    Y+   GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P F VGL+W ELLL WPL++ N+YAI A KSW  TT ++YG S+ ++M AI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVG--PSIAGKKK 168
           AS  LL +Y+PF+G+G+LA LRGLL   S++  +G  VG  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLL---SQSNKSGGAVGKRPAILARRK 166

[Close]

BLAST of CmoCh16G007110 vs. TAIR10
Match: AT1G05210.1 (AT1G05210.1 Transmembrane protein 97, predicted)

HSP 1 Score: 147.1 bits (370), Expect = 9.5e-36
Identity = 78/152 (51.32%), Postives = 100/152 (65.79%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L KL D  LFV+    A+  PLI  Q  LP  ++P  L D K  Y+   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P F VGL+W ELL  WPL++ N+YAI A KSW  TTCL+YG SL ++M AI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKAT 153
           AS  LL +Y+PF+G G+LA LRGL+ R +K T
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNT 152

[Close]

BLAST of CmoCh16G007110 vs. TAIR10
Match: AT1G05220.1 (AT1G05220.1 Transmembrane protein 97, predicted)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 68/150 (45.33%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L KL +  LF F  + A+  PL+  Q+L PG ++P +L D K+ Y     DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFPG-IYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+YG S  ++M AI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSK 151
            +  LL  YLPF+GL +LA LRGL+   +K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

[Close]

BLAST of CmoCh16G007110 vs. NCBI nr
Match: gi|659107545|ref|XP_008453730.1| (PREDICTED: transmembrane protein 97-like [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.7e-64
Identity = 131/167 (78.44%), Postives = 140/167 (83.83%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG  LKLF+SVLFVF  VHA+APPLIGAQLLLP  LFPD+L+ FK  Y+  SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           ASG+LL +Y PFL LGV A LRGLLP C KAT TGH  GPSIA KKK
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKK 167

[Close]

BLAST of CmoCh16G007110 vs. NCBI nr
Match: gi|449462890|ref|XP_004149168.1| (PREDICTED: transmembrane protein 97 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 1.0e-63
Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG +LKLFDSVLFVF  VHA+APPLI AQLLLP  LFP++ +  K  Y+  SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYGVSLFSAM AIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           ASG+LL +Y PFL +GVLA LRGLLPRC+KAT TGH  GPSIA KKK
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 167

[Close]

BLAST of CmoCh16G007110 vs. NCBI nr
Match: gi|595927259|ref|XP_007215075.1| (hypothetical protein PRUPE_ppa012485mg [Prunus persica])

HSP 1 Score: 184.1 bits (466), Expect = 2.0e-43
Identity = 100/167 (59.88%), Postives = 122/167 (73.05%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L+KL D+ LFVF FV A+A PLI AQ  LP +LFP+VLV  K  Y R  GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I AAKSW +TTCLIYGVS+F++MV I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           AS  LL +Y PFLGLGVLA LRGLLP  S  T +G    P++  KKK
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKK 166

[Close]

BLAST of CmoCh16G007110 vs. NCBI nr
Match: gi|645247952|ref|XP_008230078.1| (PREDICTED: uncharacterized protein LOC103329393 [Prunus mume])

HSP 1 Score: 179.9 bits (455), Expect = 3.8e-42
Identity = 99/167 (59.28%), Postives = 121/167 (72.46%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L+KL D+ LFVF  V A+A PLI AQ  LP +LFP VLV+ K  Y R  GDYL+A+ 
Sbjct: 1   MGALVKLVDATLFVFFVVIALAAPLIDAQTCLPQSLFPSVLVELKSWYARQYGDYLVAQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I AAKSW +TTCLIYGVS+F++MV I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVIILSELVQSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           AS  LL +Y PFLGLGVLA LRGLLP  S  T +     P++  KKK
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSRIGKRPTLGRKKK 166

[Close]

BLAST of CmoCh16G007110 vs. NCBI nr
Match: gi|658013398|ref|XP_008341994.1| (PREDICTED: uncharacterized protein LOC103404806 [Malus domestica])

