Cp4.1LG14g01610 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG14g01610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane protein 97, predicted
Location	Cp4.1LG14 : 3541055 .. 3542842 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCTCTGCTATGGTATTCTACTTTTCTCCTAAGATCATCTGATTGGTAGATCCTCGTTGGCTTTCCCTTTCGAGTTTTCTCTCAAAGTTTTTAAAACATGACGGTTAAGGAGAGGTTTCCACACCCTTATACTACACCCTTATAAAGAAATATTTCGTTCTCCTCTTTGATCGACGTGAGATCTCACAATCCACCCCTTTTATGACCCAGCGTCCTTGCTACCATACCTCCCTGTGTCTCGCTCTAATATCATTTATAATTGCTCAAGCTTTCACTTTCGTGCTTCCCCTCAAAAATTTTAAAACGTGTTTGGTAGGAAGAGTTTTCCACACCCTTATAAAAAAAAATGATTAATGTTCTTCTTCAATTGATGTGAGATCTCACAATTCATTGGCTCTTATACCCTTTGTAATTTCTTCAATTGATGTGAGATCTCACAATTCATTGGCTCTTATACCCTTTGTAATTATCTAAACCCACCGCTACCAGATATTATTCTCTTTGGATTTTTTCTCTCTTATACCCTTTGTAATTATCTAAGCCCACCGCTACCAGATATTATTCTCTTTGGATTTTTTCTCTAAAACACGTATGCTTAGATGTTTCTCCGATCAATGTGAGATCTCACAATCCACCCTGTTCGAGGCCTAGCGTCTTCGCTAGTACACGTCCAGTGTCTGACTCTAATACCATTTGTAATTACCCAAACACTTAGTTCTTTCTCCAATCAATGTGAGATCTCACAATCCACCCCGTTCGAAGCCTAGCGTCTTCGCTAGTACACCACTCAGTGTCGGCTCTAATACCATTTGTAATTACCCAAACCAATCGTTGGCTAATATTGTCCTCTTTGGGCCTTCAGTTTTTAAAACACATTTGATTGGGGGAGGTTTGCATATCTTTATAAAAAAATGTTTAGTTGTCCTCTTCCATTGATATAAGATCTCACATTGATTGGAGAGAGAAACGAGTGCCAGCAAAAACGCTAGGCCCAGAAGGCGGTGGATTGTGAGATCCCGTTGGAGTGAGACGAAATATCTAACAAAACCCCGAGCAAAAGCCCAAAAAAAAAAAAAAAAAAAAACTCAAAGTTTGACTCTTTGAAAGGAAGTAAATGAATAAGCTTTGTTGGTTGTTTTTTCAGGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACACCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGAAGCAAAGATATGGCATCTCATGTCGCCATTTTGTTCTTCCAAGTAACTGTGTCCCAATAATCTGTTTCTTTTCAGAAGATTTAAGCTTGAAAATTGAAATCAGCCTTTTATTTTTCCCTTTTGTTGGGACTGATTGAATTGAAGACAAT

mRNA sequence

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACACCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGAAGCAAAGATATGGCATCTCATGTCGCCATTTTGTTCTTCCAAGTAACTGTGTCCCAATAATCTGTTTCTTTTCAGAAGATTTAAGCTTGAAAATTGAAATCAGCCTTTTATTTTTCCCTTTTGTTGGGACTGATTGAATTGAAGACAAT

Coding sequence (CDS)

ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCGTTCTTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTATTGATTTCAAGGAGATGTACATTCGGCTGTCGGGAGACTATCTGATGGCGGAGACGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACCGTTTTCAACCTCTACGCCATCTGGGCTGCGAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGCGGCCATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGAGTACTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTGGCCACGCTACGTGGGCTGATGCCGCGCTGCAGCAAGGCTACGGCCACCGGCGACACCGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA

Protein sequence

MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAETPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGAAIAAELIGSQRASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKKV

Homology

[Close]

BLAST of Cp4.1LG14g01610 vs. TrEMBL
Match: A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 4.3e-58
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG +LKLFDSVLFV F VHA+APPLI AQLLLP  LFP++ I  K  YI  SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYG       AAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           ASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Cp4.1LG14g01610 vs. TrEMBL
Match: A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 5.8e-39
Identity = 93/167 (55.69%), Postives = 111/167 (66.47%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG  LKL D +LF+ F + A+  PLI  QL+ P  LFPD LID K  Y R  GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           PPF VGL+WLEL  QWP+ + NLYA  A+K W +TTCLIYG       +A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           AS  LL +Y PFLGLGVLA LRGL+P  SKA  TG    PS   KK+
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITG--TRPSNGRKKR 165

