CsaV3_3G013300 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G013300
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	preprotein translocase subunit SECE1
Location	chr3 : 10081443 .. 10081982 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCAGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

mRNA sequence

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCAGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Coding sequence (CDS)

ATGGCCGTTCCGATTTCCCTGAAATTTCCGACGGTTCCATCCACTTTAACCAACAGAACCGCCTCCTTGTTCGTACCACTACGGCGGAGCTCCCCTCATCATTCTCATCCTCACTCACAACATACGATCAGATTCCCAACGATTAGATCCAACAGAAACGTTAAGTTCTCCGCCGTCAATGCTGTGCAGGAAAGCCAAGAGAATACAGAATCCGACGGTGTGGAGGTTCAAGCAGGGCCACCAACGGAGGAGCCGAAAACGGCCGACCAATCAGCAGAATCCGGCGCGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCAAAAGGTGGAGAAAGAAGGGGACCTGATCGGCGGAGTGGCGGAGGAGATTAAAGAGATTGAATGGCCAGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTAGTGATCGGCGTTATTGCTGGCTCTAGTGTCGTTCTGCTCACTGTGAATGCCTTATTGGCAGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAAGATTTCTTTAGTTGA

Protein sequence

MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS

Homology

[Close]

BLAST of CsaV3_3G013300 vs. NCBI nr
Match: XP_004134136.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical protein Csa_3G146680 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 6.6e-89
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CsaV3_3G013300 vs. NCBI nr
Match: XP_008438678.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 7.5e-85
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVP LR+SS HHSHPHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CsaV3_3G013300 vs. NCBI nr
Match: XP_022979428.1 (preprotein translocase subunit SECE1 [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 4.9e-76
Identity = 159/179 (88.83%), Postives = 165/179 (92.18%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FP VPSTLT+R ASLFV LRRSS H SHPHS  TIR P +RS RN KFSAVN
Sbjct: 1   MAVPISLRFPAVPSTLTDRAASLFVSLRRSSSHRSHPHSHRTIRLPGVRSRRNSKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CsaV3_3G013300 vs. NCBI nr
Match: XP_023528201.1 (preprotein translocase subunit SECE1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 1.9e-75
Identity = 159/179 (88.83%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FPTVPSTLTNR ASLFV LRRSS +HSHPH   TIR P IRS RN  FSAVN
Sbjct: 1   MAVPISLRFPTVPSTLTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CsaV3_3G013300 vs. NCBI nr
Match: XP_022956080.1 (preprotein translocase subunit SECE1 [Cucurbita moschata])

HSP 1 Score: 290.0 bits (741), Expect = 5.4e-75
Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISL+FPTVPST TNR ASLFV LRRSS +HSHPH   TIR P IRS RN  FSAVN
Sbjct: 1   MAVPISLRFPTVPSTFTNRAASLFVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPP EE KTADQ AESG NLGAEIQEALKQ+KVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEI++IEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CsaV3_3G013300 vs. TAIR10
Match: AT4G14870.1 (secE/sec61-gamma protein transport protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-27
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 98  LGAEIQEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVV 157
           +GAEI+ A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVV
Sbjct: 92  IGAEIKAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVV 151

Query: 158 LLTVNALLAELSDRVFAGKGVQDFFS 180
           LLTVN LLAELSDRVF G+GVQDFFS
Sbjct: 152 LLTVNFLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of CsaV3_3G013300 vs. Swiss-Prot
Match: sp|O23342|SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26
Identity = 62/86 (72.09%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 98  LGAEIQEALKQQKVEKE----GDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVV 157
           +GAEI+ A++Q+K  +E     + + GVAEE+KEIEWPAF+KVLGTTGVV+GVIAGSSVV
Sbjct: 92  IGAEIKAAMEQRKTAEEEKGKNEFLSGVAEEVKEIEWPAFQKVLGTTGVVLGVIAGSSVV 151

Query: 158 LLTVNALLAELSDRVFAGKGVQDFFS 180
           LLTVN LLAELSDRVF G+GVQDFFS
Sbjct: 152 LLTVNFLLAELSDRVFIGRGVQDFFS 177

[Close]

BLAST of CsaV3_3G013300 vs. TrEMBL
Match: tr|A0A0A0L5J0|A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.3e-89
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60

Query: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120
           AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG
Sbjct: 61  AVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGG 120

Query: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 VAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 179

[Close]

BLAST of CsaV3_3G013300 vs. TrEMBL
Match: tr|A0A1S3AWM4|A0A1S3AWM4_CUCME (preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.0e-85
Identity = 174/180 (96.67%), Postives = 177/180 (98.33%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVP-LRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAV 60
           MAVPISLKFPTVPSTLTNRTASLFVP LR+SS HHSHPHSQHTIR PTIRSNRN+KFSAV
Sbjct: 1   MAVPISLKFPTVPSTLTNRTASLFVPLLRQSSTHHSHPHSQHTIRLPTIRSNRNIKFSAV 60

