CmaCh16G006540 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAAGTCAACGTCTCTCCCAGATCTGTGTAAGGTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGGTATATTCTACTTCTCTCCTACCATCATGTGATTGATGAATTTCTATAATTGCCCACATATTCTCCTTCTCCAACTTTCTCTTTTCCTAACCGGGAATTCCGATGTGGGATCCACAATCCACTCCTTTTGGAGTCAACGTCCTAACTGGTACTCGTTCTTTTTGGAACCCAACGTCCTATTCTGGCACATCACCTTGTGTTCACCCCTGCCACTTATTTCTTTCTCTAATCAACGTGAGACTCCCAATCCACTCCCTTTCGGAGTGATACACCACCTTGTGTCCACCCTTTTCGGGGCTCAGCCTCCCCACTGGCACATCCTCCGTGTTTGCCTCTGATATCACTTGCAACCGCTCAAGCCCGCCATTAACAAATAATATCTTCTTTGAATTTTTCTTTTTGAATTTTTTCTCAAATTTTAAAAATGTATTTACTAGGGAAAGGTTTTCAGGCTCCTAAATAAATGTTTGTTTTCCTCTCCAACGGATGGTTGTAAATGAATAAGCCTATTTTAGGTTCTTTTTTCAGGTTGCTATAGCAGCTGAATTGATAGGGTCACAGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA GAGAAGTCAACGTCTCTCCCAGATCTGTGTAAGGTGAAGCAATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA ATGGGGGTTCTTCTGAAGCTCTTCGATTCAGTTCTATTTGTGTCCTTATTTGTACATGCCATGGCGCCGCCGCTCATCGGCGCCCAGTTATTGCTCCCCGGAGCCCTTTTCCCCGATGTTCTTGTTGATTTCAAGGAGCTGTACGTTCGACTGTCGGGAGACTATCTGATGGCCGAGGCGCCTCCCTTTTTCGTCGGCCTGCTTTGGCTGGAGCTTCTCCTTCAATGGCCGCTCACGGTTTTCAACCTCTACGCCATCTGGGCTGCAAAGTCATGGCTGCACACCACCTGTTTGATCTATGGCGTCTCCCTTTTCACTGCTATGAGGGCATCTGGACTGCTGTTGAAACTGTATCTCCCTTTCTTGGGTTTGGGAGTTTTAGCCACGCTACGTGGGCTGCTGCCGCGTTGCAGCAAGGCTACGCCCACCGGCCACGACGTTGGACCATCAATTGCCGGCAAAAAGAAGGTTTGA MGVLLKLFDSVLFVSLFVHAMAPPLIGAQLLLPGALFPDVLVDFKELYVRLSGDYLMAEAPPFFVGLLWLELLLQWPLTVFNLYAIWAAKSWLHTTCLIYGVSLFTAMRASGLLLKLYLPFLGLGVLATLRGLLPRCSKATPTGHDVGPSIAGKKKV
BLAST of CmaCh16G006540 vs. TrEMBL
Match: A0A0A0KZE5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038780 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.3e-55 Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TrEMBL
Match: M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.6e-38 Identity = 95/167 (56.89%), Postives = 114/167 (68.26%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TrEMBL
Match: A0A151S0C1_CAJCA (Transmembrane protein 97 OS=Cajanus cajan GN=KK1_030032 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 5.9e-36 Identity = 87/156 (55.77%), Postives = 108/156 (69.23%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TrEMBL
Match: A0A0A0K5K2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044230 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35 Identity = 90/167 (53.89%), Postives = 108/167 (64.67%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TrEMBL
Match: A0A067JPF0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22871 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.9e-34 Identity = 82/168 (48.81%), Postives = 110/168 (65.48%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TAIR10
Match: AT2G32380.1 (AT2G32380.1 Transmembrane protein 97, predicted) HSP 1 Score: 131.0 bits (328), Expect = 6.6e-31 Identity = 77/169 (45.56%), Postives = 105/169 (62.13%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TAIR10
Match: AT1G05210.1 (AT1G05210.1 Transmembrane protein 97, predicted) HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30 Identity = 74/152 (48.68%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of CmaCh16G006540 vs. TAIR10
Match: AT1G05220.1 (AT1G05220.1 Transmembrane protein 97, predicted) HSP 1 Score: 104.8 bits (260), Expect = 5.1e-23 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 1
BLAST of CmaCh16G006540 vs. NCBI nr
Match: gi|659107545|ref|XP_008453730.1| (PREDICTED: transmembrane protein 97-like [Cucumis melo]) HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55 Identity = 119/167 (71.26%), Postives = 129/167 (77.25%), Query Frame = 1
BLAST of CmaCh16G006540 vs. NCBI nr
Match: gi|449462890|ref|XP_004149168.1| (PREDICTED: transmembrane protein 97 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 4.7e-55 Identity = 116/167 (69.46%), Postives = 130/167 (77.84%), Query Frame = 1
BLAST of CmaCh16G006540 vs. NCBI nr
Match: gi|595927259|ref|XP_007215075.1| (hypothetical protein PRUPE_ppa012485mg [Prunus persica]) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38 Identity = 95/167 (56.89%), Postives = 114/167 (68.26%), Query Frame = 1
BLAST of CmaCh16G006540 vs. NCBI nr
Match: gi|645247952|ref|XP_008230078.1| (PREDICTED: uncharacterized protein LOC103329393 [Prunus mume]) HSP 1 Score: 163.3 bits (412), Expect = 3.4e-37 Identity = 94/167 (56.29%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of CmaCh16G006540 vs. NCBI nr
Match: gi|658013398|ref|XP_008341994.1| (PREDICTED: uncharacterized protein LOC103404806 [Malus domestica]) HSP 1 Score: 160.2 bits (404), Expect = 2.9e-36 Identity = 91/167 (54.49%), Postives = 109/167 (65.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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