[Close]

BLAST of Cp4.1LG14g01610 vs. TrEMBL
Match: M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-38
Identity = 93/167 (55.69%), Postives = 116/167 (69.46%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L+KL D+ LFV FFV A+A PLI AQ  LP +LFP+VL+  K  Y R  GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGAA-------IAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I AAKSW +TTCLIYG +       I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           AS  LL +Y PFLGLGVLA LRGL+P  S  T++G    P++  KKK
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKK 166

[Close]

BLAST of Cp4.1LG14g01610 vs. TrEMBL
Match: A0A067JPF0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22871 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.4e-38
Identity = 89/168 (52.98%), Postives = 116/168 (69.05%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG + KL D +LF+ F V A+A PLI AQ  LP + FP++LI+ K+ Y    GDYL++E 
Sbjct: 1   MGAITKLIDIILFLFFLVIAVAAPLIDAQTCLPLSYFPELLINLKQWYGHEYGDYLLSEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGA-------AIAAELIGSQR 120
           P FFVG++WLELL QWPL +FNLYAI A+K W +TTCLIYGA       AI AEL+GS +
Sbjct: 61  PHFFVGIVWLELLFQWPLALFNLYAILASKPWFNTTCLIYGASVFTSMSAILAELMGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKKV 162
           AS  L+ +Y PF+GLG+LA LRGLMP   K+ +   +  P +  KK+V
Sbjct: 121 ASDKLMMIYFPFMGLGILAILRGLMPVSGKSASAMGSKRPPLLKKKRV 168

[Close]

BLAST of Cp4.1LG14g01610 vs. TrEMBL
Match: B9SDV6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.2e-37
Identity = 87/160 (54.37%), Postives = 110/160 (68.75%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG + KL D++LF+ F V A+A PLI AQ  LP  LFPD+LID K+ Y    GDYL++E 
Sbjct: 1   MGAITKLIDAILFLFFVVIAVAAPLIDAQTCLPLNLFPDMLIDLKKWYSNEYGDYLVSEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGA-------AIAAELIGSQR 120
           P FFVG++W+ELL QWPL +FNLY I A+K W +TTCLIYGA       AI AEL+GS +
Sbjct: 61  PHFFVGVVWIELLFQWPLALFNLYGILASKPWFNTTCLIYGASVFTSMGAIMAELMGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGP 154
           A+  L+ +Y PF+GLG+LA LRGLMP  S +   G    P
Sbjct: 121 ATERLMMVYAPFMGLGILAILRGLMPNSSASIVLGKRATP 160

[Close]

BLAST of Cp4.1LG14g01610 vs. TAIR10
Match: AT2G32380.1 (AT2G32380.1 Transmembrane protein 97, predicted)

HSP 1 Score: 142.1 bits (357), Expect = 2.9e-34
Identity = 81/169 (47.93%), Postives = 109/169 (64.50%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG   KL D+VLF+ F + A+  PLI  Q  LPG +FP  ++D    YI   GDYL+ E 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           P F VGL+W ELLL WPL++ N+YAI A KSW  TT ++YG       AAI  E+IGS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVG--PSIAGKKK 161
           AS  LL +Y+PF+G+G+LA LRGL+   S++  +G  VG  P+I  ++K
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLL---SQSNKSGGAVGKRPAILARRK 166

[Close]

BLAST of Cp4.1LG14g01610 vs. TAIR10
Match: AT1G05210.1 (AT1G05210.1 Transmembrane protein 97, predicted)

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-33
Identity = 78/154 (50.65%), Postives = 97/154 (62.99%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L KL D  LFV F   A+  PLI  Q  LP  ++P  L D K  YI   GDYL+ E 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           P F VGL+W ELL  WPL++ N+YAI A KSW  TTCL+YG       AAI  ++IGS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATAT 148
           AS  LL +Y+PF+G G+LA LRGL+ R +K T +
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGS 154

[Close]

BLAST of Cp4.1LG14g01610 vs. TAIR10
Match: AT1G05220.1 (AT1G05220.1 Transmembrane protein 97, predicted)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 69/154 (44.81%), Postives = 95/154 (61.69%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L KL +  LF  F + A+  PL+  Q+L PG ++P +L D K+ Y     DYL  E 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFPG-IYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           P FFVGL+W E++   PL++ N+YAI  +KSW  TT L+YG       AAI  ++IGS++
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATAT 148
            +  LL  YLPF+GL +LA LRGL+  CS   +T
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV-TCSTKRST 152