HSP 1 Score: 176.8 bits (447), Expect = 3.2e-41
Identity = 96/167 (57.49%), Postives = 117/167 (70.06%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVFLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEA 60
           MG L KL D+ LFVF  V A+A PLI AQ+ LP ++FPD L D K  Y R  GDYLM + 
Sbjct: 1   MGALAKLVDATLFVFFVVIAVAAPLIDAQICLPESJFPDALTDLKNWYARSYGDYLMTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFSAMVAIAAELIGSQR 120
           P F VG++WLELL QWPL + NLY I AAKSW HTTCLIYGVS+ ++MV I +EL+ S +
Sbjct: 61  PYFVVGIIWLELLFQWPLALANLYGILAAKSWFHTTCLIYGVSVLTSMVTILSELLQSGK 120

Query: 121 ASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKK 168
           AS  LL +Y PFLGLG+LAT+RGLLP  S  T +     P++  KKK
Sbjct: 121 ASXDLLYMYFPFLGLGILATVRGLLPP-SNTTTSRIGKRPTLGRKKK 166

The following BLAST results are available for this feature:

BLAST of CmoCh16G007110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh16G007110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZE5_CUCSA	7.1e-64	76.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1	[more]
M5WRG5_PRUPE	1.4e-43	59.88	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1	[more]
A0A0A0K5K2_CUCSA	2.9e-41	56.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1	[more]
A0A067JPF0_JATCU	3.2e-40	52.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22871 PE=4 SV=1	[more]
B9SDV6_RICCO	2.7e-39	54.38	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1	[more]

BLAST of CmoCh16G007110 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32380.1	2.5e-36	48.52	Transmembrane protein 97, predicted	[more]
AT1G05210.1	9.5e-36	51.32	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.1e-28	45.33	Transmembrane protein 97, predicted	[more]

BLAST of CmoCh16G007110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107545\|ref\|XP_008453730.1\|	2.7e-64	78.44	PREDICTED: transmembrane protein 97-like [Cucumis melo]	[more]
gi\|449462890\|ref\|XP_004149168.1\|	1.0e-63	76.65	PREDICTED: transmembrane protein 97 [Cucumis sativus]	[more]
gi\|595927259\|ref\|XP_007215075.1\|	2.0e-43	59.88	hypothetical protein PRUPE_ppa012485mg [Prunus persica]	[more]
gi\|645247952\|ref\|XP_008230078.1\|	3.8e-42	59.28	PREDICTED: uncharacterized protein LOC103329393 [Prunus mume]	[more]
gi\|658013398\|ref\|XP_008341994.1\|	3.2e-41	57.49	PREDICTED: uncharacterized protein LOC103404806 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G007110.1	CmoCh16G007110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Transmembrane protein 97	PIR	PIRSF031032	TMP_97	coord: 1..155 score: 2.4
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 1..167 score: 9.7
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G007110	Cucsa.201310	Cucumber (Gy14) v1	cgycmoB0595
CmoCh16G007110	CmaCh16G006540	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G007110	Cla014531	Watermelon (97103) v1	cmowmB301
CmoCh16G007110	Csa4G038780	Cucumber (Chinese Long) v2	cmocuB325
CmoCh16G007110	MELO3C017552	Melon (DHL92) v3.5.1	cmomeB294
CmoCh16G007110	ClCG07G009050	Watermelon (Charleston Gray)	cmowcgB294
CmoCh16G007110	CSPI04G05040	Wild cucumber (PI 183967)	cmocpiB332
CmoCh16G007110	Lsi07G002130	Bottle gourd (USVL1VR-Ls)	cmolsiB315
CmoCh16G007110	Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G007110	MELO3C017552.2	Melon (DHL92) v3.6.1	cmomedB336
CmoCh16G007110	CsaV3_4G005160	Cucumber (Chinese Long) v3	cmocucB0388
CmoCh16G007110	Cla97C00G000060	Watermelon (97103) v2	cmowmbB325
CmoCh16G007110	Carg05772	Silver-seed gourd	carcmoB1366

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G007110	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh16G007110	Cucurbita maxima (Rimu)	cmacmoB700
CmoCh16G007110	Watermelon (97103) v1	cmowmB318
CmoCh16G007110	Cucurbita pepo (Zucchini)	cmocpeB312
CmoCh16G007110	Cucurbita pepo (Zucchini)	cmocpeB316
CmoCh16G007110	Cucumber (Gy14) v2	cgybcmoB467
CmoCh16G007110	Silver-seed gourd	carcmoB1258
CmoCh16G007110	Watermelon (97103) v2	cmowmbB314
CmoCh16G007110	Watermelon (97103) v2	cmowmbB336
CmoCh16G007110	Wax gourd	cmowgoB0428