Carg23521 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGCTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAATCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGCTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAATCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA ATGGCCGTTCCGATCTCCCTGCGATTTCCGACGGTACCTTCCACTTTAACTAACAGAGCGGCCTCCTTGCTTGTATCACTACGGCGGAGCTCCGCGTATCATTCTCATCCTCACTTACATCGCACGATCAGACTCCCGGGGATTAGGTCTAGAAGGAATAGCATGTTCTCCGCTGTCAATGCCGTGCAGGAAAGCCAAGAGAATACAGAATCTGATGGGGTGGAGGTTCAAGCTGGGCCGCCGAGGGAGGAATCGAAAACGGCTGATCAACCGGCAGAATCTGGCGAGAATTTGGGCGCCGAAATTCAGGAGGCTTTGAAGCAGCGGAAGGTGGAGAAAGAGGGGGACCTGATTGGGGGAGTGGCGGAGGAGATTCAGAAGATTGAGTGGCCGGCGTTTCGAAAGGTTTTGGGCACGACGGGGGTGGTGATCGGCGTTATTGCTGGTTCTAGTGTCGTTTTGCTCACTGTGAATGCCTTACTGGCGGAGCTGTCCGATCGAGTTTTCGCCGGAAAAGGAGTTCAGGATTTCTTTAGCTGA MAVPISLRFPTVPSTLTNRAASLLVSLRRSSAYHSHPHLHRTIRLPGIRSRRNSMFSAVNAVQESQENTESDGVEVQAGPPREESKTADQPAESGENLGAEIQEALKQRKVEKEGDLIGGVAEEIQKIEWPAFRKVLGTTGVVIGVIAGSSVVLLTVNALLAELSDRVFAGKGVQDFFS
BLAST of Carg23521 vs. NCBI nr
Match: XP_023528201.1 (preprotein translocase subunit SECE1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 330.5 bits (846), Expect = 3.6e-87 Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0
BLAST of Carg23521 vs. NCBI nr
Match: XP_022956080.1 (preprotein translocase subunit SECE1 [Cucurbita moschata]) HSP 1 Score: 328.9 bits (842), Expect = 1.0e-86 Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0
BLAST of Carg23521 vs. NCBI nr
Match: XP_022979428.1 (preprotein translocase subunit SECE1 [Cucurbita maxima]) HSP 1 Score: 313.2 bits (801), Expect = 5.9e-82 Identity = 169/179 (94.41%), Postives = 173/179 (96.65%), Query Frame = 0
BLAST of Carg23521 vs. NCBI nr
Match: XP_004134136.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis sativus] >KGN56983.1 hypothetical protein Csa_3G146680 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 9.1e-75 Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0
BLAST of Carg23521 vs. NCBI nr
Match: XP_008438678.1 (PREDICTED: preprotein translocase subunit SECE1 [Cucumis melo]) HSP 1 Score: 286.6 bits (732), Expect = 5.9e-74 Identity = 159/180 (88.33%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Carg23521 vs. TAIR10
Match: AT4G14870.1 (secE/sec61-gamma protein transport protein) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26 Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Carg23521 vs. Swiss-Prot
Match: sp|O23342|SECE1_ARATH (Preprotein translocase subunit SECE1 OS=Arabidopsis thaliana OX=3702 GN=SECE1 PE=1 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.0e-25 Identity = 61/86 (70.93%), Postives = 74/86 (86.05%), Query Frame = 0
BLAST of Carg23521 vs. TrEMBL
Match: tr|A0A0A0L5J0|A0A0A0L5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146680 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 6.0e-75 Identity = 158/179 (88.27%), Postives = 163/179 (91.06%), Query Frame = 0
BLAST of Carg23521 vs. TrEMBL
Match: tr|A0A1S3AWM4|A0A1S3AWM4_CUCME (preprotein translocase subunit SECE1 OS=Cucumis melo OX=3656 GN=LOC103483711 PE=4 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 3.9e-74 Identity = 159/180 (88.33%), Postives = 164/180 (91.11%), Query Frame = 0
BLAST of Carg23521 vs. TrEMBL
Match: tr|A0A2I4GEY0|A0A2I4GEY0_9ROSI (preprotein translocase subunit SECE1 OS=Juglans regia OX=51240 GN=LOC109007286 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.5e-29 Identity = 92/186 (49.46%), Postives = 122/186 (65.59%), Query Frame = 0
BLAST of Carg23521 vs. TrEMBL
Match: tr|M5Y5G6|M5Y5G6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G014400 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28 Identity = 93/186 (50.00%), Postives = 120/186 (64.52%), Query Frame = 0
BLAST of Carg23521 vs. TrEMBL
Match: tr|A0A2P6P507|A0A2P6P507_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190521 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.2e-28 Identity = 91/183 (49.73%), Postives = 120/183 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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