[Close]

BLAST of Cp4.1LG14g01610 vs. NCBI nr
Match: gi|659107545|ref|XP_008453730.1| (PREDICTED: transmembrane protein 97-like [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-58
Identity = 125/167 (74.85%), Postives = 133/167 (79.64%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG  LKLF+SVLFV F VHA+APPLIGAQLLLP  LFPD+LI FK  YI  SGDYLMAE 
Sbjct: 1   MGSALKLFNSVLFVFFLVHALAPPLIGAQLLLPQTLFPDILIHFKNQYITHSGDYLMAEP 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           PPFF+GLLWLELLLQWPLT+ NLYAI  AKSWLHTTCLIYG       AAIAAELIGSQR
Sbjct: 61  PPFFIGLLWLELLLQWPLTLLNLYAISTAKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           ASG+LL +Y PFL LGV A LRGL+P C KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYSPFLVLGVFAMLRGLLPHCRKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Cp4.1LG14g01610 vs. NCBI nr
Match: gi|449462890|ref|XP_004149168.1| (PREDICTED: transmembrane protein 97 [Cucumis sativus])

HSP 1 Score: 232.3 bits (591), Expect = 6.1e-58
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG +LKLFDSVLFV F VHA+APPLI AQLLLP  LFP++ I  K  YI  SGDYLMA+ 
Sbjct: 1   MGAVLKLFDSVLFVFFLVHALAPPLISAQLLLPQTLFPNIFIHLKNKYITHSGDYLMADL 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           PPFFVGLLWLELLLQWPLT+ NLYAI  +KSWLHTTCLIYG       AAIAAELIGSQR
Sbjct: 61  PPFFVGLLWLELLLQWPLTLLNLYAIPTSKSWLHTTCLIYGVSLFSAMAAIAAELIGSQR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           ASG+LL +Y PFL +GVLA LRGL+PRC+KAT TG   GPSIA KKK
Sbjct: 121 ASGILLTIYFPFLAVGVLAMLRGLLPRCNKATTTGHGAGPSIATKKK 167

[Close]

BLAST of Cp4.1LG14g01610 vs. NCBI nr
Match: gi|449453494|ref|XP_004144492.1| (PREDICTED: transmembrane protein 97-like [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 8.3e-39
Identity = 93/167 (55.69%), Postives = 111/167 (66.47%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG  LKL D +LF+ F + A+  PLI  QL+ P  LFPD LID K  Y R  GDYLMAE+
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQR 120
           PPF VGL+WLEL  QWP+ + NLYA  A+K W +TTCLIYG       +A+  E++GS R
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           AS  LL +Y PFLGLGVLA LRGL+P  SKA  TG    PS   KK+
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITG--TRPSNGRKKR 165

[Close]

BLAST of Cp4.1LG14g01610 vs. NCBI nr
Match: gi|595927259|ref|XP_007215075.1| (hypothetical protein PRUPE_ppa012485mg [Prunus persica])

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38
Identity = 93/167 (55.69%), Postives = 116/167 (69.46%), Query Frame = 1


Query: 1   MGVLLKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAET 60
           MG L+KL D+ LFV FFV A+A PLI AQ  LP +LFP+VL+  K  Y R  GDYL+ + 
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGAA-------IAAELIGSQR 120
           P FFVG++WLELL QWPL++ NLY I AAKSW +TTCLIYG +       I +EL+ S +
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASGVLLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           AS  LL +Y PFLGLGVLA LRGL+P  S  T++G    P++  KKK
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPP-SSTTSSGIGKRPTLGRKKK 166

[Close]

BLAST of Cp4.1LG14g01610 vs. NCBI nr
Match: gi|659111037|ref|XP_008455545.1| (PREDICTED: uncharacterized protein LOC103495696, partial [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 5.4e-38
Identity = 90/163 (55.21%), Postives = 110/163 (67.48%), Query Frame = 1


Query: 5   LKLFDSVLFVSFFVHAMAPPLIGAQLLLPGALFPDVLIDFKEMYIRLSGDYLMAETPPFF 64
           LKL D++LF+ F + A+  P I  QL+ P  LFPD LID K  Y+R  GDY+MAE+PPF 
Sbjct: 2   LKLIDALLFLIFLILAIISPPIDFQLIFPQTLFPDFLIDLKASYVRQYGDYIMAESPPFL 61