Query: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIG 120
           NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQ+KVEKEGDLIG
Sbjct: 61  NAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQRKVEKEGDLIG 120

Query: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
Sbjct: 121 GVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180

[Close]

BLAST of CsaV3_3G013300 vs. TrEMBL
Match: tr|A0A2I4GEY0|A0A2I4GEY0_9ROSI (preprotein translocase subunit SECE1 OS=Juglans regia OX=51240 GN=LOC109007286 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.6e-30
Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSP----HH--SHPHSQHTIRFPTIRSNRNV 60
           MAVP+S++F    + LT R     +   R  P     H  SHP  +      T R NR++
Sbjct: 1   MAVPMSVQFSAASTFLTPRKTGHPLSQVRFKPPPVGRHLLSHPKQRTLAITRTQRRNRSL 60

Query: 61  KFSAVNAVQESQENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVE-- 120
               +NA  E++E+ E++ V  Q  PP  EP    Q+ +S A LG++I+EA++Q+K E  
Sbjct: 61  ---TINAADETRESPEAETVSNQDSPP--EP--GIQATKSSAELGSQIKEAMRQRKEEEA 120

Query: 121 KEGDLIGGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGK 179
           ++G    GVAEEI+EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAELSDRVFAG+
Sbjct: 121 RDGGFWSGVAEEIREIEWPAFGKVLGTTGVVLGVIAGSSVVLLTVNAVLAELSDRVFAGR 179

[Close]

BLAST of CsaV3_3G013300 vs. TrEMBL
Match: tr|A0A2C9WA35|A0A2C9WA35_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G178200 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.0e-29
Identity = 91/174 (52.30%), Postives = 113/174 (64.94%), Query Frame = 0


Query: 6   SLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVNAVQES 65
           SLK P  P  L  +T     PL+   P         + +  T  S R        AV+ES
Sbjct: 7   SLKLPLTPQLL--KTTQSNPPLKFKQPPVCSSTLFFSSKISTANSKRRNVVFVTRAVEES 66

Query: 66  QENTESDGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLIGGVAEEI 125
           QE+ ES           +E ++ D+S+   ++LGAEIQ+A+K  K EKEG+L+ GVAEEI
Sbjct: 67  QESVESQ--------VAKEEQSLDESSVEVSDLGAEIQKAMK--KEEKEGNLLVGVAEEI 126

Query: 126 KEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS 180
           +EIEWPAF KVLGTTGVVIGVIAGSS+VLLTVNA+LAELSD+VFAG+G QDFFS
Sbjct: 127 QEIEWPAFGKVLGTTGVVIGVIAGSSLVLLTVNAVLAELSDKVFAGRGFQDFFS 168

[Close]

BLAST of CsaV3_3G013300 vs. TrEMBL
Match: tr|M5Y5G6|M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G014400 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 87/181 (48.07%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 1   MAVPISLKFPTVPSTLTNRTASLFVPLRRSSPHHSHPHSQHTIRFPTIRSNRNVKFSAVN 60
           MA+ +S++FP  P+ L            R  P  +  HS    +     ++   K S + 
Sbjct: 1   MALRMSVQFPITPTFLLPTKGGHVNSSVRLKPPCACNHSVSQFQPRRPLTDPRSKQSLLK 60

Query: 61  AVQESQENTES--DGVEVQAGPPTEEPKTADQSAESGANLGAEIQEALKQQKVEKEGDLI 120
           AV ESQ N+ES  + V  Q      + ++A       + LG EI+EA++++K EK+GD +
Sbjct: 61  AVDESQANSESGPESVSTQQKESAGDGESAASQPVELSELGKEIKEAMQKRKEEKDGDFL 120

Query: 121 GGVAEEIKEIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFF 180
            GVA+E++EIEWPAF KVLGTTGVV+GVIAGSSVVLLTVNA+LAE SD+VFAGKGVQDFF
Sbjct: 121 SGVADEVREIEWPAFAKVLGTTGVVLGVIAGSSVVLLTVNAVLAEFSDQVFAGKGVQDFF 180

The following BLAST results are available for this feature:

BLAST of CsaV3_3G013300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134136.1	6.6e-89	100.00	PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hy...	[more]
XP_008438678.1	7.5e-85	96.67	PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]	[more]
XP_022979428.1	4.9e-76	88.83	preprotein translocase subunit SECE1 [Cucurbita maxima]	[more]
XP_023528201.1	1.9e-75	88.83	preprotein translocase subunit SECE1 [Cucurbita pepo subsp. pepo]	[more]
XP_022956080.1	5.4e-75	88.27	preprotein translocase subunit SECE1 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G013300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14870.1	3.0e-27	72.09	secE/sec61-gamma protein transport protein	[more]

BLAST of CsaV3_3G013300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23342\|SECE1_ARATH	5.4e-26	72.09	Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE...	[more]