Query: 65  VGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYG-------AAIAAELIGSQRASGV 124
           VGL+WLEL  QWPL + NLYA  A+K W  TTCLIYG       +A+  E++GS RAS  
Sbjct: 62  VGLVWLELFFQWPLMLLNLYAFLASKPWYKTTCLIYGVSVVTSMSAVLGEMVGSNRASTT 121

Query: 125 LLKLYLPFLGLGVLATLRGLMPRCSKATATGDTVGPSIAGKKK 161
           LL +Y PF+GLGVLA LRGL+P  SKA  TG T  PS   KK+
Sbjct: 122 LLAMYYPFMGLGVLAMLRGLVPCSSKAAITG-TTRPSNGRKKR 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01610 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG14g01610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZE5_CUCSA	4.3e-58	73.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1	[more]
A0A0A0K5K2_CUCSA	5.8e-39	55.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1	[more]
M5WRG5_PRUPE	1.3e-38	55.69	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1	[more]
A0A067JPF0_JATCU	6.4e-38	52.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22871 PE=4 SV=1	[more]
B9SDV6_RICCO	4.2e-37	54.38	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0486820 PE=4 SV=1	[more]

BLAST of Cp4.1LG14g01610 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32380.1	2.9e-34	47.93	Transmembrane protein 97, predicted	[more]
AT1G05210.1	2.5e-33	50.65	Transmembrane protein 97, predicted	[more]
AT1G05220.1	1.7e-26	44.81	Transmembrane protein 97, predicted	[more]

BLAST of Cp4.1LG14g01610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107545\|ref\|XP_008453730.1\|	1.2e-58	74.85	PREDICTED: transmembrane protein 97-like [Cucumis melo]	[more]
gi\|449462890\|ref\|XP_004149168.1\|	6.1e-58	73.05	PREDICTED: transmembrane protein 97 [Cucumis sativus]	[more]
gi\|449453494\|ref\|XP_004144492.1\|	8.3e-39	55.69	PREDICTED: transmembrane protein 97-like [Cucumis sativus]	[more]
gi\|595927259\|ref\|XP_007215075.1\|	1.9e-38	55.69	hypothetical protein PRUPE_ppa012485mg [Prunus persica]	[more]
gi\|659111037\|ref\|XP_008455545.1\|	5.4e-38	55.21	PREDICTED: uncharacterized protein LOC103495696, partial [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016964	Sigma2_recept

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g01610.1	Cp4.1LG14g01610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Transmembrane protein 97	PIR	PIRSF031032	TMP_97	coord: 1..149 score: 1.5
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 1..160 score: 7.4
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..134 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG14g01610	Cucsa.201310	Cucumber (Gy14) v1	cgycpeB0567
Cp4.1LG14g01610	CmaCh16G006540	Cucurbita maxima (Rimu)	cmacpeB344
Cp4.1LG14g01610	CmoCh16G007110	Cucurbita moschata (Rifu)	cmocpeB307
Cp4.1LG14g01610	Cla014531	Watermelon (97103) v1	cpewmB218
Cp4.1LG14g01610	Csa4G038780	Cucumber (Chinese Long) v2	cpecuB221
Cp4.1LG14g01610	MELO3C017552	Melon (DHL92) v3.5.1	cpemeB196
Cp4.1LG14g01610	ClCG07G009050	Watermelon (Charleston Gray)	cpewcgB210
Cp4.1LG14g01610	CSPI04G05040	Wild cucumber (PI 183967)	cpecpiB223
Cp4.1LG14g01610	Lsi07G002130	Bottle gourd (USVL1VR-Ls)	cpelsiB185
Cp4.1LG14g01610	MELO3C017552.2	Melon (DHL92) v3.6.1	cpemedB238
Cp4.1LG14g01610	CsaV3_4G005160	Cucumber (Chinese Long) v3	cpecucB0266
Cp4.1LG14g01610	Carg05772	Silver-seed gourd	carcpeB1414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG14g01610	Cucurbita maxima (Rimu)	cmacpeB714
Cp4.1LG14g01610	Cucurbita moschata (Rifu)	cmocpeB667
Cp4.1LG14g01610	Watermelon (97103) v1	cpewmB232
Cp4.1LG14g01610	Cucumber (Gy14) v2	cgybcpeB487
Cp4.1LG14g01610	Silver-seed gourd	carcpeB1301
Cp4.1LG14g01610	Wax gourd	cpewgoB0289
Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpecpeB065
Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpecpeB237
Cp4.1LG14g01610	Cucurbita pepo (Zucchini)	cpecpeB239