BLAST of CsaV3_3G013300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5J0\|A0A0A0L5J0_CUCSA	4.3e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1	[more]
tr\|A0A1S3AWM4\|A0A1S3AWM4_CUCME	5.0e-85	96.67	preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=...	[more]
tr\|A0A2I4GEY0\|A0A2I4GEY0_9ROSI	4.6e-30	51.61	preprotein translocase subunit SECE1 OS=Juglans regia OX=51240 GN=LOC109007286 P...	[more]
tr\|A0A2C9WA35\|A0A2C9WA35_MANES	3.0e-29	52.30	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G178200 PE=4 SV=...	[more]
tr\|M5Y5G6\|M5Y5G6_PRUPE	1.5e-28	48.07	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G014400 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006605	protein targeting
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR001901	Translocase_SecE/Sec61-g

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006605	protein targeting
biological_process	GO:0009306	protein secretion
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016020	membrane
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G013300.1	CsaV3_3G013300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001901	Protein translocase complex, SecE/Sec61-gamma subunit	PFAM	PF00584	SecE	coord: 118..164 e-value: 4.2E-5 score: 23.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..94
None	No IPR available	PANTHER	PTHR37240	FAMILY NOT NAMED	coord: 5..179

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G013300	CSPI03G13130	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G013300	Cucsa.254300	Cucumber (Gy14) v1	cgycucB387
CsaV3_3G013300	CmaCh14G017070	Cucurbita maxima (Rimu)	cmacucB0291
CsaV3_3G013300	CmoCh14G017500	Cucurbita moschata (Rifu)	cmocucB0283
CsaV3_3G013300	Cp4.1LG03g10590	Cucurbita pepo (Zucchini)	cpecucB0759
CsaV3_3G013300	CsGy3G013280	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G013300	Carg23521	Silver-seed gourd	carcucB0889
CsaV3_3G013300	Cla021626	Watermelon (97103) v1	cucwmB239
CsaV3_3G013300	MELO3C006532	Melon (DHL92) v3.5.1	cucmeB236
CsaV3_3G013300	Lsi05G016040	Bottle gourd (USVL1VR-Ls)	cuclsiB228
CsaV3_3G013300	MELO3C006532.2	Melon (DHL92) v3.6.1	cucmedB230
CsaV3_3G013300	Cla97C05G086350	Watermelon (97103) v2	cucwmbB206
CsaV3_3G013300	Bhi01G000585	Wax gourd	cucwgoB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G013300	Silver-seed gourd	carcucB0078
CsaV3_3G013300	Silver-seed gourd	carcucB0355
CsaV3_3G013300	Silver-seed gourd	carcucB0640
CsaV3_3G013300	Cucurbita maxima (Rimu)	cmacucB0425
CsaV3_3G013300	Cucurbita maxima (Rimu)	cmacucB0431
CsaV3_3G013300	Cucurbita maxima (Rimu)	cmacucB0965
CsaV3_3G013300	Cucurbita maxima (Rimu)	cmacucB1051
CsaV3_3G013300	Cucurbita maxima (Rimu)	cmacucB1049
CsaV3_3G013300	Cucurbita moschata (Rifu)	cmocucB0420
CsaV3_3G013300	Cucurbita moschata (Rifu)	cmocucB0426
CsaV3_3G013300	Cucurbita moschata (Rifu)	cmocucB0953
CsaV3_3G013300	Cucurbita moschata (Rifu)	cmocucB1032
CsaV3_3G013300	Cucurbita moschata (Rifu)	cmocucB1035
CsaV3_3G013300	Cucurbita pepo (Zucchini)	cpecucB0159
CsaV3_3G013300	Cucurbita pepo (Zucchini)	cpecucB0385
CsaV3_3G013300	Cucurbita pepo (Zucchini)	cpecucB0388
CsaV3_3G013300	Cucurbita pepo (Zucchini)	cpecucB1056
CsaV3_3G013300	Bottle gourd (USVL1VR-Ls)	cuclsiB163
CsaV3_3G013300	Bottle gourd (USVL1VR-Ls)	cuclsiB189
CsaV3_3G013300	Melon (DHL92) v3.5.1	cucmeB187
CsaV3_3G013300	Melon (DHL92) v3.6.1	cucmedB179
CsaV3_3G013300	Watermelon (Charleston Gray)	cucwcgB189
CsaV3_3G013300	Watermelon (Charleston Gray)	cucwcgB225
CsaV3_3G013300	Watermelon (Charleston Gray)	cucwcgB254
CsaV3_3G013300	Watermelon (97103) v1	cucwmB200
CsaV3_3G013300	Watermelon (97103) v1	cucwmB288
CsaV3_3G013300	Watermelon (97103) v2	cucwmbB233
CsaV3_3G013300	Watermelon (97103) v2	cucwmbB261
CsaV3_3G013300	Wax gourd	cucwgoB255